Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050100 | XP_003623356.1 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050100 | sp|P49204|RS42_ARATH | 91.255 | 263 | 22 | 1 | 1 | 263 | 1 | 262 | 0.0 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050100 | G7KT73 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 533 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001760 | Msa1050100 | 0.821257 | 4.444146e-53 | -8.615850e-47 |
| Msa0021290 | Msa1050100 | 0.820316 | 7.317174e-53 | -8.615850e-47 |
| Msa0021320 | Msa1050100 | 0.837255 | 5.788585e-57 | -8.615850e-47 |
| Msa0032780 | Msa1050100 | 0.808329 | 3.267872e-50 | -8.615850e-47 |
| Msa0040220 | Msa1050100 | 0.879851 | 8.888961e-70 | -8.615850e-47 |
| Msa0087910 | Msa1050100 | 0.877147 | 7.936232e-69 | -8.615850e-47 |
| Msa0089540 | Msa1050100 | 0.825638 | 4.203572e-54 | -8.615850e-47 |
| Msa0114600 | Msa1050100 | 0.881717 | 1.903821e-70 | -8.615850e-47 |
| Msa0602900 | Msa1050100 | 0.838154 | 3.403967e-57 | -8.615850e-47 |
| Msa0605890 | Msa1050100 | 0.803201 | 3.902730e-49 | -8.615850e-47 |
| Msa0622230 | Msa1050100 | 0.867444 | 1.362462e-65 | -8.615850e-47 |
| Msa0643960 | Msa1050100 | 0.847231 | 1.318295e-59 | -8.615850e-47 |
| Msa0653060 | Msa1050100 | 0.837020 | 6.647459e-57 | -8.615850e-47 |
| Msa0694400 | Msa1050100 | 0.802872 | 4.564186e-49 | -8.615850e-47 |
| Msa0704860 | Msa1050100 | 0.807074 | 6.037629e-50 | -8.615850e-47 |
| Msa0708630 | Msa1050100 | 0.858237 | 9.457774e-63 | -8.615850e-47 |
| Msa0748350 | Msa1050100 | 0.871922 | 4.723107e-67 | -8.615850e-47 |
| Msa0790450 | Msa1050100 | 0.844750 | 6.231258e-59 | -8.615850e-47 |
| Msa0839570 | Msa1050100 | 0.824964 | 6.066444e-54 | -8.615850e-47 |
| Msa0132460 | Msa1050100 | 0.858138 | 1.012082e-62 | -8.615850e-47 |
| Msa0134580 | Msa1050100 | 0.892324 | 1.763629e-74 | -8.615850e-47 |
| Msa0167860 | Msa1050100 | 0.817826 | 2.696165e-52 | -8.615850e-47 |
| Msa0173250 | Msa1050100 | 0.806967 | 6.359085e-50 | -8.615850e-47 |
| Msa0182050 | Msa1050100 | 0.856204 | 3.768719e-62 | -8.615850e-47 |
| Msa0182100 | Msa1050100 | 0.820259 | 7.539449e-53 | -8.615850e-47 |
| Msa0184650 | Msa1050100 | 0.805218 | 1.484497e-49 | -8.615850e-47 |
| Msa0188740 | Msa1050100 | 0.813323 | 2.712540e-51 | -8.615850e-47 |
| Msa0191550 | Msa1050100 | 0.800400 | 1.467390e-48 | -8.615850e-47 |
| Msa0192050 | Msa1050100 | 0.830342 | 3.099972e-55 | -8.615850e-47 |
| Msa0194940 | Msa1050100 | 0.860108 | 2.598258e-63 | -8.615850e-47 |
| Msa0222730 | Msa1050100 | 0.822924 | 1.826055e-53 | -8.615850e-47 |
| Msa0223950 | Msa1050100 | 0.825366 | 4.874542e-54 | -8.615850e-47 |
| Msa0228540 | Msa1050100 | 0.809822 | 1.564940e-50 | -8.615850e-47 |
| Msa0371490 | Msa1050100 | 0.827876 | 1.227852e-54 | -8.615850e-47 |
| Msa0382950 | Msa1050100 | 0.805574 | 1.250182e-49 | -8.615850e-47 |
| Msa0388250 | Msa1050100 | 0.841104 | 5.816923e-58 | -8.615850e-47 |
| Msa0416210 | Msa1050100 | 0.802128 | 6.497188e-49 | -8.615850e-47 |
| Msa0419710 | Msa1050100 | 0.809695 | 1.666199e-50 | -8.615850e-47 |
| Msa0426090 | Msa1050100 | 0.839557 | 1.475278e-57 | -8.615850e-47 |
| Msa0426250 | Msa1050100 | 0.859787 | 3.247723e-63 | -8.615850e-47 |
| Msa0432750 | Msa1050100 | 0.822067 | 2.888230e-53 | -8.615850e-47 |
| Msa0433060 | Msa1050100 | 0.806102 | 9.683526e-50 | -8.615850e-47 |
| Msa0450150 | Msa1050100 | 0.822342 | 2.493259e-53 | -8.615850e-47 |
| Msa0472480 | Msa1050100 | 0.831890 | 1.291214e-55 | -8.615850e-47 |
| Msa0475810 | Msa1050100 | 0.868002 | 9.020955e-66 | -8.615850e-47 |
| Msa0479980 | Msa1050100 | 0.820110 | 8.154494e-53 | -8.615850e-47 |
| Msa0481520 | Msa1050100 | 0.813774 | 2.158540e-51 | -8.615850e-47 |
| Msa1004780 | Msa1050100 | 0.818400 | 1.999643e-52 | -8.615850e-47 |
| Msa1025200 | Msa1050100 | 0.872072 | 4.211632e-67 | -8.615850e-47 |
| Msa1025220 | Msa1050100 | 0.850284 | 1.875145e-60 | -8.615850e-47 |
| Msa1040160 | Msa1050100 | 0.812235 | 4.694422e-51 | -8.615850e-47 |
| Msa1047020 | Msa1050100 | 0.801008 | 1.102841e-48 | -8.615850e-47 |
| Msa1050100 | Msa1083370 | 0.829936 | 3.895202e-55 | -8.615850e-47 |
| Msa1050100 | Msa1085570 | -0.803727 | 3.036231e-49 | -8.615850e-47 |
| Msa1050100 | Msa1085850 | 0.824545 | 7.615473e-54 | -8.615850e-47 |
