Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371410 | AES73712.2 | 97.333 | 300 | 5 | 1 | 1 | 297 | 48 | 347 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371410 | sp|B6IRQ7|RL4_RHOCS | 50.990 | 202 | 98 | 1 | 85 | 286 | 5 | 205 | 2.54e-62 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371410 | G7JBP6 | 97.333 | 300 | 5 | 1 | 1 | 297 | 48 | 347 | 0.0 | 598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040220 | Msa1371410 | 0.841290 | 5.199120e-58 | -8.615850e-47 |
| Msa0047650 | Msa1371410 | 0.812428 | 4.261285e-51 | -8.615850e-47 |
| Msa0087910 | Msa1371410 | 0.837048 | 6.541756e-57 | -8.615850e-47 |
| Msa0114600 | Msa1371410 | 0.823166 | 1.603346e-53 | -8.615850e-47 |
| Msa1353300 | Msa1371410 | 0.812356 | 4.417958e-51 | -8.615850e-47 |
| Msa1367540 | Msa1371410 | 0.811807 | 5.820289e-51 | -8.615850e-47 |
| Msa1371410 | Msa1385480 | 0.825336 | 4.955462e-54 | -8.615850e-47 |
| Msa1371410 | Msa1415620 | 0.995649 | 2.029136e-218 | -8.615850e-47 |
| Msa1371410 | Msa1424570 | 0.811799 | 5.842374e-51 | -8.615850e-47 |
| Msa1371410 | Msa1450560 | 0.843569 | 1.292586e-58 | -8.615850e-47 |
| Msa1371410 | Msa1463570 | 0.813767 | 2.167017e-51 | -8.615850e-47 |
| Msa1371410 | Msa1465700 | 0.834423 | 3.023373e-56 | -8.615850e-47 |
| Msa0602900 | Msa1371410 | 0.847631 | 1.023483e-59 | -8.615850e-47 |
| Msa0605890 | Msa1371410 | 0.813657 | 2.290800e-51 | -8.615850e-47 |
| Msa0643960 | Msa1371410 | 0.852562 | 4.256411e-61 | -8.615850e-47 |
| Msa0648620 | Msa1371410 | 0.826490 | 2.636955e-54 | -8.615850e-47 |
| Msa0648670 | Msa1371410 | 0.836659 | 8.222599e-57 | -8.615850e-47 |
| Msa0663400 | Msa1371410 | 0.800921 | 1.148451e-48 | -8.615850e-47 |
| Msa0694400 | Msa1371410 | 0.821854 | 3.236285e-53 | -8.615850e-47 |
| Msa0708630 | Msa1371410 | 0.826937 | 2.062409e-54 | -8.615850e-47 |
| Msa0748350 | Msa1371410 | 0.825690 | 4.085544e-54 | -8.615850e-47 |
| Msa0790450 | Msa1371410 | 0.841403 | 4.853996e-58 | -8.615850e-47 |
| Msa0128330 | Msa1371410 | 0.814576 | 1.435706e-51 | -8.615850e-47 |
| Msa0132460 | Msa1371410 | 0.826544 | 2.559714e-54 | -8.615850e-47 |
| Msa0134580 | Msa1371410 | 0.855616 | 5.598656e-62 | -8.615850e-47 |
| Msa0167860 | Msa1371410 | 0.815888 | 7.340616e-52 | -8.615850e-47 |
| Msa0174580 | Msa1371410 | 0.809090 | 2.246553e-50 | -8.615850e-47 |
| Msa0182050 | Msa1371410 | 0.828632 | 8.070651e-55 | -8.615850e-47 |
| Msa0182100 | Msa1371410 | 0.821474 | 3.959958e-53 | -8.615850e-47 |
| Msa0188740 | Msa1371410 | 0.813240 | 2.828959e-51 | -8.615850e-47 |
| Msa0192300 | Msa1371410 | 0.815127 | 1.084051e-51 | -8.615850e-47 |
| Msa0192490 | Msa1371410 | 0.826383 | 2.796482e-54 | -8.615850e-47 |
| Msa0194940 | Msa1371410 | 0.834209 | 3.421429e-56 | -8.615850e-47 |
| Msa0223240 | Msa1371410 | 0.812653 | 3.804109e-51 | -8.615850e-47 |
| Msa0234850 | Msa1371410 | 0.816331 | 5.843803e-52 | -8.615850e-47 |
| Msa1235950 | Msa1371410 | 0.834761 | 2.486877e-56 | -8.615850e-47 |
| Msa1235980 | Msa1371410 | 0.840630 | 7.747206e-58 | -8.615850e-47 |
| Msa1237040 | Msa1371410 | 0.838857 | 2.241114e-57 | -8.615850e-47 |
| Msa1258540 | Msa1371410 | 0.829307 | 5.538610e-55 | -8.615850e-47 |
| Msa1284060 | Msa1371410 | 0.822471 | 2.327688e-53 | -8.615850e-47 |
| Msa1317390 | Msa1371410 | 0.815112 | 1.092460e-51 | -8.615850e-47 |
| Msa1333370 | Msa1371410 | 0.851258 | 9.976966e-61 | -8.615850e-47 |
| Msa1341780 | Msa1371410 | 0.886785 | 2.527844e-72 | -8.615850e-47 |
| Msa0371490 | Msa1371410 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
| Msa0382950 | Msa1371410 | 0.911749 | 4.275902e-83 | -8.615850e-47 |
| Msa0382960 | Msa1371410 | 0.888296 | 6.694060e-73 | -8.615850e-47 |
| Msa0426090 | Msa1371410 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa0426250 | Msa1371410 | 0.835380 | 1.735435e-56 | -8.615850e-47 |
| Msa0432750 | Msa1371410 | 0.993728 | 8.635121e-202 | -8.615850e-47 |
| Msa0472480 | Msa1371410 | 0.812015 | 5.244243e-51 | -8.615850e-47 |
| Msa0475810 | Msa1371410 | 0.815525 | 8.842278e-52 | -8.615850e-47 |
