Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382960 | AES73712.2 | 92.690 | 342 | 8 | 3 | 1 | 339 | 20 | 347 | 0.0 | 634 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382960 | sp|B6IRQ7|RL4_RHOCS | 47.907 | 215 | 98 | 2 | 114 | 328 | 5 | 205 | 6.32e-58 | 189 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382960 | G7JBP6 | 92.690 | 342 | 8 | 3 | 1 | 339 | 20 | 347 | 0.0 | 634 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002430 | Msa0382960 | 0.807573 | 4.732854e-50 | -8.615850e-47 |
| Msa0087910 | Msa0382960 | 0.821075 | 4.895181e-53 | -8.615850e-47 |
| Msa0134580 | Msa0382960 | 0.817434 | 3.304161e-52 | -8.615850e-47 |
| Msa0191450 | Msa0382960 | 0.800494 | 1.403532e-48 | -8.615850e-47 |
| Msa0191550 | Msa0382960 | 0.813118 | 3.009111e-51 | -8.615850e-47 |
| Msa0194940 | Msa0382960 | 0.835771 | 1.382378e-56 | -8.615850e-47 |
| Msa0235050 | Msa0382960 | 0.801748 | 7.779338e-49 | -8.615850e-47 |
| Msa0382950 | Msa0382960 | 0.892139 | 2.090515e-74 | -8.615850e-47 |
| Msa0382960 | Msa0426090 | 0.809326 | 2.000034e-50 | -8.615850e-47 |
| Msa0382960 | Msa0426250 | 0.817389 | 3.382758e-52 | -8.615850e-47 |
| Msa0382960 | Msa0432750 | 0.885058 | 1.127388e-71 | -8.615850e-47 |
| Msa0382960 | Msa0472480 | 0.805714 | 1.168436e-49 | -8.615850e-47 |
| Msa0382960 | Msa0479980 | 0.889668 | 1.971347e-73 | -8.615850e-47 |
| Msa0382960 | Msa0547920 | 0.818467 | 1.930786e-52 | -8.615850e-47 |
| Msa0382960 | Msa0554210 | 0.810134 | 1.340537e-50 | -8.615850e-47 |
| Msa0382960 | Msa0602900 | 0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0382960 | Msa0643960 | 0.812571 | 3.964226e-51 | -8.615850e-47 |
| Msa0382960 | Msa0929700 | 0.816922 | 4.308469e-52 | -8.615850e-47 |
| Msa0382960 | Msa1054280 | 0.802998 | 4.298735e-49 | -8.615850e-47 |
| Msa0382960 | Msa1083370 | 0.812792 | 3.547574e-51 | -8.615850e-47 |
| Msa0382960 | Msa1116940 | 0.834061 | 3.725838e-56 | -8.615850e-47 |
| Msa0382960 | Msa1136880 | 0.809618 | 1.731063e-50 | -8.615850e-47 |
| Msa0382960 | Msa1257450 | 0.804183 | 2.441135e-49 | -8.615850e-47 |
| Msa0382960 | Msa1341780 | 0.805406 | 1.355433e-49 | -8.615850e-47 |
| Msa0382960 | Msa1371410 | 0.888296 | 6.694060e-73 | -8.615850e-47 |
| Msa0382960 | Msa1415620 | 0.886620 | 2.919096e-72 | -8.615850e-47 |
| Msa0281370 | Msa0382960 | 0.810816 | 9.551213e-51 | -8.615850e-47 |
| Msa0315430 | Msa0382960 | 0.829357 | 5.384804e-55 | -8.615850e-47 |
| Msa0340560 | Msa0382960 | 0.801531 | 8.616356e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382960 | MtrunA17_Chr3g0138321 | 92.971 | 313 | 6 | 2 | 30 | 339 | 1 | 300 | 0.0 | 588 |
| Msa0382960 | MtrunA17_Chr8g0335501 | 33.182 | 220 | 128 | 4 | 107 | 322 | 50 | 254 | 4.29e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0382960 | AT2G20060.1 | 64.890 | 319 | 77 | 5 | 30 | 333 | 1 | 299 | 9.99e-143 | 405 |
| Msa0382960 | AT1G07320.2 | 31.034 | 232 | 135 | 6 | 95 | 321 | 43 | 254 | 8.08e-18 | 82.8 |
| Msa0382960 | AT1G07320.1 | 31.034 | 232 | 135 | 6 | 95 | 321 | 43 | 254 | 8.31e-18 | 82.8 |
| Msa0382960 | AT1G07320.4 | 31.034 | 232 | 135 | 6 | 95 | 321 | 43 | 254 | 8.58e-18 | 82.4 |
| Msa0382960 | AT1G07320.3 | 31.034 | 232 | 135 | 6 | 95 | 321 | 43 | 254 | 8.58e-18 | 82.4 |
Find 88 sgRNAs with CRISPR-Local
Find 467 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTACCTCAACCATTTATT+TGG | 0.072403 | 3_1:+85747326 | None:intergenic |
| CAACGAAGACAAGGGCTTTA+TGG | 0.163918 | 3_1:-85752613 | Msa0382960:CDS |
| CCCAGTGCTGCTGGGTTATA+TGG | 0.172532 | 3_1:-85753535 | Msa0382960:CDS |
| TTATTTGGGTGTGGATTTAT+TGG | 0.194249 | 3_1:+85747341 | None:intergenic |
| GCTTCTAGTGTTTGAGGATT+TGG | 0.223422 | 3_1:-85748337 | Msa0382960:CDS |
| CAAGATTAAAACTTAGGATT+TGG | 0.270503 | 3_1:-85747152 | Msa0382960:three_prime_UTR |
| CTCAAATGGTTAAGTTGTTA+TGG | 0.283472 | 3_1:-85747112 | Msa0382960:three_prime_UTR |
| TAAATCCACACCCAAATAAA+TGG | 0.297256 | 3_1:-85747337 | Msa0382960:exon |
| AATTCTGTTCACAGCATCTT+TGG | 0.299153 | 3_1:+85747389 | None:intergenic |
| TTTGATTCACCCAGTGCTGC+TGG | 0.304551 | 3_1:-85753544 | Msa0382960:CDS |
| TTGCTCGACCAGTTCCCTTT+TGG | 0.310177 | 3_1:+85751579 | None:intergenic |
| ATCTACGATCAGAAGTTTCT+TGG | 0.323553 | 3_1:+85748257 | None:intergenic |
| ATAAGAAAGAAGTAGCCTTT+TGG | 0.327708 | 3_1:+85753588 | None:intergenic |
| TCGTTGTGAAAGTTGGTAAC+TGG | 0.350576 | 3_1:+85752630 | None:intergenic |
| GTAGGTTGATTCTTCAGTTA+TGG | 0.350673 | 3_1:-85753623 | Msa0382960:intron |
| CCAGTGCTGCTGGGTTATAT+GGG | 0.354877 | 3_1:-85753534 | Msa0382960:CDS |
| ATTAGTGAGGTCAGTGGGAC+TGG | 0.362388 | 3_1:-85751617 | Msa0382960:CDS |
| AACTTCATTTACTCAGGATT+AGG | 0.367891 | 3_1:-85747288 | Msa0382960:three_prime_UTR |
| CCCATATAACCCAGCAGCAC+TGG | 0.368405 | 3_1:+85753534 | None:intergenic |
| ACTTCTTTCTTATCAATCCT+TGG | 0.378210 | 3_1:-85753578 | Msa0382960:CDS |
| TATACAGCTTCTAGTGTTTG+AGG | 0.378850 | 3_1:-85748343 | Msa0382960:intron |
| GGTGTGGATTTATTGGAGAT+TGG | 0.392265 | 3_1:+85747348 | None:intergenic |
| ACTACCTCAACCATTTATTT+GGG | 0.392940 | 3_1:+85747327 | None:intergenic |
| GAGTTTGAAAGCGTGACTTC+GGG | 0.393295 | 3_1:+85751406 | None:intergenic |
| GCAACATCTGAGCGTGATAT+AGG | 0.405707 | 3_1:-85753312 | Msa0382960:intron |
| AAAGCGTGACTTCGGGGCTT+AGG | 0.410919 | 3_1:+85751413 | None:intergenic |
| CTCAAGCAAAATATTCTCAT+TGG | 0.412421 | 3_1:+85747226 | None:intergenic |
| TGGGTCATTGCGTGGGCCTC+AGG | 0.414756 | 3_1:-85751552 | Msa0382960:intron |
| TTGTTTCAAGATTAAAACTT+AGG | 0.418739 | 3_1:-85747158 | Msa0382960:three_prime_UTR |
| CATTTCTGCTCACCGTATCT+TGG | 0.423638 | 3_1:-85753503 | Msa0382960:intron |
| GGTTTCTGATAAAATTATAC+AGG | 0.430088 | 3_1:-85747204 | Msa0382960:three_prime_UTR |
| CAATAAGAAGGTTCGGCGAC+TGG | 0.432512 | 3_1:-85751384 | Msa0382960:CDS |
| CTCAACCATTTATTTGGGTG+TGG | 0.441163 | 3_1:+85747332 | None:intergenic |
| TTATGCTGCAGGGCTCTGTC+AGG | 0.442320 | 3_1:-85752664 | Msa0382960:intron |
| TATTGTGTCTCTTGCCAGCT+TGG | 0.442606 | 3_1:+85751124 | None:intergenic |
| GAGAAAGCCTTGGAACCAAA+AGG | 0.454529 | 3_1:-85751594 | Msa0382960:CDS |
| TCTAGTGTTTGAGGATTTGG+AGG | 0.457747 | 3_1:-85748334 | Msa0382960:CDS |
| GAAACAAACCTGTTGGTTCT+CGG | 0.461567 | 3_1:-85753881 | None:intergenic |
| TGAGTTTGAAAGCGTGACTT+CGG | 0.462197 | 3_1:+85751405 | None:intergenic |
| GCAGCGTGCAAAACGCCAAC+AGG | 0.466799 | 3_1:-85752526 | Msa0382960:intron |
| CTTGTCTTCGTTGTGAAAGT+TGG | 0.471718 | 3_1:+85752623 | None:intergenic |
| TCAAACTCAATAAGAAGGTT+CGG | 0.474336 | 3_1:-85751391 | Msa0382960:CDS |
| CGCTTTCAAACTCAATAAGA+AGG | 0.480982 | 3_1:-85751396 | Msa0382960:CDS |
| CAGTAGAAGTAGAAAAGCGT+TGG | 0.484013 | 3_1:+85753379 | None:intergenic |
| TGAACTATATCCTTCCGAAT+AGG | 0.487787 | 3_1:+85752564 | None:intergenic |
| TAATAGTTTACCAGCCAAGC+TGG | 0.490199 | 3_1:-85751138 | Msa0382960:intron |
| CCTTGGAACCAAAAGGGAAC+TGG | 0.491414 | 3_1:-85751587 | Msa0382960:CDS |