| Msa1050100 | Msa1109310 | 0.834624 | 2.690938e-56 | -8.615850e-47 |
| Msa1050100 | Msa1124850 | 0.809048 | 2.293691e-50 | -8.615850e-47 |
| Msa1050100 | Msa1126690 | 0.827695 | 1.357079e-54 | -8.615850e-47 |
| Msa1050100 | Msa1144610 | 0.809541 | 1.798411e-50 | -8.615850e-47 |
| Msa1050100 | Msa1165640 | 0.863261 | 2.824563e-64 | -8.615850e-47 |
| Msa1050100 | Msa1166670 | 0.858288 | 9.132677e-63 | -8.615850e-47 |
| Msa1050100 | Msa1203560 | 0.845070 | 5.106309e-59 | -8.615850e-47 |
| Msa1050100 | Msa1237040 | 0.806986 | 6.301966e-50 | -8.615850e-47 |
| Msa1050100 | Msa1255830 | 0.846130 | 2.634698e-59 | -8.615850e-47 |
| Msa1050100 | Msa1255850 | 0.855084 | 7.997867e-62 | -8.615850e-47 |
| Msa1050100 | Msa1258460 | 0.801791 | 7.620518e-49 | -8.615850e-47 |
| Msa1050100 | Msa1284060 | 0.803131 | 4.036159e-49 | -8.615850e-47 |
| Msa1050100 | Msa1296090 | 0.818131 | 2.300575e-52 | -8.615850e-47 |
| Msa1050100 | Msa1341780 | 0.869037 | 4.178376e-66 | -8.615850e-47 |
| Msa1050100 | Msa1351020 | 0.823474 | 1.358262e-53 | -8.615850e-47 |
| Msa1050100 | Msa1353300 | 0.816217 | 6.197237e-52 | -8.615850e-47 |
| Msa1050100 | Msa1367540 | 0.864273 | 1.368800e-64 | -8.615850e-47 |
| Msa1050100 | Msa1371410 | 0.823962 | 1.044204e-53 | -8.615850e-47 |
| Msa1050100 | Msa1385480 | 0.804814 | 1.803161e-49 | -8.615850e-47 |
| Msa1050100 | Msa1415620 | 0.821497 | 3.913282e-53 | -8.615850e-47 |
| Msa1050100 | Msa1424570 | 0.872743 | 2.515416e-67 | -8.615850e-47 |
| Msa1050100 | Msa1446410 | 0.809948 | 1.470225e-50 | -8.615850e-47 |
| Msa1050100 | Msa1449160 | 0.823220 | 1.557583e-53 | -8.615850e-47 |
| Msa1050100 | Msa1450560 | 0.844466 | 7.428573e-59 | -8.615850e-47 |
| Msa0265200 | Msa1050100 | 0.820650 | 6.132572e-53 | -8.615850e-47 |
| Msa0270160 | Msa1050100 | 0.812216 | 4.739214e-51 | -8.615850e-47 |
| Msa0272540 | Msa1050100 | 0.809473 | 1.859356e-50 | -8.615850e-47 |
| Msa0277600 | Msa1050100 | 0.852726 | 3.820420e-61 | -8.615850e-47 |
| Msa0281330 | Msa1050100 | 0.832102 | 1.144730e-55 | -8.615850e-47 |
| Msa0281370 | Msa1050100 | 0.825171 | 5.421560e-54 | -8.615850e-47 |
| Msa0313060 | Msa1050100 | 0.832597 | 8.634558e-56 | -8.615850e-47 |
| Msa0315430 | Msa1050100 | 0.835757 | 1.393648e-56 | -8.615850e-47 |
| Msa0340560 | Msa1050100 | 0.813151 | 2.959019e-51 | -8.615850e-47 |
| Msa0342850 | Msa1050100 | 0.801513 | 8.691674e-49 | -8.615850e-47 |
| Msa0517480 | Msa1050100 | 0.809305 | 2.020476e-50 | -8.615850e-47 |
| Msa0521510 | Msa1050100 | 0.809324 | 2.001798e-50 | -8.615850e-47 |
| Msa0524680 | Msa1050100 | 0.801368 | 9.306578e-49 | -8.615850e-47 |
| Msa0529900 | Msa1050100 | 0.840798 | 6.999210e-58 | -8.615850e-47 |
| Msa0547920 | Msa1050100 | 0.854806 | 9.632041e-62 | -8.615850e-47 |
| Msa0557720 | Msa1050100 | 0.805932 | 1.051514e-49 | -8.615850e-47 |
| Msa0573550 | Msa1050100 | 0.854880 | 9.165478e-62 | -8.615850e-47 |
| Msa0575960 | Msa1050100 | -0.808329 | 3.266862e-50 | -8.615850e-47 |
| Msa0582070 | Msa1050100 | 0.808489 | 3.019915e-50 | -8.615850e-47 |
| Msa0861320 | Msa1050100 | 0.804553 | 2.043979e-49 | -8.615850e-47 |
| Msa0929700 | Msa1050100 | 0.861647 | 8.854303e-64 | -8.615850e-47 |
| Msa0930100 | Msa1050100 | 0.831344 | 1.760364e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050100 | MtrunA17_Chr7g0243211 | 97.358 | 265 | 7 | 0 | 1 | 265 | 1 | 265 | 0.0 | 533 |
| Msa1050100 | MtrunA17_Chr4g0005611 | 96.591 | 264 | 9 | 0 | 1 | 264 | 1 | 264 | 0.0 | 527 |
| Msa1050100 | MtrunA17_Chr5g0403311 | 96.414 | 251 | 9 | 0 | 1 | 251 | 1 | 251 | 0.0 | 504 |
| Msa1050100 | MtrunA17_Chr8g0357951 | 96.414 | 251 | 9 | 0 | 1 | 251 | 1 | 251 | 0.0 | 504 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1050100 | AT5G07090.1 | 91.255 | 263 | 22 | 1 | 1 | 263 | 1 | 262 | 0.0 | 510 |
| Msa1050100 | AT2G17360.1 | 91.154 | 260 | 23 | 0 | 1 | 260 | 1 | 260 | 0.0 | 509 |
| Msa1050100 | AT5G58420.1 | 91.255 | 263 | 22 | 1 | 1 | 263 | 1 | 262 | 0.0 | 509 |
| Msa1050100 | AT5G07090.3 | 90.612 | 245 | 22 | 1 | 19 | 263 | 1 | 244 | 7.67e-171 | 471 |
| Msa1050100 | AT5G07090.2 | 90.612 | 245 | 22 | 1 | 19 | 263 | 1 | 244 | 7.67e-171 | 471 |
| Msa1050100 | AT2G17360.2 | 91.713 | 181 | 15 | 0 | 1 | 181 | 1 | 181 | 7.05e-126 | 355 |