| Msa0479980 | Msa1371410 | 0.994068 | 2.523554e-204 | -8.615850e-47 |
| Msa0481520 | Msa1371410 | 0.803821 | 2.903549e-49 | -8.615850e-47 |
| Msa1025200 | Msa1371410 | 0.835142 | 1.992740e-56 | -8.615850e-47 |
| Msa1025220 | Msa1371410 | 0.823495 | 1.343425e-53 | -8.615850e-47 |
| Msa1047020 | Msa1371410 | 0.824624 | 7.295866e-54 | -8.615850e-47 |
| Msa1050100 | Msa1371410 | 0.823962 | 1.044204e-53 | -8.615850e-47 |
| Msa1085850 | Msa1371410 | 0.804593 | 2.005483e-49 | -8.615850e-47 |
| Msa0270160 | Msa1371410 | 0.812204 | 4.769654e-51 | -8.615850e-47 |
| Msa0277600 | Msa1371410 | 0.859389 | 4.278071e-63 | -8.615850e-47 |
| Msa0301250 | Msa1371410 | 0.821310 | 4.322845e-53 | -8.615850e-47 |
| Msa0313060 | Msa1371410 | 0.832352 | 9.925717e-56 | -8.615850e-47 |
| Msa0315430 | Msa1371410 | 0.844135 | 9.120360e-59 | -8.615850e-47 |
| Msa0340560 | Msa1371410 | 0.828292 | 9.751938e-55 | -8.615850e-47 |
| Msa0363320 | Msa1371410 | 0.810364 | 1.196092e-50 | -8.615850e-47 |
| Msa1116940 | Msa1371410 | 0.874382 | 7.055342e-68 | -8.615850e-47 |
| Msa1136880 | Msa1371410 | 0.862316 | 5.524098e-64 | -8.615850e-47 |
| Msa1219760 | Msa1371410 | 0.842961 | 1.878041e-58 | -8.615850e-47 |
| Msa0529900 | Msa1371410 | 0.808428 | 3.112656e-50 | -8.615850e-47 |
| Msa0547920 | Msa1371410 | 0.861661 | 8.768849e-64 | -8.615850e-47 |
| Msa0554210 | Msa1371410 | 0.831491 | 1.619648e-55 | -8.615850e-47 |
| Msa0573550 | Msa1371410 | 0.821024 | 5.031080e-53 | -8.615850e-47 |
| Msa0929700 | Msa1371410 | 0.836902 | 7.128665e-57 | -8.615850e-47 |
| Msa0930890 | Msa1371410 | 0.816794 | 4.601188e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371410 | MtrunA17_Chr3g0138321 | 97.333 | 300 | 5 | 1 | 1 | 297 | 1 | 300 | 0.0 | 596 |
| Msa1371410 | MtrunA17_Chr8g0335501 | 36.715 | 207 | 125 | 4 | 78 | 280 | 50 | 254 | 2.98e-29 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371410 | AT2G20060.1 | 67.320 | 306 | 78 | 4 | 1 | 291 | 1 | 299 | 3.72e-146 | 412 |
| Msa1371410 | AT1G07320.2 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 3.84e-20 | 88.6 |
| Msa1371410 | AT1G07320.1 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 3.96e-20 | 88.6 |
| Msa1371410 | AT1G07320.4 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 4.07e-20 | 88.2 |
| Msa1371410 | AT1G07320.3 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 4.07e-20 | 88.2 |
Find 93 sgRNAs with CRISPR-Local
Find 479 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTACCTCAACCATTTATT+TGG | 0.072403 | tig0019197:-168701 | None:intergenic |
| CAACGAAGACAAGGGCTTTA+TGG | 0.163918 | tig0019197:+163422 | Msa1371410:CDS |
| CCCAGTGCTGCTGGGTTATA+TGG | 0.172532 | tig0019197:+162500 | Msa1371410:CDS |
| TTATTTGGGTGTGGATTTAT+TGG | 0.194249 | tig0019197:-168686 | None:intergenic |
| TGTTTCGGAGAGATGGGTTT+TGG | 0.215248 | tig0019197:-162145 | None:intergenic |
| GCTTCTAGTGTTTGAGGATT+TGG | 0.223422 | tig0019197:+167690 | Msa1371410:intron |
| CAAGATTAAAACTTAGGATT+TGG | 0.270503 | tig0019197:+168875 | Msa1371410:three_prime_UTR |
| CTCAAATGGTTAAGTTGTTA+TGG | 0.283472 | tig0019197:+168915 | Msa1371410:three_prime_UTR |
| TAAATCCACACCCAAATAAA+TGG | 0.297256 | tig0019197:+168690 | Msa1371410:exon |
| AATTCTGTTCACAGCATCTT+TGG | 0.299153 | tig0019197:-168638 | None:intergenic |
| TTTGATTCACCCAGTGCTGC+TGG | 0.304551 | tig0019197:+162491 | Msa1371410:CDS |
| TTGCTCGACCAGTTCCCTTT+TGG | 0.310177 | tig0019197:-164456 | None:intergenic |
| ATCTACGATCAGAAGTTTCT+TGG | 0.323553 | tig0019197:-167770 | None:intergenic |
| ATAAGAAAGAAGTAGCCTTT+TGG | 0.327708 | tig0019197:-162447 | None:intergenic |
| CTCTTCTCTTGCCGCTAGTT+AGG | 0.347311 | tig0019197:+162226 | Msa1371410:five_prime_UTR |
| TCGTTGTGAAAGTTGGTAAC+TGG | 0.350576 | tig0019197:-163405 | None:intergenic |
| GTAGGTTGATTCTTCAGTTA+TGG | 0.350673 | tig0019197:+162412 | Msa1371410:intron |
| CCAGTGCTGCTGGGTTATAT+GGG | 0.354877 | tig0019197:+162501 | Msa1371410:CDS |
| ATTAGTGAGGTCAGTGGGAC+TGG | 0.362388 | tig0019197:+164418 | Msa1371410:CDS |
| TATACAGCTTCTAGTGTTTG+AGG | 0.367365 | tig0019197:+167684 | Msa1371410:intron |
