Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382950 | AES73712.2 | 91.040 | 346 | 17 | 4 | 12 | 344 | 3 | 347 | 0.0 | 625 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382950 | sp|Q2RQW1|RL4_RHORT | 48.276 | 203 | 96 | 2 | 140 | 334 | 5 | 206 | 5.38e-54 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382950 | G7JBP6 | 91.040 | 346 | 17 | 4 | 12 | 344 | 3 | 347 | 0.0 | 625 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0087910 | Msa0382950 | 0.827333 | 1.657355e-54 | -8.615850e-47 |
| Msa0114600 | Msa0382950 | 0.837795 | 4.210803e-57 | -8.615850e-47 |
| Msa0134580 | Msa0382950 | 0.822808 | 1.942723e-53 | -8.615850e-47 |
| Msa0192490 | Msa0382950 | 0.802536 | 5.355035e-49 | -8.615850e-47 |
| Msa0223240 | Msa0382950 | 0.811806 | 5.823964e-51 | -8.615850e-47 |
| Msa0223950 | Msa0382950 | 0.830297 | 3.179273e-55 | -8.615850e-47 |
| Msa0382950 | Msa0382960 | 0.892139 | 2.090515e-74 | -8.615850e-47 |
| Msa0382950 | Msa0432750 | 0.910652 | 1.474713e-82 | -8.615850e-47 |
| Msa0382950 | Msa0479980 | 0.915885 | 3.457523e-85 | -8.615850e-47 |
| Msa0382950 | Msa0547920 | 0.823429 | 1.391694e-53 | -8.615850e-47 |
| Msa0382950 | Msa0554210 | 0.834646 | 2.658121e-56 | -8.615850e-47 |
| Msa0382950 | Msa0602900 | 0.808177 | 3.520171e-50 | -8.615850e-47 |
| Msa0382950 | Msa0643960 | 0.814190 | 1.747999e-51 | -8.615850e-47 |
| Msa0382950 | Msa0777560 | 0.816969 | 4.203168e-52 | -8.615850e-47 |
| Msa0382950 | Msa0814620 | 0.816280 | 5.997403e-52 | -8.615850e-47 |
| Msa0382950 | Msa1050100 | 0.805574 | 1.250182e-49 | -8.615850e-47 |
| Msa0382950 | Msa1124850 | 0.813864 | 2.062991e-51 | -8.615850e-47 |
| Msa0382950 | Msa1219760 | 0.817527 | 3.148223e-52 | -8.615850e-47 |
| Msa0382950 | Msa1333370 | 0.801343 | 9.415038e-49 | -8.615850e-47 |
| Msa0382950 | Msa1341780 | 0.845618 | 3.629020e-59 | -8.615850e-47 |
| Msa0382950 | Msa1371410 | 0.911749 | 4.275902e-83 | -8.615850e-47 |
| Msa0382950 | Msa1415620 | 0.909713 | 4.198879e-82 | -8.615850e-47 |
| Msa0265200 | Msa0382950 | 0.827974 | 1.163266e-54 | -8.615850e-47 |
| Msa0277600 | Msa0382950 | 0.841825 | 3.757140e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382950 | MtrunA17_Chr3g0138321 | 94.333 | 300 | 6 | 2 | 56 | 344 | 1 | 300 | 0.0 | 574 |
| Msa0382950 | MtrunA17_Chr8g0335501 | 34.615 | 208 | 120 | 4 | 133 | 327 | 50 | 254 | 1.22e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382950 | AT2G20060.1 | 64.379 | 306 | 79 | 5 | 56 | 338 | 1 | 299 | 2.87e-136 | 389 |
| Msa0382950 | AT1G07320.4 | 30.357 | 224 | 128 | 5 | 121 | 327 | 43 | 255 | 4.63e-20 | 89.0 |
| Msa0382950 | AT1G07320.3 | 30.357 | 224 | 128 | 5 | 121 | 327 | 43 | 255 | 4.63e-20 | 89.0 |
| Msa0382950 | AT1G07320.2 | 30.357 | 224 | 128 | 5 | 121 | 327 | 43 | 255 | 4.98e-20 | 89.0 |
| Msa0382950 | AT1G07320.1 | 30.357 | 224 | 128 | 5 | 121 | 327 | 43 | 255 | 5.13e-20 | 89.0 |
Find 89 sgRNAs with CRISPR-Local
Find 503 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTACCTCAACCATTTATT+TGG | 0.072403 | 3_1:-85738822 | None:intergenic |
| CAACGAAGACAAGGGCTTTA+TGG | 0.163918 | 3_1:+85733537 | Msa0382950:CDS |
| CCCAGTGCTGCTGGGTTATA+TGG | 0.172532 | 3_1:+85732615 | Msa0382950:CDS |
| TTATTTGGGTGTGGATTTAT+TGG | 0.194249 | 3_1:-85738807 | None:intergenic |
| TGTTTCGGAGAGATGGGTTT+TGG | 0.215248 | 3_1:-85732248 | None:intergenic |
| GCTTCTAGTGTTTGAGGATT+TGG | 0.223422 | 3_1:+85737810 | Msa0382950:intron |
| CAAGATTAAAACTTAGGATT+TGG | 0.270503 | 3_1:+85738996 | Msa0382950:three_prime_UTR |
| CTCAAATGGTTAAGTTGTTA+TGG | 0.283472 | 3_1:+85739036 | Msa0382950:three_prime_UTR |
| TAAATCCACACCCAAATAAA+TGG | 0.297256 | 3_1:+85738811 | Msa0382950:exon |
| AATTCTGTTCACAGCATCTT+TGG | 0.299153 | 3_1:-85738759 | None:intergenic |
| TTTGATTCACCCAGTGCTGC+TGG | 0.304551 | 3_1:+85732606 | Msa0382950:CDS |
| TTGCTCGACCAGTTCCCTTT+TGG | 0.310177 | 3_1:-85734571 | None:intergenic |
| ATCTACGATCAGAAGTTTCT+TGG | 0.323553 | 3_1:-85737890 | None:intergenic |
| ATAAGAAAGAAGTAGCCTTT+TGG | 0.327708 | 3_1:-85732562 | None:intergenic |
| TCGTTGTGAAAGTTGGTAAC+TGG | 0.350576 | 3_1:-85733520 | None:intergenic |
| GTAGGTTGATTCTTCAGTTA+TGG | 0.350673 | 3_1:+85732527 | Msa0382950:intron |
| CCAGTGCTGCTGGGTTATAT+GGG | 0.354877 | 3_1:+85732616 | Msa0382950:CDS |
| ATTAGTGAGGTCAGTGGGAC+TGG | 0.362388 | 3_1:+85734533 | Msa0382950:CDS |
| TATACAGCTTCTAGTGTTTG+AGG | 0.367365 | 3_1:+85737804 | Msa0382950:intron |
| AACTTCATTTACTCAGGATT+AGG | 0.367891 | 3_1:+85738860 | Msa0382950:three_prime_UTR |
| CCCATATAACCCAGCAGCAC+TGG | 0.368405 | 3_1:-85732616 | None:intergenic |
| ACTTCTTTCTTATCAATCCT+TGG | 0.378210 | 3_1:+85732572 | Msa0382950:CDS |
| GGTGTGGATTTATTGGAGAT+TGG | 0.392265 | 3_1:-85738800 | None:intergenic |
| ACTACCTCAACCATTTATTT+GGG | 0.392940 | 3_1:-85738821 | None:intergenic |
| GAGTTTGAAAGCGTGACTTC+GGG | 0.393295 | 3_1:-85734744 | None:intergenic |
| GAGAACCAACAGGTTTGTTT+CGG | 0.394983 | 3_1:-85732263 | None:intergenic |
| GCAACATCTGAGCGTGATAT+AGG | 0.405707 | 3_1:+85732838 | Msa0382950:CDS |
| AAAGCGTGACTTCGGGGCTT+AGG | 0.410919 | 3_1:-85734737 | None:intergenic |
| CTCAAGCAAAATATTCTCAT+TGG | 0.412421 | 3_1:-85738922 | None:intergenic |
| TGGGTCATTGCGTGGGCCTC+AGG | 0.414756 | 3_1:+85734598 | Msa0382950:CDS |
| TTGTTTCAAGATTAAAACTT+AGG | 0.418739 | 3_1:+85738990 | Msa0382950:three_prime_UTR |
| CATTTCTGCTCACCGTATCT+TGG | 0.423638 | 3_1:+85732647 | Msa0382950:CDS |
| GGTTTCTGATAAAATTATAC+AGG | 0.430088 | 3_1:+85738944 | Msa0382950:three_prime_UTR |
| CAATAAGAAGGTTCGGCGAC+TGG | 0.432512 | 3_1:+85734766 | Msa0382950:CDS |
| CAGGTTTGTTTCGGAGAGAT+GGG | 0.433251 | 3_1:-85732254 | None:intergenic |
| CTCAACCATTTATTTGGGTG+TGG | 0.441163 | 3_1:-85738816 | None:intergenic |
| TTATGCTGCAGGGCTCTGTC+AGG | 0.442320 | 3_1:+85733486 | Msa0382950:intron |
| GAGAAAGCCTTGGAACCAAA+AGG | 0.454529 | 3_1:+85734556 | Msa0382950:CDS |
| TCTAGTGTTTGAGGATTTGG+AGG | 0.457747 | 3_1:+85737813 | Msa0382950:intron |
| GAAACAAACCTGTTGGTTCT+CGG | 0.461567 | 3_1:+85732265 | Msa0382950:CDS |
| TGAGTTTGAAAGCGTGACTT+CGG | 0.462197 | 3_1:-85734745 | None:intergenic |
| ACAGGTTTGTTTCGGAGAGA+TGG | 0.462323 | 3_1:-85732255 | None:intergenic |
| GCAGCGTGCAAAACGCCAAC+AGG | 0.466799 | 3_1:+85733624 | Msa0382950:CDS |
| CTTGTCTTCGTTGTGAAAGT+TGG | 0.471718 | 3_1:-85733527 | None:intergenic |
| TCAAACTCAATAAGAAGGTT+CGG | 0.474336 | 3_1:+85734759 | Msa0382950:CDS |
| CGCTTTCAAACTCAATAAGA+AGG | 0.480982 | 3_1:+85734754 | Msa0382950:CDS |
| CAGTAGAAGTAGAAAAGCGT+TGG | 0.484013 | 3_1:-85732771 | None:intergenic |
| TGAACTATATCCTTCCGAAT+AGG | 0.487787 | 3_1:-85733586 | None:intergenic |
| CCTTGGAACCAAAAGGGAAC+TGG | 0.491414 | 3_1:+85734563 | Msa0382950:CDS |
| TGGCTTCTTTCATCTCCAAA+AGG | 0.496230 | 3_1:+85732547 | Msa0382950:CDS |
| GCAAGGCATGGGTCATTGCG+TGG | 0.496788 | 3_1:+85734590 | Msa0382950:CDS |
| TTGATTCACCCAGTGCTGCT+GGG | 0.499368 | 3_1:+85732607 | Msa0382950:CDS |
| CAAGAGCTCCGAGAACCAAC+AGG | 0.505865 | 3_1:-85732273 | None:intergenic |
| GTACTAAACTTCATTTACTC+AGG | 0.508949 | 3_1:+85738854 | Msa0382950:three_prime_UTR |
| AAACTGATACTTACAATGGA+TGG | 0.519437 | 3_1:-85737976 | None:intergenic |
| CCATATAACCCAGCAGCACT+GGG | 0.532120 | 3_1:-85732615 | None:intergenic |
