Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124850 | KAF5947646.1 | 84.211 | 323 | 36 | 2 | 87 | 408 | 44 | 352 | 1.18e-154 | 452 |
Msa1124850 | KAF5947646.1 | 87.333 | 150 | 18 | 1 | 83 | 231 | 203 | 352 | 6.14e-69 | 233 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124850 | sp|O65743|RL24_CICAR | 96.319 | 163 | 5 | 1 | 83 | 244 | 1 | 163 | 2.14e-106 | 314 |
Msa1124850 | sp|O65743|RL24_CICAR | 95.706 | 163 | 6 | 1 | 260 | 421 | 1 | 163 | 5.83e-106 | 313 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124850 | A0A7J7H784 | 84.211 | 323 | 36 | 2 | 87 | 408 | 44 | 352 | 5.65e-155 | 452 |
Msa1124850 | A0A7J7H784 | 87.333 | 150 | 18 | 1 | 83 | 231 | 203 | 352 | 2.93e-69 | 233 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002750 | Msa1124850 | 0.813974 | 1.950136e-51 | -8.615850e-47 |
Msa0040220 | Msa1124850 | 0.849938 | 2.344281e-60 | -8.615850e-47 |
Msa0044890 | Msa1124850 | 0.813533 | 2.438904e-51 | -8.615850e-47 |
Msa0047650 | Msa1124850 | 0.808219 | 3.449122e-50 | -8.615850e-47 |
Msa0068970 | Msa1124850 | 0.825181 | 5.392285e-54 | -8.615850e-47 |
Msa0087910 | Msa1124850 | 0.913183 | 8.264691e-84 | -8.615850e-47 |
Msa0114600 | Msa1124850 | 0.832582 | 8.708757e-56 | -8.615850e-47 |
Msa0602900 | Msa1124850 | 0.808255 | 3.387855e-50 | -8.615850e-47 |
Msa0605890 | Msa1124850 | 0.816521 | 5.298205e-52 | -8.615850e-47 |
Msa0608260 | Msa1124850 | 0.840651 | 7.647825e-58 | -8.615850e-47 |
Msa0643960 | Msa1124850 | 0.814692 | 1.353355e-51 | -8.615850e-47 |
Msa0653060 | Msa1124850 | 0.868354 | 6.949722e-66 | -8.615850e-47 |
Msa0691330 | Msa1124850 | 0.842321 | 2.777188e-58 | -8.615850e-47 |
Msa0694400 | Msa1124850 | 0.847151 | 1.386318e-59 | -8.615850e-47 |
Msa0741510 | Msa1124850 | 0.807636 | 4.589367e-50 | -8.615850e-47 |
Msa0749000 | Msa1124850 | 0.810739 | 9.923822e-51 | -8.615850e-47 |
Msa0788380 | Msa1124850 | 0.806541 | 7.823997e-50 | -8.615850e-47 |
Msa0796490 | Msa1124850 | 0.823813 | 1.131450e-53 | -8.615850e-47 |
Msa0128330 | Msa1124850 | 0.856872 | 2.398756e-62 | -8.615850e-47 |
Msa0134580 | Msa1124850 | 0.855756 | 5.096531e-62 | -8.615850e-47 |
Msa0167860 | Msa1124850 | 0.811024 | 8.611199e-51 | -8.615850e-47 |
Msa0174580 | Msa1124850 | 0.848987 | 4.316084e-60 | -8.615850e-47 |
Msa0183090 | Msa1124850 | 0.819980 | 8.731860e-53 | -8.615850e-47 |
Msa0184650 | Msa1124850 | 0.875098 | 4.025323e-68 | -8.615850e-47 |
Msa0186740 | Msa1124850 | 0.823670 | 1.222549e-53 | -8.615850e-47 |
Msa0187810 | Msa1124850 | 0.840122 | 1.051541e-57 | -8.615850e-47 |
Msa0191450 | Msa1124850 | 0.801348 | 9.392700e-49 | -8.615850e-47 |
Msa0191550 | Msa1124850 | 0.810262 | 1.258269e-50 | -8.615850e-47 |
Msa0192750 | Msa1124850 | 0.811859 | 5.671565e-51 | -8.615850e-47 |
Msa0194940 | Msa1124850 | 0.852855 | 3.509673e-61 | -8.615850e-47 |
Msa0210330 | Msa1124850 | 0.888849 | 4.098605e-73 | -8.615850e-47 |
Msa0210360 | Msa1124850 | 0.853732 | 1.967548e-61 | -8.615850e-47 |
Msa0222730 | Msa1124850 | 0.877790 | 4.737083e-69 | -8.615850e-47 |
Msa0223440 | Msa1124850 | 0.862639 | 4.396267e-64 | -8.615850e-47 |
Msa0235050 | Msa1124850 | 0.831020 | 2.114899e-55 | -8.615850e-47 |
Msa0369410 | Msa1124850 | 0.855610 | 5.622391e-62 | -8.615850e-47 |
Msa0382950 | Msa1124850 | 0.813864 | 2.062991e-51 | -8.615850e-47 |
Msa0426090 | Msa1124850 | 0.823151 | 1.616420e-53 | -8.615850e-47 |
Msa0426250 | Msa1124850 | 0.868629 | 5.666668e-66 | -8.615850e-47 |
Msa0463520 | Msa1124850 | 0.817476 | 3.233700e-52 | -8.615850e-47 |
Msa0471880 | Msa1124850 | 0.803964 | 2.710791e-49 | -8.615850e-47 |
Msa0472480 | Msa1124850 | 0.807249 | 5.543305e-50 | -8.615850e-47 |
Msa0475810 | Msa1124850 | 0.831254 | 1.852430e-55 | -8.615850e-47 |
Msa0481520 | Msa1124850 | 0.836737 | 7.854216e-57 | -8.615850e-47 |
Msa0481850 | Msa1124850 | 0.820213 | 7.726056e-53 | -8.615850e-47 |
Msa1040160 | Msa1124850 | 0.860409 | 2.107179e-63 | -8.615850e-47 |
Msa1050100 | Msa1124850 | 0.809048 | 2.293691e-50 | -8.615850e-47 |
Msa1078870 | Msa1124850 | 0.819753 | 9.843030e-53 | -8.615850e-47 |
Msa1078980 | Msa1124850 | 0.820049 | 8.422683e-53 | -8.615850e-47 |
Msa1079910 | Msa1124850 | 0.887431 | 1.435712e-72 | -8.615850e-47 |
Msa1079920 | Msa1124850 | 0.919395 | 4.751554e-87 | -8.615850e-47 |
Msa1080350 | Msa1124850 | 0.819802 | 9.591923e-53 | -8.615850e-47 |
Msa1081340 | Msa1124850 | 0.823225 | 1.553137e-53 | -8.615850e-47 |
Msa1083370 | Msa1124850 | 0.868568 | 5.927368e-66 | -8.615850e-47 |
Msa1093500 | Msa1124850 | 0.813199 | 2.889018e-51 | -8.615850e-47 |
Msa0250820 | Msa1124850 | 0.851868 | 6.704428e-61 | -8.615850e-47 |
Msa0250870 | Msa1124850 | 0.843429 | 1.408662e-58 | -8.615850e-47 |
Msa0264010 | Msa1124850 | 0.849252 | 3.643700e-60 | -8.615850e-47 |
Msa0264640 | Msa1124850 | 0.853646 | 2.082352e-61 | -8.615850e-47 |
Msa0277600 | Msa1124850 | 0.825622 | 4.240090e-54 | -8.615850e-47 |
Msa0297830 | Msa1124850 | 0.809709 | 1.655102e-50 | -8.615850e-47 |
Msa0301220 | Msa1124850 | 0.840057 | 1.093736e-57 | -8.615850e-47 |
Msa0312210 | Msa1124850 | 0.816233 | 6.147016e-52 | -8.615850e-47 |
Msa0315430 | Msa1124850 | 0.851855 | 6.761000e-61 | -8.615850e-47 |
Msa0335840 | Msa1124850 | 0.823040 | 1.715573e-53 | -8.615850e-47 |
Msa0339350 | Msa1124850 | 0.807981 | 3.876106e-50 | -8.615850e-47 |
Msa0341880 | Msa1124850 | 0.814249 | 1.696166e-51 | -8.615850e-47 |
Msa0342850 | Msa1124850 | 0.882066 | 1.422630e-70 | -8.615850e-47 |
Msa1124850 | Msa1125860 | 0.817333 | 3.481334e-52 | -8.615850e-47 |
Msa1124850 | Msa1126060 | 0.817045 | 4.042058e-52 | -8.615850e-47 |
Msa1124850 | Msa1128120 | 0.880047 | 7.571204e-70 | -8.615850e-47 |
Msa1124850 | Msa1167540 | 0.886290 | 3.890042e-72 | -8.615850e-47 |
Msa1124850 | Msa1167550 | 0.881514 | 2.253177e-70 | -8.615850e-47 |
Msa1124850 | Msa1169180 | 0.819511 | 1.117716e-52 | -8.615850e-47 |
Msa1124850 | Msa1180000 | 0.830970 | 2.175975e-55 | -8.615850e-47 |
Msa1124850 | Msa1203560 | 0.811435 | 7.010998e-51 | -8.615850e-47 |
Msa1124850 | Msa1208330 | 0.827272 | 1.714758e-54 | -8.615850e-47 |
Msa1124850 | Msa1215820 | 0.824296 | 8.716928e-54 | -8.615850e-47 |
Msa1124850 | Msa1270640 | 0.832704 | 8.121672e-56 | -8.615850e-47 |
Msa1124850 | Msa1270710 | 0.821220 | 4.533061e-53 | -8.615850e-47 |
Msa1124850 | Msa1284060 | 0.811299 | 7.503382e-51 | -8.615850e-47 |
Msa1124850 | Msa1295150 | 0.883200 | 5.484376e-71 | -8.615850e-47 |
Msa1124850 | Msa1295170 | 0.903351 | 3.796747e-79 | -8.615850e-47 |
Msa1124850 | Msa1311400 | 0.854463 | 1.210187e-61 | -8.615850e-47 |
Msa1124850 | Msa1341780 | 0.815410 | 9.377081e-52 | -8.615850e-47 |
Msa1124850 | Msa1351910 | 0.801876 | 7.320942e-49 | -8.615850e-47 |
Msa1124850 | Msa1385480 | 0.844788 | 6.084156e-59 | -8.615850e-47 |
Msa1124850 | Msa1397100 | 0.800221 | 1.595408e-48 | -8.615850e-47 |
Msa1124850 | Msa1397660 | 0.800651 | 1.304318e-48 | -8.615850e-47 |
Msa1124850 | Msa1426120 | 0.823894 | 1.083283e-53 | -8.615850e-47 |
Msa1124850 | Msa1463570 | 0.855856 | 4.762512e-62 | -8.615850e-47 |
Msa0486070 | Msa1124850 | 0.810043 | 1.402126e-50 | -8.615850e-47 |
Msa0529900 | Msa1124850 | 0.847109 | 1.423167e-59 | -8.615850e-47 |
Msa0544720 | Msa1124850 | 0.840352 | 9.154486e-58 | -8.615850e-47 |
Msa0547920 | Msa1124850 | 0.826461 | 2.679212e-54 | -8.615850e-47 |
Msa0554210 | Msa1124850 | 0.832799 | 7.693560e-56 | -8.615850e-47 |
Msa0557720 | Msa1124850 | 0.807099 | 5.963621e-50 | -8.615850e-47 |
Msa0573550 | Msa1124850 | 0.814200 | 1.739067e-51 | -8.615850e-47 |
Msa0848240 | Msa1124850 | 0.849924 | 2.365293e-60 | -8.615850e-47 |
Msa0902220 | Msa1124850 | 0.831457 | 1.651419e-55 | -8.615850e-47 |
Msa0927910 | Msa1124850 | 0.825997 | 3.453827e-54 | -8.615850e-47 |