| AACTTCATTTACTCAGGATT+AGG | 0.367891 | tig0019197:+168739 | Msa1371410:three_prime_UTR |
| CCCATATAACCCAGCAGCAC+TGG | 0.368405 | tig0019197:-162501 | None:intergenic |
| ACTTCTTTCTTATCAATCCT+TGG | 0.378210 | tig0019197:+162457 | Msa1371410:CDS |
| GGTGTGGATTTATTGGAGAT+TGG | 0.392265 | tig0019197:-168679 | None:intergenic |
| ACTACCTCAACCATTTATTT+GGG | 0.392940 | tig0019197:-168700 | None:intergenic |
| GAGTTTGAAAGCGTGACTTC+GGG | 0.393295 | tig0019197:-164629 | None:intergenic |
| GAGAACCAACAGGTTTGTTT+CGG | 0.394983 | tig0019197:-162160 | None:intergenic |
| GCAACATCTGAGCGTGATAT+AGG | 0.405707 | tig0019197:+162723 | Msa1371410:CDS |
| AAAGCGTGACTTCGGGGCTT+AGG | 0.410919 | tig0019197:-164622 | None:intergenic |
| CTCAAGCAAAATATTCTCAT+TGG | 0.412421 | tig0019197:-168801 | None:intergenic |
| TGGGTCATTGCGTGGGCCTC+AGG | 0.414756 | tig0019197:+164483 | Msa1371410:CDS |
| TTGTTTCAAGATTAAAACTT+AGG | 0.418739 | tig0019197:+168869 | Msa1371410:three_prime_UTR |
| CATTTCTGCTCACCGTATCT+TGG | 0.423638 | tig0019197:+162532 | Msa1371410:CDS |
| GGTTTCTGATAAAATTATAC+AGG | 0.430088 | tig0019197:+168823 | Msa1371410:three_prime_UTR |
| CAATAAGAAGGTTCGGCGAC+TGG | 0.432512 | tig0019197:+164651 | Msa1371410:CDS |
| CAGGTTTGTTTCGGAGAGAT+GGG | 0.433251 | tig0019197:-162151 | None:intergenic |
| CTCAACCATTTATTTGGGTG+TGG | 0.441163 | tig0019197:-168695 | None:intergenic |
| TTATGCTGCAGGGCTCTGTC+AGG | 0.442320 | tig0019197:+163371 | Msa1371410:intron |
| GAGAAAGCCTTGGAACCAAA+AGG | 0.454529 | tig0019197:+164441 | Msa1371410:CDS |
| TCTAGTGTTTGAGGATTTGG+AGG | 0.457747 | tig0019197:+167693 | Msa1371410:CDS |
| GAAACAAACCTGTTGGTTCT+CGG | 0.461567 | tig0019197:+162162 | Msa1371410:five_prime_UTR |
| TGAGTTTGAAAGCGTGACTT+CGG | 0.462197 | tig0019197:-164630 | None:intergenic |
| ACAGGTTTGTTTCGGAGAGA+TGG | 0.462323 | tig0019197:-162152 | None:intergenic |
| GCAGCGTGCAAAACGCCAAC+AGG | 0.466799 | tig0019197:+163509 | Msa1371410:CDS |
| CTTGTCTTCGTTGTGAAAGT+TGG | 0.471718 | tig0019197:-163412 | None:intergenic |
| TCAAACTCAATAAGAAGGTT+CGG | 0.474336 | tig0019197:+164644 | Msa1371410:CDS |
| CGCTTTCAAACTCAATAAGA+AGG | 0.480982 | tig0019197:+164639 | Msa1371410:CDS |
| CAGTAGAAGTAGAAAAGCGT+TGG | 0.484013 | tig0019197:-162656 | None:intergenic |
| TGAACTATATCCTTCCGAAT+AGG | 0.487787 | tig0019197:-163471 | None:intergenic |
| CCTTGGAACCAAAAGGGAAC+TGG | 0.491414 | tig0019197:+164448 | Msa1371410:CDS |
| TGGCTTCTTTCATCTCCAAA+AGG | 0.496230 | tig0019197:+162432 | Msa1371410:CDS |
| GCAAGGCATGGGTCATTGCG+TGG | 0.496788 | tig0019197:+164475 | Msa1371410:CDS |
| TTGATTCACCCAGTGCTGCT+GGG | 0.499368 | tig0019197:+162492 | Msa1371410:CDS |
| CAAGAGCTCCGAGAACCAAC+AGG | 0.505865 | tig0019197:-162170 | None:intergenic |
| GTACTAAACTTCATTTACTC+AGG | 0.508949 | tig0019197:+168733 | Msa1371410:three_prime_UTR |
| AAACTGATACTTACAATGGA+TGG | 0.519437 | tig0019197:-167856 | None:intergenic |
| CTGTCAGCTCGTGCAGCAGA+AGG | 0.521868 | tig0019197:+164688 | Msa1371410:CDS |
| CCATATAACCCAGCAGCACT+GGG | 0.532120 | tig0019197:-162500 | None:intergenic |
| ATTAAAACTTAGGATTTGGA+TGG | 0.533638 | tig0019197:+168879 | Msa1371410:three_prime_UTR |
| AATAAGAAGGTTCGGCGACT+GGG | 0.536871 | tig0019197:+164652 | Msa1371410:CDS |
| AAAGCGTTGGGTGATTGATC+CGG | 0.543562 | tig0019197:-162643 | None:intergenic |
| TTAGTGAGGTCAGTGGGACT+GGG | 0.544271 | tig0019197:+164419 | Msa1371410:CDS |
| GTGGGACTGGGAGAAAGCCT+TGG | 0.549232 | tig0019197:+164431 | Msa1371410:CDS |
| CAACTTTCACAACGAAGACA+AGG | 0.552359 | tig0019197:+163413 | Msa1371410:CDS |
| AGAAAGCCTTGGAACCAAAA+GGG | 0.558506 | tig0019197:+164442 | Msa1371410:CDS |
| GGAACTGGTCGAGCAAGGCA+TGG | 0.559028 | tig0019197:+164463 | Msa1371410:CDS |
| TTTCTTATCAATCCTTGGCA+CGG | 0.559499 | tig0019197:+162462 | Msa1371410:CDS |
| GAATGCAATGTACCAAGATA+CGG | 0.566350 | tig0019197:-162544 | None:intergenic |
| AGCTCGTGCAGCAGAAGGAA+AGG | 0.568393 | tig0019197:+164693 | Msa1371410:CDS |
| CAAGGCATGGGTCATTGCGT+GGG | 0.570939 | tig0019197:+164476 | Msa1371410:CDS |