| TGGCTTCTTTCATCTCCAAA+AGG | 0.496230 | 3_1:-85753603 | Msa0382960:CDS |
| GCAAGGCATGGGTCATTGCG+TGG | 0.496788 | 3_1:-85751560 | Msa0382960:CDS |
| TTGATTCACCCAGTGCTGCT+GGG | 0.499368 | 3_1:-85753543 | Msa0382960:CDS |
| CAAGAGCTCCGAGAACCAAC+AGG | 0.505865 | 3_1:+85753873 | None:intergenic |
| GTACTAAACTTCATTTACTC+AGG | 0.508949 | 3_1:-85747294 | Msa0382960:three_prime_UTR |
| AAACTGATACTTACAATGGA+TGG | 0.519437 | 3_1:+85748171 | None:intergenic |
| CTGTCAGCTCGTGCAGCAGA+AGG | 0.521868 | 3_1:-85751347 | Msa0382960:CDS |
| CCATATAACCCAGCAGCACT+GGG | 0.532120 | 3_1:+85753535 | None:intergenic |
| ATTAAAACTTAGGATTTGGA+TGG | 0.533638 | 3_1:-85747148 | Msa0382960:three_prime_UTR |
| AATAAGAAGGTTCGGCGACT+GGG | 0.536871 | 3_1:-85751383 | Msa0382960:CDS |
| AAAGCGTTGGGTGATTGATC+CGG | 0.543562 | 3_1:+85753392 | None:intergenic |
| TTAGTGAGGTCAGTGGGACT+GGG | 0.544271 | 3_1:-85751616 | Msa0382960:CDS |
| GTGGGACTGGGAGAAAGCCT+TGG | 0.549232 | 3_1:-85751604 | Msa0382960:CDS |
| CAACTTTCACAACGAAGACA+AGG | 0.552359 | 3_1:-85752622 | Msa0382960:CDS |
| AGAAAGCCTTGGAACCAAAA+GGG | 0.558506 | 3_1:-85751593 | Msa0382960:CDS |
| GGAACTGGTCGAGCAAGGCA+TGG | 0.559028 | 3_1:-85751572 | Msa0382960:CDS |
| TTTCTTATCAATCCTTGGCA+CGG | 0.559499 | 3_1:-85753573 | Msa0382960:CDS |
| GAATGCAATGTACCAAGATA+CGG | 0.566350 | 3_1:+85753491 | None:intergenic |
| AGCTCGTGCAGCAGAAGGAA+AGG | 0.568393 | 3_1:-85751342 | Msa0382960:CDS |
| CAAGGCATGGGTCATTGCGT+GGG | 0.570939 | 3_1:-85751559 | Msa0382960:CDS |
| AGTAGAAGTAGAAAAGCGTT+GGG | 0.572426 | 3_1:+85753380 | None:intergenic |
| ATCAAAGCAGCGCCGTGCCA+AGG | 0.573221 | 3_1:+85753561 | None:intergenic |
| AAACTATTAGTGAGGTCAGT+GGG | 0.576745 | 3_1:-85751622 | Msa0382960:CDS |
| CACACCCAAATAAATGGTTG+AGG | 0.579840 | 3_1:-85747331 | Msa0382960:exon |
| CAGTGCTGCTGGGTTATATG+GGG | 0.586267 | 3_1:-85753533 | Msa0382960:CDS |
| GAACTGGTCGAGCAAGGCAT+GGG | 0.586611 | 3_1:-85751571 | Msa0382960:CDS |
| AAAAGGGAACTGGTCGAGCA+AGG | 0.599214 | 3_1:-85751577 | Msa0382960:CDS |
| ATCACTGTGTTACAGAAATG+AGG | 0.601606 | 3_1:+85747249 | None:intergenic |
| AAGAGAAGAGAACATAAATG+AGG | 0.610352 | 3_1:+85753830 | None:intergenic |
| GTGTTACAGAAATGAGGACA+TGG | 0.610594 | 3_1:+85747255 | None:intergenic |
| AACTTTCACAACGAAGACAA+GGG | 0.614854 | 3_1:-85752621 | Msa0382960:CDS |
| AATGAATGGCAACAGTTCAG+GGG | 0.626239 | 3_1:-85751455 | Msa0382960:intron |
| AGGGGTGGTGAAGCGAAGCA+TGG | 0.631679 | 3_1:-85751437 | Msa0382960:CDS |
| TGTTACAGAAATGAGGACAT+GGG | 0.643485 | 3_1:+85747256 | None:intergenic |
| CACGCTGCCACAAAACAACA+CGG | 0.652436 | 3_1:+85752541 | None:intergenic |
| AAACTTCTGATCGTAGATGA+CGG | 0.659438 | 3_1:-85748252 | Msa0382960:CDS |
| GAATGGCAACAGTTCAGGGG+TGG | 0.663853 | 3_1:-85751452 | Msa0382960:intron |
| GTTACAGAAATGAGGACATG+GGG | 0.672070 | 3_1:+85747257 | None:intergenic |
| AAAACTATTAGTGAGGTCAG+TGG | 0.674538 | 3_1:-85751623 | Msa0382960:CDS |
| AGTTTGAAAGCGTGACTTCG+GGG | 0.691763 | 3_1:+85751407 | None:intergenic |
| TCACGCTCAGATGTTGCGAG+AGG | 0.692190 | 3_1:+85753318 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTTTAAGAAAGA+AGG | + | chr3_1:85749696-85749715 | None:intergenic | 10.0% |
| !!! | TTTATAAATTTTCATTTAAC+AGG | + | chr3_1:85750744-85750763 | None:intergenic | 10.0% |
| !! | GTAATTTAAAAAATTATAGT+GGG | + | chr3_1:85751029-85751048 | None:intergenic | 10.0% |
| !!! | CACTATAATTTTTTAAATTA+CGG | - | chr3_1:85751028-85751047 | Msa0382960:intron | 10.0% |
| !! | AATTTCAAATAGAAAATTTA+TGG | + | chr3_1:85751078-85751097 | None:intergenic | 10.0% |
| !!! | TTTTATTATAGACAATTTAA+AGG | - | chr3_1:85751344-85751363 | Msa0382960:CDS | 10.0% |
| !!! | TTATTATTTTTCCATATTTT+GGG | + | chr3_1:85751866-85751885 | None:intergenic | 10.0% |
| !!! | ATTATTATTTTTCCATATTT+TGG | + | chr3_1:85751867-85751886 | None:intergenic | 10.0% |
| !! | TTATTTATTTAAATGTAGAC+CGG | - | chr3_1:85747567-85747586 | Msa0382960:intron | 15.0% |
| !! | ACTTAGATATAAATATCTTA+TGG | - | chr3_1:85747894-85747913 | Msa0382960:intron | 15.0% |
| !! | ACAGTTATATTGATATATAT+TGG | - | chr3_1:85747990-85748009 | Msa0382960:intron | 15.0% |
| !! | AAAACTTAGATTTGTATTTA+TGG | + | chr3_1:85748155-85748174 | None:intergenic | 15.0% |
| !! | ATCTAAGTATATTATTAATG+TGG | - | chr3_1:85748287-85748306 | Msa0382960:CDS | 15.0% |
| !! | TATGAATATGTGATTATAAA+CGG | - | chr3_1:85750004-85750023 | Msa0382960:intron | 15.0% |
| !!! | GGTATTATAATTTTTTTTTG+AGG | + | chr3_1:85750360-85750379 | None:intergenic | 15.0% |
| !! | TTACAAAAATAAACCAATAT+GGG | + | chr3_1:85750767-85750786 | None:intergenic | 15.0% |
| !! | ATTACAAAAATAAACCAATA+TGG | + | chr3_1:85750768-85750787 | None:intergenic | 15.0% |
| !! | CGTAATTTAAAAAATTATAG+TGG | + | chr3_1:85751030-85751049 | None:intergenic | 15.0% |
| !! | AATTGTCTATAATAAAAGTT+GGG | + | chr3_1:85751341-85751360 | None:intergenic | 15.0% |
| !! | AAATTGTCTATAATAAAAGT+TGG | + | chr3_1:85751342-85751361 | None:intergenic | 15.0% |
| !! | AATAACAAAAAGTTAGTTAT+AGG | - | chr3_1:85751394-85751413 | Msa0382960:CDS | 15.0% |
| !!! | ATTATCTTAGAATTTTGATT+GGG | + | chr3_1:85751565-85751584 | None:intergenic | 15.0% |
| !!! | TATTATCTTAGAATTTTGAT+TGG | + | chr3_1:85751566-85751585 | None:intergenic | 15.0% |
| !! | ATATGGAAAAATAATAATCT+AGG | - | chr3_1:85751869-85751888 | Msa0382960:intron | 15.0% |
| !!! | TATAATTTTACAGCAAAAAA+AGG | + | chr3_1:85751956-85751975 | None:intergenic | 15.0% |
| !! | AACTCATAAAATAAAGAAAA+AGG | - | chr3_1:85752352-85752371 | Msa0382960:intron | 15.0% |
| !! | ATTATATGTTAAATAAGAGT+CGG | - | chr3_1:85752576-85752595 | Msa0382960:CDS | 15.0% |
| !!! | TCTATATTTTGAAATACATT+TGG | + | chr3_1:85753049-85753068 | None:intergenic | 15.0% |
| !! | AAATTATGAATGAAAATATC+CGG | + | chr3_1:85753217-85753236 | None:intergenic | 15.0% |
| !!! | ATAAGATCAACAATATTTTA+AGG | + | chr3_1:85753321-85753340 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACATGTTTTTGT+AGG | - | chr3_1:85753521-85753540 | Msa0382960:CDS | 15.0% |
| !!! | TTTTTTAACATGTTTTTGTA+GGG | - | chr3_1:85753522-85753541 | Msa0382960:CDS | 15.0% |
| !! | AAAATAAATGAATGAGTGAA+GGG | + | chr3_1:85747307-85747326 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATTCAATTGT+AGG | - | chr3_1:85747337-85747356 | Msa0382960:exon | 20.0% |
| !! | GATATTTATATCTAAGTTAC+AGG | + | chr3_1:85747891-85747910 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAACATTGTCAA+AGG | + | chr3_1:85748185-85748204 | None:intergenic | 20.0% |
| !!! | TTTTGGACAATAAATAACTA+AGG | - | chr3_1:85748707-85748726 | Msa0382960:intron | 20.0% |
| !! | ATTGAAACATATACAATTCT+TGG | + | chr3_1:85748755-85748774 | None:intergenic | 20.0% |
| !! | AATTCTTTCATTTGTCAATT+AGG | + | chr3_1:85748862-85748881 | None:intergenic | 20.0% |
| !! | ATAGTCATAGGATATATAAA+GGG | + | chr3_1:85749175-85749194 | None:intergenic | 20.0% |