| ATTAAAACTTAGGATTTGGA+TGG | 0.533638 | 3_1:+85739000 | Msa0382950:three_prime_UTR |
| AATAAGAAGGTTCGGCGACT+GGG | 0.536871 | 3_1:+85734767 | Msa0382950:CDS |
| AAAGCGTTGGGTGATTGATC+CGG | 0.543562 | 3_1:-85732758 | None:intergenic |
| TTAGTGAGGTCAGTGGGACT+GGG | 0.544271 | 3_1:+85734534 | Msa0382950:CDS |
| GTGGGACTGGGAGAAAGCCT+TGG | 0.549232 | 3_1:+85734546 | Msa0382950:CDS |
| CAACTTTCACAACGAAGACA+AGG | 0.552359 | 3_1:+85733528 | Msa0382950:CDS |
| AGAAAGCCTTGGAACCAAAA+GGG | 0.558506 | 3_1:+85734557 | Msa0382950:CDS |
| GGAACTGGTCGAGCAAGGCA+TGG | 0.559028 | 3_1:+85734578 | Msa0382950:CDS |
| TTTCTTATCAATCCTTGGCA+CGG | 0.559499 | 3_1:+85732577 | Msa0382950:CDS |
| GAATGCAATGTACCAAGATA+CGG | 0.566350 | 3_1:-85732659 | None:intergenic |
| CAAGGCATGGGTCATTGCGT+GGG | 0.570939 | 3_1:+85734591 | Msa0382950:CDS |
| AGTAGAAGTAGAAAAGCGTT+GGG | 0.572426 | 3_1:-85732770 | None:intergenic |
| ATCAAAGCAGCGCCGTGCCA+AGG | 0.573221 | 3_1:-85732589 | None:intergenic |
| AAACTATTAGTGAGGTCAGT+GGG | 0.576745 | 3_1:+85734528 | Msa0382950:CDS |
| CACACCCAAATAAATGGTTG+AGG | 0.579840 | 3_1:+85738817 | Msa0382950:exon |
| CAGTGCTGCTGGGTTATATG+GGG | 0.586267 | 3_1:+85732617 | Msa0382950:CDS |
| GAACTGGTCGAGCAAGGCAT+GGG | 0.586611 | 3_1:+85734579 | Msa0382950:CDS |
| AAAAGGGAACTGGTCGAGCA+AGG | 0.599214 | 3_1:+85734573 | Msa0382950:CDS |
| ATCACTGTGTTACAGAAATG+AGG | 0.601606 | 3_1:-85738899 | None:intergenic |
| TCTCTCCGAAACAAACCTGT+TGG | 0.602751 | 3_1:+85732258 | Msa0382950:CDS |
| AAGAGAAGAGAACATAAATG+AGG | 0.610352 | 3_1:-85732316 | None:intergenic |
| GTGTTACAGAAATGAGGACA+TGG | 0.610594 | 3_1:-85738893 | None:intergenic |
| AACTTTCACAACGAAGACAA+GGG | 0.614854 | 3_1:+85733529 | Msa0382950:CDS |
| AATGAATGGCAACAGTTCAG+GGG | 0.626239 | 3_1:+85734695 | Msa0382950:intron |
| AGGGGTGGTGAAGCGAAGCA+TGG | 0.631679 | 3_1:+85734713 | Msa0382950:CDS |
| TGTTACAGAAATGAGGACAT+GGG | 0.643485 | 3_1:-85738892 | None:intergenic |
| CACGCTGCCACAAAACAACA+CGG | 0.652436 | 3_1:-85733609 | None:intergenic |
| AAACTTCTGATCGTAGATGA+CGG | 0.659438 | 3_1:+85737895 | Msa0382950:CDS |
| GAATGGCAACAGTTCAGGGG+TGG | 0.663853 | 3_1:+85734698 | Msa0382950:intron |
| GTTACAGAAATGAGGACATG+GGG | 0.672070 | 3_1:-85738891 | None:intergenic |
| AAAACTATTAGTGAGGTCAG+TGG | 0.674538 | 3_1:+85734527 | Msa0382950:CDS |
| AGTTTGAAAGCGTGACTTCG+GGG | 0.691763 | 3_1:-85734743 | None:intergenic |
| TCACGCTCAGATGTTGCGAG+AGG | 0.692190 | 3_1:-85732832 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAATGTGTATTTTTTTTT+AGG | + | chr3_1:85731950-85731969 | Msa0382950:intron | 10.0% |
| !!! | TAAATGTGTATTTTTTTTTA+GGG | + | chr3_1:85731951-85731970 | Msa0382950:intron | 10.0% |
| !!! | TATTTAATTTTTAAGAAAGA+AGG | - | chr3_1:85734868-85734887 | None:intergenic | 10.0% |
| !!! | TTTATAAATTTTCATTTAAC+AGG | - | chr3_1:85735916-85735935 | None:intergenic | 10.0% |
| !! | GTAATTTAAAAAATTATAGT+GGG | - | chr3_1:85736201-85736220 | None:intergenic | 10.0% |
| !!! | CACTATAATTTTTTAAATTA+CGG | + | chr3_1:85736200-85736219 | Msa0382950:intron | 10.0% |
| !! | AATTTCAAATAGAAAATTTA+TGG | - | chr3_1:85736250-85736269 | None:intergenic | 10.0% |
| !!! | TTATTATTTTTCCATATTTT+GGG | - | chr3_1:85737036-85737055 | None:intergenic | 10.0% |
| !!! | ATTATTATTTTTCCATATTT+TGG | - | chr3_1:85737037-85737056 | None:intergenic | 10.0% |
| !! | ACATTCATCTAAAAAATAAT+GGG | - | chr3_1:85731847-85731866 | None:intergenic | 15.0% |
| !! | TATGGTTAATTATAAATACA+CGG | - | chr3_1:85732004-85732023 | None:intergenic | 15.0% |
| !! | ATACATAAAAAAACTAATGT+AGG | + | chr3_1:85732067-85732086 | Msa0382950:intron | 15.0% |
| !!! | TTAGTTATGTTTTTTCTTTA+AGG | - | chr3_1:85732099-85732118 | None:intergenic | 15.0% |
| !! | TTATTTATTTAAATGTAGAC+CGG | + | chr3_1:85732739-85732758 | Msa0382950:intron | 15.0% |
| !! | ACTTAGATATAAATATCTTA+TGG | + | chr3_1:85733066-85733085 | Msa0382950:intron | 15.0% |
| !! | ACAGTTATATTGATATATAT+TGG | + | chr3_1:85733162-85733181 | Msa0382950:intron | 15.0% |
| !! | AAAACTTAGATTTGTATTTA+TGG | - | chr3_1:85733327-85733346 | None:intergenic | 15.0% |
| !! | ATCTAAGTATATTATTAATG+TGG | + | chr3_1:85733459-85733478 | Msa0382950:intron | 15.0% |
| !! | TATGAATATGTGATTATAAA+CGG | + | chr3_1:85735176-85735195 | Msa0382950:intron | 15.0% |
| !!! | GGTATTATAATTTTTTTTTG+AGG | - | chr3_1:85735532-85735551 | None:intergenic | 15.0% |
| !! | TTACAAAAATAAACCAATAT+GGG | - | chr3_1:85735939-85735958 | None:intergenic | 15.0% |
| !! | ATTACAAAAATAAACCAATA+TGG | - | chr3_1:85735940-85735959 | None:intergenic | 15.0% |
| !! | CGTAATTTAAAAAATTATAG+TGG | - | chr3_1:85736202-85736221 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTTATCCTAATA+TGG | + | chr3_1:85736260-85736279 | Msa0382950:intron | 15.0% |
| !! | TAAATTAACTATTCCATATT+AGG | - | chr3_1:85736276-85736295 | None:intergenic | 15.0% |
| !! | AATAACAAAAAGTTAGTTAT+AGG | + | chr3_1:85736566-85736585 | Msa0382950:intron | 15.0% |
| !!! | ATTATCTTAGAATTTTGATT+GGG | - | chr3_1:85736737-85736756 | None:intergenic | 15.0% |
| !!! | TATTATCTTAGAATTTTGAT+TGG | - | chr3_1:85736738-85736757 | None:intergenic | 15.0% |
| !! | ATATGGAAAAATAATAATCT+AGG | + | chr3_1:85737039-85737058 | Msa0382950:intron | 15.0% |
| !!! | ATATAATTTTACAGCAAAAA+AGG | - | chr3_1:85737126-85737145 | None:intergenic | 15.0% |
| !! | AACTCATAAAATAAAGAAAA+AGG | + | chr3_1:85737520-85737539 | Msa0382950:intron | 15.0% |
| !! | ATTATATGTTAAATAAGAGT+CGG | + | chr3_1:85737744-85737763 | Msa0382950:intron | 15.0% |
| !!! | TCTATATTTTGAAATACATT+TGG | - | chr3_1:85738219-85738238 | None:intergenic | 15.0% |
| !! | AAATTATGAATGAAAATATC+CGG | - | chr3_1:85738387-85738406 | None:intergenic | 15.0% |
| !!! | ATAAGATCAACAATATTTTA+AGG | - | chr3_1:85738491-85738510 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACATGTTTTTGT+AGG | + | chr3_1:85738691-85738710 | Msa0382950:intron | 15.0% |
| !!! | TTTTTTAACATGTTTTTGTA+GGG | + | chr3_1:85738692-85738711 | Msa0382950:intron | 15.0% |
| !!! | GATTTGTTTGAAAAATTTGT+AGG | + | chr3_1:85731561-85731580 | Msa0382950:intron | 20.0% |
| !! | GTCTATTTGAATTAAAATCA+TGG | + | chr3_1:85731655-85731674 | Msa0382950:intron | 20.0% |
| !! | TTGAATTAAAATCATGGTTA+TGG | + | chr3_1:85731661-85731680 | Msa0382950:intron | 20.0% |
| !! | CACATTCATCTAAAAAATAA+TGG | - | chr3_1:85731848-85731867 | None:intergenic | 20.0% |
| !! | TGAATAACATGATATATCAA+AGG | - | chr3_1:85731899-85731918 | None:intergenic | 20.0% |
| !!! | GTATGCTTTTTTTTTTTTAC+GGG | - | chr3_1:85732042-85732061 | None:intergenic | 20.0% |
| !!! | CGTATGCTTTTTTTTTTTTA+CGG | - | chr3_1:85732043-85732062 | None:intergenic | 20.0% |
| !!! | TTCCATTTCTATTTTTCATA+CGG | - | chr3_1:85732133-85732152 | None:intergenic | 20.0% |
| !!! | TAAAGGGTTAATACATTTTT+TGG | + | chr3_1:85732199-85732218 | Msa0382950:intron | 20.0% |
| !!! | TAATACATTTTTTGGACAAA+AGG | + | chr3_1:85732207-85732226 | Msa0382950:CDS | 20.0% |
| !!! | AATACATTTTTTGGACAAAA+GGG | + | chr3_1:85732208-85732227 | Msa0382950:CDS | 20.0% |
| !! | AAAATAAATGAATGAGTGAA+GGG | - | chr3_1:85732479-85732498 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATTCAATTGT+AGG | + | chr3_1:85732509-85732528 | Msa0382950:intron | 20.0% |
| !! | GATATTTATATCTAAGTTAC+AGG | - | chr3_1:85733063-85733082 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAACATTGTCAA+AGG | - | chr3_1:85733357-85733376 | None:intergenic | 20.0% |