| AGTAGAAGTAGAAAAGCGTT+GGG | 0.572426 | tig0019197:-162655 | None:intergenic |
| ATCAAAGCAGCGCCGTGCCA+AGG | 0.573221 | tig0019197:-162474 | None:intergenic |
| AAACTATTAGTGAGGTCAGT+GGG | 0.576745 | tig0019197:+164413 | Msa1371410:CDS |
| CACACCCAAATAAATGGTTG+AGG | 0.579840 | tig0019197:+168696 | Msa1371410:exon |
| CAGTGCTGCTGGGTTATATG+GGG | 0.586267 | tig0019197:+162502 | Msa1371410:CDS |
| GAACTGGTCGAGCAAGGCAT+GGG | 0.586611 | tig0019197:+164464 | Msa1371410:CDS |
| AAAAGGGAACTGGTCGAGCA+AGG | 0.599214 | tig0019197:+164458 | Msa1371410:CDS |
| ATCACTGTGTTACAGAAATG+AGG | 0.601606 | tig0019197:-168778 | None:intergenic |
| TCTCTCCGAAACAAACCTGT+TGG | 0.602751 | tig0019197:+162155 | Msa1371410:five_prime_UTR |
| AAGAGAAGAGAACATAAATG+AGG | 0.610352 | tig0019197:-162213 | None:intergenic |
| GTGTTACAGAAATGAGGACA+TGG | 0.610594 | tig0019197:-168772 | None:intergenic |
| AACTTTCACAACGAAGACAA+GGG | 0.614854 | tig0019197:+163414 | Msa1371410:CDS |
| AATGAATGGCAACAGTTCAG+GGG | 0.626239 | tig0019197:+164580 | Msa1371410:intron |
| AGGGGTGGTGAAGCGAAGCA+TGG | 0.631679 | tig0019197:+164598 | Msa1371410:CDS |
| TGTTACAGAAATGAGGACAT+GGG | 0.643485 | tig0019197:-168771 | None:intergenic |
| CACGCTGCCACAAAACAACA+CGG | 0.652436 | tig0019197:-163494 | None:intergenic |
| AAACTTCTGATCGTAGATGA+CGG | 0.659438 | tig0019197:+167775 | Msa1371410:CDS |
| GAATGGCAACAGTTCAGGGG+TGG | 0.663853 | tig0019197:+164583 | Msa1371410:intron |
| GTTACAGAAATGAGGACATG+GGG | 0.672070 | tig0019197:-168770 | None:intergenic |
| AAAACTATTAGTGAGGTCAG+TGG | 0.674538 | tig0019197:+164412 | Msa1371410:CDS |
| AGTTTGAAAGCGTGACTTCG+GGG | 0.691763 | tig0019197:-164628 | None:intergenic |
| TCACGCTCAGATGTTGCGAG+AGG | 0.692190 | tig0019197:-162717 | None:intergenic |
| AAGAAGAGGTACCTAACTAG+CGG | 0.692546 | tig0019197:-162237 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTTTAAGAAAGA+AGG | - | tig0019197:164753-164772 | None:intergenic | 10.0% |
| !!! | TTTATAAATTTTCATTTAAC+AGG | - | tig0019197:165797-165816 | None:intergenic | 10.0% |
| !! | GTAATTTAAAAAATTATAGT+GGG | - | tig0019197:166082-166101 | None:intergenic | 10.0% |
| !!! | CACTATAATTTTTTAAATTA+CGG | + | tig0019197:166081-166100 | Msa1371410:intron | 10.0% |
| !! | AATTTCAAATAGAAAATTTA+TGG | - | tig0019197:166131-166150 | None:intergenic | 10.0% |
| !!! | TTTTATTATAGACAATTTAA+AGG | + | tig0019197:166397-166416 | Msa1371410:intron | 10.0% |
| !!! | TTATTATTTTTCCATATTTT+GGG | - | tig0019197:166913-166932 | None:intergenic | 10.0% |
| !!! | ATTATTATTTTTCCATATTT+TGG | - | tig0019197:166914-166933 | None:intergenic | 10.0% |
| !! | TTATTTATTTAAATGTAGAC+CGG | + | tig0019197:162624-162643 | Msa1371410:intron | 15.0% |
| !! | ACTTAGATATAAATATCTTA+TGG | + | tig0019197:162951-162970 | Msa1371410:intron | 15.0% |
| !! | ACAGTTATATTGATATATAT+TGG | + | tig0019197:163047-163066 | Msa1371410:intron | 15.0% |
| !! | AAAACTTAGATTTGTATTTA+TGG | - | tig0019197:163212-163231 | None:intergenic | 15.0% |
| !! | ATCTAAGTATATTATTAATG+TGG | + | tig0019197:163344-163363 | Msa1371410:intron | 15.0% |
| !! | TATGAATATGTGATTATAAA+CGG | + | tig0019197:165061-165080 | Msa1371410:intron | 15.0% |
| !! | TTACAAAAATAAACCAATAT+GGG | - | tig0019197:165820-165839 | None:intergenic | 15.0% |
| !! | ATTACAAAAATAAACCAATA+TGG | - | tig0019197:165821-165840 | None:intergenic | 15.0% |
| !! | CGTAATTTAAAAAATTATAG+TGG | - | tig0019197:166083-166102 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTTATCCTAATA+TGG | + | tig0019197:166141-166160 | Msa1371410:intron | 15.0% |
| !! | TAAATTAACTATTCCATATT+AGG | - | tig0019197:166157-166176 | None:intergenic | 15.0% |
| !! | AATTGTCTATAATAAAAGTT+GGG | - | tig0019197:166394-166413 | None:intergenic | 15.0% |
| !! | AAATTGTCTATAATAAAAGT+TGG | - | tig0019197:166395-166414 | None:intergenic | 15.0% |
| !! | AATAACAAAAAGTTAGTTAT+AGG | + | tig0019197:166447-166466 | Msa1371410:intron | 15.0% |
| !!! | ATTATCTTAGAATTTTGATT+GGG | - | tig0019197:166618-166637 | None:intergenic | 15.0% |
| !!! | TATTATCTTAGAATTTTGAT+TGG | - | tig0019197:166619-166638 | None:intergenic | 15.0% |