Find 106 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAATGTTGCCGCGCCTTT+TGG | 0.238409 | 7_2:-13983441 | None:intergenic |
| TTGTGTCATTGGCCTTAATA+AGG | 0.244306 | 7_2:-13985614 | None:intergenic |
| AGTATCACAAACGATCTAAA+TGG | 0.327880 | 7_2:-13985989 | None:intergenic |
| GTCTAGTTTGATTGTGTCAT+TGG | 0.330535 | 7_2:-13985625 | None:intergenic |
| CAATTTGATACCTCTGCCTT+TGG | 0.333358 | 7_2:-13985874 | None:intergenic |
| TTGGGTAATGTCTTCACTAT+TGG | 0.340154 | 7_2:+13985822 | Msa1050100:CDS |
| CTATCCTGATCCCCTTATTA+AGG | 0.341569 | 7_2:+13985602 | Msa1050100:CDS |
| TTATCAAGCATCCAATGTTT+TGG | 0.352792 | 7_2:-13984769 | None:intergenic |
| CACATCAAATTTGATGAAAT+CGG | 0.353228 | 7_2:-13985667 | None:intergenic |
| CAGCTAGGCTAGTTCAAAAT+CGG | 0.356500 | 7_2:-13986056 | None:intergenic |
| ATTTGAACACATTATATTGC+CGG | 0.361559 | 7_2:+13985957 | Msa1050100:three_prime_UTR |
| AAGGTACGATCTGTTCAGTT+TGG | 0.367239 | 7_2:+13985531 | Msa1050100:CDS |
| CAGCGCCATGTTCTAGTTGA+TGG | 0.370577 | 7_2:+13985024 | Msa1050100:CDS |
| TGTGGTCCAGATGACGGCTT+TGG | 0.371859 | 7_2:-13984910 | None:intergenic |
| TATCAAAATTGTGATACAAT+TGG | 0.373482 | 7_2:-13986127 | None:intergenic |
| TGGTGACTGGAGGAAGGAAC+AGG | 0.391690 | 7_2:+13985703 | Msa1050100:CDS |
| AGGTACGATCTGTTCAGTTT+GGG | 0.392472 | 7_2:+13985532 | Msa1050100:CDS |
| GTGGTCCAGATGACGGCTTT+GGG | 0.392493 | 7_2:-13984909 | None:intergenic |
| TGATGTGGGGAATGTTGTTA+TGG | 0.412773 | 7_2:+13985683 | Msa1050100:CDS |
| CATGAGTTTGCAACCCGATT+GGG | 0.418547 | 7_2:+13985804 | Msa1050100:CDS |
| GGGAATGTTGTTATGGTGAC+TGG | 0.420835 | 7_2:+13985690 | Msa1050100:CDS |
| GCGGATTGTACGCCCATCAT+AGG | 0.425274 | 7_2:-13985580 | None:intergenic |
| TGTGTCATTGGCCTTAATAA+GGG | 0.427302 | 7_2:-13985613 | None:intergenic |
| CAGGCCCCAAAGCCGTCATC+TGG | 0.431538 | 7_2:+13984904 | Msa1050100:intron |
| TATGTAACCTGAAGTAAAAT+GGG | 0.433464 | 7_2:-13986166 | None:intergenic |
| ATCTAAATGGCTACATTGTC+CGG | 0.434123 | 7_2:-13985976 | None:intergenic |
| GCGGATGGCTGCTTCTCAAC+AGG | 0.434949 | 7_2:+13985920 | Msa1050100:CDS |
| CCGTATCTGAACACCTATGA+TGG | 0.435718 | 7_2:+13985567 | Msa1050100:CDS |
| AATTTGATACCTCTGCCTTT+GGG | 0.436861 | 7_2:-13985873 | None:intergenic |
| ACAGACACACAAGAACCAAA+AGG | 0.444548 | 7_2:+13983426 | Msa1050100:five_prime_UTR |
| CTGTTCAGTTTGGGCAGAAA+GGG | 0.449618 | 7_2:+13985541 | Msa1050100:CDS |
| TGGCAAAGGGTCGAAACCTT+GGG | 0.450674 | 7_2:+13985842 | Msa1050100:CDS |
| TTAGTCTGTTCCTCAAGATA+AGG | 0.453432 | 7_2:-13984960 | None:intergenic |
| GTGTTGGTGTCATCAAGAAC+AGG | 0.454082 | 7_2:+13985730 | Msa1050100:CDS |
| CATCTGGACCACACAAATCA+AGG | 0.461785 | 7_2:+13984920 | Msa1050100:CDS |
| TGCCTTTGATCCTTATCTTG+AGG | 0.467081 | 7_2:+13984950 | Msa1050100:CDS |
| TTGGCAAAGGGTCGAAACCT+TGG | 0.468363 | 7_2:+13985841 | Msa1050100:CDS |
| GATTCCGTCTCCACTCTGTA+AGG | 0.474226 | 7_2:+13985341 | Msa1050100:CDS |
| TTGGCCTTAATAAGGGGATC+AGG | 0.486385 | 7_2:-13985606 | None:intergenic |
| TAGTGAAGACATTACCCAAT+CGG | 0.493541 | 7_2:-13985818 | None:intergenic |
| GAAGTAAAATGGGAGCATAA+TGG | 0.495497 | 7_2:-13986156 | None:intergenic |
| CATTGGATGCTTGATAAGCT+TGG | 0.495944 | 7_2:+13984775 | Msa1050100:CDS |
| TGTCTGTGTGCGAGAGTTGT+GGG | 0.499581 | 7_2:-13983410 | None:intergenic |
| TCTGTTCAGTTTGGGCAGAA+AGG | 0.500744 | 7_2:+13985540 | Msa1050100:CDS |
| AGCTAGGCTAGTTCAAAATC+GGG | 0.505304 | 7_2:-13986055 | None:intergenic |
| CGATTTCATCAAATTTGATG+TGG | 0.506182 | 7_2:+13985668 | Msa1050100:CDS |
| CGTCTTCTCTATGACACTAA+AGG | 0.511614 | 7_2:+13985316 | Msa1050100:CDS |
| ATTCATGTCCAGGATGCTAC+TGG | 0.515866 | 7_2:+13985780 | Msa1050100:CDS |
| AGTGAAGACATTACCCAATC+GGG | 0.517824 | 7_2:-13985817 | None:intergenic |
| TCATGAGTTTGCAACCCGAT+TGG | 0.519695 | 7_2:+13985803 | Msa1050100:CDS |
| ACTCATGACCAGTAGCATCC+TGG | 0.521067 | 7_2:-13985788 | None:intergenic |
| GATTTCATCAAATTTGATGT+GGG | 0.526677 | 7_2:+13985669 | Msa1050100:CDS |
| CCATCATAGGTGTTCAGATA+CGG | 0.529767 | 7_2:-13985567 | None:intergenic |
| TGACACAATCAAACTAGACT+TGG | 0.533545 | 7_2:+13985629 | Msa1050100:CDS |
| GTGTCTGTGTGCGAGAGTTG+TGG | 0.543982 | 7_2:-13983411 | None:intergenic |
| TGTGCGAGAGTTGTGGGAGG+TGG | 0.553984 | 7_2:-13983404 | None:intergenic |