| !!! | AAACATATTGTTTCATGTTT+TGG | - | chr3_1:85749816-85749835 | Msa0382960:intron | 20.0% |
| !!! | ACAATATTCTTATTTCTTGT+AGG | - | chr3_1:85749871-85749890 | Msa0382960:intron | 20.0% |
| !! | ATGAATATGTGATTATAAAC+GGG | - | chr3_1:85750005-85750024 | Msa0382960:intron | 20.0% |
| !! | ATATACAAATTGCTTTAGTA+TGG | - | chr3_1:85750102-85750121 | Msa0382960:intron | 20.0% |
| !!! | TCTGAAAAATATTTTATGCA+GGG | - | chr3_1:85750169-85750188 | Msa0382960:intron | 20.0% |
| !! | AAATATTAAAGAAAGTAGCT+GGG | + | chr3_1:85750254-85750273 | None:intergenic | 20.0% |
| !! | AAAATATTAAAGAAAGTAGC+TGG | + | chr3_1:85750255-85750274 | None:intergenic | 20.0% |
| !! | ATAATTGTGATTCTTTCAAT+GGG | + | chr3_1:85750387-85750406 | None:intergenic | 20.0% |
| !! | AATAATTGTGATTCTTTCAA+TGG | + | chr3_1:85750388-85750407 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | + | chr3_1:85750493-85750512 | None:intergenic | 20.0% |
| !! | GAAAATTTATAAACCCATAT+TGG | - | chr3_1:85750751-85750770 | Msa0382960:intron | 20.0% |
| !!! | TTTGTAATTTTTCATGTGAA+AGG | - | chr3_1:85750780-85750799 | Msa0382960:intron | 20.0% |
| !!! | ATGTTTTTTCTTTTTGAAAC+TGG | - | chr3_1:85750894-85750913 | Msa0382960:intron | 20.0% |
| !! | TGTATTTGGTATTCAAATTA+CGG | - | chr3_1:85750981-85751000 | Msa0382960:intron | 20.0% |
| !!! | ATTTAAAAAATTATAGTGGG+TGG | + | chr3_1:85751026-85751045 | None:intergenic | 20.0% |
| !! | TAAATATTAAAAAAAGGACG+TGG | - | chr3_1:85751147-85751166 | Msa0382960:intron | 20.0% |
| !! | TATTATAGACAATTTAAAGG+CGG | - | chr3_1:85751347-85751366 | Msa0382960:CDS | 20.0% |
| !! | AATATATCAATGGTTATCAA+TGG | - | chr3_1:85751455-85751474 | Msa0382960:intron | 20.0% |
| !! | AATGAATGTCTGTTTATAAA+TGG | - | chr3_1:85751710-85751729 | Msa0382960:intron | 20.0% |
| !! | ATGAATGTCTGTTTATAAAT+GGG | - | chr3_1:85751711-85751730 | Msa0382960:intron | 20.0% |
| !! | AGATGTTAGAATATATCATA+TGG | - | chr3_1:85752146-85752165 | Msa0382960:intron | 20.0% |
| !! | TACAGTTAAACTAGTATAAA+TGG | + | chr3_1:85752195-85752214 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGGGATAATTA+TGG | + | chr3_1:85752522-85752541 | None:intergenic | 20.0% |
| !! | GTAAAAATTCAAAAAGTTCT+TGG | + | chr3_1:85752685-85752704 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTTACAATCAAC+TGG | - | chr3_1:85752692-85752711 | Msa0382960:intron | 20.0% |
| !!! | TAACTTTAGCTTTTCATTTA+CGG | + | chr3_1:85752754-85752773 | None:intergenic | 20.0% |
| !! | TGATTAAGAAAATAACTATG+AGG | + | chr3_1:85753089-85753108 | None:intergenic | 20.0% |
| !! | AATTATGAATGAAAATATCC+GGG | + | chr3_1:85753216-85753235 | None:intergenic | 20.0% |
| !! | AAAAATATATGTATGAGCAA+AGG | + | chr3_1:85753507-85753526 | None:intergenic | 20.0% |
| !! | TTGTTTCAAGATTAAAACTT+AGG | - | chr3_1:85753820-85753839 | Msa0382960:intron | 20.0% |
| ! | TTGTAAGCAACAAAAGTTAA+CGG | + | chr3_1:85747265-85747284 | None:intergenic | 25.0% |
| ! | CAAAATAAATGAATGAGTGA+AGG | + | chr3_1:85747308-85747327 | None:intergenic | 25.0% |
| ! | GACAAACTTTAGGTATAAAA+TGG | + | chr3_1:85747843-85747862 | None:intergenic | 25.0% |
| !! | TCTAAAATTGAAGGAATTTG+TGG | - | chr3_1:85747939-85747958 | Msa0382960:intron | 25.0% |
| ! | ATATATCAATATAACTGTCG+TGG | + | chr3_1:85747988-85748007 | None:intergenic | 25.0% |
| ! | CATTACCTAAAAAAAAAGGT+TGG | + | chr3_1:85748099-85748118 | None:intergenic | 25.0% |
| ! | GATGCATTACCTAAAAAAAA+AGG | + | chr3_1:85748103-85748122 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGATATGCCTATT+CGG | - | chr3_1:85748400-85748419 | Msa0382960:intron | 25.0% |
| !! | TGATATTTGTTACAGCTATA+TGG | + | chr3_1:85748560-85748579 | None:intergenic | 25.0% |
| ! | ATATAGCTGTAACAAATATC+AGG | - | chr3_1:85748559-85748578 | Msa0382960:intron | 25.0% |
| ! | AAAATGATTGAGTATTTCCA+CGG | + | chr3_1:85748602-85748621 | None:intergenic | 25.0% |
| !! | TTTATCATTTTGAATTGCTC+TGG | - | chr3_1:85748626-85748645 | Msa0382960:intron | 25.0% |
| ! | GACAATAAATAACTAAGGTT+TGG | - | chr3_1:85748712-85748731 | Msa0382960:intron | 25.0% |
| ! | TCTTTCACTTTACATATGAT+AGG | - | chr3_1:85748824-85748843 | Msa0382960:intron | 25.0% |
| ! | CTTTCACTTTACATATGATA+GGG | - | chr3_1:85748825-85748844 | Msa0382960:intron | 25.0% |
| ! | CCAGAATTTATTCTAATGTA+AGG | + | chr3_1:85748888-85748907 | None:intergenic | 25.0% |
| ! | CCTTACATTAGAATAAATTC+TGG | - | chr3_1:85748885-85748904 | Msa0382960:intron | 25.0% |
| !!! | TAGAATAAATTCTGGAATAC+TGG | - | chr3_1:85748893-85748912 | Msa0382960:intron | 25.0% |
| !!! | AGAATAAATTCTGGAATACT+GGG | - | chr3_1:85748894-85748913 | Msa0382960:intron | 25.0% |
| ! | ATAGGATATATAAAGGGAAA+AGG | + | chr3_1:85749169-85749188 | None:intergenic | 25.0% |
| ! | GATAGTCATAGGATATATAA+AGG | + | chr3_1:85749176-85749195 | None:intergenic | 25.0% |
| ! | TTCAACAAAAACTATTAGTG+AGG | - | chr3_1:85749348-85749367 | Msa0382960:intron | 25.0% |
| ! | TGAATATGTGATTATAAACG+GGG | - | chr3_1:85750006-85750025 | Msa0382960:intron | 25.0% |
| !! | TTTCTTTCTTTTAATGTAGC+AGG | + | chr3_1:85750145-85750164 | None:intergenic | 25.0% |
| !! | GTCTGAAAAATATTTTATGC+AGG | - | chr3_1:85750168-85750187 | Msa0382960:intron | 25.0% |
| !! | AATATTTTATGCAGGGATAA+TGG | - | chr3_1:85750176-85750195 | Msa0382960:intron | 25.0% |
| ! | AATATTAAAGAAAGTAGCTG+GGG | + | chr3_1:85750253-85750272 | None:intergenic | 25.0% |
| ! | TAATTGTGATTCTTTCAATG+GGG | + | chr3_1:85750386-85750405 | None:intergenic | 25.0% |
| !!! | AAATTGCGTTTTGATTTTAC+TGG | - | chr3_1:85750578-85750597 | Msa0382960:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | + | chr3_1:85750606-85750625 | None:intergenic | 25.0% |
| !!! | TCGTTATCTTCTGAAAATTT+TGG | - | chr3_1:85750867-85750886 | Msa0382960:intron | 25.0% |
| !!! | TTTTTGAAACTGGAAAAATC+TGG | - | chr3_1:85750904-85750923 | Msa0382960:intron | 25.0% |
| ! | ATTTATGTGACTTTGCTTAA+GGG | - | chr3_1:85750927-85750946 | Msa0382960:intron | 25.0% |
| ! | CTTGAATTTGATGTTGTATT+TGG | - | chr3_1:85750967-85750986 | Msa0382960:intron | 25.0% |
| !! | TTTTCCAGATCTGAATTTTT+AGG | - | chr3_1:85751217-85751236 | Msa0382960:intron | 25.0% |
| ! | TTGATGAAGACGAATAATAA+TGG | - | chr3_1:85751262-85751281 | Msa0382960:intron | 25.0% |
| ! | CTATAATAAAAGTTGGGAAT+GGG | + | chr3_1:85751335-85751354 | None:intergenic | 25.0% |
| ! | TCTATAATAAAAGTTGGGAA+TGG | + | chr3_1:85751336-85751355 | None:intergenic | 25.0% |
| ! | ATTATAGACAATTTAAAGGC+GGG | - | chr3_1:85751348-85751367 | Msa0382960:CDS | 25.0% |
| ! | ATTCATATATCATCCAATCT+GGG | + | chr3_1:85751693-85751712 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTCTTAGAATTT+GGG | + | chr3_1:85751785-85751804 | None:intergenic | 25.0% |
| ! | TATATATATATAACCGATGC+AGG | - | chr3_1:85752019-85752038 | Msa0382960:intron | 25.0% |
| !!! | CTATTTTGTCTCTAAAAATG+AGG | + | chr3_1:85752064-85752083 | None:intergenic | 25.0% |
| ! | AAACTAGTATAAATGGTTCT+AGG | + | chr3_1:85752188-85752207 | None:intergenic | 25.0% |