| !! | ATATGGAAAAATAATAATCT+AGG | + | tig0019197:166916-166935 | Msa1371410:intron | 15.0% |
| !!! | TATAATTTTACAGCAAAAAA+AGG | - | tig0019197:167003-167022 | None:intergenic | 15.0% |
| !! | AACTCATAAAATAAAGAAAA+AGG | + | tig0019197:167400-167419 | Msa1371410:intron | 15.0% |
| !! | ATTATATGTTAAATAAGAGT+CGG | + | tig0019197:167624-167643 | Msa1371410:intron | 15.0% |
| !!! | TCTATATTTTGAAATACATT+TGG | - | tig0019197:168098-168117 | None:intergenic | 15.0% |
| !! | AAATTATGAATGAAAATATC+CGG | - | tig0019197:168266-168285 | None:intergenic | 15.0% |
| !!! | ATAAGATCAACAATATTTTA+AGG | - | tig0019197:168370-168389 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACATGTTTTTGT+AGG | + | tig0019197:168570-168589 | Msa1371410:intron | 15.0% |
| !!! | TTTTTTAACATGTTTTTGTA+GGG | + | tig0019197:168571-168590 | Msa1371410:intron | 15.0% |
| !! | AAAATAAATGAATGAGTGAA+GGG | - | tig0019197:162364-162383 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATTCAATTGT+AGG | + | tig0019197:162394-162413 | Msa1371410:intron | 20.0% |
| !! | GATATTTATATCTAAGTTAC+AGG | - | tig0019197:162948-162967 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAACATTGTCAA+AGG | - | tig0019197:163242-163261 | None:intergenic | 20.0% |
| !!! | TTTTGGACAATAAATAACTA+AGG | + | tig0019197:163764-163783 | Msa1371410:intron | 20.0% |
| !! | ATTGAAACATATACAATTCT+TGG | - | tig0019197:163812-163831 | None:intergenic | 20.0% |
| !! | AATTCTTTCATTTGTCAATT+AGG | - | tig0019197:163919-163938 | None:intergenic | 20.0% |
| !! | ATAGTCATAGGATATATAAA+GGG | - | tig0019197:164232-164251 | None:intergenic | 20.0% |
| !!! | AAACATATTGTTTCATGTTT+TGG | + | tig0019197:164873-164892 | Msa1371410:intron | 20.0% |
| !!! | ACAATATTCTTATTTCTTGT+AGG | + | tig0019197:164928-164947 | Msa1371410:intron | 20.0% |
| !! | ATGAATATGTGATTATAAAC+GGG | + | tig0019197:165062-165081 | Msa1371410:intron | 20.0% |
| !! | ATATACAAATTGCTTTAGTA+TGG | + | tig0019197:165159-165178 | Msa1371410:intron | 20.0% |
| !!! | TCTGAAAAATATTTTATGCA+GGG | + | tig0019197:165226-165245 | Msa1371410:intron | 20.0% |
| !! | AAATATTAAAGAAAGTAGCT+GGG | - | tig0019197:165311-165330 | None:intergenic | 20.0% |
| !! | AAAATATTAAAGAAAGTAGC+TGG | - | tig0019197:165312-165331 | None:intergenic | 20.0% |
| !!! | TGGGTATTATAATTTTTTTG+AGG | - | tig0019197:165417-165436 | None:intergenic | 20.0% |
| !! | ATAATTGTGATTCTTTCAAT+GGG | - | tig0019197:165442-165461 | None:intergenic | 20.0% |
| !! | AATAATTGTGATTCTTTCAA+TGG | - | tig0019197:165443-165462 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | tig0019197:165548-165567 | None:intergenic | 20.0% |
| !! | GAAAATTTATAAACCCATAT+TGG | + | tig0019197:165804-165823 | Msa1371410:intron | 20.0% |
| !!! | TTTGTAATTTTTCATGTGAA+AGG | + | tig0019197:165833-165852 | Msa1371410:intron | 20.0% |
| !!! | ATGTTTTTTCTTTTTGAAAC+TGG | + | tig0019197:165947-165966 | Msa1371410:intron | 20.0% |
| !! | TGTATTTGGTATTCAAATTA+CGG | + | tig0019197:166034-166053 | Msa1371410:intron | 20.0% |
| !!! | ATTTAAAAAATTATAGTGGG+TGG | - | tig0019197:166079-166098 | None:intergenic | 20.0% |
| !! | TAAATATTAAAAAAAGGACG+TGG | + | tig0019197:166200-166219 | Msa1371410:intron | 20.0% |
| !! | TATTATAGACAATTTAAAGG+CGG | + | tig0019197:166400-166419 | Msa1371410:intron | 20.0% |
| !! | AATATATCAATGGTTATCAA+TGG | + | tig0019197:166508-166527 | Msa1371410:intron | 20.0% |
| !! | AATGAATGTCTGTTTATAAA+TGG | + | tig0019197:166763-166782 | Msa1371410:intron | 20.0% |
| !! | ATGAATGTCTGTTTATAAAT+GGG | + | tig0019197:166764-166783 | Msa1371410:intron | 20.0% |
| !! | AGATGTTAGAATATATCATA+TGG | + | tig0019197:167195-167214 | Msa1371410:intron | 20.0% |
| !! | TACAGTTAAACTAGTATAAA+TGG | - | tig0019197:167244-167263 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGGGATAATTA+TGG | - | tig0019197:167570-167589 | None:intergenic | 20.0% |
| !! | GAAAAAATTCAAAAAGTTCT+TGG | - | tig0019197:167734-167753 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTTTCAATCAAC+TGG | + | tig0019197:167741-167760 | Msa1371410:CDS | 20.0% |