| AGTAGCATCCTGGACATGAA+TGG | 0.557858 | 7_2:-13985778 | None:intergenic |
| TCTCGTGTATTTCAGGCAAG+AGG | 0.559812 | 7_2:+13984715 | Msa1050100:intron |
| CCCATACCCATAAAACCAGC+AGG | 0.563703 | 7_2:-13985072 | None:intergenic |
| AATGTCTTCACTATTGGCAA+AGG | 0.564811 | 7_2:+13985828 | Msa1050100:CDS |
| TATCAAATTGACAGTCATTG+AGG | 0.565699 | 7_2:+13985887 | Msa1050100:CDS |
| GGCTCAATGCTCCAAAACAT+TGG | 0.567027 | 7_2:+13984758 | Msa1050100:CDS |
| GATTTGTGTGGTCCAGATGA+CGG | 0.567229 | 7_2:-13984916 | None:intergenic |
| AGGCACTCCCTTGATTTGTG+TGG | 0.570898 | 7_2:-13984928 | None:intergenic |
| ATTTCATCAAATTTGATGTG+GGG | 0.571477 | 7_2:+13985670 | Msa1050100:CDS |
| ATGTCTTCACTATTGGCAAA+GGG | 0.574289 | 7_2:+13985829 | Msa1050100:CDS |
| GGAAGGAACAGGGGTCGTGT+TGG | 0.575426 | 7_2:+13985714 | Msa1050100:CDS |
| TCAAGATAAGGATCAAAGGC+AGG | 0.576690 | 7_2:-13984948 | None:intergenic |
| ACAAAATTAAACTCACAGCT+AGG | 0.578329 | 7_2:-13986071 | None:intergenic |
| GTGTCATTGGCCTTAATAAG+GGG | 0.578877 | 7_2:-13985612 | None:intergenic |
| TTCCTCAAGATAAGGATCAA+AGG | 0.581073 | 7_2:-13984952 | None:intergenic |
| TGACAGTCATTGAGGAGGCA+AGG | 0.581078 | 7_2:+13985895 | Msa1050100:CDS |
| CATCCCTTACAGAGTGGAGA+CGG | 0.583231 | 7_2:-13985345 | None:intergenic |
| CTTTAGTGTCATAGAGAAGA+CGG | 0.588339 | 7_2:-13985315 | None:intergenic |
| GGTGACTGGAGGAAGGAACA+GGG | 0.589958 | 7_2:+13985704 | Msa1050100:CDS |
| AACATGGCGCTGCATCAAGA+TGG | 0.592027 | 7_2:-13985013 | None:intergenic |
| CGTATCTGAACACCTATGAT+GGG | 0.593211 | 7_2:+13985568 | Msa1050100:CDS |
| TGGATGCTTGATAAGCTTGG+CGG | 0.599051 | 7_2:+13984778 | Msa1050100:CDS |
| TTTGCAGTTTAAGCTTTGCA+AGG | 0.600506 | 7_2:+13985512 | Msa1050100:intron |
| CTTCATCATCCCTTACAGAG+TGG | 0.602533 | 7_2:-13985351 | None:intergenic |
| TGTAAGGGATGATGAAGCAA+AGG | 0.603418 | 7_2:+13985357 | Msa1050100:CDS |
| ATTCCGTCTCCACTCTGTAA+GGG | 0.605035 | 7_2:+13985342 | Msa1050100:CDS |
| GTTTGAAGAAACATTTGAAG+CGG | 0.606217 | 7_2:+13984737 | Msa1050100:CDS |
| GATGGCTGCTTCTCAACAGG+TGG | 0.606348 | 7_2:+13985923 | Msa1050100:CDS |
| GTGTCTCTTCCCAAAGGCAG+AGG | 0.606870 | 7_2:+13985864 | Msa1050100:CDS |
| TCATTGAGGAGGCAAGGAAG+CGG | 0.608089 | 7_2:+13985901 | Msa1050100:CDS |
| CTTTGCCATCAACTAGAACA+TGG | 0.608587 | 7_2:-13985029 | None:intergenic |
| CTGTTCACAACACACCAACA+TGG | 0.610016 | 7_2:+13983480 | Msa1050100:exon |
| CACACAAGAACCAAAAGGCG+CGG | 0.611058 | 7_2:+13983431 | Msa1050100:five_prime_UTR |
| ACAGACAAGACATATCCTGC+TGG | 0.627165 | 7_2:+13985057 | Msa1050100:CDS |
| TGAGGAGGCAAGGAAGCGGA+TGG | 0.627602 | 7_2:+13985905 | Msa1050100:CDS |
| ATCTGGACCACACAAATCAA+GGG | 0.632532 | 7_2:+13984921 | Msa1050100:CDS |
| TGGTCCAGATGACGGCTTTG+GGG | 0.632723 | 7_2:-13984908 | None:intergenic |
| CCTTGGGTGTCTCTTCCCAA+AGG | 0.641736 | 7_2:+13985858 | Msa1050100:CDS |
| TAATAAGGGGATCAGGATAG+CGG | 0.659430 | 7_2:-13985599 | None:intergenic |
| AACAGAAACGAACGGCGCAG+TGG | 0.661606 | 7_2:-13983462 | None:intergenic |
| CAAATTGACAGTCATTGAGG+AGG | 0.668339 | 7_2:+13985890 | Msa1050100:CDS |
| CCTTTGGGAAGAGACACCCA+AGG | 0.673569 | 7_2:-13985858 | None:intergenic |
| TGAAGACAGACTAACCATGT+TGG | 0.677975 | 7_2:-13983494 | None:intergenic |
| TTGTTATGGTGACTGGAGGA+AGG | 0.681094 | 7_2:+13985697 | Msa1050100:CDS |
| AATGTTGTTATGGTGACTGG+AGG | 0.681623 | 7_2:+13985693 | Msa1050100:CDS |
| AAGAACAGGGAGAAACACAA+AGG | 0.683807 | 7_2:+13985744 | Msa1050100:CDS |
| GTGACTGGAGGAAGGAACAG+GGG | 0.692053 | 7_2:+13985705 | Msa1050100:CDS |
| TGTTGGTGTCATCAAGAACA+GGG | 0.707054 | 7_2:+13985731 | Msa1050100:CDS |
| CTGTGTGCGAGAGTTGTGGG+AGG | 0.732411 | 7_2:-13983407 | None:intergenic |
| GTGTTGTGAACAGAAACGAA+CGG | 0.759146 | 7_2:-13983470 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTACTTTGAATAAT+TGG | + | chr7_2:13985137-13985156 | Msa1050100:intron | 10.0% |
| !! | TTATATTTATATAAACAACA+TGG | + | chr7_2:13985440-13985459 | Msa1050100:intron | 10.0% |
| !! | TTATAAAATCAATATAAAGA+AGG | - | chr7_2:13985471-13985490 | None:intergenic | 10.0% |
| !!! | TTTTATGTTCTTAACTAAAA+CGG | - | chr7_2:13983761-13983780 | None:intergenic | 15.0% |
| !! | AAATCATCAAACATTATTAA+TGG | - | chr7_2:13984275-13984294 | None:intergenic | 15.0% |
| !! | TTAATAATGTATAATGATGT+AGG | + | chr7_2:13984386-13984405 | Msa1050100:intron | 15.0% |