Msa0929700 | Msa1124850 | 0.818865 | 1.568270e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124850 | MtrunA17_Chr7g0265501 | 100.000 | 163 | 0 | 0 | 83 | 245 | 1 | 163 | 3.04e-113 | 328 |
Msa1124850 | MtrunA17_Chr7g0265501 | 99.387 | 163 | 1 | 0 | 260 | 422 | 1 | 163 | 8.56e-113 | 327 |
Msa1124850 | MtrunA17_Chr7g0265491 | 100.000 | 163 | 0 | 0 | 83 | 245 | 1 | 163 | 3.04e-113 | 328 |
Msa1124850 | MtrunA17_Chr7g0265491 | 99.387 | 163 | 1 | 0 | 260 | 422 | 1 | 163 | 8.56e-113 | 327 |
Msa1124850 | MtrunA17_Chr1g0179601 | 95.333 | 150 | 6 | 1 | 83 | 231 | 1 | 150 | 5.67e-86 | 259 |
Msa1124850 | MtrunA17_Chr1g0179601 | 94.667 | 150 | 7 | 1 | 260 | 408 | 1 | 150 | 1.71e-85 | 258 |
Msa1124850 | MtrunA17_Chr4g0027111 | 37.895 | 95 | 57 | 1 | 262 | 354 | 1 | 95 | 5.05e-17 | 78.2 |
Msa1124850 | MtrunA17_Chr4g0027111 | 36.842 | 95 | 58 | 1 | 85 | 177 | 1 | 95 | 1.34e-16 | 77.0 |
Msa1124850 | MtrunA17_Chr4g0058481 | 87.805 | 41 | 4 | 1 | 138 | 178 | 1 | 40 | 2.11e-15 | 69.7 |
Msa1124850 | MtrunA17_Chr4g0058481 | 87.805 | 41 | 4 | 1 | 315 | 355 | 1 | 40 | 2.11e-15 | 69.7 |
Msa1124850 | MtrunA17_Chr2g0321011 | 35.484 | 93 | 58 | 1 | 262 | 352 | 1 | 93 | 1.24e-13 | 68.6 |
Msa1124850 | MtrunA17_Chr2g0321011 | 34.409 | 93 | 59 | 1 | 85 | 175 | 1 | 93 | 3.05e-13 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1124850 | AT2G36620.1 | 89.172 | 157 | 16 | 1 | 260 | 415 | 1 | 157 | 1.04e-84 | 256 |
Msa1124850 | AT2G36620.1 | 89.172 | 157 | 16 | 1 | 83 | 238 | 1 | 157 | 1.45e-84 | 256 |
Msa1124850 | AT3G53020.1 | 89.933 | 149 | 14 | 1 | 260 | 408 | 1 | 148 | 7.55e-80 | 244 |
Msa1124850 | AT3G53020.1 | 89.933 | 149 | 14 | 1 | 83 | 231 | 1 | 148 | 1.12e-79 | 243 |
Msa1124850 | AT2G44860.2 | 37.500 | 128 | 67 | 5 | 262 | 385 | 1 | 119 | 1.96e-16 | 76.6 |
Msa1124850 | AT2G44860.2 | 36.719 | 128 | 68 | 5 | 85 | 208 | 1 | 119 | 5.06e-16 | 75.5 |
Msa1124850 | AT2G44860.1 | 37.500 | 128 | 67 | 5 | 262 | 385 | 1 | 119 | 1.96e-16 | 76.6 |
Msa1124850 | AT2G44860.1 | 36.719 | 128 | 68 | 5 | 85 | 208 | 1 | 119 | 5.06e-16 | 75.5 |
Find 136 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAAAATCAATTTAATATC+TGG | 0.154677 | 7_3:-76084848 | None:intergenic |
AGATGCTACTTCGGCTTTCT+TGG | 0.236901 | 7_3:-76080606 | None:intergenic |
AGATGCTACCTCGGCTTTCT+TGG | 0.251083 | 7_3:-76084608 | None:intergenic |
CCTAAAATGGGCGGTGGTGG+TGG | 0.259183 | 7_3:+76080683 | Msa1124850:CDS |
CCTAAAATGGGCGGTGGTGG+CGG | 0.273790 | 7_3:+76084685 | Msa1124850:CDS |
TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7_3:+76080670 | Msa1124850:CDS |
TATGCCCAAGGGTCCTAAAA+TGG | 0.286938 | 7_3:+76084672 | Msa1124850:CDS |
CTTGGCTTTCTTCTCATCCT+TGG | 0.290844 | 7_3:-76080588 | None:intergenic |
ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7_3:-76080341 | None:intergenic |
ATCTCGAACCTCGGGCTTCT+CGG | 0.307520 | 7_3:-76084243 | None:intergenic |
CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7_3:-76079984 | None:intergenic |
CTTGTGCTGCTTTCTGTACA+TGG | 0.329814 | 7_3:-76083885 | None:intergenic |
TGATAAAACAGTAACATAAA+AGG | 0.351434 | 7_3:-76084797 | None:intergenic |
GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7_3:-76080278 | None:intergenic |
GGACCTGGAGTATGGCTTCT+TGG | 0.357806 | 7_3:-76084180 | None:intergenic |
GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7_3:-76079962 | None:intergenic |
GCAGTCCATGTGAGCTTTGA+AGG | 0.357906 | 7_3:-76083863 | None:intergenic |
GAAAGCCGAAGTAGCATCTA+AGG | 0.360444 | 7_3:+76080610 | Msa1124850:CDS |
GAAAGCCGAGGTAGCATCTA+AGG | 0.361381 | 7_3:+76084612 | Msa1124850:CDS |
CTCAAGAAGCGGTGAAGAAA+AGG | 0.395866 | 7_3:+76084147 | Msa1124850:CDS |
ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_3:-76078692 | None:intergenic |
ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_3:-76079731 | None:intergenic |
ATAAATCTGATCCCTCTTCC+TGG | 0.395884 | 7_3:-76083629 | None:intergenic |
TTCAGCTTTCCTACTAATCC+TGG | 0.403275 | 7_3:+76085033 | Msa1124850:three_prime_UTR |
GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7_3:+76080623 | Msa1124850:CDS |
GCATCTAAGGCACAAAAGTC+AGG | 0.405098 | 7_3:+76084625 | Msa1124850:CDS |
CTAAAATGGGCGGTGGTGGC+GGG | 0.411135 | 7_3:+76084686 | Msa1124850:CDS |
CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7_3:-76080286 | None:intergenic |
CCAACAATGGACCTGGAGTA+TGG | 0.414209 | 7_3:-76084188 | None:intergenic |
ATAGACCGGGTTATTTCAAA+TGG | 0.414383 | 7_3:+76077895 | Msa1124850:CDS |
TTCCTCTTTGTGAACTCAAA+AGG | 0.414792 | 7_3:+76078872 | Msa1124850:CDS |
GGTCCTAAAATGGGCGGTGG+TGG | 0.415686 | 7_3:+76084682 | Msa1124850:CDS |
ATCAAGCAAACAAAATATAT+CGG | 0.421334 | 7_3:-76084771 | None:intergenic |
ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_3:+76078709 | Msa1124850:CDS |
ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_3:+76079748 | Msa1124850:CDS |
ATTTATTCGTAGTGATTCTC+AGG | 0.428494 | 7_3:+76083646 | Msa1124850:CDS |
GCAAAATCAATTTAATATCT+GGG | 0.429649 | 7_3:-76084847 | None:intergenic |
CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7_3:-76080350 | None:intergenic |
CCTAGCAGCATCTCGAACCT+CGG | 0.438375 | 7_3:-76084252 | None:intergenic |
GGTCCTAAAATGGGCGGTGG+TGG | 0.445895 | 7_3:+76080680 | Msa1124850:CDS |
TTGAAAGAACCAGGATTAGT+AGG | 0.447511 | 7_3:-76085042 | None:intergenic |
GTCAGTACTTGGCACTTGTT+CGG | 0.456719 | 7_3:+76084950 | Msa1124850:three_prime_UTR |
TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7_3:+76079918 | Msa1124850:CDS |
TTGTGAACTCAAAATGTAAG+AGG | 0.457107 | 7_3:+76083819 | Msa1124850:CDS |
TCAAAGATTTACCCAGGAAG+AGG | 0.465260 | 7_3:+76083617 | Msa1124850:CDS |
TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7_3:-76079946 | None:intergenic |
TTGAAGGCTTCAACTTGTTG+TGG | 0.467148 | 7_3:-76083847 | None:intergenic |
GCAAAGATTTACCCAGGAAG+AGG | 0.473275 | 7_3:+76078680 | Msa1124850:CDS |
GCAAAGATTTACCCAGGAAG+AGG | 0.473275 | 7_3:+76079719 | Msa1124850:CDS |
ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7_3:+76080671 | Msa1124850:CDS |
ATGCCCAAGGGTCCTAAAAT+GGG | 0.479062 | 7_3:+76084673 | Msa1124850:CDS |
CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7_3:+76080365 | Msa1124850:CDS |
CTGCTAGGGAAGCTGCTCTT+CGG | 0.488937 | 7_3:+76084267 | Msa1124850:CDS |
CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7_3:+76080286 | Msa1124850:CDS |
CCATACTCCAGGTCCATTGT+TGG | 0.499932 | 7_3:+76084188 | Msa1124850:CDS |
TCAATCCTGCAGTGAAATCA+AGG | 0.504323 | 7_3:+76084552 | Msa1124850:intron |
TCAATCCCGCAGTGAAATCA+AGG | 0.506619 | 7_3:+76080550 | Msa1124850:intron |
AAATACAAATGAATATAGAC+CGG | 0.508914 | 7_3:+76077881 | None:intergenic |
CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7_3:-76080349 | None:intergenic |
CTAGCAGCATCTCGAACCTC+GGG | 0.515819 | 7_3:-76084251 | None:intergenic |
CTAAAATGGGCGGTGGTGGT+GGG | 0.525722 | 7_3:+76080684 | Msa1124850:CDS |
CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7_3:+76080350 | Msa1124850:CDS |
CCGAGGTTCGAGATGCTGCT+AGG | 0.531808 | 7_3:+76084252 | Msa1124850:CDS |
CTCAAGAAGCGGTGAAGAAG+AGG | 0.534219 | 7_3:+76080245 | Msa1124850:CDS |
CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7_3:+76080351 | Msa1124850:CDS |
CGAGGTTCGAGATGCTGCTA+GGG | 0.538000 | 7_3:+76084253 | Msa1124850:CDS |
TTGTGCCTTAGATGCTACTT+CGG | 0.538791 | 7_3:-76080615 | None:intergenic |
AGGGAAAGGCAATGTTCAGA+AGG | 0.551183 | 7_3:+76080643 | Msa1124850:CDS |
TAGACCGGGTTATTTCAAAT+GGG | 0.552305 | 7_3:+76077896 | Msa1124850:CDS |
CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7_3:-76080275 | None:intergenic |
CCTGGAGTATGGCTTCTTGG+TGG | 0.554085 | 7_3:-76084177 | None:intergenic |
TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_3:-76078691 | None:intergenic |
TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_3:-76079730 | None:intergenic |