| !!! | TAACTTTAGCTTTTCATTTA+CGG | - | tig0019197:167803-167822 | None:intergenic | 20.0% |
| !! | TGATTAAGAAAATAACTATG+AGG | - | tig0019197:168138-168157 | None:intergenic | 20.0% |
| !! | AATTATGAATGAAAATATCC+GGG | - | tig0019197:168265-168284 | None:intergenic | 20.0% |
| !! | AAAAATATATGTATGAGCAA+AGG | - | tig0019197:168556-168575 | None:intergenic | 20.0% |
| !! | TTGTTTCAAGATTAAAACTT+AGG | + | tig0019197:168869-168888 | Msa1371410:three_prime_UTR | 20.0% |
| ! | AATAAAAGAAGAAGAAGAAG+AGG | - | tig0019197:162254-162273 | None:intergenic | 25.0% |
| !! | AAATAAAAAACATGATGGTG+GGG | - | tig0019197:162278-162297 | None:intergenic | 25.0% |
| ! | GAAATAAAAAACATGATGGT+GGG | - | tig0019197:162279-162298 | None:intergenic | 25.0% |
| ! | TTGTAAGCAACAAAAGTTAA+CGG | - | tig0019197:162322-162341 | None:intergenic | 25.0% |
| ! | CAAAATAAATGAATGAGTGA+AGG | - | tig0019197:162365-162384 | None:intergenic | 25.0% |
| ! | GACAAACTTTAGGTATAAAA+TGG | - | tig0019197:162900-162919 | None:intergenic | 25.0% |
| !! | TCTAAAATTGAAGGAATTTG+TGG | + | tig0019197:162996-163015 | Msa1371410:intron | 25.0% |
| ! | ATATATCAATATAACTGTCG+TGG | - | tig0019197:163045-163064 | None:intergenic | 25.0% |
| ! | CATTACCTAAAAAAAAAGGT+TGG | - | tig0019197:163156-163175 | None:intergenic | 25.0% |
| ! | GATGCATTACCTAAAAAAAA+AGG | - | tig0019197:163160-163179 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGATATGCCTATT+CGG | + | tig0019197:163457-163476 | Msa1371410:CDS | 25.0% |
| !! | TGATATTTGTTACAGCTATA+TGG | - | tig0019197:163617-163636 | None:intergenic | 25.0% |
| ! | ATATAGCTGTAACAAATATC+AGG | + | tig0019197:163616-163635 | Msa1371410:intron | 25.0% |
| ! | AAAATGATTGAGTATTTCCA+CGG | - | tig0019197:163659-163678 | None:intergenic | 25.0% |
| !! | TTTATCATTTTGAATTGCTC+TGG | + | tig0019197:163683-163702 | Msa1371410:intron | 25.0% |
| ! | GACAATAAATAACTAAGGTT+TGG | + | tig0019197:163769-163788 | Msa1371410:intron | 25.0% |
| ! | TCTTTCACTTTACATATGAT+AGG | + | tig0019197:163881-163900 | Msa1371410:intron | 25.0% |
| ! | CTTTCACTTTACATATGATA+GGG | + | tig0019197:163882-163901 | Msa1371410:intron | 25.0% |
| ! | CCAGAATTTATTCTAATGTA+AGG | - | tig0019197:163945-163964 | None:intergenic | 25.0% |
| ! | CCTTACATTAGAATAAATTC+TGG | + | tig0019197:163942-163961 | Msa1371410:intron | 25.0% |
| !!! | TAGAATAAATTCTGGAATAC+TGG | + | tig0019197:163950-163969 | Msa1371410:intron | 25.0% |
| !!! | AGAATAAATTCTGGAATACT+GGG | + | tig0019197:163951-163970 | Msa1371410:intron | 25.0% |
| ! | ATAGGATATATAAAGGGAAA+AGG | - | tig0019197:164226-164245 | None:intergenic | 25.0% |
| ! | GATAGTCATAGGATATATAA+AGG | - | tig0019197:164233-164252 | None:intergenic | 25.0% |
| ! | TTCAACAAAAACTATTAGTG+AGG | + | tig0019197:164405-164424 | Msa1371410:CDS | 25.0% |
| ! | TGAATATGTGATTATAAACG+GGG | + | tig0019197:165063-165082 | Msa1371410:intron | 25.0% |
| !! | TTTCTTTCTTTTAATGTAGC+AGG | - | tig0019197:165202-165221 | None:intergenic | 25.0% |
| !! | GTCTGAAAAATATTTTATGC+AGG | + | tig0019197:165225-165244 | Msa1371410:intron | 25.0% |
| !! | AATATTTTATGCAGGGATAA+TGG | + | tig0019197:165233-165252 | Msa1371410:intron | 25.0% |
| ! | AATATTAAAGAAAGTAGCTG+GGG | - | tig0019197:165310-165329 | None:intergenic | 25.0% |
| ! | TAATTGTGATTCTTTCAATG+GGG | - | tig0019197:165441-165460 | None:intergenic | 25.0% |
| !!! | AAATTGCGTTTTGATTTTAC+TGG | + | tig0019197:165633-165652 | Msa1371410:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | - | tig0019197:165661-165680 | None:intergenic | 25.0% |
| !!! | TCGTTATCTTCTGAAAATTT+TGG | + | tig0019197:165920-165939 | Msa1371410:intron | 25.0% |
| !!! | TTTTTGAAACTGGAAAAATC+TGG | + | tig0019197:165957-165976 | Msa1371410:intron | 25.0% |
| ! | ATTTATGTGACTTTGCTTAA+GGG | + | tig0019197:165980-165999 | Msa1371410:intron | 25.0% |
| ! | CTTGAATTTGATGTTGTATT+TGG | + | tig0019197:166020-166039 | Msa1371410:intron | 25.0% |
| !! | TTTTCCAGATCTGAATTTTT+AGG | + | tig0019197:166270-166289 | Msa1371410:intron | 25.0% |