| !!! | TTTTGGACAATAAATAACTA+AGG | + | chr3_1:85733879-85733898 | Msa0382950:intron | 20.0% |
| !! | ATTGAAACATATACAATTCT+TGG | - | chr3_1:85733927-85733946 | None:intergenic | 20.0% |
| !! | AATTCTTTCATTTGTCAATT+AGG | - | chr3_1:85734034-85734053 | None:intergenic | 20.0% |
| !! | ATAGTCATAGGATATATAAA+GGG | - | chr3_1:85734347-85734366 | None:intergenic | 20.0% |
| !!! | AAACATATTGTTTCATGTTT+TGG | + | chr3_1:85734988-85735007 | Msa0382950:intron | 20.0% |
| !!! | ACAATATTCTTATTTCTTGT+AGG | + | chr3_1:85735043-85735062 | Msa0382950:intron | 20.0% |
| !! | ATGAATATGTGATTATAAAC+GGG | + | chr3_1:85735177-85735196 | Msa0382950:intron | 20.0% |
| !! | ATATACAAATTGCTTTAGTA+TGG | + | chr3_1:85735274-85735293 | Msa0382950:intron | 20.0% |
| !!! | TCTGAAAAATATTTTATGCA+GGG | + | chr3_1:85735341-85735360 | Msa0382950:intron | 20.0% |
| !! | AAATATTAAAGAAAGTAGCT+GGG | - | chr3_1:85735426-85735445 | None:intergenic | 20.0% |
| !! | AAAATATTAAAGAAAGTAGC+TGG | - | chr3_1:85735427-85735446 | None:intergenic | 20.0% |
| !! | ATAATTGTGATTCTTTCAAT+GGG | - | chr3_1:85735559-85735578 | None:intergenic | 20.0% |
| !! | AATAATTGTGATTCTTTCAA+TGG | - | chr3_1:85735560-85735579 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | chr3_1:85735665-85735684 | None:intergenic | 20.0% |
| !! | GAAAATTTATAAACCCATAT+TGG | + | chr3_1:85735923-85735942 | Msa0382950:intron | 20.0% |
| !!! | TTTGTAATTTTTCATGTGAA+AGG | + | chr3_1:85735952-85735971 | Msa0382950:intron | 20.0% |
| !!! | ATGTTTTTTCTTTTTGAAAC+TGG | + | chr3_1:85736066-85736085 | Msa0382950:intron | 20.0% |
| !! | TGTATTTGGTATTCAAATTA+CGG | + | chr3_1:85736153-85736172 | Msa0382950:intron | 20.0% |
| !!! | ATTTAAAAAATTATAGTGGG+TGG | - | chr3_1:85736198-85736217 | None:intergenic | 20.0% |
| !! | TAAATATTAAAAAAAGGACG+TGG | + | chr3_1:85736319-85736338 | Msa0382950:intron | 20.0% |
| !! | AATATATCAATGGTTATCAA+TGG | + | chr3_1:85736627-85736646 | Msa0382950:intron | 20.0% |
| !! | AATGAATGTCTGTTTATAAA+TGG | + | chr3_1:85736882-85736901 | Msa0382950:intron | 20.0% |
| !! | ATGAATGTCTGTTTATAAAT+GGG | + | chr3_1:85736883-85736902 | Msa0382950:intron | 20.0% |
| !! | AGATGTTAGAATATATCATA+TGG | + | chr3_1:85737315-85737334 | Msa0382950:intron | 20.0% |
| !! | TACAGTTAAACTAGTATAAA+TGG | - | chr3_1:85737364-85737383 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGGGATAATTA+TGG | - | chr3_1:85737690-85737709 | None:intergenic | 20.0% |
| !! | GAAAAAATTCAAAAAGTTCT+TGG | - | chr3_1:85737854-85737873 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTTTCAATCAAC+TGG | + | chr3_1:85737861-85737880 | Msa0382950:CDS | 20.0% |
| !!! | TAACTTTAGCTTTTCATTTA+CGG | - | chr3_1:85737923-85737942 | None:intergenic | 20.0% |
| !! | TGATTAAGAAAATAACTATG+AGG | - | chr3_1:85738259-85738278 | None:intergenic | 20.0% |
| !! | AATTATGAATGAAAATATCC+GGG | - | chr3_1:85738386-85738405 | None:intergenic | 20.0% |
| !! | AAAAATATATGTATGAGCAA+AGG | - | chr3_1:85738677-85738696 | None:intergenic | 20.0% |
| !! | TTGTTTCAAGATTAAAACTT+AGG | + | chr3_1:85738990-85739009 | Msa0382950:three_prime_UTR | 20.0% |
| ! | TGTGTGTTTGAAAAATTTGT+AGG | + | chr3_1:85731602-85731621 | Msa0382950:intron | 25.0% |
| !! | TTAACCACAATTTTGAACAT+TGG | - | chr3_1:85731793-85731812 | None:intergenic | 25.0% |
| !! | TTGTGGTTAATTTTGTTCAA+TGG | + | chr3_1:85731803-85731822 | Msa0382950:intron | 25.0% |
| !!! | GGGACATAATATTTTTTGTA+TGG | - | chr3_1:85732022-85732041 | None:intergenic | 25.0% |
| ! | TACCGTATGAAAAATAGAAA+TGG | + | chr3_1:85732128-85732147 | Msa0382950:intron | 25.0% |
| !! | AAATAAAAAACATGATGGTG+GGG | - | chr3_1:85732393-85732412 | None:intergenic | 25.0% |
| ! | GAAATAAAAAACATGATGGT+GGG | - | chr3_1:85732394-85732413 | None:intergenic | 25.0% |
| ! | CAAAATAAATGAATGAGTGA+AGG | - | chr3_1:85732480-85732499 | None:intergenic | 25.0% |
| ! | GACAAACTTTAGGTATAAAA+TGG | - | chr3_1:85733015-85733034 | None:intergenic | 25.0% |
| !! | TCTAAAATTGAAGGAATTTG+TGG | + | chr3_1:85733111-85733130 | Msa0382950:intron | 25.0% |
| ! | ATATATCAATATAACTGTCG+TGG | - | chr3_1:85733160-85733179 | None:intergenic | 25.0% |
| ! | CATTACCTAAAAAAAAAGGT+TGG | - | chr3_1:85733271-85733290 | None:intergenic | 25.0% |
| ! | GATGCATTACCTAAAAAAAA+AGG | - | chr3_1:85733275-85733294 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGATATGCCTATT+CGG | + | chr3_1:85733572-85733591 | Msa0382950:CDS | 25.0% |
| !! | TGATATTTGTTACAGCTATA+TGG | - | chr3_1:85733732-85733751 | None:intergenic | 25.0% |
| ! | ATATAGCTGTAACAAATATC+AGG | + | chr3_1:85733731-85733750 | Msa0382950:intron | 25.0% |
| ! | AAAATGATTGAGTATTTCCA+CGG | - | chr3_1:85733774-85733793 | None:intergenic | 25.0% |
| !! | TTTATCATTTTGAATTGCTC+TGG | + | chr3_1:85733798-85733817 | Msa0382950:intron | 25.0% |
| ! | GACAATAAATAACTAAGGTT+TGG | + | chr3_1:85733884-85733903 | Msa0382950:intron | 25.0% |
| ! | TCTTTCACTTTACATATGAT+AGG | + | chr3_1:85733996-85734015 | Msa0382950:intron | 25.0% |
| ! | CTTTCACTTTACATATGATA+GGG | + | chr3_1:85733997-85734016 | Msa0382950:intron | 25.0% |
| ! | CCAGAATTTATTCTAATGTA+AGG | - | chr3_1:85734060-85734079 | None:intergenic | 25.0% |
| ! | CCTTACATTAGAATAAATTC+TGG | + | chr3_1:85734057-85734076 | Msa0382950:intron | 25.0% |
| !!! | TAGAATAAATTCTGGAATAC+TGG | + | chr3_1:85734065-85734084 | Msa0382950:intron | 25.0% |
| !!! | AGAATAAATTCTGGAATACT+GGG | + | chr3_1:85734066-85734085 | Msa0382950:intron | 25.0% |
| ! | ATAGGATATATAAAGGGAAA+AGG | - | chr3_1:85734341-85734360 | None:intergenic | 25.0% |
| ! | GATAGTCATAGGATATATAA+AGG | - | chr3_1:85734348-85734367 | None:intergenic | 25.0% |
| ! | TTCAACAAAAACTATTAGTG+AGG | + | chr3_1:85734520-85734539 | Msa0382950:CDS | 25.0% |
| ! | TGAATATGTGATTATAAACG+GGG | + | chr3_1:85735178-85735197 | Msa0382950:intron | 25.0% |
| !! | TTTCTTTCTTTTAATGTAGC+AGG | - | chr3_1:85735317-85735336 | None:intergenic | 25.0% |
| !! | GTCTGAAAAATATTTTATGC+AGG | + | chr3_1:85735340-85735359 | Msa0382950:intron | 25.0% |
| !! | AATATTTTATGCAGGGATAA+TGG | + | chr3_1:85735348-85735367 | Msa0382950:intron | 25.0% |
| ! | AATATTAAAGAAAGTAGCTG+GGG | - | chr3_1:85735425-85735444 | None:intergenic | 25.0% |
| ! | TAATTGTGATTCTTTCAATG+GGG | - | chr3_1:85735558-85735577 | None:intergenic | 25.0% |
| !!! | AAATTGCGTTTTGATTTTAC+TGG | + | chr3_1:85735750-85735769 | Msa0382950:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | - | chr3_1:85735778-85735797 | None:intergenic | 25.0% |
| !!! | TCGTTATCTTCTGAAAATTT+TGG | + | chr3_1:85736039-85736058 | Msa0382950:intron | 25.0% |
| !!! | TTTTTGAAACTGGAAAAATC+TGG | + | chr3_1:85736076-85736095 | Msa0382950:intron | 25.0% |
| ! | ATTTATGTGACTTTGCTTAA+GGG | + | chr3_1:85736099-85736118 | Msa0382950:intron | 25.0% |
| ! | CTTGAATTTGATGTTGTATT+TGG | + | chr3_1:85736139-85736158 | Msa0382950:intron | 25.0% |
| !! | TTTTCCAGATCTGAATTTTT+AGG | + | chr3_1:85736389-85736408 | Msa0382950:intron | 25.0% |
| ! | TTGATGAAGACGAATAATAA+TGG | + | chr3_1:85736434-85736453 | Msa0382950:intron | 25.0% |
| ! | ATTCATATATCATCCAATCT+GGG | - | chr3_1:85736865-85736884 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTCTTAGAATTT+GGG | - | chr3_1:85736957-85736976 | None:intergenic | 25.0% |