TAAATCTGATCCCTCTTCCT+GGG | 0.554260 | 7_3:-76083628 | None:intergenic |
TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7_3:+76079957 | Msa1124850:CDS |
TGAAGCCTTCAAAGCTCACA+TGG | 0.563280 | 7_3:+76083858 | Msa1124850:CDS |
CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_3:+76078011 | Msa1124850:CDS |
CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_3:+76079051 | Msa1124850:CDS |
CCACATCAACGAAGCAGCCA+TGG | 0.569926 | 7_3:+76082959 | Msa1124850:CDS |
TTGTGCCTTAGATGCTACCT+CGG | 0.575585 | 7_3:-76084617 | None:intergenic |
CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_3:-76078011 | None:intergenic |
CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_3:-76079051 | None:intergenic |
CCATGGCTGCTTCGTTGATG+TGG | 0.576982 | 7_3:-76082959 | None:intergenic |
AGGGAAGGGAAATGTTCAGA+AGG | 0.577296 | 7_3:+76084645 | Msa1124850:CDS |
TGGCTGCTTCGTTGATGTGG+TGG | 0.577916 | 7_3:-76078008 | None:intergenic |
TGGCTGCTTCGTTGATGTGG+TGG | 0.577916 | 7_3:-76079048 | None:intergenic |
TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7_3:-76080299 | None:intergenic |
TTCAAGTGTAGCACCAACAA+TGG | 0.581573 | 7_3:-76084201 | None:intergenic |
AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7_3:+76080677 | Msa1124850:CDS |
AAGGGTCCTAAAATGGGCGG+TGG | 0.584819 | 7_3:+76084679 | Msa1124850:CDS |
TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7_3:+76080658 | Msa1124850:CDS |
TCAGAAGGGTGCTATGCCCA+AGG | 0.589737 | 7_3:+76084660 | Msa1124850:CDS |
ATTCTGAACTTGAAAGAACC+AGG | 0.593565 | 7_3:-76085051 | None:intergenic |
TAAGGCACAAAAGTCAGGGA+AGG | 0.594983 | 7_3:+76084630 | Msa1124850:CDS |
CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_3:+76078681 | Msa1124850:CDS |
CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_3:+76079720 | Msa1124850:CDS |
CAAAGATTTACCCAGGAAGA+GGG | 0.595056 | 7_3:+76083618 | Msa1124850:CDS |
ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_3:+76078656 | Msa1124850:CDS |
ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_3:+76079695 | Msa1124850:CDS |
ACTGAACTCTGTCGATTCAG+TGG | 0.599671 | 7_3:+76083593 | Msa1124850:CDS |
CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7_3:+76080275 | Msa1124850:CDS |
CCACCAAGAAGCCATACTCC+AGG | 0.600767 | 7_3:+76084177 | Msa1124850:CDS |
TGGCTGCTTCGTTGATGTGG+TGG | 0.600894 | 7_3:-76082956 | None:intergenic |
AAGGCACAAAAGTCAGGGAA+AGG | 0.600921 | 7_3:+76080629 | Msa1124850:CDS |
CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7_3:+76080659 | Msa1124850:CDS |
CAGAAGGGTGCTATGCCCAA+GGG | 0.602938 | 7_3:+76084661 | Msa1124850:CDS |
TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_3:-76078028 | None:intergenic |
TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_3:-76079068 | None:intergenic |
TAAAACTTACTTTAGAACCA+TGG | 0.603222 | 7_3:-76082976 | None:intergenic |
AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7_3:-76080270 | None:intergenic |
AGTATGGCTTCTTGGTGGCA+CGG | 0.604625 | 7_3:-76084172 | None:intergenic |
CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7_3:+76080624 | Msa1124850:CDS |
CATCTAAGGCACAAAAGTCA+GGG | 0.612277 | 7_3:+76084626 | Msa1124850:CDS |
TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7_3:-76080293 | None:intergenic |
TGTAGCACCAACAATGGACC+TGG | 0.616016 | 7_3:-76084195 | None:intergenic |
TGGGCCCATTTGAAATAACC+CGG | 0.618483 | 7_3:-76077900 | None:intergenic |
AATACAAATGAATATAGACC+GGG | 0.621739 | 7_3:+76077882 | None:intergenic |
AAGGCACAAAAGTCAGGGAA+GGG | 0.622311 | 7_3:+76084631 | Msa1124850:CDS |
AGTGGCTCAAAGATTTACCC+AGG | 0.630927 | 7_3:+76083611 | Msa1124850:CDS |
GTACAGAAAGCAGCACAAGA+AGG | 0.637862 | 7_3:+76079988 | Msa1124850:CDS |
GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7_3:+76080333 | Msa1124850:CDS |
GAAAAGAACCGAGAAGCCCG+AGG | 0.642434 | 7_3:+76084235 | Msa1124850:CDS |
AGTGGCGCAAAGATTTACCC+AGG | 0.643624 | 7_3:+76078674 | Msa1124850:CDS |
AGTGGCGCAAAGATTTACCC+AGG | 0.643624 | 7_3:+76079713 | Msa1124850:CDS |
GCAGGACATTGCTCAAGAAG+CGG | 0.647206 | 7_3:+76084136 | Msa1124850:intron |
GTACAGAAAGCAGCACAAGA+AGG | 0.650232 | 7_3:+76083889 | Msa1124850:CDS |
CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7_3:+76080674 | Msa1124850:CDS |
CCCAAGGGTCCTAAAATGGG+CGG | 0.653433 | 7_3:+76084676 | Msa1124850:CDS |
GGGAAGGGAAATGTTCAGAA+GGG | 0.653491 | 7_3:+76084646 | Msa1124850:CDS |
GGGAAAGGCAATGTTCAGAA+GGG | 0.656870 | 7_3:+76080644 | Msa1124850:CDS |
GCAGGACATTGCTCAAGAAG+CGG | 0.663218 | 7_3:+76080234 | Msa1124850:intron |
AAAGAAAGCCAAGAAAGCCG+AGG | 0.666450 | 7_3:+76084600 | Msa1124850:CDS |
CCCGCAGTGAAATCAAGGAG+AGG | 0.678239 | 7_3:+76080555 | Msa1124850:intron |
GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7_3:+76080571 | Msa1124850:CDS |
GGAGAGGATAAAGAAAACCA+AGG | 0.682479 | 7_3:+76084573 | Msa1124850:CDS |
CCTGCAGTGAAATCAAGGAG+AGG | 0.683831 | 7_3:+76084557 | Msa1124850:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGAAAAAAAAAAAAAAAAG+AGG | - | chr7_3:76080425-76080444 | None:intergenic | 10.0% |
!!! | TCTTTTTTTTTTTTTTTTCA+TGG | + | chr7_3:76080424-76080443 | Msa1124850:intron | 10.0% |
!!! | TGTCAATTTTATTTATTTTT+TGG | + | chr7_3:76082643-76082662 | Msa1124850:intron | 10.0% |
!!! | TTTTTTTTTATTGTTTTTAC+AGG | + | chr7_3:76083787-76083806 | Msa1124850:intron | 10.0% |
!!! | TTTTTTTTTTTTCTTTCTTT+CGG | + | chr7_3:76084342-76084361 | Msa1124850:intron | 10.0% |
!!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7_3:76078821-76078840 | Msa1124850:intron | 15.0% |
!!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7_3:76078847-76078866 | Msa1124850:intron | 15.0% |
!!! | ATCTTAGTTTTATTGATATA+AGG | + | chr7_3:76078821-76078840 | Msa1124850:intron | 15.0% |
!!! | GTTTTTTTTATTGTTTTTAC+AGG | + | chr7_3:76078847-76078866 | Msa1124850:intron | 15.0% |
!! | GAAAACAAATTATATTTAGA+TGG | - | chr7_3:76080738-76080757 | None:intergenic | 15.0% |
!! | AATCATAATAAAGATGTATT+AGG | + | chr7_3:76081037-76081056 | Msa1124850:intron | 15.0% |
!! | TTACAAACAAAAATAAAAAG+TGG | + | chr7_3:76081178-76081197 | Msa1124850:intron | 15.0% |
!! | TTATTTACGAAATCAAATAA+GGG | - | chr7_3:76081644-76081663 | None:intergenic | 15.0% |
!! | ATTATTTACGAAATCAAATA+AGG | - | chr7_3:76081645-76081664 | None:intergenic | 15.0% |
!! | TAAATTAAAAAATACACAAG+TGG | + | chr7_3:76081687-76081706 | Msa1124850:intron | 15.0% |
!!! | TTTAAATAGAAATTTTGTCT+TGG | - | chr7_3:76081927-76081946 | None:intergenic | 15.0% |
!!! | TTTTGACTCTATTAAAAAAA+GGG | - | chr7_3:76081990-76082009 | None:intergenic | 15.0% |
!!! | ATTTTGACTCTATTAAAAAA+AGG | - | chr7_3:76081991-76082010 | None:intergenic | 15.0% |
!!! | AAAACTTTATTCTAAAACAA+AGG | - | chr7_3:76082231-76082250 | None:intergenic | 15.0% |
!! | AAAAACTTTAACTAAAGAAT+TGG | + | chr7_3:76082402-76082421 | Msa1124850:intron | 15.0% |
!! | AAATTGATAAAACTATTGAA+AGG | - | chr7_3:76082575-76082594 | None:intergenic | 15.0% |
!! | AATTTCGACAAAATATTATA+TGG | - | chr7_3:76082620-76082639 | None:intergenic | 15.0% |
!!! | TTTTATTTATTTTTTGGTAC+AGG | + | chr7_3:76082649-76082668 | Msa1124850:intron | 15.0% |
!! | TTTGGTATTTATTATTATCT+AGG | + | chr7_3:76083202-76083221 | Msa1124850:intron | 15.0% |
!! | CTAAAAATTGAAATTACAAT+AGG | - | chr7_3:76083365-76083384 | None:intergenic | 15.0% |
!! | AAAAAAGAAAAAAAAAAGAG+AGG | - | chr7_3:76084325-76084344 | None:intergenic | 15.0% |
!!! | GAAAACAAACTATATTTTAA+TGG | - | chr7_3:76084740-76084759 | None:intergenic | 15.0% |
!!! | AGCTTTTGATATTAGTTTTT+AGG | + | chr7_3:76077964-76077983 | Msa1124850:intron | 20.0% |
!!! | GCTTTTGATATTAGTTTTTA+GGG | + | chr7_3:76077965-76077984 | Msa1124850:intron | 20.0% |
!! | TATTGTATTTGAGAATTTGA+TGG | + | chr7_3:76078160-76078179 | Msa1124850:intron | 20.0% |
!! | TTTGATGGAATGTAAAATTT+CGG | + | chr7_3:76078175-76078194 | Msa1124850:intron | 20.0% |