| !!! | ACATCTACAAATAATTTTAA+GGG | - | chr7_2:13984431-13984450 | None:intergenic | 15.0% |
| !!! | CAACAAAAGTACAAAAAAAA+AGG | - | chr7_2:13983574-13983593 | None:intergenic | 20.0% |
| !! | TTTATGTTCTTAACTAAAAC+GGG | - | chr7_2:13983760-13983779 | None:intergenic | 20.0% |
| !!! | GAGTTTATTTCAAGTTAATT+TGG | - | chr7_2:13983892-13983911 | None:intergenic | 20.0% |
| !!! | TTATGTTGTGAATATTGATT+TGG | + | chr7_2:13984121-13984140 | Msa1050100:intron | 20.0% |
| !!! | CACATCTACAAATAATTTTA+AGG | - | chr7_2:13984432-13984451 | None:intergenic | 20.0% |
| !! | CTTAAAATTATTTGTAGATG+TGG | + | chr7_2:13984430-13984449 | Msa1050100:intron | 20.0% |
| !! | AAATAATATAAACAACACAG+TGG | - | chr7_2:13984830-13984849 | None:intergenic | 20.0% |
| !! | AAAAATTACAGATATTGTGA+AGG | - | chr7_2:13985393-13985412 | None:intergenic | 20.0% |
| !! | TATTTATATAAACAACATGG+TGG | + | chr7_2:13985443-13985462 | Msa1050100:intron | 20.0% |
| !! | TATCAAAATTGTGATACAAT+TGG | - | chr7_2:13986130-13986149 | None:intergenic | 20.0% |
| !! | AAAAGTGTAAATGTAGTGTA+GGG | - | chr7_2:13983521-13983540 | None:intergenic | 25.0% |
| !! | AAAAAGTGTAAATGTAGTGT+AGG | - | chr7_2:13983522-13983541 | None:intergenic | 25.0% |
| !!! | ACTTTTGTTGATTGTAATGT+TGG | + | chr7_2:13983584-13983603 | Msa1050100:intron | 25.0% |
| !!! | CTTTTGTTGATTGTAATGTT+GGG | + | chr7_2:13983585-13983604 | Msa1050100:intron | 25.0% |
| !!! | TGTAATGTTGGGTTTTATTT+TGG | + | chr7_2:13983596-13983615 | Msa1050100:intron | 25.0% |
| ! | AACGAGTAAGAAAAAATCAT+TGG | - | chr7_2:13984184-13984203 | None:intergenic | 25.0% |
| ! | AAACCTAGAATAAGAAAGAA+AGG | - | chr7_2:13984534-13984553 | None:intergenic | 25.0% |
| ! | ATACTAGCAAAATTCTCAAA+TGG | - | chr7_2:13985175-13985194 | None:intergenic | 25.0% |
| ! | TTTAGACAATATAACCAAGT+AGG | + | chr7_2:13985194-13985213 | Msa1050100:intron | 25.0% |
| ! | CACATCAAATTTGATGAAAT+CGG | - | chr7_2:13985670-13985689 | None:intergenic | 25.0% |
| ! | GATTTCATCAAATTTGATGT+GGG | + | chr7_2:13985669-13985688 | Msa1050100:CDS | 25.0% |
| ! | ATTTCATCAAATTTGATGTG+GGG | + | chr7_2:13985670-13985689 | Msa1050100:CDS | 25.0% |
| ! | ATTTGAACACATTATATTGC+CGG | + | chr7_2:13985957-13985976 | Msa1050100:three_prime_UTR | 25.0% |
| TTTGTGTGTAATGTTGAATG+TGG | + | chr7_2:13983704-13983723 | Msa1050100:intron | 30.0% | |
| AATATACGAGTGGATAACAT+TGG | - | chr7_2:13983832-13983851 | None:intergenic | 30.0% | |
| ATTTAGATTAGACAGTCAAC+TGG | + | chr7_2:13983920-13983939 | Msa1050100:intron | 30.0% | |
| ! | TTGTATGCAGTAACTGTTTT+AGG | - | chr7_2:13983962-13983981 | None:intergenic | 30.0% |
| TGCATACAATCTCATTTCAT+TGG | + | chr7_2:13983973-13983992 | Msa1050100:intron | 30.0% | |
| AGATGTTTACTCTTGTCTTA+AGG | + | chr7_2:13984084-13984103 | Msa1050100:intron | 30.0% | |
| !! | TAGTTCTAAGCCTGAATAAT+TGG | + | chr7_2:13984315-13984334 | Msa1050100:intron | 30.0% |
| AATTATTTGTAGATGTGGCT+AGG | + | chr7_2:13984435-13984454 | Msa1050100:intron | 30.0% | |
| TAACTGGGAATACTAAACAA+CGG | - | chr7_2:13984494-13984513 | None:intergenic | 30.0% | |
| CTACCTTTCTTTCTTATTCT+AGG | + | chr7_2:13984528-13984547 | Msa1050100:intron | 30.0% | |
| CTTATGTTGTATGCTTTCAT+CGG | + | chr7_2:13984580-13984599 | Msa1050100:intron | 30.0% | |
| ! | TAGTTTTTCTCGTGTATTTC+AGG | + | chr7_2:13984708-13984727 | Msa1050100:intron | 30.0% |
| GTTTGAAGAAACATTTGAAG+CGG | + | chr7_2:13984737-13984756 | Msa1050100:CDS | 30.0% | |
| ! | TTATCAAGCATCCAATGTTT+TGG | - | chr7_2:13984772-13984791 | None:intergenic | 30.0% |
| ! | ATTGAGTTTCTTTGTTGTAC+AGG | + | chr7_2:13984885-13984904 | Msa1050100:intron | 30.0% |
| ! | TTTAGAATCACAAACCTACT+TGG | - | chr7_2:13985211-13985230 | None:intergenic | 30.0% |
| CGATTTCATCAAATTTGATG+TGG | + | chr7_2:13985668-13985687 | Msa1050100:CDS | 30.0% | |
| TATCAAATTGACAGTCATTG+AGG | + | chr7_2:13985887-13985906 | Msa1050100:CDS | 30.0% | |
| AGTATCACAAACGATCTAAA+TGG | - | chr7_2:13985992-13986011 | None:intergenic | 30.0% | |
| ACAAAATTAAACTCACAGCT+AGG | - | chr7_2:13986074-13986093 | None:intergenic | 30.0% | |
| !! | GCTGTGAGTTTAATTTTGTT+TGG | + | chr7_2:13986075-13986094 | Msa1050100:three_prime_UTR | 30.0% |
| TACAATCTCATTTCATTGGC+TGG | + | chr7_2:13983977-13983996 | Msa1050100:intron | 35.0% | |