| !! | TTTTCCCTTGATTACAATTA+GGG | + | chr3_1:85752331-85752350 | None:intergenic | 25.0% |
| !! | TTTTTCCCTTGATTACAATT+AGG | + | chr3_1:85752332-85752351 | None:intergenic | 25.0% |
| !! | ATTGCAATAAGACGTTATTT+TGG | + | chr3_1:85752461-85752480 | None:intergenic | 25.0% |
| !! | CAATCGCAAAAAGTATAAAA+GGG | + | chr3_1:85752532-85752551 | None:intergenic | 25.0% |
| !! | ACAATCGCAAAAAGTATAAA+AGG | + | chr3_1:85752533-85752552 | None:intergenic | 25.0% |
| !!! | AACTTTAGCTTTTCATTTAC+GGG | + | chr3_1:85752753-85752772 | None:intergenic | 25.0% |
| ! | AAATCTTATAGAAGCAACAT+GGG | + | chr3_1:85752835-85752854 | None:intergenic | 25.0% |
| !! | TCTACTAGTAGATATCTTTT+AGG | - | chr3_1:85752878-85752897 | Msa0382960:intron | 25.0% |
| !! | CTACTAGTAGATATCTTTTA+GGG | - | chr3_1:85752879-85752898 | Msa0382960:intron | 25.0% |
| !! | GAAAATAACTATGAGGATTT+TGG | + | chr3_1:85753082-85753101 | None:intergenic | 25.0% |
| !! | TATTTTGTTGCATGATACTT+TGG | - | chr3_1:85753560-85753579 | Msa0382960:CDS | 25.0% |
| ! | GGTTTCTGATAAAATTATAC+AGG | - | chr3_1:85753774-85753793 | Msa0382960:intron | 25.0% |
| ! | CAAGATTAAAACTTAGGATT+TGG | - | chr3_1:85753826-85753845 | Msa0382960:CDS | 25.0% |
| ! | ATTAAAACTTAGGATTTGGA+TGG | - | chr3_1:85753830-85753849 | Msa0382960:CDS | 25.0% |
| !!! | GTGAAATTTTAATGCTCAAA+TGG | - | chr3_1:85753852-85753871 | Msa0382960:CDS | 25.0% |
| AAGAGAAGAGAACATAAATG+AGG | + | chr3_1:85747151-85747170 | None:intergenic | 30.0% | |
| GAAGAAGAAGAAAGAAAAAG+AGG | + | chr3_1:85747189-85747208 | None:intergenic | 30.0% | |
| ! | GAAATAAAAAACATGATGGG+GGG | + | chr3_1:85747222-85747241 | None:intergenic | 30.0% |
| GGAAATAAAAAACATGATGG+GGG | + | chr3_1:85747223-85747242 | None:intergenic | 30.0% | |
| CGGAAATAAAAAACATGATG+GGG | + | chr3_1:85747224-85747243 | None:intergenic | 30.0% | |
| GCGGAAATAAAAAACATGAT+GGG | + | chr3_1:85747225-85747244 | None:intergenic | 30.0% | |
| AGCGGAAATAAAAAACATGA+TGG | + | chr3_1:85747226-85747245 | None:intergenic | 30.0% | |
| ! | ATAAGAAAGAAGTAGCCTTT+TGG | + | chr3_1:85747393-85747412 | None:intergenic | 30.0% |
| ACTTCTTTCTTATCAATCCT+TGG | - | chr3_1:85747400-85747419 | Msa0382960:CDS | 30.0% | |
| ! | TTTTTGGACAATAAGTCAGA+TGG | + | chr3_1:85747639-85747658 | None:intergenic | 30.0% |
| ATTCATGTACTACAGAATGA+TGG | + | chr3_1:85747707-85747726 | None:intergenic | 30.0% | |
| AATGCATTGTAGATGATCAT+TGG | + | chr3_1:85747772-85747791 | None:intergenic | 30.0% | |
| ! | GTATTGATCGCATTATGATT+TGG | - | chr3_1:85748474-85748493 | Msa0382960:intron | 30.0% |
| AAGATTTATAGCATTTCCGT+TGG | + | chr3_1:85748524-85748543 | None:intergenic | 30.0% | |
| ACGGAAATGCTATAAATCTT+AGG | - | chr3_1:85748524-85748543 | Msa0382960:intron | 30.0% | |
| ! | GCAGACAAACATTTAGATTT+TGG | - | chr3_1:85748690-85748709 | Msa0382960:intron | 30.0% |
| AAGACAATGAGAAAATCAGA+GGG | + | chr3_1:85749009-85749028 | None:intergenic | 30.0% | |
| AAAGACAATGAGAAAATCAG+AGG | + | chr3_1:85749010-85749029 | None:intergenic | 30.0% | |
| TATATAAAGGGAAAAGGAAG+TGG | + | chr3_1:85749163-85749182 | None:intergenic | 30.0% | |
| ! | ATGCTATGATTGATAGTCAT+AGG | + | chr3_1:85749187-85749206 | None:intergenic | 30.0% |
| TCATAGCATCTAGTAATAAG+AGG | - | chr3_1:85749198-85749217 | Msa0382960:intron | 30.0% | |
| !! | GTGATCAACATATAATGGAT+TGG | - | chr3_1:85749222-85749241 | Msa0382960:intron | 30.0% |
| ! | TTAGCTATCAAATTTTCCTG+CGG | - | chr3_1:85749280-85749299 | Msa0382960:intron | 30.0% |
| ATTAATTACCACCACTGAAT+GGG | + | chr3_1:85749497-85749516 | None:intergenic | 30.0% | |
| TATTAATTACCACCACTGAA+TGG | + | chr3_1:85749498-85749517 | None:intergenic | 30.0% | |
| TCAAACTCAATAAGAAGGTT+CGG | - | chr3_1:85749587-85749606 | Msa0382960:intron | 30.0% | |
| TAAGAAAGAAGGCAATGATA+AGG | + | chr3_1:85749685-85749704 | None:intergenic | 30.0% | |
| TATGTAGTGTGAATTTACTC+TGG | - | chr3_1:85749908-85749927 | Msa0382960:intron | 30.0% | |
| !! | ATCTAGCTTTCAGCTAATAT+GGG | + | chr3_1:85750227-85750246 | None:intergenic | 30.0% |
| !! | TATCTAGCTTTCAGCTAATA+TGG | + | chr3_1:85750228-85750247 | None:intergenic | 30.0% |
| TTTATCTGTGAGAAAACCTT+AGG | - | chr3_1:85750273-85750292 | Msa0382960:intron | 30.0% | |
| AATTGTGATTCTTTCAATGG+GGG | + | chr3_1:85750385-85750404 | None:intergenic | 30.0% | |
| GAATAATCCAAATTGAAGAG+TGG | + | chr3_1:85750682-85750701 | None:intergenic | 30.0% | |
| AAGAAGAAAGATGAGATTCA+TGG | + | chr3_1:85750721-85750740 | None:intergenic | 30.0% | |
| GATTTATGTGACTTTGCTTA+AGG | - | chr3_1:85750926-85750945 | Msa0382960:intron | 30.0% | |
| TTTATGTGACTTTGCTTAAG+GGG | - | chr3_1:85750928-85750947 | Msa0382960:intron | 30.0% | |
| !! | TAAAAAATTATAGTGGGTGG+AGG | + | chr3_1:85751023-85751042 | None:intergenic | 30.0% |
| TCTTCCTAAAAATTCAGATC+TGG | + | chr3_1:85751224-85751243 | None:intergenic | 30.0% | |
| TTATAGACAATTTAAAGGCG+GGG | - | chr3_1:85751349-85751368 | Msa0382960:CDS | 30.0% | |
| TCAATGGATGAGAAAGTAAT+TGG | - | chr3_1:85751471-85751490 | Msa0382960:intron | 30.0% | |
| ATGAGAAAGTAATTGGTGTA+TGG | - | chr3_1:85751478-85751497 | Msa0382960:intron | 30.0% | |
| ! | ACAAATTTGTGTTTTGTGCA+TGG | - | chr3_1:85751504-85751523 | Msa0382960:intron | 30.0% |
| CATTCATATATCATCCAATC+TGG | + | chr3_1:85751694-85751713 | None:intergenic | 30.0% | |
| ! | CCTTACAAAACTAACTTGTA+AGG | + | chr3_1:85751747-85751766 | None:intergenic | 30.0% |
| !!! | CCTTACAAGTTAGTTTTGTA+AGG | - | chr3_1:85751744-85751763 | Msa0382960:intron | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | - | chr3_1:85751754-85751773 | Msa0382960:intron | 30.0% |
| ! | TGATTCTTAGAATTTGGGTT+GGG | + | chr3_1:85751780-85751799 | None:intergenic | 30.0% |
| TTGATTCTTAGAATTTGGGT+TGG | + | chr3_1:85751781-85751800 | None:intergenic | 30.0% | |
| !! | GCAAGTTGATTCTTAGAATT+TGG | + | chr3_1:85751786-85751805 | None:intergenic | 30.0% |
| TCCAAAGTATGGTCAATAAA+GGG | - | chr3_1:85752256-85752275 | Msa0382960:intron | 30.0% | |
| TACAATTAGGGTTACATACA+TGG | + | chr3_1:85752319-85752338 | None:intergenic | 30.0% | |
| TGTAACCCTAATTGTAATCA+AGG | - | chr3_1:85752323-85752342 | Msa0382960:intron | 30.0% | |
| GTAACCCTAATTGTAATCAA+GGG | - | chr3_1:85752324-85752343 | Msa0382960:intron | 30.0% | |
| ! | GAATTTTTACAATCAACTGG+AGG | - | chr3_1:85752695-85752714 | Msa0382960:intron | 30.0% |
| !!! | ACTTTAGCTTTTCATTTACG+GGG | + | chr3_1:85752752-85752771 | None:intergenic | 30.0% |
| AAACTGATACTTACAATGGA+TGG | + | chr3_1:85752810-85752829 | None:intergenic | 30.0% | |
| GGTAAAACTGATACTTACAA+TGG | + | chr3_1:85752814-85752833 | None:intergenic | 30.0% | |
| GAAATCTTATAGAAGCAACA+TGG | + | chr3_1:85752836-85752855 | None:intergenic | 30.0% | |
| TGCTTCTATAAGATTTCTCA+TGG | - | chr3_1:85752839-85752858 | Msa0382960:intron | 30.0% | |
| ! | ATAACTATGAGGATTTTGGA+GGG | + | chr3_1:85753078-85753097 | None:intergenic | 30.0% |
| ! | AATAACTATGAGGATTTTGG+AGG | + | chr3_1:85753079-85753098 | None:intergenic | 30.0% |