| ! | TTGATGAAGACGAATAATAA+TGG | + | tig0019197:166315-166334 | Msa1371410:intron | 25.0% |
| ! | CTATAATAAAAGTTGGGAAT+GGG | - | tig0019197:166388-166407 | None:intergenic | 25.0% |
| ! | TCTATAATAAAAGTTGGGAA+TGG | - | tig0019197:166389-166408 | None:intergenic | 25.0% |
| ! | ATTATAGACAATTTAAAGGC+GGG | + | tig0019197:166401-166420 | Msa1371410:intron | 25.0% |
| ! | ATTCATATATCATCCAATCT+GGG | - | tig0019197:166746-166765 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTCTTAGAATTT+GGG | - | tig0019197:166838-166857 | None:intergenic | 25.0% |
| ! | TATATATATATAACCGATGC+AGG | + | tig0019197:167068-167087 | Msa1371410:intron | 25.0% |
| !!! | CTATTTTGTCTCTAAAAATG+AGG | - | tig0019197:167113-167132 | None:intergenic | 25.0% |
| ! | AAACTAGTATAAATGGTTCT+AGG | - | tig0019197:167237-167256 | None:intergenic | 25.0% |
| !! | TTTTCCCTTGATTACAATTA+GGG | - | tig0019197:167380-167399 | None:intergenic | 25.0% |
| !! | TTTTTCCCTTGATTACAATT+AGG | - | tig0019197:167381-167400 | None:intergenic | 25.0% |
| !! | ATTGCAATAAGACGTTATTT+TGG | - | tig0019197:167509-167528 | None:intergenic | 25.0% |
| !! | CAATCGCAAAAAGTATAAAA+GGG | - | tig0019197:167580-167599 | None:intergenic | 25.0% |
| !! | ACAATCGCAAAAAGTATAAA+AGG | - | tig0019197:167581-167600 | None:intergenic | 25.0% |
| !!! | AACTTTAGCTTTTCATTTAC+GGG | - | tig0019197:167802-167821 | None:intergenic | 25.0% |
| ! | AAATCTTATAGAAGCAACAT+GGG | - | tig0019197:167884-167903 | None:intergenic | 25.0% |
| !! | TCTACTAGTAGATATCTTTT+AGG | + | tig0019197:167927-167946 | Msa1371410:intron | 25.0% |
| !! | CTACTAGTAGATATCTTTTA+GGG | + | tig0019197:167928-167947 | Msa1371410:intron | 25.0% |
| !! | GAAAATAACTATGAGGATTT+TGG | - | tig0019197:168131-168150 | None:intergenic | 25.0% |
| !! | TATTTTGTTGCATGATACTT+TGG | + | tig0019197:168609-168628 | Msa1371410:CDS | 25.0% |
| ! | GGTTTCTGATAAAATTATAC+AGG | + | tig0019197:168823-168842 | Msa1371410:three_prime_UTR | 25.0% |
| ! | CAAGATTAAAACTTAGGATT+TGG | + | tig0019197:168875-168894 | Msa1371410:three_prime_UTR | 25.0% |
| ! | ATTAAAACTTAGGATTTGGA+TGG | + | tig0019197:168879-168898 | Msa1371410:three_prime_UTR | 25.0% |
| !!! | GTGAAATTTTAATGCTCAAA+TGG | + | tig0019197:168901-168920 | Msa1371410:three_prime_UTR | 25.0% |
| AAGAGAAGAGAACATAAATG+AGG | - | tig0019197:162216-162235 | None:intergenic | 30.0% | |
| !! | AATAAAAAACATGATGGTGG+GGG | - | tig0019197:162277-162296 | None:intergenic | 30.0% |
| GGAAATAAAAAACATGATGG+TGG | - | tig0019197:162280-162299 | None:intergenic | 30.0% | |
| AGCGGAAATAAAAAACATGA+TGG | - | tig0019197:162283-162302 | None:intergenic | 30.0% | |
| ! | ATAAGAAAGAAGTAGCCTTT+TGG | - | tig0019197:162450-162469 | None:intergenic | 30.0% |
| ACTTCTTTCTTATCAATCCT+TGG | + | tig0019197:162457-162476 | Msa1371410:CDS | 30.0% | |
| ! | TTTTTGGACAATAAGTCAGA+TGG | - | tig0019197:162696-162715 | None:intergenic | 30.0% |
| ATTCATGTACTACAGAATGA+TGG | - | tig0019197:162764-162783 | None:intergenic | 30.0% | |
| AATGCATTGTAGATGATCAT+TGG | - | tig0019197:162829-162848 | None:intergenic | 30.0% | |
| ! | GTATTGATCGCATTATGATT+TGG | + | tig0019197:163531-163550 | Msa1371410:intron | 30.0% |
| AAGATTTATAGCATTTCCGT+TGG | - | tig0019197:163581-163600 | None:intergenic | 30.0% | |
| ACGGAAATGCTATAAATCTT+AGG | + | tig0019197:163581-163600 | Msa1371410:intron | 30.0% | |
| ! | GCAGACAAACATTTAGATTT+TGG | + | tig0019197:163747-163766 | Msa1371410:intron | 30.0% |
| AAGACAATGAGAAAATCAGA+GGG | - | tig0019197:164066-164085 | None:intergenic | 30.0% | |
| AAAGACAATGAGAAAATCAG+AGG | - | tig0019197:164067-164086 | None:intergenic | 30.0% | |
| TATATAAAGGGAAAAGGAAG+TGG | - | tig0019197:164220-164239 | None:intergenic | 30.0% | |
| ! | ATGCTATGATTGATAGTCAT+AGG | - | tig0019197:164244-164263 | None:intergenic | 30.0% |
| TCATAGCATCTAGTAATAAG+AGG | + | tig0019197:164255-164274 | Msa1371410:intron | 30.0% | |
| !! | GTGATCAACATATAATGGAT+TGG | + | tig0019197:164279-164298 | Msa1371410:intron | 30.0% |
| ! | TTAGCTATCAAATTTTCCTG+CGG | + | tig0019197:164337-164356 | Msa1371410:intron | 30.0% |