| ! | ACAATCTCATTTCATTGGCT+GGG | + | chr7_2:13983978-13983997 | Msa1050100:intron | 35.0% |
| TACTCTTGTCTTAAGGTTTC+AGG | + | chr7_2:13984091-13984110 | Msa1050100:intron | 35.0% | |
| ACTCTTGTCTTAAGGTTTCA+GGG | + | chr7_2:13984092-13984111 | Msa1050100:intron | 35.0% | |
| AGAACTAGTACTAGTAGACA+TGG | - | chr7_2:13984302-13984321 | None:intergenic | 35.0% | |
| AATACTAAACAACGGAACTG+AGG | - | chr7_2:13984486-13984505 | None:intergenic | 35.0% | |
| ! | GTTTGAAACACTCTGTAACT+GGG | - | chr7_2:13984509-13984528 | None:intergenic | 35.0% |
| ! | AGTTTGAAACACTCTGTAAC+TGG | - | chr7_2:13984510-13984529 | None:intergenic | 35.0% |
| TCAGAATGATGTCCATACAA+AGG | - | chr7_2:13984806-13984825 | None:intergenic | 35.0% | |
| TTCCTCAAGATAAGGATCAA+AGG | - | chr7_2:13984955-13984974 | None:intergenic | 35.0% | |
| TTAGTCTGTTCCTCAAGATA+AGG | - | chr7_2:13984963-13984982 | None:intergenic | 35.0% | |
| !!! | ACATATCCTGCTGGTTTTAT+GGG | + | chr7_2:13985066-13985085 | Msa1050100:CDS | 35.0% |
| TTAACAATGCCGTGCAATTT+AGG | - | chr7_2:13985105-13985124 | None:intergenic | 35.0% | |
| CTTTAGTGTCATAGAGAAGA+CGG | - | chr7_2:13985318-13985337 | None:intergenic | 35.0% | |
| AAGCTTAAACTGCAAAAGGT+TGG | - | chr7_2:13985508-13985527 | None:intergenic | 35.0% | |
| TGCAAAGCTTAAACTGCAAA+AGG | - | chr7_2:13985512-13985531 | None:intergenic | 35.0% | |
| TTTGCAGTTTAAGCTTTGCA+AGG | + | chr7_2:13985512-13985531 | Msa1050100:intron | 35.0% | |
| !! | TGTGTCATTGGCCTTAATAA+GGG | - | chr7_2:13985616-13985635 | None:intergenic | 35.0% |
| !! | TTGTGTCATTGGCCTTAATA+AGG | - | chr7_2:13985617-13985636 | None:intergenic | 35.0% |
| ! | GTCTAGTTTGATTGTGTCAT+TGG | - | chr7_2:13985628-13985647 | None:intergenic | 35.0% |
| TGACACAATCAAACTAGACT+TGG | + | chr7_2:13985629-13985648 | Msa1050100:CDS | 35.0% | |
| TAGTGAAGACATTACCCAAT+CGG | - | chr7_2:13985821-13985840 | None:intergenic | 35.0% | |
| TTGGGTAATGTCTTCACTAT+TGG | + | chr7_2:13985822-13985841 | Msa1050100:CDS | 35.0% | |
| AATGTCTTCACTATTGGCAA+AGG | + | chr7_2:13985828-13985847 | Msa1050100:CDS | 35.0% | |
| ATGTCTTCACTATTGGCAAA+GGG | + | chr7_2:13985829-13985848 | Msa1050100:CDS | 35.0% | |
| AATTTGATACCTCTGCCTTT+GGG | - | chr7_2:13985876-13985895 | None:intergenic | 35.0% | |
| ATCTAAATGGCTACATTGTC+CGG | - | chr7_2:13985979-13985998 | None:intergenic | 35.0% | |
| ! | TCGTTTGTGATACTGTTTTG+CGG | + | chr7_2:13985998-13986017 | Msa1050100:three_prime_UTR | 35.0% |
| ACAGACACACAAGAACCAAA+AGG | + | chr7_2:13983426-13983445 | Msa1050100:five_prime_UTR | 40.0% | |
| GTGTTGTGAACAGAAACGAA+CGG | - | chr7_2:13983473-13983492 | None:intergenic | 40.0% | |
| TGAAGACAGACTAACCATGT+TGG | - | chr7_2:13983497-13983516 | None:intergenic | 40.0% | |
| GTATATTCGCTAATCGCGAT+AGG | + | chr7_2:13983845-13983864 | Msa1050100:intron | 40.0% | |
| TGTCTTAAGGTTTCAGGGTT+AGG | + | chr7_2:13984097-13984116 | Msa1050100:intron | 40.0% | |
| ACGCTGATGTCCAATTATTC+AGG | - | chr7_2:13984328-13984347 | None:intergenic | 40.0% | |
| CATTGGATGCTTGATAAGCT+TGG | + | chr7_2:13984775-13984794 | Msa1050100:CDS | 40.0% | |
| ATCTGGACCACACAAATCAA+GGG | + | chr7_2:13984921-13984940 | Msa1050100:CDS | 40.0% | |
| TCAAGATAAGGATCAAAGGC+AGG | - | chr7_2:13984951-13984970 | None:intergenic | 40.0% | |
| TGCCTTTGATCCTTATCTTG+AGG | + | chr7_2:13984950-13984969 | Msa1050100:CDS | 40.0% | |
| CTTTGCCATCAACTAGAACA+TGG | - | chr7_2:13985032-13985051 | None:intergenic | 40.0% | |
| !!! | GACATATCCTGCTGGTTTTA+TGG | + | chr7_2:13985065-13985084 | Msa1050100:CDS | 40.0% |
| ! | GTTTTATGGGTATGGGCATT+AGG | + | chr7_2:13985079-13985098 | Msa1050100:intron | 40.0% |
| !!! | CGGAAGTTTTCATTGGTCTT+GGG | - | chr7_2:13985298-13985317 | None:intergenic | 40.0% |
| !! | ACGGAAGTTTTCATTGGTCT+TGG | - | chr7_2:13985299-13985318 | None:intergenic | 40.0% |
| ! | GAGAAGACGGAAGTTTTCAT+TGG | - | chr7_2:13985305-13985324 | None:intergenic | 40.0% |
| CGTCTTCTCTATGACACTAA+AGG | + | chr7_2:13985316-13985335 | Msa1050100:CDS | 40.0% | |
| TGTAAGGGATGATGAAGCAA+AGG | + | chr7_2:13985357-13985376 | Msa1050100:CDS | 40.0% | |
| AAACTGCAAAAGGTTGGAGA+GGG | - | chr7_2:13985502-13985521 | None:intergenic | 40.0% | |
| TAAACTGCAAAAGGTTGGAG+AGG | - | chr7_2:13985503-13985522 | None:intergenic | 40.0% | |