| TCACACTTACCAACTTATTT+AGG | - | chr3_1:85753145-85753164 | Msa0382960:intron | 30.0% | |
| !! | TCTCCATCATTTTTGTAAGA+TGG | - | chr3_1:85753433-85753452 | Msa0382960:intron | 30.0% |
| GATCCATCTTACAAAAATGA+TGG | + | chr3_1:85753439-85753458 | None:intergenic | 30.0% | |
| TTATTTGGGTGTGGATTTAT+TGG | + | chr3_1:85753640-85753659 | None:intergenic | 30.0% | |
| TAAATCCACACCCAAATAAA+TGG | - | chr3_1:85753641-85753660 | Msa0382960:intron | 30.0% | |
| ACTACCTCAACCATTTATTT+GGG | + | chr3_1:85753654-85753673 | None:intergenic | 30.0% | |
| TACTACCTCAACCATTTATT+TGG | + | chr3_1:85753655-85753674 | None:intergenic | 30.0% | |
| GTACTAAACTTCATTTACTC+AGG | - | chr3_1:85753684-85753703 | Msa0382960:intron | 30.0% | |
| AACTTCATTTACTCAGGATT+AGG | - | chr3_1:85753690-85753709 | Msa0382960:intron | 30.0% | |
| CTCAAGCAAAATATTCTCAT+TGG | + | chr3_1:85753755-85753774 | None:intergenic | 30.0% | |
| ! | CAATGAGAATATTTTGCTTG+AGG | - | chr3_1:85753753-85753772 | Msa0382960:intron | 30.0% |
| ! | CTCAAATGGTTAAGTTGTTA+TGG | - | chr3_1:85753866-85753885 | Msa0382960:CDS | 30.0% |
| !! | AAAAAGAGGTACCTAACTAG+CGG | + | chr3_1:85747175-85747194 | None:intergenic | 35.0% |
| !! | GTAGGTTGATTCTTCAGTTA+TGG | - | chr3_1:85747355-85747374 | Msa0382960:CDS | 35.0% |
| TTTCTTATCAATCCTTGGCA+CGG | - | chr3_1:85747405-85747424 | Msa0382960:CDS | 35.0% | |
| GAATGCAATGTACCAAGATA+CGG | + | chr3_1:85747490-85747509 | None:intergenic | 35.0% | |
| !! | AGTAGAAGTAGAAAAGCGTT+GGG | + | chr3_1:85747601-85747620 | None:intergenic | 35.0% |
| TCTGTAGTACATGAATATGC+TGG | - | chr3_1:85747711-85747730 | Msa0382960:intron | 35.0% | |
| TTGCATGAGATAAAGCAGAA+AGG | + | chr3_1:85747741-85747760 | None:intergenic | 35.0% | |
| CTTGAGTCTTGACAAACTTT+AGG | + | chr3_1:85747853-85747872 | None:intergenic | 35.0% | |
| !! | TGCTTCTGCTCTAAAATTGA+AGG | - | chr3_1:85747930-85747949 | Msa0382960:intron | 35.0% |
| !!! | GTGCTCCAACCTTTTTTTTT+AGG | - | chr3_1:85748091-85748110 | Msa0382960:intron | 35.0% |
| CTTTGTTCTCGTTCTTGAAA+AGG | + | chr3_1:85748129-85748148 | None:intergenic | 35.0% | |
| !! | AACTCATCTAGTCTTGATCA+TGG | - | chr3_1:85748238-85748257 | Msa0382960:CDS | 35.0% |
| !! | ACTCATCTAGTCTTGATCAT+GGG | - | chr3_1:85748239-85748258 | Msa0382960:CDS | 35.0% |
| AACTTTCACAACGAAGACAA+GGG | - | chr3_1:85748357-85748376 | Msa0382960:intron | 35.0% | |
| ! | TTTTGATATGCCTATTCGGA+AGG | - | chr3_1:85748404-85748423 | Msa0382960:intron | 35.0% |
| TGAACTATATCCTTCCGAAT+AGG | + | chr3_1:85748417-85748436 | None:intergenic | 35.0% | |
| ATAATGCGATCAATACCTGT+TGG | + | chr3_1:85748470-85748489 | None:intergenic | 35.0% | |
| ! | ATGATTTGGAACCATTGAAC+TGG | - | chr3_1:85748488-85748507 | Msa0382960:intron | 35.0% |
| ! | TGATTTGGAACCATTGAACT+GGG | - | chr3_1:85748489-85748508 | Msa0382960:intron | 35.0% |
| TGTATTCAATTGTTGAACCG+TGG | - | chr3_1:85748582-85748601 | Msa0382960:intron | 35.0% | |
| !!! | TCTCATTGATTTTTGCCAAC+AGG | - | chr3_1:85749318-85749337 | Msa0382960:intron | 35.0% |
| !!! | CTCATTGATTTTTGCCAACA+GGG | - | chr3_1:85749319-85749338 | Msa0382960:intron | 35.0% |
| AAAACTATTAGTGAGGTCAG+TGG | - | chr3_1:85749355-85749374 | Msa0382960:intron | 35.0% | |
| AAACTATTAGTGAGGTCAGT+GGG | - | chr3_1:85749356-85749375 | Msa0382960:intron | 35.0% | |
| TAAAGAATGTTCTGTACCTG+AGG | + | chr3_1:85749445-85749464 | None:intergenic | 35.0% | |
| AATGGGAGGAGGAATAAAAT+GGG | + | chr3_1:85749480-85749499 | None:intergenic | 35.0% | |
| TTAATGAATGGCAACAGTTC+AGG | - | chr3_1:85749521-85749540 | Msa0382960:intron | 35.0% | |
| TAATGAATGGCAACAGTTCA+GGG | - | chr3_1:85749522-85749541 | Msa0382960:intron | 35.0% | |
| CGCTTTCAAACTCAATAAGA+AGG | - | chr3_1:85749582-85749601 | Msa0382960:intron | 35.0% | |
| AATGATAAGGAGAGTGATAG+AGG | + | chr3_1:85749672-85749691 | None:intergenic | 35.0% | |
| CAATGTTAAGAGTCTCACAT+TGG | - | chr3_1:85749970-85749989 | Msa0382960:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | + | chr3_1:85750476-85750495 | None:intergenic | 35.0% | |
| TAATCCAAATTGAAGAGTGG+AGG | + | chr3_1:85750679-85750698 | None:intergenic | 35.0% | |
| AAGAAAGATGAGATTCATGG+TGG | + | chr3_1:85750718-85750737 | None:intergenic | 35.0% | |
| TGCTTAAGGGGTAATATGAA+TGG | - | chr3_1:85750940-85750959 | Msa0382960:intron | 35.0% | |
| GCAGATATGAACATTTCTTG+TGG | - | chr3_1:85751188-85751207 | Msa0382960:intron | 35.0% | |
| TAACCCAACTATACAAAACC+GGG | + | chr3_1:85751540-85751559 | None:intergenic | 35.0% | |
| CTAACCCAACTATACAAAAC+CGG | + | chr3_1:85751541-85751560 | None:intergenic | 35.0% | |
| ! | CAAAACTAACTTGTAAGGTG+AGG | + | chr3_1:85751742-85751761 | None:intergenic | 35.0% |
| CTCCAAAGTATGGTCAATAA+AGG | - | chr3_1:85752255-85752274 | Msa0382960:intron | 35.0% | |
| ACCCTTTATTGACCATACTT+TGG | + | chr3_1:85752260-85752279 | None:intergenic | 35.0% | |
| TCATTGAACTCAAAGAAAGC+CGG | + | chr3_1:85752410-85752429 | None:intergenic | 35.0% | |
| TATACAGCTTCTAGTGTTTG+AGG | - | chr3_1:85752635-85752654 | Msa0382960:CDS | 35.0% | |
| !!! | AAGTTCTTGGTTTTATGCGT+GGG | + | chr3_1:85752672-85752691 | None:intergenic | 35.0% |
| !!! | AAAGTTCTTGGTTTTATGCG+TGG | + | chr3_1:85752673-85752692 | None:intergenic | 35.0% |
| ATCTACGATCAGAAGTTTCT+TGG | + | chr3_1:85752724-85752743 | None:intergenic | 35.0% | |
| AAACTTCTGATCGTAGATGA+CGG | - | chr3_1:85752726-85752745 | Msa0382960:intron | 35.0% | |
| !! | TAACTATGAGGATTTTGGAG+GGG | + | chr3_1:85753077-85753096 | None:intergenic | 35.0% |
| GGAAACTCTCCTAAATAAGT+TGG | + | chr3_1:85753157-85753176 | None:intergenic | 35.0% | |
| TAGATTCTTCAGTCTGAGTT+TGG | - | chr3_1:85753351-85753370 | Msa0382960:CDS | 35.0% | |
| AATTCTGTTCACAGCATCTT+TGG | + | chr3_1:85753592-85753611 | None:intergenic | 35.0% | |
| TGTTACAGAAATGAGGACAT+GGG | + | chr3_1:85753725-85753744 | None:intergenic | 35.0% | |
| ATCACTGTGTTACAGAAATG+AGG | + | chr3_1:85753732-85753751 | None:intergenic | 35.0% | |
| GGCAATTTGAGCTTAACTAG+CGG | + | chr3_1:85747244-85747263 | None:intergenic | 40.0% | |
| TGGCTTCTTTCATCTCCAAA+AGG | - | chr3_1:85747375-85747394 | Msa0382960:CDS | 40.0% | |
| ! | CAGTAGAAGTAGAAAAGCGT+TGG | + | chr3_1:85747602-85747621 | None:intergenic | 40.0% |
| TGAGCGTGATATAGGTATGA+AGG | - | chr3_1:85747674-85747693 | Msa0382960:intron | 40.0% | |
| AATTGAAGGAATTTGTGGCC+AGG | - | chr3_1:85747944-85747963 | Msa0382960:intron | 40.0% | |
| ATTGAAGGAATTTGTGGCCA+GGG | - | chr3_1:85747945-85747964 | Msa0382960:intron | 40.0% | |
| AAGACCCAAAAGTTAAACCC+TGG | + | chr3_1:85747965-85747984 | None:intergenic | 40.0% | |
| AGATGAGTTGCCATGATAGA+TGG | + | chr3_1:85748227-85748246 | None:intergenic | 40.0% | |
| AATGTGGTTCATTATGCTGC+AGG | - | chr3_1:85748303-85748322 | Msa0382960:CDS | 40.0% | |
| ATGTGGTTCATTATGCTGCA+GGG | - | chr3_1:85748304-85748323 | Msa0382960:CDS | 40.0% | |
| !! | TCGTTGTGAAAGTTGGTAAC+TGG | + | chr3_1:85748351-85748370 | None:intergenic | 40.0% |