| ! | ATATATTATATAACCGATGC+AGG | + | chr3_1:85737188-85737207 | Msa0382950:intron | 25.0% |
| !!! | CTATTTTGTCTCTAAAAATG+AGG | - | chr3_1:85737233-85737252 | None:intergenic | 25.0% |
| ! | AAACTAGTATAAATGGTTCT+AGG | - | chr3_1:85737357-85737376 | None:intergenic | 25.0% |
| !! | TTTTCCCTTGATTACAATTA+GGG | - | chr3_1:85737500-85737519 | None:intergenic | 25.0% |
| !! | TTTTTCCCTTGATTACAATT+AGG | - | chr3_1:85737501-85737520 | None:intergenic | 25.0% |
| !! | ATTGCAATAAGACGTTATTT+TGG | - | chr3_1:85737629-85737648 | None:intergenic | 25.0% |
| !! | CAATCGCAAAAAGTATAAAA+GGG | - | chr3_1:85737700-85737719 | None:intergenic | 25.0% |
| !! | ACAATCGCAAAAAGTATAAA+AGG | - | chr3_1:85737701-85737720 | None:intergenic | 25.0% |
| !!! | AACTTTAGCTTTTCATTTAC+GGG | - | chr3_1:85737922-85737941 | None:intergenic | 25.0% |
| ! | AAATCTTATAGAAGCAACAT+GGG | - | chr3_1:85738004-85738023 | None:intergenic | 25.0% |
| !! | TCTACTAGTAGATATCTTTT+AGG | + | chr3_1:85738047-85738066 | Msa0382950:intron | 25.0% |
| !! | CTACTAGTAGATATCTTTTA+GGG | + | chr3_1:85738048-85738067 | Msa0382950:intron | 25.0% |
| !! | GAAAATAACTATGAGGATTT+TGG | - | chr3_1:85738252-85738271 | None:intergenic | 25.0% |
| !! | TATTTTGTTGCATGATACTT+TGG | + | chr3_1:85738730-85738749 | Msa0382950:CDS | 25.0% |
| ! | GGTTTCTGATAAAATTATAC+AGG | + | chr3_1:85738944-85738963 | Msa0382950:three_prime_UTR | 25.0% |
| ! | CAAGATTAAAACTTAGGATT+TGG | + | chr3_1:85738996-85739015 | Msa0382950:three_prime_UTR | 25.0% |
| ! | ATTAAAACTTAGGATTTGGA+TGG | + | chr3_1:85739000-85739019 | Msa0382950:three_prime_UTR | 25.0% |
| !!! | GTGAAATTTTAATGCTCAAA+TGG | + | chr3_1:85739022-85739041 | Msa0382950:three_prime_UTR | 25.0% |
| TCATTCAACTTGAACACAAA+AGG | + | chr3_1:85731539-85731558 | Msa0382950:intron | 30.0% | |
| CATGATATATCAAAGGTAGA+AGG | - | chr3_1:85731892-85731911 | None:intergenic | 30.0% | |
| !! | TGACGAAATTTGCTAAATGA+GGG | - | chr3_1:85731931-85731950 | None:intergenic | 30.0% |
| !! | ATGACGAAATTTGCTAAATG+AGG | - | chr3_1:85731932-85731951 | None:intergenic | 30.0% |
| AAGAGAAGAGAACATAAATG+AGG | - | chr3_1:85732319-85732338 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAAAAG+AGG | - | chr3_1:85732357-85732376 | None:intergenic | 30.0% | |
| !! | AATAAAAAACATGATGGTGG+GGG | - | chr3_1:85732392-85732411 | None:intergenic | 30.0% |
| GGAAATAAAAAACATGATGG+TGG | - | chr3_1:85732395-85732414 | None:intergenic | 30.0% | |
| AGCGGAAATAAAAAACATGA+TGG | - | chr3_1:85732398-85732417 | None:intergenic | 30.0% | |
| TTGTAAGCAACAGAAGTTAA+CGG | - | chr3_1:85732437-85732456 | None:intergenic | 30.0% | |
| ! | ATAAGAAAGAAGTAGCCTTT+TGG | - | chr3_1:85732565-85732584 | None:intergenic | 30.0% |
| ACTTCTTTCTTATCAATCCT+TGG | + | chr3_1:85732572-85732591 | Msa0382950:CDS | 30.0% | |
| ! | TTTTTGGACAATAAGTCAGA+TGG | - | chr3_1:85732811-85732830 | None:intergenic | 30.0% |
| ATTCATGTACTACAGAATGA+TGG | - | chr3_1:85732879-85732898 | None:intergenic | 30.0% | |
| AATGCATTGTAGATGATCAT+TGG | - | chr3_1:85732944-85732963 | None:intergenic | 30.0% | |
| ! | GTATTGATCGCATTATGATT+TGG | + | chr3_1:85733646-85733665 | Msa0382950:intron | 30.0% |
| AAGATTTATAGCATTTCCGT+TGG | - | chr3_1:85733696-85733715 | None:intergenic | 30.0% | |
| ACGGAAATGCTATAAATCTT+AGG | + | chr3_1:85733696-85733715 | Msa0382950:intron | 30.0% | |
| ! | GCAGACAAACATTTAGATTT+TGG | + | chr3_1:85733862-85733881 | Msa0382950:intron | 30.0% |
| AAGACAATGAGAAAATCAGA+GGG | - | chr3_1:85734181-85734200 | None:intergenic | 30.0% | |
| AAAGACAATGAGAAAATCAG+AGG | - | chr3_1:85734182-85734201 | None:intergenic | 30.0% | |
| TATATAAAGGGAAAAGGAAG+TGG | - | chr3_1:85734335-85734354 | None:intergenic | 30.0% | |
| ! | ATGCTATGATTGATAGTCAT+AGG | - | chr3_1:85734359-85734378 | None:intergenic | 30.0% |
| TCATAGCATCTAGTAATAAG+AGG | + | chr3_1:85734370-85734389 | Msa0382950:intron | 30.0% | |
| !! | GTGATCAACATATAATGGAT+TGG | + | chr3_1:85734394-85734413 | Msa0382950:intron | 30.0% |
| ! | TTAGCTATCAAATTTTCCTG+CGG | + | chr3_1:85734452-85734471 | Msa0382950:intron | 30.0% |
| ATTAATTACCACCACTGAAT+GGG | - | chr3_1:85734669-85734688 | None:intergenic | 30.0% | |
| TATTAATTACCACCACTGAA+TGG | - | chr3_1:85734670-85734689 | None:intergenic | 30.0% | |
| TCAAACTCAATAAGAAGGTT+CGG | + | chr3_1:85734759-85734778 | Msa0382950:CDS | 30.0% | |
| TAAGAAAGAAGGCAATGATA+AGG | - | chr3_1:85734857-85734876 | None:intergenic | 30.0% | |
| TATGTAGTGTGAATTTACTC+TGG | + | chr3_1:85735080-85735099 | Msa0382950:intron | 30.0% | |
| !! | ATCTAGCTTTCAGCTAATAT+GGG | - | chr3_1:85735399-85735418 | None:intergenic | 30.0% |
| !! | TATCTAGCTTTCAGCTAATA+TGG | - | chr3_1:85735400-85735419 | None:intergenic | 30.0% |
| TTTATCTGTGAGAAAACCTT+AGG | + | chr3_1:85735445-85735464 | Msa0382950:intron | 30.0% | |
| AATTGTGATTCTTTCAATGG+GGG | - | chr3_1:85735557-85735576 | None:intergenic | 30.0% | |
| GAATAATCCAAATTGAAGAG+TGG | - | chr3_1:85735854-85735873 | None:intergenic | 30.0% | |
| AAGAAGAAAGATGAGATTCA+TGG | - | chr3_1:85735893-85735912 | None:intergenic | 30.0% | |
| GATTTATGTGACTTTGCTTA+AGG | + | chr3_1:85736098-85736117 | Msa0382950:intron | 30.0% | |
| TTTATGTGACTTTGCTTAAG+GGG | + | chr3_1:85736100-85736119 | Msa0382950:intron | 30.0% | |
| !! | TAAAAAATTATAGTGGGTGG+AGG | - | chr3_1:85736195-85736214 | None:intergenic | 30.0% |
| TCTTCCTAAAAATTCAGATC+TGG | - | chr3_1:85736396-85736415 | None:intergenic | 30.0% | |
| TTATAGACAATTTAAAGGCG+GGG | + | chr3_1:85736521-85736540 | Msa0382950:intron | 30.0% | |
| TCAATGGATGAGAAAGTAAT+TGG | + | chr3_1:85736643-85736662 | Msa0382950:intron | 30.0% | |
| ATGAGAAAGTAATTGGTGTA+TGG | + | chr3_1:85736650-85736669 | Msa0382950:intron | 30.0% | |
| ! | ACAAATTTGTGTTTTGTGCA+TGG | + | chr3_1:85736676-85736695 | Msa0382950:intron | 30.0% |
| CATTCATATATCATCCAATC+TGG | - | chr3_1:85736866-85736885 | None:intergenic | 30.0% | |
| ! | CCTTACAAAACTAACTTGTA+AGG | - | chr3_1:85736919-85736938 | None:intergenic | 30.0% |
| !!! | CCTTACAAGTTAGTTTTGTA+AGG | + | chr3_1:85736916-85736935 | Msa0382950:intron | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | + | chr3_1:85736926-85736945 | Msa0382950:intron | 30.0% |
| ! | TGATTCTTAGAATTTGGGTT+GGG | - | chr3_1:85736952-85736971 | None:intergenic | 30.0% |
| TTGATTCTTAGAATTTGGGT+TGG | - | chr3_1:85736953-85736972 | None:intergenic | 30.0% | |
| !! | GCAAGTTGATTCTTAGAATT+TGG | - | chr3_1:85736958-85736977 | None:intergenic | 30.0% |
| TCCAAAGTATGGTCAATAAA+GGG | + | chr3_1:85737425-85737444 | Msa0382950:intron | 30.0% | |
| TACAATTAGGGTTACATACA+TGG | - | chr3_1:85737488-85737507 | None:intergenic | 30.0% | |
| TGTAACCCTAATTGTAATCA+AGG | + | chr3_1:85737492-85737511 | Msa0382950:intron | 30.0% | |
| GTAACCCTAATTGTAATCAA+GGG | + | chr3_1:85737493-85737512 | Msa0382950:intron | 30.0% | |
| !!! | GAATTTTTTCAATCAACTGG+AGG | + | chr3_1:85737864-85737883 | Msa0382950:CDS | 30.0% |
| !!! | ACTTTAGCTTTTCATTTACG+GGG | - | chr3_1:85737921-85737940 | None:intergenic | 30.0% |
| AAACTGATACTTACAATGGA+TGG | - | chr3_1:85737979-85737998 | None:intergenic | 30.0% | |
| GGTAAAACTGATACTTACAA+TGG | - | chr3_1:85737983-85738002 | None:intergenic | 30.0% | |
| GAAATCTTATAGAAGCAACA+TGG | - | chr3_1:85738005-85738024 | None:intergenic | 30.0% | |