| AAGGTACGATCTGTTCAGTT+TGG | + | chr7_2:13985531-13985550 | Msa1050100:CDS | 40.0% | |
| AGGTACGATCTGTTCAGTTT+GGG | + | chr7_2:13985532-13985551 | Msa1050100:CDS | 40.0% | |
| CCATCATAGGTGTTCAGATA+CGG | - | chr7_2:13985570-13985589 | None:intergenic | 40.0% | |
| CGTATCTGAACACCTATGAT+GGG | + | chr7_2:13985568-13985587 | Msa1050100:CDS | 40.0% | |
| TAATAAGGGGATCAGGATAG+CGG | - | chr7_2:13985602-13985621 | None:intergenic | 40.0% | |
| CTATCCTGATCCCCTTATTA+AGG | + | chr7_2:13985602-13985621 | Msa1050100:CDS | 40.0% | |
| !! | GTGTCATTGGCCTTAATAAG+GGG | - | chr7_2:13985615-13985634 | None:intergenic | 40.0% |
| TGATGTGGGGAATGTTGTTA+TGG | + | chr7_2:13985683-13985702 | Msa1050100:CDS | 40.0% | |
| AATGTTGTTATGGTGACTGG+AGG | + | chr7_2:13985693-13985712 | Msa1050100:CDS | 40.0% | |
| !! | TGTTGGTGTCATCAAGAACA+GGG | + | chr7_2:13985731-13985750 | Msa1050100:CDS | 40.0% |
| AAGAACAGGGAGAAACACAA+AGG | + | chr7_2:13985744-13985763 | Msa1050100:CDS | 40.0% | |
| !!! | TTTTGAGACCATTCATGTCC+AGG | + | chr7_2:13985770-13985789 | Msa1050100:CDS | 40.0% |
| AGTGAAGACATTACCCAATC+GGG | - | chr7_2:13985820-13985839 | None:intergenic | 40.0% | |
| CAATTTGATACCTCTGCCTT+TGG | - | chr7_2:13985877-13985896 | None:intergenic | 40.0% | |
| CAAATTGACAGTCATTGAGG+AGG | + | chr7_2:13985890-13985909 | Msa1050100:CDS | 40.0% | |
| ! | AGCTAGGCTAGTTCAAAATC+GGG | - | chr7_2:13986058-13986077 | None:intergenic | 40.0% |
| ! | CAGCTAGGCTAGTTCAAAAT+CGG | - | chr7_2:13986059-13986078 | None:intergenic | 40.0% |
| CTGTTCACAACACACCAACA+TGG | + | chr7_2:13983480-13983499 | Msa1050100:exon | 45.0% | |
| GCGATTAGCGAATATACGAG+TGG | - | chr7_2:13983842-13983861 | None:intergenic | 45.0% | |
| TCTCGTGTATTTCAGGCAAG+AGG | + | chr7_2:13984715-13984734 | Msa1050100:intron | 45.0% | |
| GGCTCAATGCTCCAAAACAT+TGG | + | chr7_2:13984758-13984777 | Msa1050100:CDS | 45.0% | |
| TGGATGCTTGATAAGCTTGG+CGG | + | chr7_2:13984778-13984797 | Msa1050100:CDS | 45.0% | |
| GATTTGTGTGGTCCAGATGA+CGG | - | chr7_2:13984919-13984938 | None:intergenic | 45.0% | |
| CATCTGGACCACACAAATCA+AGG | + | chr7_2:13984920-13984939 | Msa1050100:CDS | 45.0% | |
| ACAGACAAGACATATCCTGC+TGG | + | chr7_2:13985057-13985076 | Msa1050100:CDS | 45.0% | |
| !!! | TCCTGCTGGTTTTATGGGTA+TGG | + | chr7_2:13985071-13985090 | Msa1050100:intron | 45.0% |
| !!! | CCTGCTGGTTTTATGGGTAT+GGG | + | chr7_2:13985072-13985091 | Msa1050100:intron | 45.0% |
| GGCATTAGGCCTAAATTGCA+CGG | + | chr7_2:13985093-13985112 | Msa1050100:intron | 45.0% | |
| ATTCCGTCTCCACTCTGTAA+GGG | + | chr7_2:13985342-13985361 | Msa1050100:CDS | 45.0% | |
| CTTCATCATCCCTTACAGAG+TGG | - | chr7_2:13985354-13985373 | None:intergenic | 45.0% | |
| TCTGTTCAGTTTGGGCAGAA+AGG | + | chr7_2:13985540-13985559 | Msa1050100:CDS | 45.0% | |
| CTGTTCAGTTTGGGCAGAAA+GGG | + | chr7_2:13985541-13985560 | Msa1050100:CDS | 45.0% | |
| CCGTATCTGAACACCTATGA+TGG | + | chr7_2:13985567-13985586 | Msa1050100:CDS | 45.0% | |
| !! | TTGGCCTTAATAAGGGGATC+AGG | - | chr7_2:13985609-13985628 | None:intergenic | 45.0% |
| GGGAATGTTGTTATGGTGAC+TGG | + | chr7_2:13985690-13985709 | Msa1050100:CDS | 45.0% | |
| TTGTTATGGTGACTGGAGGA+AGG | + | chr7_2:13985697-13985716 | Msa1050100:CDS | 45.0% | |
| !! | GTGTTGGTGTCATCAAGAAC+AGG | + | chr7_2:13985730-13985749 | Msa1050100:CDS | 45.0% |
| AGTAGCATCCTGGACATGAA+TGG | - | chr7_2:13985781-13985800 | None:intergenic | 45.0% | |
| ATTCATGTCCAGGATGCTAC+TGG | + | chr7_2:13985780-13985799 | Msa1050100:CDS | 45.0% | |
| TCATGAGTTTGCAACCCGAT+TGG | + | chr7_2:13985803-13985822 | Msa1050100:CDS | 45.0% | |
| CATGAGTTTGCAACCCGATT+GGG | + | chr7_2:13985804-13985823 | Msa1050100:CDS | 45.0% | |
| TGTCTGTGTGCGAGAGTTGT+GGG | - | chr7_2:13983413-13983432 | None:intergenic | 50.0% | |
| CACACAAGAACCAAAAGGCG+CGG | + | chr7_2:13983431-13983450 | Msa1050100:five_prime_UTR | 50.0% | |
| !! | AGGCACTCCCTTGATTTGTG+TGG | - | chr7_2:13984931-13984950 | None:intergenic | 50.0% |
| AACATGGCGCTGCATCAAGA+TGG | - | chr7_2:13985016-13985035 | None:intergenic | 50.0% | |
| ! | CAGCGCCATGTTCTAGTTGA+TGG | + | chr7_2:13985024-13985043 | Msa1050100:CDS | 50.0% |
| CCCATACCCATAAAACCAGC+AGG | - | chr7_2:13985075-13985094 | None:intergenic | 50.0% | |
| GATTCCGTCTCCACTCTGTA+AGG | + | chr7_2:13985341-13985360 | Msa1050100:CDS | 50.0% | |