| CTTGTCTTCGTTGTGAAAGT+TGG | + | chr3_1:85748358-85748377 | None:intergenic | 40.0% | |
| CAACTTTCACAACGAAGACA+AGG | - | chr3_1:85748356-85748375 | Msa0382960:intron | 40.0% | |
| !!! | AAGGGCTTTATGGTTTTAGC+TGG | - | chr3_1:85748375-85748394 | Msa0382960:intron | 40.0% |
| !!! | TAGTTCACCGTGTTGTTTTG+TGG | - | chr3_1:85748430-85748449 | Msa0382960:intron | 40.0% |
| GATTACATGTCCCAGTTCAA+TGG | + | chr3_1:85748502-85748521 | None:intergenic | 40.0% | |
| AACTGGGACATGTAATCCAA+CGG | - | chr3_1:85748505-85748524 | Msa0382960:intron | 40.0% | |
| ! | AGAATTGTGTAGAGAGGCAT+CGG | + | chr3_1:85748965-85748984 | None:intergenic | 40.0% |
| ACAATGAGAAAATCAGAGGG+CGG | + | chr3_1:85749006-85749025 | None:intergenic | 40.0% | |
| TCCTTGATATGTGACAGCAA+GGG | + | chr3_1:85749063-85749082 | None:intergenic | 40.0% | |
| ATCCTTGATATGTGACAGCA+AGG | + | chr3_1:85749064-85749083 | None:intergenic | 40.0% | |
| GAGGCGTGATCAACATATAA+TGG | - | chr3_1:85749217-85749236 | Msa0382960:intron | 40.0% | |
| AAAACAAGTAACATAGCCGC+AGG | + | chr3_1:85749299-85749318 | None:intergenic | 40.0% | |
| TTGTTGAATGAGTTCCCTGT+TGG | + | chr3_1:85749336-85749355 | None:intergenic | 40.0% | |
| AGAAAGCCTTGGAACCAAAA+GGG | - | chr3_1:85749385-85749404 | Msa0382960:intron | 40.0% | |
| GAATGGGAGGAGGAATAAAA+TGG | + | chr3_1:85749481-85749500 | None:intergenic | 40.0% | |
| AATGAATGGCAACAGTTCAG+GGG | - | chr3_1:85749523-85749542 | Msa0382960:intron | 40.0% | |
| ! | TGAGTTTGAAAGCGTGACTT+CGG | + | chr3_1:85749576-85749595 | None:intergenic | 40.0% |
| TAATAGTTTACCAGCCAAGC+TGG | - | chr3_1:85749840-85749859 | Msa0382960:intron | 40.0% | |
| TTGTAAATGCCACCCAAAAC+CGG | + | chr3_1:85750051-85750070 | None:intergenic | 40.0% | |
| TAGCTTTCAGCTAATATGGG+AGG | + | chr3_1:85750224-85750243 | None:intergenic | 40.0% | |
| ! | ACCGAGCCTCTAAAAACTAT+GGG | - | chr3_1:85750334-85750353 | Msa0382960:intron | 40.0% |
| !! | TTGAGGCCCATAGTTTTTAG+AGG | + | chr3_1:85750343-85750362 | None:intergenic | 40.0% |
| !! | ATTTACCTAACGGTGTCGTT+TGG | + | chr3_1:85750466-85750485 | None:intergenic | 40.0% |
| TTCCTATGAAATAGGAGGCT+CGG | + | chr3_1:85750624-85750643 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | - | chr3_1:85750624-85750643 | Msa0382960:intron | 40.0% | |
| GTTTCAATAGCCTAAGGTCA+GGG | + | chr3_1:85750650-85750669 | None:intergenic | 40.0% | |
| ! | TCATGGTGGTAATGCATAAC+TGG | + | chr3_1:85750704-85750723 | None:intergenic | 40.0% |
| !!! | GGGGTCACTATTTTTGTTGT+TGG | - | chr3_1:85751368-85751387 | Msa0382960:CDS | 40.0% |
| CGACAGTTCAGATCAAAAGT+TGG | + | chr3_1:85751423-85751442 | None:intergenic | 40.0% | |
| AACCCAACTATACAAAACCG+GGG | + | chr3_1:85751539-85751558 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTATAGTTGGGTT+AGG | - | chr3_1:85751539-85751558 | Msa0382960:intron | 40.0% |
| ! | GATTGTGGAAACTTGATAGC+AGG | + | chr3_1:85751618-85751637 | None:intergenic | 40.0% |
| GCTATCAAGTTTCCACAATC+AGG | - | chr3_1:85751618-85751637 | Msa0382960:CDS | 40.0% | |
| ACGCTTCAGATGTGAATCTT+GGG | - | chr3_1:85751643-85751662 | Msa0382960:intron | 40.0% | |
| TTTAGAAGAACAGCCTGCAT+CGG | + | chr3_1:85752035-85752054 | None:intergenic | 40.0% | |
| ! | GTCTTCACAGAATTGCTGTT+CGG | - | chr3_1:85752092-85752111 | Msa0382960:intron | 40.0% |
| TGTTTGTGTACACTGATCTC+TGG | - | chr3_1:85752603-85752622 | Msa0382960:CDS | 40.0% | |
| GCTTCTAGTGTTTGAGGATT+TGG | - | chr3_1:85752641-85752660 | Msa0382960:CDS | 40.0% | |
| TCTAGTGTTTGAGGATTTGG+AGG | - | chr3_1:85752644-85752663 | Msa0382960:CDS | 40.0% | |
| !!! | TCTTTTAGGGTATGTTGCGA+TGG | - | chr3_1:85752892-85752911 | Msa0382960:intron | 40.0% |
| AAGTGTGAGAAGAACAATGG+AGG | + | chr3_1:85753133-85753152 | None:intergenic | 40.0% | |
| GGTAAGTGTGAGAAGAACAA+TGG | + | chr3_1:85753136-85753155 | None:intergenic | 40.0% | |
| TTTCCTCATCTTCTCCTCAA+AGG | - | chr3_1:85753172-85753191 | Msa0382960:intron | 40.0% | |
| TTCCTCATCTTCTCCTCAAA+GGG | - | chr3_1:85753173-85753192 | Msa0382960:intron | 40.0% | |
| AGTGAAGTTGAACAGTGAAG+CGG | + | chr3_1:85753297-85753316 | None:intergenic | 40.0% | |
| GGTGTGGATTTATTGGAGAT+TGG | + | chr3_1:85753633-85753652 | None:intergenic | 40.0% | |
| CTCAACCATTTATTTGGGTG+TGG | + | chr3_1:85753649-85753668 | None:intergenic | 40.0% | |
| CACACCCAAATAAATGGTTG+AGG | - | chr3_1:85753647-85753666 | Msa0382960:intron | 40.0% | |
| GTTACAGAAATGAGGACATG+GGG | + | chr3_1:85753724-85753743 | None:intergenic | 40.0% | |
| GTGTTACAGAAATGAGGACA+TGG | + | chr3_1:85753726-85753745 | None:intergenic | 40.0% | |
| CATTTCTGCTCACCGTATCT+TGG | - | chr3_1:85747475-85747494 | Msa0382960:intron | 45.0% | |
| !! | AAAGCGTTGGGTGATTGATC+CGG | + | chr3_1:85747589-85747608 | None:intergenic | 45.0% |
| ! | AGATGTTGCGAGAGGCTTTT+TGG | + | chr3_1:85747655-85747674 | None:intergenic | 45.0% |
| GCAACATCTGAGCGTGATAT+AGG | - | chr3_1:85747666-85747685 | Msa0382960:intron | 45.0% | |
| !! | TGTGGCCAGGGTTTAACTTT+TGG | - | chr3_1:85747957-85747976 | Msa0382960:intron | 45.0% |
| !! | GTGGCCAGGGTTTAACTTTT+GGG | - | chr3_1:85747958-85747977 | Msa0382960:intron | 45.0% |
| ! | TTGCCATGATAGATGGTGGT+AGG | + | chr3_1:85748220-85748239 | None:intergenic | 45.0% |
| TGAGTTGCCATGATAGATGG+TGG | + | chr3_1:85748224-85748243 | None:intergenic | 45.0% | |
| CAACGAAGACAAGGGCTTTA+TGG | - | chr3_1:85748365-85748384 | Msa0382960:intron | 45.0% | |
| AATTGTCTGTGAGGATGGAG+TGG | - | chr3_1:85748650-85748669 | Msa0382960:intron | 45.0% | |
| !! | GAATTGTGTAGAGAGGCATC+GGG | + | chr3_1:85748964-85748983 | None:intergenic | 45.0% |
| GCAGGTAGAATTGTGTAGAG+AGG | + | chr3_1:85748971-85748990 | None:intergenic | 45.0% | |
| ! | TCCCTTGCTGTCACATATCA+AGG | - | chr3_1:85749059-85749078 | Msa0382960:intron | 45.0% |
| TCAAGTGAGCAAGAGAAGTG+AGG | + | chr3_1:85749132-85749151 | None:intergenic | 45.0% | |
| GAGAAAGCCTTGGAACCAAA+AGG | - | chr3_1:85749384-85749403 | Msa0382960:intron | 45.0% | |
| TTATTCCTCCTCCCATTCAG+TGG | - | chr3_1:85749483-85749502 | Msa0382960:intron | 45.0% | |
| AATTACCACCACTGAATGGG+AGG | + | chr3_1:85749494-85749513 | None:intergenic | 45.0% | |
| ! | AGTTTGAAAGCGTGACTTCG+GGG | + | chr3_1:85749574-85749593 | None:intergenic | 45.0% |
| ! | GAGTTTGAAAGCGTGACTTC+GGG | + | chr3_1:85749575-85749594 | None:intergenic | 45.0% |
| AATAAGAAGGTTCGGCGACT+GGG | - | chr3_1:85749595-85749614 | Msa0382960:intron | 45.0% | |
| TATTGTGTCTCTTGCCAGCT+TGG | + | chr3_1:85749857-85749876 | None:intergenic | 45.0% | |
| ATAGTCCTCACCTTACAAGC+CGG | - | chr3_1:85750029-85750048 | Msa0382960:intron | 45.0% | |
| !! | TCACCTTACAAGCCGGTTTT+GGG | - | chr3_1:85750036-85750055 | Msa0382960:intron | 45.0% |
| CTGTGAGAAAACCTTAGGCA+AGG | - | chr3_1:85750278-85750297 | Msa0382960:intron | 45.0% | |
| ! | CACCGAGCCTCTAAAAACTA+TGG | - | chr3_1:85750333-85750352 | Msa0382960:intron | 45.0% |