| TGCTTCTATAAGATTTCTCA+TGG | + | chr3_1:85738008-85738027 | Msa0382950:intron | 30.0% | |
| ! | ATAACTATGAGGATTTTGGA+GGG | - | chr3_1:85738248-85738267 | None:intergenic | 30.0% |
| ! | AATAACTATGAGGATTTTGG+AGG | - | chr3_1:85738249-85738268 | None:intergenic | 30.0% |
| TCACACTTACCAACTTATTT+AGG | + | chr3_1:85738315-85738334 | Msa0382950:intron | 30.0% | |
| !! | TCTCCATCATTTTTGTAAGA+TGG | + | chr3_1:85738603-85738622 | Msa0382950:intron | 30.0% |
| GATCCATCTTACAAAAATGA+TGG | - | chr3_1:85738609-85738628 | None:intergenic | 30.0% | |
| TTATTTGGGTGTGGATTTAT+TGG | - | chr3_1:85738810-85738829 | None:intergenic | 30.0% | |
| TAAATCCACACCCAAATAAA+TGG | + | chr3_1:85738811-85738830 | Msa0382950:exon | 30.0% | |
| ACTACCTCAACCATTTATTT+GGG | - | chr3_1:85738824-85738843 | None:intergenic | 30.0% | |
| TACTACCTCAACCATTTATT+TGG | - | chr3_1:85738825-85738844 | None:intergenic | 30.0% | |
| GTACTAAACTTCATTTACTC+AGG | + | chr3_1:85738854-85738873 | Msa0382950:three_prime_UTR | 30.0% | |
| AACTTCATTTACTCAGGATT+AGG | + | chr3_1:85738860-85738879 | Msa0382950:three_prime_UTR | 30.0% | |
| CTCAAGCAAAATATTCTCAT+TGG | - | chr3_1:85738925-85738944 | None:intergenic | 30.0% | |
| ! | CAATGAGAATATTTTGCTTG+AGG | + | chr3_1:85738923-85738942 | Msa0382950:three_prime_UTR | 30.0% |
| ! | CTCAAATGGTTAAGTTGTTA+TGG | + | chr3_1:85739036-85739055 | Msa0382950:three_prime_UTR | 30.0% |
| CATTGGTCGTCATGATATTT+AGG | - | chr3_1:85731776-85731795 | None:intergenic | 35.0% | |
| ACGACCAATGTTCAAAATTG+TGG | + | chr3_1:85731786-85731805 | Msa0382950:intron | 35.0% | |
| !! | AAAAAGAGGTACCTAACTAG+CGG | - | chr3_1:85732343-85732362 | None:intergenic | 35.0% |
| !! | GTAGGTTGATTCTTCAGTTA+TGG | + | chr3_1:85732527-85732546 | Msa0382950:intron | 35.0% |
| TTTCTTATCAATCCTTGGCA+CGG | + | chr3_1:85732577-85732596 | Msa0382950:CDS | 35.0% | |
| GAATGCAATGTACCAAGATA+CGG | - | chr3_1:85732662-85732681 | None:intergenic | 35.0% | |
| !! | AGTAGAAGTAGAAAAGCGTT+GGG | - | chr3_1:85732773-85732792 | None:intergenic | 35.0% |
| TCTGTAGTACATGAATATGC+TGG | + | chr3_1:85732883-85732902 | Msa0382950:intron | 35.0% | |
| TTGCATGAGATAAAGCAGAA+AGG | - | chr3_1:85732913-85732932 | None:intergenic | 35.0% | |
| CTTGAGTCTTGACAAACTTT+AGG | - | chr3_1:85733025-85733044 | None:intergenic | 35.0% | |
| !! | TGCTTCTGCTCTAAAATTGA+AGG | + | chr3_1:85733102-85733121 | Msa0382950:intron | 35.0% |
| !!! | GTGCTCCAACCTTTTTTTTT+AGG | + | chr3_1:85733263-85733282 | Msa0382950:intron | 35.0% |
| CTTTGTTCTCGTTCTTGAAA+AGG | - | chr3_1:85733301-85733320 | None:intergenic | 35.0% | |
| !! | AACTCATCTAGTCTTGATCA+TGG | + | chr3_1:85733410-85733429 | Msa0382950:intron | 35.0% |
| !! | ACTCATCTAGTCTTGATCAT+GGG | + | chr3_1:85733411-85733430 | Msa0382950:intron | 35.0% |
| AACTTTCACAACGAAGACAA+GGG | + | chr3_1:85733529-85733548 | Msa0382950:CDS | 35.0% | |
| ! | TTTTGATATGCCTATTCGGA+AGG | + | chr3_1:85733576-85733595 | Msa0382950:CDS | 35.0% |
| TGAACTATATCCTTCCGAAT+AGG | - | chr3_1:85733589-85733608 | None:intergenic | 35.0% | |
| ATAATGCGATCAATACCTGT+TGG | - | chr3_1:85733642-85733661 | None:intergenic | 35.0% | |
| ! | ATGATTTGGAACCATTGAAC+TGG | + | chr3_1:85733660-85733679 | Msa0382950:intron | 35.0% |
| ! | TGATTTGGAACCATTGAACT+GGG | + | chr3_1:85733661-85733680 | Msa0382950:intron | 35.0% |
| TGTATTCAATTGTTGAACCG+TGG | + | chr3_1:85733754-85733773 | Msa0382950:intron | 35.0% | |
| !!! | TCTCATTGATTTTTGCCAAC+AGG | + | chr3_1:85734490-85734509 | Msa0382950:intron | 35.0% |
| !!! | CTCATTGATTTTTGCCAACA+GGG | + | chr3_1:85734491-85734510 | Msa0382950:intron | 35.0% |
| AAAACTATTAGTGAGGTCAG+TGG | + | chr3_1:85734527-85734546 | Msa0382950:CDS | 35.0% | |
| AAACTATTAGTGAGGTCAGT+GGG | + | chr3_1:85734528-85734547 | Msa0382950:CDS | 35.0% | |
| TAAAGAATGTTCTGTACCTG+AGG | - | chr3_1:85734617-85734636 | None:intergenic | 35.0% | |
| AATGGGAGGAGGAATAAAAT+GGG | - | chr3_1:85734652-85734671 | None:intergenic | 35.0% | |
| TTAATGAATGGCAACAGTTC+AGG | + | chr3_1:85734693-85734712 | Msa0382950:intron | 35.0% | |
| TAATGAATGGCAACAGTTCA+GGG | + | chr3_1:85734694-85734713 | Msa0382950:intron | 35.0% | |
| CGCTTTCAAACTCAATAAGA+AGG | + | chr3_1:85734754-85734773 | Msa0382950:CDS | 35.0% | |
| AATGATAAGGAGAGTGATAG+AGG | - | chr3_1:85734844-85734863 | None:intergenic | 35.0% | |
| CAATGTTAAGAGTCTCACAT+TGG | + | chr3_1:85735142-85735161 | Msa0382950:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | chr3_1:85735648-85735667 | None:intergenic | 35.0% | |
| TAATCCAAATTGAAGAGTGG+AGG | - | chr3_1:85735851-85735870 | None:intergenic | 35.0% | |
| AAGAAAGATGAGATTCATGG+TGG | - | chr3_1:85735890-85735909 | None:intergenic | 35.0% | |
| TGCTTAAGGGGTAATATGAA+TGG | + | chr3_1:85736112-85736131 | Msa0382950:intron | 35.0% | |
| GCAGATATGAACATTTCTTG+TGG | + | chr3_1:85736360-85736379 | Msa0382950:intron | 35.0% | |
| TAACCCAACTATACAAAACC+GGG | - | chr3_1:85736712-85736731 | None:intergenic | 35.0% | |
| CTAACCCAACTATACAAAAC+CGG | - | chr3_1:85736713-85736732 | None:intergenic | 35.0% | |
| ! | CAAAACTAACTTGTAAGGTG+AGG | - | chr3_1:85736914-85736933 | None:intergenic | 35.0% |
| CTCCAAAGTATGGTCAATAA+AGG | + | chr3_1:85737424-85737443 | Msa0382950:intron | 35.0% | |
| ACCCTTTATTGACCATACTT+TGG | - | chr3_1:85737429-85737448 | None:intergenic | 35.0% | |
| TCATTGAACTCAAAGAAAGC+CGG | - | chr3_1:85737578-85737597 | None:intergenic | 35.0% | |
| TATACAGCTTCTAGTGTTTG+AGG | + | chr3_1:85737804-85737823 | Msa0382950:intron | 35.0% | |
| !!! | AAGTTCTTGGTTTTATGCGT+GGG | - | chr3_1:85737841-85737860 | None:intergenic | 35.0% |
| !!! | AAAGTTCTTGGTTTTATGCG+TGG | - | chr3_1:85737842-85737861 | None:intergenic | 35.0% |
| ATCTACGATCAGAAGTTTCT+TGG | - | chr3_1:85737893-85737912 | None:intergenic | 35.0% | |
| AAACTTCTGATCGTAGATGA+CGG | + | chr3_1:85737895-85737914 | Msa0382950:CDS | 35.0% | |
| !! | TAACTATGAGGATTTTGGAG+GGG | - | chr3_1:85738247-85738266 | None:intergenic | 35.0% |
| GGAAACTCTCCTAAATAAGT+TGG | - | chr3_1:85738327-85738346 | None:intergenic | 35.0% | |
| TAGATTCTTCAGTCTGAGTT+TGG | + | chr3_1:85738521-85738540 | Msa0382950:intron | 35.0% | |
| AATTCTGTTCACAGCATCTT+TGG | - | chr3_1:85738762-85738781 | None:intergenic | 35.0% | |
| TGTTACAGAAATGAGGACAT+GGG | - | chr3_1:85738895-85738914 | None:intergenic | 35.0% | |
| ATCACTGTGTTACAGAAATG+AGG | - | chr3_1:85738902-85738921 | None:intergenic | 35.0% | |
| ! | GAGAACCAACAGGTTTGTTT+CGG | - | chr3_1:85732266-85732285 | None:intergenic | 40.0% |
| !! | GAAACAAACCTGTTGGTTCT+CGG | + | chr3_1:85732265-85732284 | Msa0382950:CDS | 40.0% |
| GGCAATTTGAGCTTAACTAG+CGG | - | chr3_1:85732416-85732435 | None:intergenic | 40.0% | |
| TGGCTTCTTTCATCTCCAAA+AGG | + | chr3_1:85732547-85732566 | Msa0382950:CDS | 40.0% | |
| ! | CAGTAGAAGTAGAAAAGCGT+TGG | - | chr3_1:85732774-85732793 | None:intergenic | 40.0% |
| TGAGCGTGATATAGGTATGA+AGG | + | chr3_1:85732846-85732865 | Msa0382950:intron | 40.0% | |
| AATTGAAGGAATTTGTGGCC+AGG | + | chr3_1:85733116-85733135 | Msa0382950:intron | 40.0% | |
| ATTGAAGGAATTTGTGGCCA+GGG | + | chr3_1:85733117-85733136 | Msa0382950:intron | 40.0% | |
| AAGACCCAAAAGTTAAACCC+TGG | - | chr3_1:85733137-85733156 | None:intergenic | 40.0% | |
| AGATGAGTTGCCATGATAGA+TGG | - | chr3_1:85733399-85733418 | None:intergenic | 40.0% | |