!!! | CAAAATTCTAAAAATCTGTT+TGG | + | chr7_3:76078246-76078265 | Msa1124850:intron | 20.0% |
!! | AAATCAACCAAAGTTATAAT+GGG | - | chr7_3:76078338-76078357 | None:intergenic | 20.0% |
!! | TAAATCAACCAAAGTTATAA+TGG | - | chr7_3:76078339-76078358 | None:intergenic | 20.0% |
!!! | TGGAAATTTAGATATGTTTT+TGG | + | chr7_3:76078391-76078410 | Msa1124850:intron | 20.0% |
!!! | CAATTTCAATTTTTAATGAG+TGG | + | chr7_3:76078430-76078449 | Msa1124850:intron | 20.0% |
!! | TCTTTAAATTAGCTATTAGA+AGG | + | chr7_3:76078476-76078495 | Msa1124850:intron | 20.0% |
!!! | TTGTATTTTGATTGAATTAG+TGG | + | chr7_3:76078569-76078588 | Msa1124850:intron | 20.0% |
!!! | TGTATTTTGATTGAATTAGT+GGG | + | chr7_3:76078570-76078589 | Msa1124850:intron | 20.0% |
!! | AAATACAAATGAATATAGAC+CGG | + | chr7_3:76078921-76078940 | Msa1124850:intron | 20.0% |
!!! | AGCTTTTGATATTAGTTTTT+AGG | + | chr7_3:76077964-76077983 | Msa1124850:intron | 20.0% |
!!! | GCTTTTGATATTAGTTTTTA+GGG | + | chr7_3:76077965-76077984 | Msa1124850:intron | 20.0% |
!! | TATTGTATTTGAGAATTTGA+TGG | + | chr7_3:76078160-76078179 | Msa1124850:intron | 20.0% |
!! | TTTGATGGAATGTAAAATTT+CGG | + | chr7_3:76078175-76078194 | Msa1124850:intron | 20.0% |
!!! | CAAAATTCTAAAAATCTGTT+TGG | + | chr7_3:76078246-76078265 | Msa1124850:intron | 20.0% |
!! | AAATCAACCAAAGTTATAAT+GGG | - | chr7_3:76078338-76078357 | None:intergenic | 20.0% |
!! | TAAATCAACCAAAGTTATAA+TGG | - | chr7_3:76078339-76078358 | None:intergenic | 20.0% |
!!! | TGGAAATTTAGATATGTTTT+TGG | + | chr7_3:76078391-76078410 | Msa1124850:intron | 20.0% |
!! | TCTTTAAATTAGCTATTAGA+AGG | + | chr7_3:76078476-76078495 | Msa1124850:intron | 20.0% |
!!! | TTGTATTTTGATTGAATTAG+TGG | + | chr7_3:76078569-76078588 | Msa1124850:intron | 20.0% |
!!! | TGTATTTTGATTGAATTAGT+GGG | + | chr7_3:76078570-76078589 | Msa1124850:intron | 20.0% |
!! | AGTAGTAAAATTACTAAACA+AGG | - | chr7_3:76080176-76080195 | None:intergenic | 20.0% |
!! | ATCAAGCAAACAAAATATAT+CGG | - | chr7_3:76080772-76080791 | None:intergenic | 20.0% |
!! | TGATAAAACAGTAACATAAA+AGG | - | chr7_3:76080798-76080817 | None:intergenic | 20.0% |
!!! | TGTTTTATCAAACTTATGTT+TGG | + | chr7_3:76080808-76080827 | Msa1124850:intron | 20.0% |
!! | ACACTATATAAATGAATGTT+TGG | - | chr7_3:76081280-76081299 | None:intergenic | 20.0% |
!! | ATTGATCAATTAAACCTTTA+AGG | + | chr7_3:76081398-76081417 | Msa1124850:intron | 20.0% |
!! | TATTTACGAAATCAAATAAG+GGG | - | chr7_3:76081643-76081662 | None:intergenic | 20.0% |
!! | GATTTCGTAAATAATATATG+TGG | + | chr7_3:76081650-76081669 | Msa1124850:intron | 20.0% |
!! | AAAGTTGAGATATTGTAAAA+GGG | + | chr7_3:76081756-76081775 | Msa1124850:intron | 20.0% |
!!! | TCAAAATTGCTATTTTTGTA+AGG | + | chr7_3:76081793-76081812 | Msa1124850:intron | 20.0% |
!!! | TTATAAAAGCTTACCAATTT+TGG | - | chr7_3:76081858-76081877 | None:intergenic | 20.0% |
!!! | ATTGGTAAGCTTTTATAAAA+AGG | + | chr7_3:76081860-76081879 | Msa1124850:intron | 20.0% |
!! | GAAAGTTAATAGGTAAAAAA+TGG | + | chr7_3:76082022-76082041 | Msa1124850:intron | 20.0% |
!!! | TTGACAAACAAAAAGTTTTA+TGG | - | chr7_3:76082724-76082743 | None:intergenic | 20.0% |
!! | AATACTCATCCATAATTATT+TGG | + | chr7_3:76082776-76082795 | Msa1124850:intron | 20.0% |
!! | ATACTCATCCATAATTATTT+GGG | + | chr7_3:76082777-76082796 | Msa1124850:intron | 20.0% |
!! | AAGTATAATTCAATATAGAC+CGG | + | chr7_3:76082829-76082848 | Msa1124850:intron | 20.0% |
!!! | AGCTTTTGATATTAGTTTTT+AGG | + | chr7_3:76077964-76077983 | Msa1124850:intron | 20.0% |
!!! | GCTTTTGATATTAGTTTTTA+GGG | + | chr7_3:76077965-76077984 | Msa1124850:intron | 20.0% |
!! | AAAATTGAATGTGTAAATGA+TGG | - | chr7_3:76083017-76083036 | None:intergenic | 20.0% |
!!! | TCATTTACACATTCAATTTT+AGG | + | chr7_3:76083017-76083036 | Msa1124850:intron | 20.0% |
!!! | CATTTACACATTCAATTTTA+GGG | + | chr7_3:76083018-76083037 | Msa1124850:intron | 20.0% |
!!! | CTAAAGTCTAAAAATTTGTT+TGG | + | chr7_3:76083184-76083203 | Msa1124850:intron | 20.0% |
!!! | TTGAAAATTAGACATGTTTT+TGG | + | chr7_3:76083331-76083350 | Msa1124850:intron | 20.0% |
!!! | TAATTTCAATTTTTAGTGAG+TGG | + | chr7_3:76083369-76083388 | Msa1124850:intron | 20.0% |
!!! | ATTTTAATGGTAACCAAAAA+TGG | - | chr7_3:76084727-76084746 | None:intergenic | 20.0% |
!! | ATCAAGCAAACAAAATATAT+CGG | - | chr7_3:76080772-76080791 | None:intergenic | 20.0% |
!! | TGATAAAACAGTAACATAAA+AGG | - | chr7_3:76080798-76080817 | None:intergenic | 20.0% |
!!! | TGTTTTATCAAACTTATGTT+TGG | + | chr7_3:76080808-76080827 | Msa1124850:intron | 20.0% |
!! | GCAAAATCAATTTAATATCT+GGG | - | chr7_3:76084850-76084869 | None:intergenic | 20.0% |
!! | AGCAAAATCAATTTAATATC+TGG | - | chr7_3:76084851-76084870 | None:intergenic | 20.0% |
!!! | TGTTTGATTATAAGTTTTAC+TGG | + | chr7_3:76084928-76084947 | Msa1124850:three_prime_UTR | 20.0% |
!!! | TATATACCCGTTTTTGTATT+GGG | - | chr7_3:76077922-76077941 | None:intergenic | 25.0% |
! | AAACTAATATCAAAAGCTCT+TGG | - | chr7_3:76077962-76077981 | None:intergenic | 25.0% |
!!! | TAAAACTTACTTTAGAACCA+TGG | - | chr7_3:76078031-76078050 | None:intergenic | 25.0% |
! | AAAACTGAATGTGTAAATGA+TGG | - | chr7_3:76078069-76078088 | None:intergenic | 25.0% |
!! | TCATTTACACATTCAGTTTT+AGG | + | chr7_3:76078069-76078088 | Msa1124850:intron | 25.0% |
!! | CATTTACACATTCAGTTTTA+GGG | + | chr7_3:76078070-76078089 | Msa1124850:intron | 25.0% |
! | GATTCATCAACTAAACATTA+CGG | - | chr7_3:76078128-76078147 | None:intergenic | 25.0% |
! | ATAATCATAGAACACTGTTT+CGG | - | chr7_3:76078211-76078230 | None:intergenic | 25.0% |
!! | TTTGCAATTTTTGATGCTAT+TGG | + | chr7_3:76078371-76078390 | Msa1124850:intron | 25.0% |
! | CAAAATACAATAACAGTGAA+TGG | - | chr7_3:76078559-76078578 | None:intergenic | 25.0% |
! | AATACAAATGAATATAGACC+GGG | + | chr7_3:76078922-76078941 | Msa1124850:intron | 25.0% |
!!! | TATATACCCGTTTTTGTATT+GGG | - | chr7_3:76077922-76077941 | None:intergenic | 25.0% |
! | AAACTAATATCAAAAGCTCT+TGG | - | chr7_3:76077962-76077981 | None:intergenic | 25.0% |
!!! | TAAAACTTACTTTAGAACCA+TGG | - | chr7_3:76078031-76078050 | None:intergenic | 25.0% |
! | AAAACTGAATGTGTAAATGA+TGG | - | chr7_3:76078069-76078088 | None:intergenic | 25.0% |
!! | TCATTTACACATTCAGTTTT+AGG | + | chr7_3:76078069-76078088 | Msa1124850:intron | 25.0% |
!! | CATTTACACATTCAGTTTTA+GGG | + | chr7_3:76078070-76078089 | Msa1124850:intron | 25.0% |
! | GATTCATCAACTAAACATTA+CGG | - | chr7_3:76078128-76078147 | None:intergenic | 25.0% |
! | ATAATCATAGAACACTGTTT+CGG | - | chr7_3:76078211-76078230 | None:intergenic | 25.0% |
!! | TTTGCAATTTTTGATGCTAT+TGG | + | chr7_3:76078371-76078390 | Msa1124850:intron | 25.0% |
!!! | GCAATTTCAATTTTAATGAG+TGG | + | chr7_3:76079469-76079488 | Msa1124850:intron | 25.0% |
! | CAAAATACAATAACAGTGAA+TGG | - | chr7_3:76078559-76078578 | None:intergenic | 25.0% |
! | ATTTAGATGGTAACCAAAAA+TGG | - | chr7_3:76080725-76080744 | None:intergenic | 25.0% |
! | GCAAAATCCATTTAATATCT+GGG | - | chr7_3:76080848-76080867 | None:intergenic | 25.0% |
! | AGCAAAATCCATTTAATATC+TGG | - | chr7_3:76080849-76080868 | None:intergenic | 25.0% |
!!! | TTTTTTAGCACAAAGTTTTG+TGG | + | chr7_3:76080917-76080936 | Msa1124850:intron | 25.0% |
!!! | TTGTGTTGGTTAAAACATAA+TGG | + | chr7_3:76081433-76081452 | Msa1124850:intron | 25.0% |
!! | TTAGTTAGACTCTAAGAATA+TGG | + | chr7_3:76081535-76081554 | Msa1124850:intron | 25.0% |
! | CAAAGTTGAGATATTGTAAA+AGG | + | chr7_3:76081755-76081774 | Msa1124850:intron | 25.0% |
! | AAGTTGAGATATTGTAAAAG+GGG | + | chr7_3:76081757-76081776 | Msa1124850:intron | 25.0% |
! | CATCATTGTCAATTTAACTA+TGG | - | chr7_3:76082101-76082120 | None:intergenic | 25.0% |
! | TCTTACTACATAACAAACAA+TGG | + | chr7_3:76082138-76082157 | Msa1124850:intron | 25.0% |