| CATCCCTTACAGAGTGGAGA+CGG | - | chr7_2:13985348-13985367 | None:intergenic | 50.0% | |
| TGCAAAAGGTTGGAGAGGGA+GGG | - | chr7_2:13985498-13985517 | None:intergenic | 50.0% | |
| ACTCATGACCAGTAGCATCC+TGG | - | chr7_2:13985791-13985810 | None:intergenic | 50.0% | |
| TTGGCAAAGGGTCGAAACCT+TGG | + | chr7_2:13985841-13985860 | Msa1050100:CDS | 50.0% | |
| TGGCAAAGGGTCGAAACCTT+GGG | + | chr7_2:13985842-13985861 | Msa1050100:CDS | 50.0% | |
| TGACAGTCATTGAGGAGGCA+AGG | + | chr7_2:13985895-13985914 | Msa1050100:CDS | 50.0% | |
| TCATTGAGGAGGCAAGGAAG+CGG | + | chr7_2:13985901-13985920 | Msa1050100:CDS | 50.0% | |
| GTGTCTGTGTGCGAGAGTTG+TGG | - | chr7_2:13983414-13983433 | None:intergenic | 55.0% | |
| AACAGAAACGAACGGCGCAG+TGG | - | chr7_2:13983465-13983484 | None:intergenic | 55.0% | |
| AGCTTGGCGGTGCCTTTGTA+TGG | + | chr7_2:13984791-13984810 | Msa1050100:intron | 55.0% | |
| ! | TGGTCCAGATGACGGCTTTG+GGG | - | chr7_2:13984911-13984930 | None:intergenic | 55.0% |
| ! | GTGGTCCAGATGACGGCTTT+GGG | - | chr7_2:13984912-13984931 | None:intergenic | 55.0% |
| ! | TGTGGTCCAGATGACGGCTT+TGG | - | chr7_2:13984913-13984932 | None:intergenic | 55.0% |
| CTGCAAAAGGTTGGAGAGGG+AGG | - | chr7_2:13985499-13985518 | None:intergenic | 55.0% | |
| ! | GCGGATTGTACGCCCATCAT+AGG | - | chr7_2:13985583-13985602 | None:intergenic | 55.0% |
| TGGTGACTGGAGGAAGGAAC+AGG | + | chr7_2:13985703-13985722 | Msa1050100:CDS | 55.0% | |
| GGTGACTGGAGGAAGGAACA+GGG | + | chr7_2:13985704-13985723 | Msa1050100:CDS | 55.0% | |
| GTGACTGGAGGAAGGAACAG+GGG | + | chr7_2:13985705-13985724 | Msa1050100:CDS | 55.0% | |
| ! | CCTTTGGGAAGAGACACCCA+AGG | - | chr7_2:13985861-13985880 | None:intergenic | 55.0% |
| CCTTGGGTGTCTCTTCCCAA+AGG | + | chr7_2:13985858-13985877 | Msa1050100:CDS | 55.0% | |
| GTGTCTCTTCCCAAAGGCAG+AGG | + | chr7_2:13985864-13985883 | Msa1050100:CDS | 55.0% | |
| GATGGCTGCTTCTCAACAGG+TGG | + | chr7_2:13985923-13985942 | Msa1050100:CDS | 55.0% | |
| TGTGCGAGAGTTGTGGGAGG+TGG | - | chr7_2:13983407-13983426 | None:intergenic | 60.0% | |
| CTGTGTGCGAGAGTTGTGGG+AGG | - | chr7_2:13983410-13983429 | None:intergenic | 60.0% | |
| ! | GGCAATGTTGCCGCGCCTTT+TGG | - | chr7_2:13983444-13983463 | None:intergenic | 60.0% |
| GGAAGGAACAGGGGTCGTGT+TGG | + | chr7_2:13985714-13985733 | Msa1050100:CDS | 60.0% | |
| TGAGGAGGCAAGGAAGCGGA+TGG | + | chr7_2:13985905-13985924 | Msa1050100:CDS | 60.0% | |
| GCGGATGGCTGCTTCTCAAC+AGG | + | chr7_2:13985920-13985939 | Msa1050100:CDS | 60.0% | |
| CAGGCCCCAAAGCCGTCATC+TGG | + | chr7_2:13984904-13984923 | Msa1050100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 13983403 | 13986173 | 13983403 | ID=Msa1050100;Name=Msa1050100 |
| chr7_2 | mRNA | 13983403 | 13986173 | 13983403 | ID=Msa1050100-mRNA-1;Parent=Msa1050100;Name=Msa1050100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=96|1|1|1|1|1|5|217|265 |
| chr7_2 | exon | 13983403 | 13983501 | 13983403 | ID=Msa1050100-mRNA-1:exon:3406;Parent=Msa1050100-mRNA-1 |
| chr7_2 | exon | 13984730 | 13984807 | 13984730 | ID=Msa1050100-mRNA-1:exon:3407;Parent=Msa1050100-mRNA-1 |
| chr7_2 | exon | 13984907 | 13985087 | 13984907 | ID=Msa1050100-mRNA-1:exon:3408;Parent=Msa1050100-mRNA-1 |
| chr7_2 | exon | 13985281 | 13985378 | 13985281 | ID=Msa1050100-mRNA-1:exon:3409;Parent=Msa1050100-mRNA-1 |
| chr7_2 | exon | 13985519 | 13986173 | 13985519 | ID=Msa1050100-mRNA-1:exon:3410;Parent=Msa1050100-mRNA-1 |
| chr7_2 | five_prime_UTR | 13983403 | 13983498 | 13983403 | ID=Msa1050100-mRNA-1:five_prime_utr;Parent=Msa1050100-mRNA-1 |
| chr7_2 | CDS | 13983499 | 13983501 | 13983499 | ID=Msa1050100-mRNA-1:cds;Parent=Msa1050100-mRNA-1 |
| chr7_2 | CDS | 13984730 | 13984807 | 13984730 | ID=Msa1050100-mRNA-1:cds;Parent=Msa1050100-mRNA-1 |
| chr7_2 | CDS | 13984907 | 13985087 | 13984907 | ID=Msa1050100-mRNA-1:cds;Parent=Msa1050100-mRNA-1 |
| chr7_2 | CDS | 13985281 | 13985378 | 13985281 | ID=Msa1050100-mRNA-1:cds;Parent=Msa1050100-mRNA-1 |
| chr7_2 | CDS | 13985519 | 13985956 | 13985519 | ID=Msa1050100-mRNA-1:cds;Parent=Msa1050100-mRNA-1 |
| chr7_2 | three_prime_UTR | 13985957 | 13986173 | 13985957 | ID=Msa1050100-mRNA-1:three_prime_utr;Parent=Msa1050100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