| AATGTGGTTCATTATGCTGC+AGG | + | chr3_1:85733475-85733494 | Msa0382950:intron | 40.0% | |
| ATGTGGTTCATTATGCTGCA+GGG | + | chr3_1:85733476-85733495 | Msa0382950:intron | 40.0% | |
| !! | TCGTTGTGAAAGTTGGTAAC+TGG | - | chr3_1:85733523-85733542 | None:intergenic | 40.0% |
| CTTGTCTTCGTTGTGAAAGT+TGG | - | chr3_1:85733530-85733549 | None:intergenic | 40.0% | |
| CAACTTTCACAACGAAGACA+AGG | + | chr3_1:85733528-85733547 | Msa0382950:CDS | 40.0% | |
| !!! | AAGGGCTTTATGGTTTTAGC+TGG | + | chr3_1:85733547-85733566 | Msa0382950:CDS | 40.0% |
| !!! | TAGTTCACCGTGTTGTTTTG+TGG | + | chr3_1:85733602-85733621 | Msa0382950:CDS | 40.0% |
| GATTACATGTCCCAGTTCAA+TGG | - | chr3_1:85733674-85733693 | None:intergenic | 40.0% | |
| AACTGGGACATGTAATCCAA+CGG | + | chr3_1:85733677-85733696 | Msa0382950:intron | 40.0% | |
| ! | AGAATTGTGTAGAGAGGCAT+CGG | - | chr3_1:85734137-85734156 | None:intergenic | 40.0% |
| ACAATGAGAAAATCAGAGGG+CGG | - | chr3_1:85734178-85734197 | None:intergenic | 40.0% | |
| TCCTTGATATGTGACAGCAA+GGG | - | chr3_1:85734235-85734254 | None:intergenic | 40.0% | |
| ATCCTTGATATGTGACAGCA+AGG | - | chr3_1:85734236-85734255 | None:intergenic | 40.0% | |
| GAGGCGTGATCAACATATAA+TGG | + | chr3_1:85734389-85734408 | Msa0382950:intron | 40.0% | |
| AAAACAAGTAACATAGCCGC+AGG | - | chr3_1:85734471-85734490 | None:intergenic | 40.0% | |
| TTGTTGAATGAGTTCCCTGT+TGG | - | chr3_1:85734508-85734527 | None:intergenic | 40.0% | |
| AGAAAGCCTTGGAACCAAAA+GGG | + | chr3_1:85734557-85734576 | Msa0382950:CDS | 40.0% | |
| GAATGGGAGGAGGAATAAAA+TGG | - | chr3_1:85734653-85734672 | None:intergenic | 40.0% | |
| AATGAATGGCAACAGTTCAG+GGG | + | chr3_1:85734695-85734714 | Msa0382950:intron | 40.0% | |
| ! | TGAGTTTGAAAGCGTGACTT+CGG | - | chr3_1:85734748-85734767 | None:intergenic | 40.0% |
| TAATAGTTTACCAGCCAAGC+TGG | + | chr3_1:85735012-85735031 | Msa0382950:intron | 40.0% | |
| TTGTAAATGCCACCCAAAAC+CGG | - | chr3_1:85735223-85735242 | None:intergenic | 40.0% | |
| TAGCTTTCAGCTAATATGGG+AGG | - | chr3_1:85735396-85735415 | None:intergenic | 40.0% | |
| ! | ACCGAGCCTCTAAAAACTAT+GGG | + | chr3_1:85735506-85735525 | Msa0382950:intron | 40.0% |
| !! | TTGAGGCCCATAGTTTTTAG+AGG | - | chr3_1:85735515-85735534 | None:intergenic | 40.0% |
| !! | ATTTACCTAACGGTGTCGTT+TGG | - | chr3_1:85735638-85735657 | None:intergenic | 40.0% |
| TTCCTATGAAATAGGAGGCT+CGG | - | chr3_1:85735796-85735815 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | + | chr3_1:85735796-85735815 | Msa0382950:intron | 40.0% | |
| GTTTCAATAGCCTAAGGTCA+GGG | - | chr3_1:85735822-85735841 | None:intergenic | 40.0% | |
| ! | TCATGGTGGTAATGCATAAC+TGG | - | chr3_1:85735876-85735895 | None:intergenic | 40.0% |
| !!! | GGGGTCACTATTTTTGTTGT+TGG | + | chr3_1:85736540-85736559 | Msa0382950:intron | 40.0% |
| CGACAGTTCAGATCAAAAGT+TGG | - | chr3_1:85736595-85736614 | None:intergenic | 40.0% | |
| AACCCAACTATACAAAACCG+GGG | - | chr3_1:85736711-85736730 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTATAGTTGGGTT+AGG | + | chr3_1:85736711-85736730 | Msa0382950:intron | 40.0% |
| ! | GATTGTGGAAACTTGATAGC+AGG | - | chr3_1:85736790-85736809 | None:intergenic | 40.0% |
| GCTATCAAGTTTCCACAATC+AGG | + | chr3_1:85736790-85736809 | Msa0382950:intron | 40.0% | |
| ACGCTTCAGATGTGAATCTT+GGG | + | chr3_1:85736815-85736834 | Msa0382950:intron | 40.0% | |
| TTTAGAAGAACAGCCTGCAT+CGG | - | chr3_1:85737204-85737223 | None:intergenic | 40.0% | |
| ! | GTCTTCACAGAATTGCTGTT+CGG | + | chr3_1:85737261-85737280 | Msa0382950:intron | 40.0% |
| TGTTTGTGTACACTGATCTC+TGG | + | chr3_1:85737771-85737790 | Msa0382950:intron | 40.0% | |
| GCTTCTAGTGTTTGAGGATT+TGG | + | chr3_1:85737810-85737829 | Msa0382950:intron | 40.0% | |
| TCTAGTGTTTGAGGATTTGG+AGG | + | chr3_1:85737813-85737832 | Msa0382950:intron | 40.0% | |
| !!! | TCTTTTAGGGTATGTTGCGA+TGG | + | chr3_1:85738061-85738080 | Msa0382950:intron | 40.0% |
| AAGTGTGAGAAGAACAATGG+AGG | - | chr3_1:85738303-85738322 | None:intergenic | 40.0% | |
| GGTAAGTGTGAGAAGAACAA+TGG | - | chr3_1:85738306-85738325 | None:intergenic | 40.0% | |
| TTTCCTCATCTTCTCCTCAA+AGG | + | chr3_1:85738342-85738361 | Msa0382950:intron | 40.0% | |
| TTCCTCATCTTCTCCTCAAA+GGG | + | chr3_1:85738343-85738362 | Msa0382950:intron | 40.0% | |
| AGTGAAGTTGAACAGTGAAG+CGG | - | chr3_1:85738467-85738486 | None:intergenic | 40.0% | |
| GGTGTGGATTTATTGGAGAT+TGG | - | chr3_1:85738803-85738822 | None:intergenic | 40.0% | |
| CTCAACCATTTATTTGGGTG+TGG | - | chr3_1:85738819-85738838 | None:intergenic | 40.0% | |
| CACACCCAAATAAATGGTTG+AGG | + | chr3_1:85738817-85738836 | Msa0382950:exon | 40.0% | |
| GTTACAGAAATGAGGACATG+GGG | - | chr3_1:85738894-85738913 | None:intergenic | 40.0% | |
| GTGTTACAGAAATGAGGACA+TGG | - | chr3_1:85738896-85738915 | None:intergenic | 40.0% | |
| !! | GTTTCGGAGAGATGGGTTTT+GGG | - | chr3_1:85732250-85732269 | None:intergenic | 45.0% |
| !! | TGTTTCGGAGAGATGGGTTT+TGG | - | chr3_1:85732251-85732270 | None:intergenic | 45.0% |
| ! | CAGGTTTGTTTCGGAGAGAT+GGG | - | chr3_1:85732257-85732276 | None:intergenic | 45.0% |
| ! | ACAGGTTTGTTTCGGAGAGA+TGG | - | chr3_1:85732258-85732277 | None:intergenic | 45.0% |
| TCTCTCCGAAACAAACCTGT+TGG | + | chr3_1:85732258-85732277 | Msa0382950:CDS | 45.0% | |
| CATTTCTGCTCACCGTATCT+TGG | + | chr3_1:85732647-85732666 | Msa0382950:CDS | 45.0% | |
| !! | AAAGCGTTGGGTGATTGATC+CGG | - | chr3_1:85732761-85732780 | None:intergenic | 45.0% |
| ! | AGATGTTGCGAGAGGCTTTT+TGG | - | chr3_1:85732827-85732846 | None:intergenic | 45.0% |
| GCAACATCTGAGCGTGATAT+AGG | + | chr3_1:85732838-85732857 | Msa0382950:CDS | 45.0% | |
| !! | TGTGGCCAGGGTTTAACTTT+TGG | + | chr3_1:85733129-85733148 | Msa0382950:intron | 45.0% |
| !! | GTGGCCAGGGTTTAACTTTT+GGG | + | chr3_1:85733130-85733149 | Msa0382950:intron | 45.0% |
| ! | TTGCCATGATAGATGGTGGT+AGG | - | chr3_1:85733392-85733411 | None:intergenic | 45.0% |
| TGAGTTGCCATGATAGATGG+TGG | - | chr3_1:85733396-85733415 | None:intergenic | 45.0% | |
| CAACGAAGACAAGGGCTTTA+TGG | + | chr3_1:85733537-85733556 | Msa0382950:CDS | 45.0% | |
| AATTGTCTGTGAGGATGGAG+TGG | + | chr3_1:85733822-85733841 | Msa0382950:intron | 45.0% | |
| !! | GAATTGTGTAGAGAGGCATC+GGG | - | chr3_1:85734136-85734155 | None:intergenic | 45.0% |
| GCAGGTAGAATTGTGTAGAG+AGG | - | chr3_1:85734143-85734162 | None:intergenic | 45.0% | |
| ! | TCCCTTGCTGTCACATATCA+AGG | + | chr3_1:85734231-85734250 | Msa0382950:intron | 45.0% |
| TCAAGTGAGCAAGAGAAGTG+AGG | - | chr3_1:85734304-85734323 | None:intergenic | 45.0% | |
| GAGAAAGCCTTGGAACCAAA+AGG | + | chr3_1:85734556-85734575 | Msa0382950:CDS | 45.0% | |
| TTATTCCTCCTCCCATTCAG+TGG | + | chr3_1:85734655-85734674 | Msa0382950:intron | 45.0% | |
| AATTACCACCACTGAATGGG+AGG | - | chr3_1:85734666-85734685 | None:intergenic | 45.0% | |
| ! | AGTTTGAAAGCGTGACTTCG+GGG | - | chr3_1:85734746-85734765 | None:intergenic | 45.0% |
| ! | GAGTTTGAAAGCGTGACTTC+GGG | - | chr3_1:85734747-85734766 | None:intergenic | 45.0% |
| AATAAGAAGGTTCGGCGACT+GGG | + | chr3_1:85734767-85734786 | Msa0382950:CDS | 45.0% | |
| TATTGTGTCTCTTGCCAGCT+TGG | - | chr3_1:85735029-85735048 | None:intergenic | 45.0% | |
| ATAGTCCTCACCTTACAAGC+CGG | + | chr3_1:85735201-85735220 | Msa0382950:intron | 45.0% | |
| !! | TCACCTTACAAGCCGGTTTT+GGG | + | chr3_1:85735208-85735227 | Msa0382950:intron | 45.0% |