! | GTTATTTAGGTAGAAAGAAA+AGG | - | chr7_3:76082371-76082390 | None:intergenic | 25.0% |
!!! | TTCTACGTACTTTGTTATTT+AGG | - | chr7_3:76082384-76082403 | None:intergenic | 25.0% |
! | ACCCAATTAAAAAAATTAGC+GGG | - | chr7_3:76082547-76082566 | None:intergenic | 25.0% |
! | CACCCAATTAAAAAAATTAG+CGG | - | chr7_3:76082548-76082567 | None:intergenic | 25.0% |
! | TACTCATCCATAATTATTTG+GGG | + | chr7_3:76082778-76082797 | Msa1124850:intron | 25.0% |
! | AGTATAATTCAATATAGACC+GGG | + | chr7_3:76082830-76082849 | Msa1124850:intron | 25.0% |
! | AAACTAATATCAAAAGCTCT+TGG | - | chr7_3:76077962-76077981 | None:intergenic | 25.0% |
!!! | TAAAACTTACTTTAGAACCA+TGG | - | chr7_3:76078031-76078050 | None:intergenic | 25.0% |
! | TTTGATTGAATGTGAAATTG+TGG | + | chr7_3:76083123-76083142 | Msa1124850:intron | 25.0% |
! | AAATCAACCAAAAATGTGAT+GGG | - | chr7_3:76083279-76083298 | None:intergenic | 25.0% |
! | TAAATCAACCAAAAATGTGA+TGG | - | chr7_3:76083280-76083299 | None:intergenic | 25.0% |
!!! | TGTGTAACTTTTAAGAATGT+TGG | + | chr7_3:76083451-76083470 | Msa1124850:intron | 25.0% |
!! | AATTACTAACTTTTCCACAA+GGG | - | chr7_3:76083556-76083575 | None:intergenic | 25.0% |
! | ACAGTAAGTAGTAAAATTAC+TGG | - | chr7_3:76080182-76080201 | None:intergenic | 25.0% |
!! | TTCATTGAGAACTCTTTTTA+TGG | + | chr7_3:76084398-76084417 | Msa1124850:intron | 25.0% |
! | AAAACAGTGATGAAATTACA+TGG | - | chr7_3:76084462-76084481 | None:intergenic | 25.0% |
!!! | GTAATTTCATCACTGTTTTT+TGG | + | chr7_3:76084463-76084482 | Msa1124850:intron | 25.0% |
!! | CTATATACCCGTTTTTGTAT+TGG | - | chr7_3:76077923-76077942 | None:intergenic | 30.0% |
TACAAAAACGGGTATATAGA+CGG | + | chr7_3:76077924-76077943 | Msa1124850:intron | 30.0% | |
CAGTGTTCTATGATTATTGT+AGG | + | chr7_3:76078214-76078233 | Msa1124850:intron | 30.0% | |
TCAAGTACCCATTATAACTT+TGG | + | chr7_3:76078328-76078347 | Msa1124850:intron | 30.0% | |
!! | TGCGTAACTTTTAAGAATGT+TGG | + | chr7_3:76078512-76078531 | Msa1124850:intron | 30.0% |
ATTTATTCGTAGTGATTCTC+AGG | + | chr7_3:76078709-76078728 | Msa1124850:CDS | 30.0% | |
GAGATAAAAATGACTCATGT+TGG | + | chr7_3:76078733-76078752 | Msa1124850:intron | 30.0% | |
!!! | AAATGACTCATGTTGGTTTT+TGG | + | chr7_3:76078740-76078759 | Msa1124850:intron | 30.0% |
!! | CTATATACCCGTTTTTGTAT+TGG | - | chr7_3:76077923-76077942 | None:intergenic | 30.0% |
TACAAAAACGGGTATATAGA+CGG | + | chr7_3:76077924-76077943 | Msa1124850:intron | 30.0% | |
CAGTGTTCTATGATTATTGT+AGG | + | chr7_3:76078214-76078233 | Msa1124850:intron | 30.0% | |
TCAAGTACCCATTATAACTT+TGG | + | chr7_3:76078328-76078347 | Msa1124850:intron | 30.0% | |
!! | TGCGTAACTTTTAAGAATGT+TGG | + | chr7_3:76078512-76078531 | Msa1124850:intron | 30.0% |
ATTTATTCGTAGTGATTCTC+AGG | + | chr7_3:76078709-76078728 | Msa1124850:CDS | 30.0% | |
GAGATAAAAATGACTCATGT+TGG | + | chr7_3:76078733-76078752 | Msa1124850:intron | 30.0% | |
!!! | AAATGACTCATGTTGGTTTT+TGG | + | chr7_3:76078740-76078759 | Msa1124850:intron | 30.0% |
!!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7_3:76079916-76079935 | None:intergenic | 30.0% |
TTGTGAACTCAAAATGTAAG+AGG | + | chr7_3:76079918-76079937 | Msa1124850:CDS | 30.0% | |
AATGTAACTAAGTTCATGGA+TGG | - | chr7_3:76080109-76080128 | None:intergenic | 30.0% | |
CAACAATGTAACTAAGTTCA+TGG | - | chr7_3:76080113-76080132 | None:intergenic | 30.0% | |
TGAACTTAGTTACATTGTTG+TGG | + | chr7_3:76080113-76080132 | Msa1124850:intron | 30.0% | |
CAAGGCTATCTAATAGAATT+AGG | - | chr7_3:76080158-76080177 | None:intergenic | 30.0% | |
AAAGAGTCGGCATAATAAAA+AGG | - | chr7_3:76080398-76080417 | None:intergenic | 30.0% | |
! | GCGTTAAGTTTTTCCATTTT+TGG | + | chr7_3:76080709-76080728 | Msa1124850:intron | 30.0% |
AAAAAGACCTAACATAGCAA+GGG | - | chr7_3:76080902-76080921 | None:intergenic | 30.0% | |
AAAAAAGACCTAACATAGCA+AGG | - | chr7_3:76080903-76080922 | None:intergenic | 30.0% | |
CTTCAAAACTTAACAACTGA+TGG | + | chr7_3:76081076-76081095 | Msa1124850:intron | 30.0% | |
AAGATTGAAAATATGTGCGA+CGG | + | chr7_3:76081335-76081354 | Msa1124850:intron | 30.0% | |
AAAAGCTCAATGTACCTTAA+AGG | - | chr7_3:76081415-76081434 | None:intergenic | 30.0% | |
AGTTGAGATATTGTAAAAGG+GGG | + | chr7_3:76081758-76081777 | Msa1124850:intron | 30.0% | |
ATTGGTTAACCAACCAAAAT+TGG | + | chr7_3:76081842-76081861 | Msa1124850:intron | 30.0% | |
!! | AAAAGCTTACCAATTTTGGT+TGG | - | chr7_3:76081854-76081873 | None:intergenic | 30.0% |
GCAACTTCTTGAAAGTTAAT+AGG | + | chr7_3:76082012-76082031 | Msa1124850:intron | 30.0% | |
CCAATTAAAAAAATTAGCGG+GGG | - | chr7_3:76082545-76082564 | None:intergenic | 30.0% | |
CCCAATTAAAAAAATTAGCG+GGG | - | chr7_3:76082546-76082565 | None:intergenic | 30.0% | |
!!! | CCCCGCTAATTTTTTTAATT+GGG | + | chr7_3:76082543-76082562 | Msa1124850:intron | 30.0% |
ACTCATCCATAATTATTTGG+GGG | + | chr7_3:76082779-76082798 | Msa1124850:intron | 30.0% | |
ATAGACCGGGTTATTTAAAA+TGG | + | chr7_3:76082843-76082862 | Msa1124850:intron | 30.0% | |
! | TAGACCGGGTTATTTAAAAT+GGG | + | chr7_3:76082844-76082863 | Msa1124850:intron | 30.0% |
CAAAATGCAATAACAGTGAA+TGG | - | chr7_3:76083498-76083517 | None:intergenic | 30.0% | |
!!! | TTGCATTTTGATTGAACTAG+TGG | + | chr7_3:76083508-76083527 | Msa1124850:intron | 30.0% |
!!! | TGCATTTTGATTGAACTAGT+GGG | + | chr7_3:76083509-76083528 | Msa1124850:intron | 30.0% |
! | CAATTACTAACTTTTCCACA+AGG | - | chr7_3:76083557-76083576 | None:intergenic | 30.0% |
ATTTATTCGTAGTGATTCTC+AGG | + | chr7_3:76078709-76078728 | Msa1124850:CDS | 30.0% | |
GAGATAAAAATGACTCATGT+TGG | + | chr7_3:76078733-76078752 | Msa1124850:intron | 30.0% | |
! | AAATGACTCATGTTGGATTT+TGG | + | chr7_3:76083677-76083696 | Msa1124850:intron | 30.0% |
!!! | TACATTTTGAGTTCACAAAG+AGG | - | chr7_3:76079916-76079935 | None:intergenic | 30.0% |
TTGTGAACTCAAAATGTAAG+AGG | + | chr7_3:76079918-76079937 | Msa1124850:CDS | 30.0% | |
CATGTTCAGAAGCTTAATTT+AGG | - | chr7_3:76080072-76080091 | None:intergenic | 30.0% | |
AGTAGTAAAATTACTGGACA+AGG | - | chr7_3:76084078-76084097 | None:intergenic | 30.0% | |
AATTGTGTAACAGGAAAAAC+AGG | - | chr7_3:76084506-76084525 | None:intergenic | 30.0% | |
GTCATCAATAATTGTGTAAC+AGG | - | chr7_3:76084515-76084534 | None:intergenic | 30.0% | |
! | GCGTTAAGTTTTTCCATTTT+TGG | + | chr7_3:76080709-76080728 | Msa1124850:intron | 30.0% |
! | ATAGACCGGGTTATTTCAAA+TGG | + | chr7_3:76077895-76077914 | Msa1124850:CDS | 35.0% |
! | TAGACCGGGTTATTTCAAAT+GGG | + | chr7_3:76077896-76077915 | Msa1124850:CDS | 35.0% |
AAATGGGCCCAATACAAAAA+CGG | + | chr7_3:76077912-76077931 | Msa1124850:CDS | 35.0% | |
TTACTAACGTTTCCACACAA+GGG | - | chr7_3:76078617-76078636 | None:intergenic | 35.0% | |
ATTACTAACGTTTCCACACA+AGG | - | chr7_3:76078618-76078637 | None:intergenic | 35.0% | |
TTCCTCTTTGTGAACTCAAA+AGG | + | chr7_3:76078872-76078891 | Msa1124850:CDS | 35.0% | |
!!! | TACCTTTTGAGTTCACAAAG+AGG | - | chr7_3:76078877-76078896 | None:intergenic | 35.0% |
! | ATAGACCGGGTTATTTCAAA+TGG | + | chr7_3:76077895-76077914 | Msa1124850:CDS | 35.0% |
! | TAGACCGGGTTATTTCAAAT+GGG | + | chr7_3:76077896-76077915 | Msa1124850:CDS | 35.0% |
AAATGGGCCCAATACAAAAA+CGG | + | chr7_3:76077912-76077931 | Msa1124850:CDS | 35.0% | |
TTACTAACGTTTCCACACAA+GGG | - | chr7_3:76078617-76078636 | None:intergenic | 35.0% | |
ATTACTAACGTTTCCACACA+AGG | - | chr7_3:76078618-76078637 | None:intergenic | 35.0% | |
ATATTATGCATCTGTTGTGC+AGG | + | chr7_3:76080216-76080235 | Msa1124850:intron | 35.0% | |
AAAAAGAGGTCTCAAAGAGT+CGG | - | chr7_3:76080411-76080430 | None:intergenic | 35.0% | |
GAGAGAACCCAGATATTAAA+TGG | + | chr7_3:76080838-76080857 | Msa1124850:intron | 35.0% | |
ATTTGCCAAACATTGTAACC+AGG | - | chr7_3:76080983-76081002 | None:intergenic | 35.0% | |
AGATTGAAAATATGTGCGAC+GGG | + | chr7_3:76081336-76081355 | Msa1124850:intron | 35.0% | |