| !! | GCCCATAGTTTTTAGAGGCT+CGG | + | chr3_1:85750338-85750357 | None:intergenic | 45.0% |
| GTGATTCTTTCAATGGGGGT+GGG | + | chr3_1:85750381-85750400 | None:intergenic | 45.0% | |
| TGTGATTCTTTCAATGGGGG+TGG | + | chr3_1:85750382-85750401 | None:intergenic | 45.0% | |
| GTAGGAAAGGGGAAAACGAA+TGG | + | chr3_1:85750426-85750445 | None:intergenic | 45.0% | |
| ACATTCCAAACGACACCGTT+AGG | - | chr3_1:85750458-85750477 | Msa0382960:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | - | chr3_1:85750619-85750638 | Msa0382960:intron | 45.0% | |
| GGTTTCAATAGCCTAAGGTC+AGG | + | chr3_1:85750651-85750670 | None:intergenic | 45.0% | |
| CGTGTGGTTTCAATAGCCTA+AGG | + | chr3_1:85750656-85750675 | None:intergenic | 45.0% | |
| AAAAGGACGTGGTACTGTTC+TGG | - | chr3_1:85751158-85751177 | Msa0382960:intron | 45.0% | |
| !! | CACCCCGGTTTTGTATAGTT+GGG | - | chr3_1:85751534-85751553 | Msa0382960:intron | 45.0% |
| TAGCCTATCCTAGAACCGTT+AGG | - | chr3_1:85751589-85751608 | Msa0382960:CDS | 45.0% | |
| ! | TGTGGAAACTTGATAGCAGG+TGG | + | chr3_1:85751615-85751634 | None:intergenic | 45.0% |
| CACGCTTCAGATGTGAATCT+TGG | - | chr3_1:85751642-85751661 | Msa0382960:intron | 45.0% | |
| CTCTTAACACACACACACTC+AGG | + | chr3_1:85751669-85751688 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCAGAT+TGG | - | chr3_1:85751677-85751696 | Msa0382960:intron | 45.0% | |
| CGAGTGAGTCTCCCAAAATA+TGG | - | chr3_1:85751852-85751871 | Msa0382960:intron | 45.0% | |
| GATGCAGGCTGTTCTTCTAA+AGG | - | chr3_1:85752034-85752053 | Msa0382960:intron | 45.0% | |
| ! | TCACAGAATTGCTGTTCGGT+AGG | - | chr3_1:85752096-85752115 | Msa0382960:intron | 45.0% |
| ! | CACAGAATTGCTGTTCGGTA+GGG | - | chr3_1:85752097-85752116 | Msa0382960:intron | 45.0% |
| TCGGTAGGGAGAATTGAAGT+AGG | - | chr3_1:85752111-85752130 | Msa0382960:intron | 45.0% | |
| TCTGGATGTGCATTTAGTGG+GGG | + | chr3_1:85752234-85752253 | None:intergenic | 45.0% | |
| CTCTGGATGTGCATTTAGTG+GGG | + | chr3_1:85752235-85752254 | None:intergenic | 45.0% | |
| ! | GCTCTGGATGTGCATTTAGT+GGG | + | chr3_1:85752236-85752255 | None:intergenic | 45.0% |
| !! | AGCTCTGGATGTGCATTTAG+TGG | + | chr3_1:85752237-85752256 | None:intergenic | 45.0% |
| ACATCCAGAGCTCCAAAGTA+TGG | - | chr3_1:85752245-85752264 | Msa0382960:intron | 45.0% | |
| !! | TTGACCATACTTTGGAGCTC+TGG | + | chr3_1:85752252-85752271 | None:intergenic | 45.0% |
| AACTCAAAGAAAGCCGGCAA+AGG | + | chr3_1:85752404-85752423 | None:intergenic | 45.0% | |
| ! | TTTAGGGTATGTTGCGATGG+AGG | - | chr3_1:85752895-85752914 | Msa0382960:intron | 45.0% |
| TTAGGGTATGTTGCGATGGA+GGG | - | chr3_1:85752896-85752915 | Msa0382960:intron | 45.0% | |
| ! | TATGTTGCGATGGAGGGTTT+TGG | - | chr3_1:85752902-85752921 | Msa0382960:intron | 45.0% |
| ! | AGAACAATGGAGGCTCTAGT+GGG | + | chr3_1:85753123-85753142 | None:intergenic | 45.0% |
| ! | AAGAACAATGGAGGCTCTAG+TGG | + | chr3_1:85753124-85753143 | None:intergenic | 45.0% |
| AGTTGAAGTGACACCCTTTG+AGG | + | chr3_1:85753189-85753208 | None:intergenic | 45.0% | |
| !! | GTGTCACTTCAACTTTCTCC+CGG | - | chr3_1:85753195-85753214 | Msa0382960:intron | 45.0% |
| !! | ATTTAAATAAATAAAACAAA+CGG | + | chr3_1:85747561-85747580 | None:intergenic | 5.0% |
| !! | TAATTAATAAATTTAATGAA+TGG | - | chr3_1:85749509-85749528 | Msa0382960:intron | 5.0% |
| !! | TAATTGTAAATATTAAAAAA+AGG | - | chr3_1:85751141-85751160 | Msa0382960:intron | 5.0% |
| !! | ATATAATAATAATATATCAA+TGG | - | chr3_1:85751445-85751464 | Msa0382960:intron | 5.0% |
| CTCTTCTCTTGCCGCTAGTT+AGG | - | chr3_1:85747161-85747180 | Msa0382960:three_prime_UTR | 50.0% | |
| TTTGATTCACCCAGTGCTGC+TGG | - | chr3_1:85747434-85747453 | Msa0382960:CDS | 50.0% | |
| ! | TTGATTCACCCAGTGCTGCT+GGG | - | chr3_1:85747435-85747454 | Msa0382960:CDS | 50.0% |
| CCATATAACCCAGCAGCACT+GGG | + | chr3_1:85747446-85747465 | None:intergenic | 50.0% | |
| ! | CCAGTGCTGCTGGGTTATAT+GGG | - | chr3_1:85747444-85747463 | Msa0382960:intron | 50.0% |
| ! | CAGTGCTGCTGGGTTATATG+GGG | - | chr3_1:85747445-85747464 | Msa0382960:intron | 50.0% |
| CTGCCTACCACCATCTATCA+TGG | - | chr3_1:85748214-85748233 | Msa0382960:CDS | 50.0% | |
| CACGCTGCCACAAAACAACA+CGG | + | chr3_1:85748440-85748459 | None:intergenic | 50.0% | |
| TGCTCTGGCAATTGTCTGTG+AGG | - | chr3_1:85748641-85748660 | Msa0382960:intron | 50.0% | |
| CTGGCAATTGTCTGTGAGGA+TGG | - | chr3_1:85748645-85748664 | Msa0382960:intron | 50.0% | |
| TGTGAGGATGGAGTGGAGTA+GGG | - | chr3_1:85748657-85748676 | Msa0382960:intron | 50.0% | |
| ACAGCAAGGGAAGAAGAGTG+AGG | + | chr3_1:85749050-85749069 | None:intergenic | 50.0% | |
| ATTAGTGAGGTCAGTGGGAC+TGG | - | chr3_1:85749361-85749380 | Msa0382960:intron | 50.0% | |
| TTAGTGAGGTCAGTGGGACT+GGG | - | chr3_1:85749362-85749381 | Msa0382960:intron | 50.0% | |
| !!! | CCAGTTCCCTTTTGGTTCCA+AGG | + | chr3_1:85749394-85749413 | None:intergenic | 50.0% |
| CCTTGGAACCAAAAGGGAAC+TGG | - | chr3_1:85749391-85749410 | Msa0382960:intron | 50.0% | |
| ! | TTGCTCGACCAGTTCCCTTT+TGG | + | chr3_1:85749402-85749421 | None:intergenic | 50.0% |
| AAAAGGGAACTGGTCGAGCA+AGG | - | chr3_1:85749401-85749420 | Msa0382960:intron | 50.0% | |
| GGAGGAGGAATAAAATGGGC+TGG | + | chr3_1:85749476-85749495 | None:intergenic | 50.0% | |
| CAATAAGAAGGTTCGGCGAC+TGG | - | chr3_1:85749594-85749613 | Msa0382960:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr3_1:85750037-85750056 | None:intergenic | 50.0% |
| !! | CTCACCTTACAAGCCGGTTT+TGG | - | chr3_1:85750035-85750054 | Msa0382960:intron | 50.0% |
| GAGAAAACCTTAGGCAAGGC+CGG | - | chr3_1:85750282-85750301 | Msa0382960:intron | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | - | chr3_1:85750431-85750450 | Msa0382960:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | + | chr3_1:85750437-85750456 | None:intergenic | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | + | chr3_1:85750438-85750457 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | + | chr3_1:85750439-85750458 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | + | chr3_1:85750444-85750463 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | + | chr3_1:85750629-85750648 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | + | chr3_1:85750632-85750651 | None:intergenic | 50.0% | |
| ! | AATTGAAGAGTGGAGGCGTG+TGG | + | chr3_1:85750672-85750691 | None:intergenic | 50.0% |
| CACGCCTCCACTCTTCAATT+TGG | - | chr3_1:85750672-85750691 | Msa0382960:intron | 50.0% | |
| CCAACTATACAAAACCGGGG+TGG | + | chr3_1:85751536-85751555 | None:intergenic | 50.0% | |
| !! | CCACCCCGGTTTTGTATAGT+TGG | - | chr3_1:85751533-85751552 | Msa0382960:intron | 50.0% |
| !! | TGGCCTAACGGTTCTAGGAT+AGG | + | chr3_1:85751595-85751614 | None:intergenic | 50.0% |
| ! | CTTGATAGCAGGTGGCCTAA+CGG | + | chr3_1:85751607-85751626 | None:intergenic | 50.0% |
| ! | TCTGAAGCGTGACCTGATTG+TGG | + | chr3_1:85751633-85751652 | None:intergenic | 50.0% |
| AAAGGACAGCTGATGCAGTG+CGG | + | chr3_1:85752386-85752405 | None:intergenic | 50.0% | |