| CTGTGAGAAAACCTTAGGCA+AGG | + | chr3_1:85735450-85735469 | Msa0382950:intron | 45.0% | |
| ! | CACCGAGCCTCTAAAAACTA+TGG | + | chr3_1:85735505-85735524 | Msa0382950:intron | 45.0% |
| !! | GCCCATAGTTTTTAGAGGCT+CGG | - | chr3_1:85735510-85735529 | None:intergenic | 45.0% |
| GTGATTCTTTCAATGGGGGT+GGG | - | chr3_1:85735553-85735572 | None:intergenic | 45.0% | |
| TGTGATTCTTTCAATGGGGG+TGG | - | chr3_1:85735554-85735573 | None:intergenic | 45.0% | |
| GTAGGAAAGGGGAAAACGAA+TGG | - | chr3_1:85735598-85735617 | None:intergenic | 45.0% | |
| ACATTCCAAACGACACCGTT+AGG | + | chr3_1:85735630-85735649 | Msa0382950:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | + | chr3_1:85735791-85735810 | Msa0382950:intron | 45.0% | |
| GGTTTCAATAGCCTAAGGTC+AGG | - | chr3_1:85735823-85735842 | None:intergenic | 45.0% | |
| CGTGTGGTTTCAATAGCCTA+AGG | - | chr3_1:85735828-85735847 | None:intergenic | 45.0% | |
| AAAAGGACGTGGTACTGTTC+TGG | + | chr3_1:85736330-85736349 | Msa0382950:intron | 45.0% | |
| !! | CACCCCGGTTTTGTATAGTT+GGG | + | chr3_1:85736706-85736725 | Msa0382950:intron | 45.0% |
| TAGCCTATCCTAGAACCGTT+AGG | + | chr3_1:85736761-85736780 | Msa0382950:intron | 45.0% | |
| ! | TGTGGAAACTTGATAGCAGG+TGG | - | chr3_1:85736787-85736806 | None:intergenic | 45.0% |
| CACGCTTCAGATGTGAATCT+TGG | + | chr3_1:85736814-85736833 | Msa0382950:intron | 45.0% | |
| CTCTTAACACACACACACTC+AGG | - | chr3_1:85736841-85736860 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCAGAT+TGG | + | chr3_1:85736849-85736868 | Msa0382950:intron | 45.0% | |
| CGAGTGAGTCTCCCAAAATA+TGG | + | chr3_1:85737022-85737041 | Msa0382950:intron | 45.0% | |
| GATGCAGGCTGTTCTTCTAA+AGG | + | chr3_1:85737203-85737222 | Msa0382950:intron | 45.0% | |
| ! | TCACAGAATTGCTGTTCGGT+AGG | + | chr3_1:85737265-85737284 | Msa0382950:intron | 45.0% |
| ! | CACAGAATTGCTGTTCGGTA+GGG | + | chr3_1:85737266-85737285 | Msa0382950:intron | 45.0% |
| TCGGTAGGGAGAATTGAAGT+AGG | + | chr3_1:85737280-85737299 | Msa0382950:intron | 45.0% | |
| TCTGGATGTGCATTTAGTGG+GGG | - | chr3_1:85737403-85737422 | None:intergenic | 45.0% | |
| CTCTGGATGTGCATTTAGTG+GGG | - | chr3_1:85737404-85737423 | None:intergenic | 45.0% | |
| ! | GCTCTGGATGTGCATTTAGT+GGG | - | chr3_1:85737405-85737424 | None:intergenic | 45.0% |
| !! | AGCTCTGGATGTGCATTTAG+TGG | - | chr3_1:85737406-85737425 | None:intergenic | 45.0% |
| ACATCCAGAGCTCCAAAGTA+TGG | + | chr3_1:85737414-85737433 | Msa0382950:intron | 45.0% | |
| !! | TTGACCATACTTTGGAGCTC+TGG | - | chr3_1:85737421-85737440 | None:intergenic | 45.0% |
| AACTCAAAGAAAGCCGGCAA+AGG | - | chr3_1:85737572-85737591 | None:intergenic | 45.0% | |
| ! | TTTAGGGTATGTTGCGATGG+AGG | + | chr3_1:85738064-85738083 | Msa0382950:intron | 45.0% |
| TTAGGGTATGTTGCGATGGA+GGG | + | chr3_1:85738065-85738084 | Msa0382950:intron | 45.0% | |
| ! | TATGTTGCGATGGAGGGTTT+TGG | + | chr3_1:85738071-85738090 | Msa0382950:intron | 45.0% |
| ! | AGAACAATGGAGGCTCTAGT+GGG | - | chr3_1:85738293-85738312 | None:intergenic | 45.0% |
| ! | AAGAACAATGGAGGCTCTAG+TGG | - | chr3_1:85738294-85738313 | None:intergenic | 45.0% |
| AGTTGAAGTGACACCCTTTG+AGG | - | chr3_1:85738359-85738378 | None:intergenic | 45.0% | |
| !! | GTGTCACTTCAACTTTCTCC+CGG | + | chr3_1:85738365-85738384 | Msa0382950:intron | 45.0% |
| !! | CTAATTAAATAAAAAATAAA+AGG | + | chr3_1:85732154-85732173 | Msa0382950:intron | 5.0% |
| !! | AACAATTAAATAAAAATTAA+AGG | + | chr3_1:85732182-85732201 | Msa0382950:intron | 5.0% |
| !! | ACAATTAAATAAAAATTAAA+GGG | + | chr3_1:85732183-85732202 | Msa0382950:intron | 5.0% |
| !! | ATTTAAATAAATAAAACAAA+CGG | - | chr3_1:85732733-85732752 | None:intergenic | 5.0% |
| !! | TAATTAATAAATTTAATGAA+TGG | + | chr3_1:85734681-85734700 | Msa0382950:intron | 5.0% |
| !! | TAATTGTAAATATTAAAAAA+AGG | + | chr3_1:85736313-85736332 | Msa0382950:intron | 5.0% |
| !! | ATATAATAATAATATATCAA+TGG | + | chr3_1:85736617-85736636 | Msa0382950:intron | 5.0% |
| CTCTTCTCTTGCCGCTAGTT+AGG | + | chr3_1:85732329-85732348 | Msa0382950:intron | 50.0% | |
| TTTGATTCACCCAGTGCTGC+TGG | + | chr3_1:85732606-85732625 | Msa0382950:CDS | 50.0% | |
| ! | TTGATTCACCCAGTGCTGCT+GGG | + | chr3_1:85732607-85732626 | Msa0382950:CDS | 50.0% |
| CCATATAACCCAGCAGCACT+GGG | - | chr3_1:85732618-85732637 | None:intergenic | 50.0% | |
| ! | CCAGTGCTGCTGGGTTATAT+GGG | + | chr3_1:85732616-85732635 | Msa0382950:CDS | 50.0% |
| ! | CAGTGCTGCTGGGTTATATG+GGG | + | chr3_1:85732617-85732636 | Msa0382950:CDS | 50.0% |
| CTGCCTACCACCATCTATCA+TGG | + | chr3_1:85733386-85733405 | Msa0382950:intron | 50.0% | |
| CACGCTGCCACAAAACAACA+CGG | - | chr3_1:85733612-85733631 | None:intergenic | 50.0% | |
| TGCTCTGGCAATTGTCTGTG+AGG | + | chr3_1:85733813-85733832 | Msa0382950:intron | 50.0% | |
| CTGGCAATTGTCTGTGAGGA+TGG | + | chr3_1:85733817-85733836 | Msa0382950:intron | 50.0% | |
| TGTGAGGATGGAGTGGAGTA+GGG | + | chr3_1:85733829-85733848 | Msa0382950:intron | 50.0% | |
| ACAGCAAGGGAAGAAGAGTG+AGG | - | chr3_1:85734222-85734241 | None:intergenic | 50.0% | |
| ATTAGTGAGGTCAGTGGGAC+TGG | + | chr3_1:85734533-85734552 | Msa0382950:CDS | 50.0% | |
| TTAGTGAGGTCAGTGGGACT+GGG | + | chr3_1:85734534-85734553 | Msa0382950:CDS | 50.0% | |
| !!! | CCAGTTCCCTTTTGGTTCCA+AGG | - | chr3_1:85734566-85734585 | None:intergenic | 50.0% |
| CCTTGGAACCAAAAGGGAAC+TGG | + | chr3_1:85734563-85734582 | Msa0382950:CDS | 50.0% | |
| ! | TTGCTCGACCAGTTCCCTTT+TGG | - | chr3_1:85734574-85734593 | None:intergenic | 50.0% |
| AAAAGGGAACTGGTCGAGCA+AGG | + | chr3_1:85734573-85734592 | Msa0382950:CDS | 50.0% | |
| GGAGGAGGAATAAAATGGGC+TGG | - | chr3_1:85734648-85734667 | None:intergenic | 50.0% | |
| CAATAAGAAGGTTCGGCGAC+TGG | + | chr3_1:85734766-85734785 | Msa0382950:CDS | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr3_1:85735209-85735228 | None:intergenic | 50.0% |
| !! | CTCACCTTACAAGCCGGTTT+TGG | + | chr3_1:85735207-85735226 | Msa0382950:intron | 50.0% |
| GAGAAAACCTTAGGCAAGGC+CGG | + | chr3_1:85735454-85735473 | Msa0382950:intron | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | + | chr3_1:85735603-85735622 | Msa0382950:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | - | chr3_1:85735609-85735628 | None:intergenic | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | - | chr3_1:85735610-85735629 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | - | chr3_1:85735611-85735630 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | - | chr3_1:85735616-85735635 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr3_1:85735801-85735820 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | chr3_1:85735804-85735823 | None:intergenic | 50.0% | |
| ! | AATTGAAGAGTGGAGGCGTG+TGG | - | chr3_1:85735844-85735863 | None:intergenic | 50.0% |
| CACGCCTCCACTCTTCAATT+TGG | + | chr3_1:85735844-85735863 | Msa0382950:intron | 50.0% | |
| CCAACTATACAAAACCGGGG+TGG | - | chr3_1:85736708-85736727 | None:intergenic | 50.0% | |
| !! | CCACCCCGGTTTTGTATAGT+TGG | + | chr3_1:85736705-85736724 | Msa0382950:intron | 50.0% |
| !! | TGGCCTAACGGTTCTAGGAT+AGG | - | chr3_1:85736767-85736786 | None:intergenic | 50.0% |
| ! | CTTGATAGCAGGTGGCCTAA+CGG | - | chr3_1:85736779-85736798 | None:intergenic | 50.0% |