! | GTTAGACTCTAAGAATATGG+CGG | + | chr7_3:76081538-76081557 | Msa1124850:intron | 35.0% |
AAACATGACATCACTGAGTT+TGG | + | chr7_3:76081578-76081597 | Msa1124850:intron | 35.0% | |
TATGGAATCTCACTTCTCTA+CGG | - | chr7_3:76082083-76082102 | None:intergenic | 35.0% | |
!!! | CCCCCGCTAATTTTTTTAAT+TGG | + | chr7_3:76082542-76082561 | Msa1124850:intron | 35.0% |
CTCATCCATAATTATTTGGG+GGG | + | chr7_3:76082780-76082799 | Msa1124850:intron | 35.0% | |
! | TTTCTCTATTTTGTTGCCGT+AGG | + | chr7_3:76078109-76078128 | Msa1124850:intron | 35.0% |
! | TTCTCTATTTTGTTGCCGTA+GGG | + | chr7_3:76078110-76078129 | Msa1124850:intron | 35.0% |
GATTCATCAACTAAACCCTA+CGG | - | chr7_3:76083076-76083095 | None:intergenic | 35.0% | |
TATCCTCTGTGATTGTTGTA+AGG | + | chr7_3:76083153-76083172 | Msa1124850:intron | 35.0% | |
AAACCTTACAACAATCACAG+AGG | - | chr7_3:76083159-76083178 | None:intergenic | 35.0% | |
! | TCAAGTACCCATCACATTTT+TGG | + | chr7_3:76083269-76083288 | Msa1124850:intron | 35.0% |
!!! | TAGTGAGTGGCTTTTGAAAT+CGG | + | chr7_3:76083382-76083401 | Msa1124850:intron | 35.0% |
AATGTAACTAGGTTCATGGA+TGG | - | chr7_3:76084011-76084030 | None:intergenic | 35.0% | |
CAACAATGTAACTAGGTTCA+TGG | - | chr7_3:76084015-76084034 | None:intergenic | 35.0% | |
TGAACCTAGTTACATTGTTG+TGG | + | chr7_3:76084015-76084034 | Msa1124850:intron | 35.0% | |
GTAACCACAACAATGTAACT+AGG | - | chr7_3:76080120-76080139 | None:intergenic | 35.0% | |
CAAGGCTATCTGATAGAATT+AGG | - | chr7_3:76084060-76084079 | None:intergenic | 35.0% | |
!! | CTTTCTATTATGCTGACTCT+GGG | + | chr7_3:76084298-76084317 | Msa1124850:intron | 35.0% |
! | AAGTTTTACTGGTCAGTACT+TGG | + | chr7_3:76084939-76084958 | Msa1124850:three_prime_UTR | 35.0% |
! | TTGAAAGAACCAGGATTAGT+AGG | - | chr7_3:76085045-76085064 | None:intergenic | 35.0% |
ATTCTGAACTTGAAAGAACC+AGG | - | chr7_3:76085054-76085073 | None:intergenic | 35.0% | |
AATGGGCCCAATACAAAAAC+GGG | + | chr7_3:76077913-76077932 | Msa1124850:CDS | 40.0% | |
!! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7_3:76078649-76078668 | None:intergenic | 40.0% |
CAAAGATTTACCCAGGAAGA+GGG | + | chr7_3:76078681-76078700 | Msa1124850:CDS | 40.0% | |
TAAATCTGATCCCTCTTCCT+GGG | - | chr7_3:76078694-76078713 | None:intergenic | 40.0% | |
ATAAATCTGATCCCTCTTCC+TGG | - | chr7_3:76078695-76078714 | None:intergenic | 40.0% | |
GTGAACTCAAAAGGTAAGAG+AGG | + | chr7_3:76078881-76078900 | Msa1124850:intron | 40.0% | |
AATGGGCCCAATACAAAAAC+GGG | + | chr7_3:76077913-76077932 | Msa1124850:CDS | 40.0% | |
!! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7_3:76078649-76078668 | None:intergenic | 40.0% |
CAAAGATTTACCCAGGAAGA+GGG | + | chr7_3:76078681-76078700 | Msa1124850:CDS | 40.0% | |
TAAATCTGATCCCTCTTCCT+GGG | - | chr7_3:76078694-76078713 | None:intergenic | 40.0% | |
ATAAATCTGATCCCTCTTCC+TGG | - | chr7_3:76078695-76078714 | None:intergenic | 40.0% | |
!! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7_3:76079949-76079968 | None:intergenic | 40.0% |
TTCAAGTGTAGCACCAACAA+TGG | - | chr7_3:76080302-76080321 | None:intergenic | 40.0% | |
GGAGAGGATAAAGAAAACCA+AGG | + | chr7_3:76080571-76080590 | Msa1124850:CDS | 40.0% | |
! | TTGTGCCTTAGATGCTACTT+CGG | - | chr7_3:76080618-76080637 | None:intergenic | 40.0% |
! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7_3:76080624-76080643 | Msa1124850:CDS | 40.0% |
CTAACATAGCAAGGGATCAT+TGG | - | chr7_3:76080894-76080913 | None:intergenic | 40.0% | |
! | CAATGATCCCTTGCTATGTT+AGG | + | chr7_3:76080892-76080911 | Msa1124850:intron | 40.0% |
CTGATCCTGGTTACAATGTT+TGG | + | chr7_3:76080975-76080994 | Msa1124850:intron | 40.0% | |
! | GGTACATTGAGCTTTTGTGT+TGG | + | chr7_3:76081419-76081438 | Msa1124850:intron | 40.0% |
AAGAGGCCAAGACACAAATA+GGG | - | chr7_3:76081464-76081483 | None:intergenic | 40.0% | |
AAAGAGGCCAAGACACAAAT+AGG | - | chr7_3:76081465-76081484 | None:intergenic | 40.0% | |
AATCGAGAGCTGGAAAAAAG+AGG | - | chr7_3:76081481-76081500 | None:intergenic | 40.0% | |
!!! | TCTTTTTTCCAGCTCTCGAT+TGG | + | chr7_3:76081480-76081499 | Msa1124850:intron | 40.0% |
! | AGCAAATTGAGTTGTCACCT+AGG | + | chr7_3:76081720-76081739 | Msa1124850:intron | 40.0% |
! | AAATTGAGTTGTCACCTAGG+TGG | + | chr7_3:76081723-76081742 | Msa1124850:intron | 40.0% |
CTTTGACTAAATCACCACCT+AGG | - | chr7_3:76081740-76081759 | None:intergenic | 40.0% | |
TCTCACCCCCCAAATAATTA+TGG | - | chr7_3:76082788-76082807 | None:intergenic | 40.0% | |
TTGAATTTATTGCGCCCTTG+TGG | + | chr7_3:76078600-76078619 | Msa1124850:intron | 40.0% | |
!! | GACAGAGTTCAGTTCTGAAA+TGG | - | chr7_3:76078649-76078668 | None:intergenic | 40.0% |
TCAAAGATTTACCCAGGAAG+AGG | + | chr7_3:76083617-76083636 | Msa1124850:CDS | 40.0% | |
CAAAGATTTACCCAGGAAGA+GGG | + | chr7_3:76078681-76078700 | Msa1124850:CDS | 40.0% | |
TAAATCTGATCCCTCTTCCT+GGG | - | chr7_3:76078694-76078713 | None:intergenic | 40.0% | |
ATAAATCTGATCCCTCTTCC+TGG | - | chr7_3:76078695-76078714 | None:intergenic | 40.0% | |
!! | TTGAAGGCTTCAACTTGTTG+TGG | - | chr7_3:76079949-76079968 | None:intergenic | 40.0% |
ATATTATGCATCTGTCGTGC+AGG | + | chr7_3:76084118-76084137 | Msa1124850:intron | 40.0% | |
TTCAAGTGTAGCACCAACAA+TGG | - | chr7_3:76080302-76080321 | None:intergenic | 40.0% | |
CCAGAGTCAGCATAATAGAA+AGG | - | chr7_3:76084300-76084319 | None:intergenic | 40.0% | |
!! | CCTTTCTATTATGCTGACTC+TGG | + | chr7_3:76084297-76084316 | Msa1124850:intron | 40.0% |
ATTTCACTGCAGGATTGACT+CGG | - | chr7_3:76084550-76084569 | None:intergenic | 40.0% | |
TCAATCCTGCAGTGAAATCA+AGG | + | chr7_3:76084552-76084571 | Msa1124850:intron | 40.0% | |
GGAGAGGATAAAGAAAACCA+AGG | + | chr7_3:76080571-76080590 | Msa1124850:CDS | 40.0% | |
!! | CTTGGCTTTCTTTTCATCCT+TGG | - | chr7_3:76084593-76084612 | None:intergenic | 40.0% |
! | CATCTAAGGCACAAAAGTCA+GGG | + | chr7_3:76080624-76080643 | Msa1124850:CDS | 40.0% |
TTCAGCTTTCCTACTAATCC+TGG | + | chr7_3:76085033-76085052 | Msa1124850:three_prime_UTR | 40.0% | |
! | TGGGCCCATTTGAAATAACC+CGG | - | chr7_3:76077903-76077922 | None:intergenic | 45.0% |
GAATTTATTGCGCCCTTGTG+TGG | + | chr7_3:76078602-76078621 | Msa1124850:intron | 45.0% | |
!! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7_3:76078656-76078675 | Msa1124850:CDS | 45.0% |
GCAAAGATTTACCCAGGAAG+AGG | + | chr7_3:76078680-76078699 | Msa1124850:CDS | 45.0% | |
! | TGGGCCCATTTGAAATAACC+CGG | - | chr7_3:76077903-76077922 | None:intergenic | 45.0% |
GAATTTATTGCGCCCTTGTG+TGG | + | chr7_3:76078602-76078621 | Msa1124850:intron | 45.0% | |
!! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7_3:76078656-76078675 | Msa1124850:CDS | 45.0% |
GCAAAGATTTACCCAGGAAG+AGG | + | chr7_3:76078680-76078699 | Msa1124850:CDS | 45.0% | |
TGAAGCCTTCAAAGCTCACA+TGG | + | chr7_3:76079957-76079976 | Msa1124850:CDS | 45.0% | |
!! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7_3:76079987-76080006 | None:intergenic | 45.0% |
GTACAGAAAGCAGCACAAGA+AGG | + | chr7_3:76079988-76080007 | Msa1124850:CDS | 45.0% | |
ATTTCACTGCGGGATTGACT+CGG | - | chr7_3:76080548-76080567 | None:intergenic | 45.0% | |
TCAATCCCGCAGTGAAATCA+AGG | + | chr7_3:76080550-76080569 | Msa1124850:intron | 45.0% | |
TCCTCTCCTTGATTTCACTG+CGG | - | chr7_3:76080559-76080578 | None:intergenic | 45.0% | |
! | CTTGGCTTTCTTCTCATCCT+TGG | - | chr7_3:76080591-76080610 | None:intergenic | 45.0% |
! | AGATGCTACTTCGGCTTTCT+TGG | - | chr7_3:76080609-76080628 | None:intergenic | 45.0% |
GAAAGCCGAAGTAGCATCTA+AGG | + | chr7_3:76080610-76080629 | Msa1124850:CDS | 45.0% | |
! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7_3:76080623-76080642 | Msa1124850:CDS | 45.0% |
AAGGCACAAAAGTCAGGGAA+AGG | + | chr7_3:76080629-76080648 | Msa1124850:CDS | 45.0% | |
AGGGAAAGGCAATGTTCAGA+AGG | + | chr7_3:76080643-76080662 | Msa1124850:CDS | 45.0% | |
GGGAAAGGCAATGTTCAGAA+GGG | + | chr7_3:76080644-76080663 | Msa1124850:CDS | 45.0% | |