| ! | CACCCTTTGAGGAGAAGATG+AGG | + | chr3_1:85753178-85753197 | None:intergenic | 50.0% |
| TTGAACAGTGAAGCGGCGAT+AGG | + | chr3_1:85753290-85753309 | None:intergenic | 50.0% | |
| ! | CCCAGTGCTGCTGGGTTATA+TGG | - | chr3_1:85747443-85747462 | Msa0382960:intron | 55.0% |
| CCCATATAACCCAGCAGCAC+TGG | + | chr3_1:85747447-85747466 | None:intergenic | 55.0% | |
| TCACGCTCAGATGTTGCGAG+AGG | + | chr3_1:85747663-85747682 | None:intergenic | 55.0% | |
| TTATGCTGCAGGGCTCTGTC+AGG | - | chr3_1:85748314-85748333 | Msa0382960:CDS | 55.0% | |
| CTGTGAGGATGGAGTGGAGT+AGG | - | chr3_1:85748656-85748675 | Msa0382960:intron | 55.0% | |
| GTGAGGATGGAGTGGAGTAG+GGG | - | chr3_1:85748658-85748677 | Msa0382960:intron | 55.0% | |
| TGAGGATGGAGTGGAGTAGG+GGG | - | chr3_1:85748659-85748678 | Msa0382960:intron | 55.0% | |
| ATGGAGTGGAGTAGGGGGTT+GGG | - | chr3_1:85748664-85748683 | Msa0382960:intron | 55.0% | |
| !! | GTGTAGAGAGGCATCGGGTA+GGG | + | chr3_1:85748959-85748978 | None:intergenic | 55.0% |
| !! | TGTGTAGAGAGGCATCGGGT+AGG | + | chr3_1:85748960-85748979 | None:intergenic | 55.0% |
| GAACTGGTCGAGCAAGGCAT+GGG | - | chr3_1:85749407-85749426 | Msa0382960:intron | 55.0% | |
| CAAGGCATGGGTCATTGCGT+GGG | - | chr3_1:85749419-85749438 | Msa0382960:intron | 55.0% | |
| TTCCTCCTCCCATTCAGTGG+TGG | - | chr3_1:85749486-85749505 | Msa0382960:intron | 55.0% | |
| TACCACCACTGAATGGGAGG+AGG | + | chr3_1:85749491-85749510 | None:intergenic | 55.0% | |
| GAATGGCAACAGTTCAGGGG+TGG | - | chr3_1:85749526-85749545 | Msa0382960:intron | 55.0% | |
| AAAGCGTGACTTCGGGGCTT+AGG | + | chr3_1:85749568-85749587 | None:intergenic | 55.0% | |
| AGCTCGTGCAGCAGAAGGAA+AGG | - | chr3_1:85749636-85749655 | Msa0382960:intron | 55.0% | |
| !! | CCACCCAAAACCGGCTTGTA+AGG | + | chr3_1:85750042-85750061 | None:intergenic | 55.0% |
| !!! | CCTTACAAGCCGGTTTTGGG+TGG | - | chr3_1:85750039-85750058 | Msa0382960:intron | 55.0% |
| TTCTTGCACTCCCCAAGGTC+CGG | + | chr3_1:85750304-85750323 | None:intergenic | 55.0% | |
| ATAGGAACGGCCCTGACCTT+AGG | - | chr3_1:85750637-85750656 | Msa0382960:intron | 55.0% | |
| AGGACGTGGTACTGTTCTGG+TGG | - | chr3_1:85751161-85751180 | Msa0382960:intron | 55.0% | |
| GTGCATGGTAAATGCCACCC+CGG | - | chr3_1:85751519-85751538 | Msa0382960:intron | 55.0% | |
| AAGGACAGCTGATGCAGTGC+GGG | + | chr3_1:85752385-85752404 | None:intergenic | 55.0% | |
| CTGCATCAGCTGTCCTTTGC+CGG | - | chr3_1:85752388-85752407 | Msa0382960:intron | 55.0% | |
| !! | GTTGCGATGGAGGGTTTTGG+CGG | - | chr3_1:85752905-85752924 | Msa0382960:intron | 55.0% |
| !! | TTGCGATGGAGGGTTTTGGC+GGG | - | chr3_1:85752906-85752925 | Msa0382960:intron | 55.0% |
| ! | GGAGGCTCTAGTGGGAAAAG+TGG | + | chr3_1:85753115-85753134 | None:intergenic | 55.0% |
| ATCAAAGCAGCGCCGTGCCA+AGG | + | chr3_1:85747420-85747439 | None:intergenic | 60.0% | |
| GCAGCGTGCAAAACGCCAAC+AGG | - | chr3_1:85748452-85748471 | Msa0382960:intron | 60.0% | |
| GATGGAGTGGAGTAGGGGGT+TGG | - | chr3_1:85748663-85748682 | Msa0382960:intron | 60.0% | |
| !! | AGAGAGGCATCGGGTAGGGT+TGG | + | chr3_1:85748955-85748974 | None:intergenic | 60.0% |
| CAGAGGGCGGAAAAGACGCA+AGG | + | chr3_1:85748993-85749012 | None:intergenic | 60.0% | |
| GTGGGACTGGGAGAAAGCCT+TGG | - | chr3_1:85749374-85749393 | Msa0382960:intron | 60.0% | |
| GGAACTGGTCGAGCAAGGCA+TGG | - | chr3_1:85749406-85749425 | Msa0382960:intron | 60.0% | |
| GCAAGGCATGGGTCATTGCG+TGG | - | chr3_1:85749418-85749437 | Msa0382960:intron | 60.0% | |
| AGGGGTGGTGAAGCGAAGCA+TGG | - | chr3_1:85749541-85749560 | Msa0382960:intron | 60.0% | |
| CTGTCAGCTCGTGCAGCAGA+AGG | - | chr3_1:85749631-85749650 | Msa0382960:intron | 60.0% | |
| GTGTCTCTTGCCAGCTTGGC+TGG | + | chr3_1:85749853-85749872 | None:intergenic | 60.0% | |
| CTTAGGCAAGGCCGGACCTT+GGG | - | chr3_1:85750290-85750309 | Msa0382960:intron | 60.0% | |
| TTAGGCAAGGCCGGACCTTG+GGG | - | chr3_1:85750291-85750310 | Msa0382960:intron | 60.0% | |
| AGCGCTTCTTGCACTCCCCA+AGG | + | chr3_1:85750309-85750328 | None:intergenic | 60.0% | |
| GCAGGTGGCCTAACGGTTCT+AGG | + | chr3_1:85751600-85751619 | None:intergenic | 60.0% | |
| !! | TGCGATGGAGGGTTTTGGCG+GGG | - | chr3_1:85752907-85752926 | Msa0382960:intron | 60.0% |
| GGGCGGAAAAGACGCAAGGC+AGG | + | chr3_1:85748989-85749008 | None:intergenic | 65.0% | |
| TGGGTCATTGCGTGGGCCTC+AGG | - | chr3_1:85749426-85749445 | Msa0382960:intron | 65.0% | |
| CCAAGGTCCGGCCTTGCCTA+AGG | + | chr3_1:85750292-85750311 | None:intergenic | 65.0% | |
| CCTTAGGCAAGGCCGGACCT+TGG | - | chr3_1:85750289-85750308 | Msa0382960:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 85747106 | 85753894 | 85747106 | ID=Msa0382960;Name=Msa0382960 |
| chr3_1 | mRNA | 85747106 | 85753894 | 85747106 | ID=Msa0382960-mRNA-1;Parent=Msa0382960;Name=Msa0382960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.62|0.66|0.88|0.62|0.55|9|235|339 |
| chr3_1 | exon | 85747106 | 85747457 | 85747106 | ID=Msa0382960-mRNA-1:exon:22595;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85748185 | 85748358 | 85748185 | ID=Msa0382960-mRNA-1:exon:22594;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85751112 | 85751146 | 85751112 | ID=Msa0382960-mRNA-1:exon:22593;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85751339 | 85751462 | 85751339 | ID=Msa0382960-mRNA-1:exon:22592;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85751553 | 85751660 | 85751553 | ID=Msa0382960-mRNA-1:exon:22591;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85752527 | 85752675 | 85752527 | ID=Msa0382960-mRNA-1:exon:22590;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85753313 | 85753415 | 85753313 | ID=Msa0382960-mRNA-1:exon:22589;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85753504 | 85753641 | 85753504 | ID=Msa0382960-mRNA-1:exon:22588;Parent=Msa0382960-mRNA-1 |
| chr3_1 | exon | 85753823 | 85753894 | 85753823 | ID=Msa0382960-mRNA-1:exon:22587;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85753823 | 85753894 | 85753823 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85753504 | 85753641 | 85753504 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85753313 | 85753415 | 85753313 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85752527 | 85752675 | 85752527 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85751553 | 85751660 | 85751553 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85751339 | 85751462 | 85751339 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85751112 | 85751146 | 85751112 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85748185 | 85748358 | 85748185 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | CDS | 85747341 | 85747457 | 85747341 | ID=Msa0382960-mRNA-1:cds;Parent=Msa0382960-mRNA-1 |
| chr3_1 | three_prime_UTR | 85747106 | 85747340 | 85747106 | ID=Msa0382960-mRNA-1:three_prime_utr;Parent=Msa0382960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