| ! | TCTGAAGCGTGACCTGATTG+TGG | - | chr3_1:85736805-85736824 | None:intergenic | 50.0% |
| AAAGGACAGCTGATGCAGTG+CGG | - | chr3_1:85737554-85737573 | None:intergenic | 50.0% | |
| !!! | TTGCGATGGAGGGTTTTGGA+GGG | + | chr3_1:85738075-85738094 | Msa0382950:intron | 50.0% |
| ! | CACCCTTTGAGGAGAAGATG+AGG | - | chr3_1:85738348-85738367 | None:intergenic | 50.0% |
| TTGAACAGTGAAGCGGCGAT+AGG | - | chr3_1:85738460-85738479 | None:intergenic | 50.0% | |
| CAAGAGCTCCGAGAACCAAC+AGG | - | chr3_1:85732276-85732295 | None:intergenic | 55.0% | |
| ! | CCCAGTGCTGCTGGGTTATA+TGG | + | chr3_1:85732615-85732634 | Msa0382950:CDS | 55.0% |
| CCCATATAACCCAGCAGCAC+TGG | - | chr3_1:85732619-85732638 | None:intergenic | 55.0% | |
| TCACGCTCAGATGTTGCGAG+AGG | - | chr3_1:85732835-85732854 | None:intergenic | 55.0% | |
| TTATGCTGCAGGGCTCTGTC+AGG | + | chr3_1:85733486-85733505 | Msa0382950:intron | 55.0% | |
| CTGTGAGGATGGAGTGGAGT+AGG | + | chr3_1:85733828-85733847 | Msa0382950:intron | 55.0% | |
| GTGAGGATGGAGTGGAGTAG+GGG | + | chr3_1:85733830-85733849 | Msa0382950:intron | 55.0% | |
| TGAGGATGGAGTGGAGTAGG+GGG | + | chr3_1:85733831-85733850 | Msa0382950:intron | 55.0% | |
| ATGGAGTGGAGTAGGGGGTT+GGG | + | chr3_1:85733836-85733855 | Msa0382950:intron | 55.0% | |
| !! | GTGTAGAGAGGCATCGGGTA+GGG | - | chr3_1:85734131-85734150 | None:intergenic | 55.0% |
| !! | TGTGTAGAGAGGCATCGGGT+AGG | - | chr3_1:85734132-85734151 | None:intergenic | 55.0% |
| GAACTGGTCGAGCAAGGCAT+GGG | + | chr3_1:85734579-85734598 | Msa0382950:CDS | 55.0% | |
| CAAGGCATGGGTCATTGCGT+GGG | + | chr3_1:85734591-85734610 | Msa0382950:CDS | 55.0% | |
| TTCCTCCTCCCATTCAGTGG+TGG | + | chr3_1:85734658-85734677 | Msa0382950:intron | 55.0% | |
| TACCACCACTGAATGGGAGG+AGG | - | chr3_1:85734663-85734682 | None:intergenic | 55.0% | |
| GAATGGCAACAGTTCAGGGG+TGG | + | chr3_1:85734698-85734717 | Msa0382950:intron | 55.0% | |
| AAAGCGTGACTTCGGGGCTT+AGG | - | chr3_1:85734740-85734759 | None:intergenic | 55.0% | |
| AGCTCGTGCAGCAGAAGGAA+AGG | + | chr3_1:85734808-85734827 | Msa0382950:intron | 55.0% | |
| !! | CCACCCAAAACCGGCTTGTA+AGG | - | chr3_1:85735214-85735233 | None:intergenic | 55.0% |
| !!! | CCTTACAAGCCGGTTTTGGG+TGG | + | chr3_1:85735211-85735230 | Msa0382950:intron | 55.0% |
| TTCTTGCACTCCCCAAGGTC+CGG | - | chr3_1:85735476-85735495 | None:intergenic | 55.0% | |
| ATAGGAACGGCCCTGACCTT+AGG | + | chr3_1:85735809-85735828 | Msa0382950:intron | 55.0% | |
| AGGACGTGGTACTGTTCTGG+TGG | + | chr3_1:85736333-85736352 | Msa0382950:intron | 55.0% | |
| GTGCATGGTAAATGCCACCC+CGG | + | chr3_1:85736691-85736710 | Msa0382950:intron | 55.0% | |
| AAGGACAGCTGATGCAGTGC+GGG | - | chr3_1:85737553-85737572 | None:intergenic | 55.0% | |
| CTGCATCAGCTGTCCTTTGC+CGG | + | chr3_1:85737556-85737575 | Msa0382950:intron | 55.0% | |
| !! | GTTGCGATGGAGGGTTTTGG+AGG | + | chr3_1:85738074-85738093 | Msa0382950:intron | 55.0% |
| !!! | TGCGATGGAGGGTTTTGGAG+GGG | + | chr3_1:85738076-85738095 | Msa0382950:intron | 55.0% |
| !!! | ATGGAGGGTTTTGGAGGGGA+GGG | + | chr3_1:85738080-85738099 | Msa0382950:intron | 55.0% |
| ! | GGAGGCTCTAGTGGGAAAAG+TGG | - | chr3_1:85738285-85738304 | None:intergenic | 55.0% |
| ATCAAAGCAGCGCCGTGCCA+AGG | - | chr3_1:85732592-85732611 | None:intergenic | 60.0% | |
| GCAGCGTGCAAAACGCCAAC+AGG | + | chr3_1:85733624-85733643 | Msa0382950:CDS | 60.0% | |
| GATGGAGTGGAGTAGGGGGT+TGG | + | chr3_1:85733835-85733854 | Msa0382950:intron | 60.0% | |
| !! | AGAGAGGCATCGGGTAGGGT+TGG | - | chr3_1:85734127-85734146 | None:intergenic | 60.0% |
| CAGAGGGCGGAAAAGACGCA+AGG | - | chr3_1:85734165-85734184 | None:intergenic | 60.0% | |
| GTGGGACTGGGAGAAAGCCT+TGG | + | chr3_1:85734546-85734565 | Msa0382950:CDS | 60.0% | |
| GGAACTGGTCGAGCAAGGCA+TGG | + | chr3_1:85734578-85734597 | Msa0382950:CDS | 60.0% | |
| GCAAGGCATGGGTCATTGCG+TGG | + | chr3_1:85734590-85734609 | Msa0382950:CDS | 60.0% | |
| AGGGGTGGTGAAGCGAAGCA+TGG | + | chr3_1:85734713-85734732 | Msa0382950:CDS | 60.0% | |
| CTGTCAGCTCGTGCAGCAGA+AGG | + | chr3_1:85734803-85734822 | Msa0382950:intron | 60.0% | |
| GTGTCTCTTGCCAGCTTGGC+TGG | - | chr3_1:85735025-85735044 | None:intergenic | 60.0% | |
| CTTAGGCAAGGCCGGACCTT+GGG | + | chr3_1:85735462-85735481 | Msa0382950:intron | 60.0% | |
| TTAGGCAAGGCCGGACCTTG+GGG | + | chr3_1:85735463-85735482 | Msa0382950:intron | 60.0% | |
| AGCGCTTCTTGCACTCCCCA+AGG | - | chr3_1:85735481-85735500 | None:intergenic | 60.0% | |
| GCAGGTGGCCTAACGGTTCT+AGG | - | chr3_1:85736772-85736791 | None:intergenic | 60.0% | |
| !!! | GATGGAGGGTTTTGGAGGGG+AGG | + | chr3_1:85738079-85738098 | Msa0382950:intron | 60.0% |
| GGGCGGAAAAGACGCAAGGC+AGG | - | chr3_1:85734161-85734180 | None:intergenic | 65.0% | |
| TGGGTCATTGCGTGGGCCTC+AGG | + | chr3_1:85734598-85734617 | Msa0382950:CDS | 65.0% | |
| CCAAGGTCCGGCCTTGCCTA+AGG | - | chr3_1:85735464-85735483 | None:intergenic | 65.0% | |
| CCTTAGGCAAGGCCGGACCT+TGG | + | chr3_1:85735461-85735480 | Msa0382950:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 85731521 | 85739064 | 85731521 | ID=Msa0382950;Name=Msa0382950 |
| chr3_1 | mRNA | 85731521 | 85739064 | 85731521 | ID=Msa0382950-mRNA-1;Parent=Msa0382950;Name=Msa0382950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.62|0.55|0.88|0.62|0.55|9|235|344 |
| chr3_1 | exon | 85731521 | 85731528 | 85731521 | ID=Msa0382950-mRNA-1:exon:22528;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85732204 | 85732345 | 85732204 | ID=Msa0382950-mRNA-1:exon:22529;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85732531 | 85732668 | 85732531 | ID=Msa0382950-mRNA-1:exon:22530;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85732757 | 85732859 | 85732757 | ID=Msa0382950-mRNA-1:exon:22531;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85733497 | 85733645 | 85733497 | ID=Msa0382950-mRNA-1:exon:22532;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85734512 | 85734619 | 85734512 | ID=Msa0382950-mRNA-1:exon:22533;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85734710 | 85734812 | 85734710 | ID=Msa0382950-mRNA-1:exon:22534;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85737818 | 85737984 | 85737818 | ID=Msa0382950-mRNA-1:exon:22535;Parent=Msa0382950-mRNA-1 |
| chr3_1 | exon | 85738713 | 85739064 | 85738713 | ID=Msa0382950-mRNA-1:exon:22536;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85731521 | 85731528 | 85731521 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85732204 | 85732345 | 85732204 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85732531 | 85732668 | 85732531 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85732757 | 85732859 | 85732757 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85733497 | 85733645 | 85733497 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85734512 | 85734619 | 85734512 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85734710 | 85734812 | 85734710 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85737818 | 85737984 | 85737818 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | CDS | 85738713 | 85738829 | 85738713 | ID=Msa0382950-mRNA-1:cds;Parent=Msa0382950-mRNA-1 |
| chr3_1 | three_prime_UTR | 85738830 | 85739064 | 85738830 | ID=Msa0382950-mRNA-1:three_prime_utr;Parent=Msa0382950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