TATGCCCAAGGGTCCTAAAA+TGG | + | chr7_3:76080670-76080689 | Msa1124850:CDS | 45.0% | |
ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7_3:76080671-76080690 | Msa1124850:CDS | 45.0% | |
GCAGTTCAAGCTAGGACTTT+AGG | - | chr7_3:76080943-76080962 | None:intergenic | 45.0% | |
AAGTCCTAGCTTGAACTGCT+TGG | + | chr7_3:76080944-76080963 | Msa1124850:intron | 45.0% | |
ATGTTCCCTATTCCCTACCA+TGG | + | chr7_3:76081003-76081022 | Msa1124850:intron | 45.0% | |
ATGATTTACAGCTGCCTCCA+TGG | - | chr7_3:76081023-76081042 | None:intergenic | 45.0% | |
!! | AAATATGTGCGACGGGTTAG+AGG | + | chr7_3:76081343-76081362 | Msa1124850:intron | 45.0% |
GTTCTCCCCTATTTGTGTCT+TGG | + | chr7_3:76081455-76081474 | Msa1124850:intron | 45.0% | |
AGAGGCCAAGACACAAATAG+GGG | - | chr7_3:76081463-76081482 | None:intergenic | 45.0% | |
AGAATGTTAACCAGAGCCTC+CGG | + | chr7_3:76081816-76081835 | Msa1124850:intron | 45.0% | |
ATTGCTTAACTAGTGTCCCG+AGG | + | chr7_3:76081948-76081967 | Msa1124850:intron | 45.0% | |
TTGCTTAACTAGTGTCCCGA+GGG | + | chr7_3:76081949-76081968 | Msa1124850:intron | 45.0% | |
CTCTACGGTGATATGCATCA+AGG | - | chr7_3:76082068-76082087 | None:intergenic | 45.0% | |
ACAGTGATGAGCTGAGATGT+TGG | - | chr7_3:76082277-76082296 | None:intergenic | 45.0% | |
TGTTTCAGAGAGAGAGAGAG+AGG | - | chr7_3:76082317-76082336 | None:intergenic | 45.0% | |
!! | TCTCTCTCTCTGAAACAACG+TGG | + | chr7_3:76082320-76082339 | Msa1124850:intron | 45.0% |
AATTATTTGGGGGGTGAGAG+AGG | + | chr7_3:76082789-76082808 | Msa1124850:intron | 45.0% | |
GGGTGAGAGAGGTAAGTATA+GGG | + | chr7_3:76082800-76082819 | Msa1124850:intron | 45.0% | |
! | CGGGCCCATTTTAAATAACC+CGG | - | chr7_3:76082851-76082870 | None:intergenic | 45.0% |
AAATGGGCCCGATACGAAAA+CGG | + | chr7_3:76082860-76082879 | Msa1124850:intron | 45.0% | |
!! | ACTGAACTCTGTCGATTCAG+TGG | + | chr7_3:76078656-76078675 | Msa1124850:CDS | 45.0% |
AGTGGCTCAAAGATTTACCC+AGG | + | chr7_3:76083611-76083630 | Msa1124850:CDS | 45.0% | |
TGAAGCCTTCAAAGCTCACA+TGG | + | chr7_3:76079957-76079976 | Msa1124850:CDS | 45.0% | |
!! | CTTGTGCTGCTTTCTGTACA+TGG | - | chr7_3:76079987-76080006 | None:intergenic | 45.0% |
GTACAGAAAGCAGCACAAGA+AGG | + | chr7_3:76079988-76080007 | Msa1124850:CDS | 45.0% | |
CTCAAGAAGCGGTGAAGAAA+AGG | + | chr7_3:76084147-76084166 | Msa1124850:CDS | 45.0% | |
AAAGAAAGCCAAGAAAGCCG+AGG | + | chr7_3:76084600-76084619 | Msa1124850:CDS | 45.0% | |
TTGTGCCTTAGATGCTACCT+CGG | - | chr7_3:76084620-76084639 | None:intergenic | 45.0% | |
! | GCATCTAAGGCACAAAAGTC+AGG | + | chr7_3:76080623-76080642 | Msa1124850:CDS | 45.0% |
TAAGGCACAAAAGTCAGGGA+AGG | + | chr7_3:76080628-76080647 | Msa1124850:CDS | 45.0% | |
AAGGCACAAAAGTCAGGGAA+GGG | + | chr7_3:76080629-76080648 | Msa1124850:CDS | 45.0% | |
AGGGAAGGGAAATGTTCAGA+AGG | + | chr7_3:76084645-76084664 | Msa1124850:CDS | 45.0% | |
GGGAAGGGAAATGTTCAGAA+GGG | + | chr7_3:76084646-76084665 | Msa1124850:CDS | 45.0% | |
TATGCCCAAGGGTCCTAAAA+TGG | + | chr7_3:76080670-76080689 | Msa1124850:CDS | 45.0% | |
ATGCCCAAGGGTCCTAAAAT+GGG | + | chr7_3:76080671-76080690 | Msa1124850:CDS | 45.0% | |
GTCAGTACTTGGCACTTGTT+CGG | + | chr7_3:76084950-76084969 | Msa1124850:three_prime_UTR | 45.0% | |
AGTGGCGCAAAGATTTACCC+AGG | + | chr7_3:76078674-76078693 | Msa1124850:CDS | 50.0% | |
AGTGGCGCAAAGATTTACCC+AGG | + | chr7_3:76078674-76078693 | Msa1124850:CDS | 50.0% | |
! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7_3:76079965-76079984 | None:intergenic | 50.0% |
GCAGGACATTGCTCAAGAAG+CGG | + | chr7_3:76080234-76080253 | Msa1124850:intron | 50.0% | |
CTCAAGAAGCGGTGAAGAAG+AGG | + | chr7_3:76080245-76080264 | Msa1124850:CDS | 50.0% | |
! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7_3:76080273-76080292 | None:intergenic | 50.0% |
CCAACAATGGACCTGGAGTA+TGG | - | chr7_3:76080289-76080308 | None:intergenic | 50.0% | |
CCATACTCCAGGTCCATTGT+TGG | + | chr7_3:76080286-76080305 | Msa1124850:CDS | 50.0% | |
TGTAGCACCAACAATGGACC+TGG | - | chr7_3:76080296-76080315 | None:intergenic | 50.0% | |
CCTCTCCTTGATTTCACTGC+GGG | - | chr7_3:76080558-76080577 | None:intergenic | 50.0% | |
AGTGCCAAGCAGTTCAAGCT+AGG | - | chr7_3:76080951-76080970 | None:intergenic | 50.0% | |
TTCCCTATTCCCTACCATGG+AGG | + | chr7_3:76081006-76081025 | Msa1124850:intron | 50.0% | |
TGCCTCCATGGTAGGGAATA+GGG | - | chr7_3:76081011-76081030 | None:intergenic | 50.0% | |
TTACAGCTGCCTCCATGGTA+GGG | - | chr7_3:76081018-76081037 | None:intergenic | 50.0% | |
TTTACAGCTGCCTCCATGGT+AGG | - | chr7_3:76081019-76081038 | None:intergenic | 50.0% | |
!! | GGTTAGAGGTGATGATGGTC+TGG | + | chr7_3:76081357-76081376 | Msa1124850:intron | 50.0% |
TCACGTATCCAATCGAGAGC+TGG | - | chr7_3:76081491-76081510 | None:intergenic | 50.0% | |
GAATGTTAACCAGAGCCTCC+GGG | + | chr7_3:76081817-76081836 | Msa1124850:intron | 50.0% | |
AATGTTAACCAGAGCCTCCG+GGG | + | chr7_3:76081818-76081837 | Msa1124850:intron | 50.0% | |
! | TGGTTGGTTAACCAATGCCC+CGG | - | chr7_3:76081838-76081857 | None:intergenic | 50.0% |
TCTTGTTAACCAGTGCCCTC+GGG | - | chr7_3:76081967-76081986 | None:intergenic | 50.0% | |
! | GTCTTGTTAACCAGTGCCCT+CGG | - | chr7_3:76081968-76081987 | None:intergenic | 50.0% |
AGAGAGAGAGGAGAGGATTC+AGG | - | chr7_3:76082305-76082324 | None:intergenic | 50.0% | |
ATGAGCATTCGTCCCTCCTT+TGG | - | chr7_3:76082487-76082506 | None:intergenic | 50.0% | |
GGGGTGAGAGAGGTAAGTAT+AGG | + | chr7_3:76082799-76082818 | Msa1124850:intron | 50.0% | |
AATGGGCCCGATACGAAAAC+GGG | + | chr7_3:76082861-76082880 | Msa1124850:intron | 50.0% | |
! | GCAGTCCATGTGAGCTTTGA+AGG | - | chr7_3:76079965-76079984 | None:intergenic | 50.0% |
GCAGGACATTGCTCAAGAAG+CGG | + | chr7_3:76080234-76080253 | Msa1124850:intron | 50.0% | |
! | AGTATGGCTTCTTGGTGGCA+CGG | - | chr7_3:76080273-76080292 | None:intergenic | 50.0% |
CCAACAATGGACCTGGAGTA+TGG | - | chr7_3:76080289-76080308 | None:intergenic | 50.0% | |
CCATACTCCAGGTCCATTGT+TGG | + | chr7_3:76080286-76080305 | Msa1124850:CDS | 50.0% | |
TGTAGCACCAACAATGGACC+TGG | - | chr7_3:76080296-76080315 | None:intergenic | 50.0% | |
CCTCTCCTTGATTTCACTGC+AGG | - | chr7_3:76080558-76080577 | None:intergenic | 50.0% | |
CCTGCAGTGAAATCAAGGAG+AGG | + | chr7_3:76084557-76084576 | Msa1124850:intron | 50.0% | |
AGATGCTACCTCGGCTTTCT+TGG | - | chr7_3:76084611-76084630 | None:intergenic | 50.0% | |
GAAAGCCGAGGTAGCATCTA+AGG | + | chr7_3:76084612-76084631 | Msa1124850:CDS | 50.0% | |
TGGCTGCTTCGTTGATGTGG+TGG | - | chr7_3:76078011-76078030 | None:intergenic | 55.0% | |
CCATGGCTGCTTCGTTGATG+TGG | - | chr7_3:76078014-76078033 | None:intergenic | 55.0% | |
CCACATCAACGAAGCAGCCA+TGG | + | chr7_3:76078011-76078030 | Msa1124850:CDS | 55.0% | |
TGGCTGCTTCGTTGATGTGG+TGG | - | chr7_3:76078011-76078030 | None:intergenic | 55.0% | |
CCATGGCTGCTTCGTTGATG+TGG | - | chr7_3:76078014-76078033 | None:intergenic | 55.0% | |
CCACATCAACGAAGCAGCCA+TGG | + | chr7_3:76078011-76078030 | Msa1124850:CDS | 55.0% | |
CCTGGAGTATGGCTTCTTGG+TGG | - | chr7_3:76080278-76080297 | None:intergenic | 55.0% | |
CCACCAAGAAGCCATACTCC+AGG | + | chr7_3:76080275-76080294 | Msa1124850:CDS | 55.0% | |
GGACCTGGAGTATGGCTTCT+TGG | - | chr7_3:76080281-76080300 | None:intergenic | 55.0% | |
GAAAAGAACCGAGAAGCCCG+AGG | + | chr7_3:76080333-76080352 | Msa1124850:CDS | 55.0% | |
ATCTCGAACCTCGGGCTTCT+CGG | - | chr7_3:76080344-76080363 | None:intergenic | 55.0% | |
CTAGCAGCATCTCGAACCTC+GGG | - | chr7_3:76080352-76080371 | None:intergenic | 55.0% | |
CCTAGCAGCATCTCGAACCT+CGG | - | chr7_3:76080353-76080372 | None:intergenic | 55.0% | |
CGAGGTTCGAGATGCTGCTA+GGG | + | chr7_3:76080351-76080370 | Msa1124850:CDS | 55.0% | |
CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7_3:76080365-76080384 | Msa1124850:CDS | 55.0% | |
CCCGCAGTGAAATCAAGGAG+AGG | + | chr7_3:76080555-76080574 | Msa1124850:intron | 55.0% | |
!! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7_3:76080658-76080677 | Msa1124850:CDS | 55.0% |
!! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7_3:76080659-76080678 | Msa1124850:CDS | 55.0% |
!!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7_3:76080677-76080696 | None:intergenic | 55.0% |
CCCAAGGGTCCTAAAATGGG+CGG | + | chr7_3:76080674-76080693 | Msa1124850:CDS | 55.0% | |
!!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7_3:76080678-76080697 | None:intergenic | 55.0% |
AAGGGTCCTAAAATGGGCGG+TGG | + | chr7_3:76080677-76080696 | Msa1124850:CDS | 55.0% | |
! | CTAAAATGGGCGGTGGTGGT+GGG | + | chr7_3:76080684-76080703 | Msa1124850:CDS | 55.0% |
CTTGGCACTTACGCTGATCC+TGG | + | chr7_3:76080962-76080981 | Msa1124850:intron | 55.0% | |
CTGCCTCCATGGTAGGGAAT+AGG | - | chr7_3:76081012-76081031 | None:intergenic | 55.0% | |
!! | CGACGGGTTAGAGGTGATGA+TGG | + | chr7_3:76081352-76081371 | Msa1124850:intron | 55.0% |
TTGGTTAACCAATGCCCCGG+AGG | - | chr7_3:76081835-76081854 | None:intergenic | 55.0% | |
GAGAGGAGAGGATTCAGGAC+AGG | - | chr7_3:76082300-76082319 | None:intergenic | 55.0% | |
CAGAGAGAGAGAGAGAGGAG+AGG | - | chr7_3:76082312-76082331 | None:intergenic | 55.0% | |
AAGCTCTCCCAAGCCACCAA+AGG | + | chr7_3:76082468-76082487 | Msa1124850:intron | 55.0% | |
TCTCCCAAGCCACCAAAGGA+GGG | + | chr7_3:76082472-76082491 | Msa1124850:intron | 55.0% | |
AGCATTCGTCCCTCCTTTGG+TGG | - | chr7_3:76082484-76082503 | None:intergenic | 55.0% | |
TGGCTGCTTCGTTGATGTGG+TGG | - | chr7_3:76078011-76078030 | None:intergenic | 55.0% | |
CCATGGCTGCTTCGTTGATG+TGG | - | chr7_3:76078014-76078033 | None:intergenic | 55.0% | |
CCACATCAACGAAGCAGCCA+TGG | + | chr7_3:76078011-76078030 | Msa1124850:CDS | 55.0% | |
CCTGGAGTATGGCTTCTTGG+TGG | - | chr7_3:76080278-76080297 | None:intergenic | 55.0% | |
CCACCAAGAAGCCATACTCC+AGG | + | chr7_3:76080275-76080294 | Msa1124850:CDS | 55.0% | |
GGACCTGGAGTATGGCTTCT+TGG | - | chr7_3:76080281-76080300 | None:intergenic | 55.0% | |
GAAAAGAACCGAGAAGCCCG+AGG | + | chr7_3:76080333-76080352 | Msa1124850:CDS | 55.0% | |
ATCTCGAACCTCGGGCTTCT+CGG | - | chr7_3:76080344-76080363 | None:intergenic | 55.0% | |
CTAGCAGCATCTCGAACCTC+GGG | - | chr7_3:76080352-76080371 | None:intergenic | 55.0% | |
CCTAGCAGCATCTCGAACCT+CGG | - | chr7_3:76080353-76080372 | None:intergenic | 55.0% | |
CGAGGTTCGAGATGCTGCTA+GGG | + | chr7_3:76080351-76080370 | Msa1124850:CDS | 55.0% | |
CTGCTAGGGAAGCTGCTCTT+CGG | + | chr7_3:76080365-76080384 | Msa1124850:CDS | 55.0% | |
!! | TCAGAAGGGTGCTATGCCCA+AGG | + | chr7_3:76080658-76080677 | Msa1124850:CDS | 55.0% |
!! | CAGAAGGGTGCTATGCCCAA+GGG | + | chr7_3:76080659-76080678 | Msa1124850:CDS | 55.0% |
!!! | CCGCCCATTTTAGGACCCTT+GGG | - | chr7_3:76080677-76080696 | None:intergenic | 55.0% |
CCCAAGGGTCCTAAAATGGG+CGG | + | chr7_3:76080674-76080693 | Msa1124850:CDS | 55.0% | |
!!! | ACCGCCCATTTTAGGACCCT+TGG | - | chr7_3:76080678-76080697 | None:intergenic | 55.0% |
AAGGGTCCTAAAATGGGCGG+TGG | + | chr7_3:76080677-76080696 | Msa1124850:CDS | 55.0% | |
CCGAGGTTCGAGATGCTGCT+AGG | + | chr7_3:76080350-76080369 | Msa1124850:CDS | 60.0% | |
GGTCCTAAAATGGGCGGTGG+TGG | + | chr7_3:76080680-76080699 | Msa1124850:CDS | 60.0% | |
! | CCACCACCACCGCCCATTTT+AGG | - | chr7_3:76080686-76080705 | None:intergenic | 60.0% |
! | CCTAAAATGGGCGGTGGTGG+TGG | + | chr7_3:76080683-76080702 | Msa1124850:CDS | 60.0% |
! | AACTAGTGTCCCGAGGGCAC+TGG | + | chr7_3:76081955-76081974 | Msa1124850:intron | 60.0% |
CTCTCCCAAGCCACCAAAGG+AGG | + | chr7_3:76082471-76082490 | Msa1124850:intron | 60.0% | |
! | CGTCCCTCCTTTGGTGGCTT+GGG | - | chr7_3:76082478-76082497 | None:intergenic | 60.0% |
! | TCGTCCCTCCTTTGGTGGCT+TGG | - | chr7_3:76082479-76082498 | None:intergenic | 60.0% |
CCGAGGTTCGAGATGCTGCT+AGG | + | chr7_3:76080350-76080369 | Msa1124850:CDS | 60.0% | |
GGTCCTAAAATGGGCGGTGG+TGG | + | chr7_3:76080680-76080699 | Msa1124850:CDS | 60.0% | |
! | CCTAAAATGGGCGGTGGTGG+CGG | + | chr7_3:76080683-76080702 | Msa1124850:CDS | 60.0% |
! | CTAAAATGGGCGGTGGTGGC+GGG | + | chr7_3:76084686-76084705 | Msa1124850:CDS | 60.0% |
AACCAGAGCCTCCGGGGCAT+TGG | + | chr7_3:76081824-76081843 | Msa1124850:intron | 65.0% | |
AACCAATGCCCCGGAGGCTC+TGG | - | chr7_3:76081829-76081848 | None:intergenic | 65.0% | |
! | CCGCCACCACCGCCCATTTT+AGG | - | chr7_3:76084688-76084707 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 76077889 | 76085087 | 76077889 | ID=Msa1124850;Name=Msa1124850 |
chr7_3 | mRNA | 76077889 | 76085087 | 76077889 | ID=Msa1124850-mRNA-1;Parent=Msa1124850;Name=Msa1124850-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.76|0.57|1|0.84|0.71|14|370|422 |
chr7_3 | exon | 76077889 | 76077934 | 76077889 | ID=Msa1124850-mRNA-1:exon:20645;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76077986 | 76078040 | 76077986 | ID=Msa1124850-mRNA-1:exon:20646;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76078655 | 76078730 | 76078655 | ID=Msa1124850-mRNA-1:exon:20647;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76078869 | 76078893 | 76078869 | ID=Msa1124850-mRNA-1:exon:20648;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76079026 | 76079080 | 76079026 | ID=Msa1124850-mRNA-1:exon:20649;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76079694 | 76079769 | 76079694 | ID=Msa1124850-mRNA-1:exon:20650;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76079908 | 76080009 | 76079908 | ID=Msa1124850-mRNA-1:exon:20651;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76080238 | 76080386 | 76080238 | ID=Msa1124850-mRNA-1:exon:20652;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76080562 | 76080710 | 76080562 | ID=Msa1124850-mRNA-1:exon:20653;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76082934 | 76082988 | 76082934 | ID=Msa1124850-mRNA-1:exon:20654;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76083592 | 76083667 | 76083592 | ID=Msa1124850-mRNA-1:exon:20655;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76083809 | 76083910 | 76083809 | ID=Msa1124850-mRNA-1:exon:20656;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76084140 | 76084288 | 76084140 | ID=Msa1124850-mRNA-1:exon:20657;Parent=Msa1124850-mRNA-1 |
chr7_3 | exon | 76084564 | 76085087 | 76084564 | ID=Msa1124850-mRNA-1:exon:20658;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76077889 | 76077934 | 76077889 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76077986 | 76078040 | 76077986 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76078655 | 76078730 | 76078655 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76078869 | 76078893 | 76078869 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76079026 | 76079080 | 76079026 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76079694 | 76079769 | 76079694 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76079908 | 76080009 | 76079908 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76080238 | 76080386 | 76080238 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76080562 | 76080710 | 76080562 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76082934 | 76082988 | 76082934 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76083592 | 76083667 | 76083592 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76083809 | 76083910 | 76083809 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76084140 | 76084288 | 76084140 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | CDS | 76084564 | 76084717 | 76084564 | ID=Msa1124850-mRNA-1:cds;Parent=Msa1124850-mRNA-1 |
chr7_3 | three_prime_UTR | 76084718 | 76085087 | 76084718 | ID=Msa1124850-mRNA-1:three_prime_utr;Parent=Msa1124850-mRNA-1 |
Gene Sequence |
Protein sequence |