| ATTAATTACCACCACTGAAT+GGG | - | tig0019197:164554-164573 | None:intergenic | 30.0% | |
| TATTAATTACCACCACTGAA+TGG | - | tig0019197:164555-164574 | None:intergenic | 30.0% | |
| TCAAACTCAATAAGAAGGTT+CGG | + | tig0019197:164644-164663 | Msa1371410:CDS | 30.0% | |
| TAAGAAAGAAGGCAATGATA+AGG | - | tig0019197:164742-164761 | None:intergenic | 30.0% | |
| TATGTAGTGTGAATTTACTC+TGG | + | tig0019197:164965-164984 | Msa1371410:intron | 30.0% | |
| !! | ATCTAGCTTTCAGCTAATAT+GGG | - | tig0019197:165284-165303 | None:intergenic | 30.0% |
| !! | TATCTAGCTTTCAGCTAATA+TGG | - | tig0019197:165285-165304 | None:intergenic | 30.0% |
| TTTATCTGTGAGAAAACCTT+AGG | + | tig0019197:165330-165349 | Msa1371410:intron | 30.0% | |
| AATTGTGATTCTTTCAATGG+GGG | - | tig0019197:165440-165459 | None:intergenic | 30.0% | |
| AAGAAGAAAGATGAGATTCA+TGG | - | tig0019197:165774-165793 | None:intergenic | 30.0% | |
| GATTTATGTGACTTTGCTTA+AGG | + | tig0019197:165979-165998 | Msa1371410:intron | 30.0% | |
| TTTATGTGACTTTGCTTAAG+GGG | + | tig0019197:165981-166000 | Msa1371410:intron | 30.0% | |
| !! | TAAAAAATTATAGTGGGTGG+AGG | - | tig0019197:166076-166095 | None:intergenic | 30.0% |
| TCTTCCTAAAAATTCAGATC+TGG | - | tig0019197:166277-166296 | None:intergenic | 30.0% | |
| TTATAGACAATTTAAAGGCG+GGG | + | tig0019197:166402-166421 | Msa1371410:intron | 30.0% | |
| TCAATGGATGAGAAAGTAAT+TGG | + | tig0019197:166524-166543 | Msa1371410:intron | 30.0% | |
| ATGAGAAAGTAATTGGTGTA+TGG | + | tig0019197:166531-166550 | Msa1371410:intron | 30.0% | |
| ! | ACAAATTTGTGTTTTGTGCA+TGG | + | tig0019197:166557-166576 | Msa1371410:intron | 30.0% |
| CATTCATATATCATCCAATC+TGG | - | tig0019197:166747-166766 | None:intergenic | 30.0% | |
| ! | CCTTACAAAACTAACTTGTA+AGG | - | tig0019197:166800-166819 | None:intergenic | 30.0% |
| !!! | CCTTACAAGTTAGTTTTGTA+AGG | + | tig0019197:166797-166816 | Msa1371410:intron | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | + | tig0019197:166807-166826 | Msa1371410:intron | 30.0% |
| ! | TGATTCTTAGAATTTGGGTT+GGG | - | tig0019197:166833-166852 | None:intergenic | 30.0% |
| TTGATTCTTAGAATTTGGGT+TGG | - | tig0019197:166834-166853 | None:intergenic | 30.0% | |
| !! | GCAAGTTGATTCTTAGAATT+TGG | - | tig0019197:166839-166858 | None:intergenic | 30.0% |
| TCCAAAGTATGGTCAATAAA+GGG | + | tig0019197:167305-167324 | Msa1371410:intron | 30.0% | |
| TACAATTAGGGTTACATACA+TGG | - | tig0019197:167368-167387 | None:intergenic | 30.0% | |
| TGTAACCCTAATTGTAATCA+AGG | + | tig0019197:167372-167391 | Msa1371410:intron | 30.0% | |
| GTAACCCTAATTGTAATCAA+GGG | + | tig0019197:167373-167392 | Msa1371410:intron | 30.0% | |
| !!! | GAATTTTTTCAATCAACTGG+AGG | + | tig0019197:167744-167763 | Msa1371410:CDS | 30.0% |
| !!! | ACTTTAGCTTTTCATTTACG+GGG | - | tig0019197:167801-167820 | None:intergenic | 30.0% |
| AAACTGATACTTACAATGGA+TGG | - | tig0019197:167859-167878 | None:intergenic | 30.0% | |
| GGTAAAACTGATACTTACAA+TGG | - | tig0019197:167863-167882 | None:intergenic | 30.0% | |
| GAAATCTTATAGAAGCAACA+TGG | - | tig0019197:167885-167904 | None:intergenic | 30.0% | |
| TGCTTCTATAAGATTTCTCA+TGG | + | tig0019197:167888-167907 | Msa1371410:intron | 30.0% | |
| ! | ATAACTATGAGGATTTTGGA+GGG | - | tig0019197:168127-168146 | None:intergenic | 30.0% |
| ! | AATAACTATGAGGATTTTGG+AGG | - | tig0019197:168128-168147 | None:intergenic | 30.0% |
| TCACACTTACCAACTTATTT+AGG | + | tig0019197:168194-168213 | Msa1371410:intron | 30.0% | |
| !! | TCTCCATCATTTTTGTAAGA+TGG | + | tig0019197:168482-168501 | Msa1371410:intron | 30.0% |
| GATCCATCTTACAAAAATGA+TGG | - | tig0019197:168488-168507 | None:intergenic | 30.0% | |
| TTATTTGGGTGTGGATTTAT+TGG | - | tig0019197:168689-168708 | None:intergenic | 30.0% | |
| TAAATCCACACCCAAATAAA+TGG | + | tig0019197:168690-168709 | Msa1371410:exon | 30.0% | |
| ACTACCTCAACCATTTATTT+GGG | - | tig0019197:168703-168722 | None:intergenic | 30.0% | |
| TACTACCTCAACCATTTATT+TGG | - | tig0019197:168704-168723 | None:intergenic | 30.0% | |
| GTACTAAACTTCATTTACTC+AGG | + | tig0019197:168733-168752 | Msa1371410:three_prime_UTR | 30.0% | |
| AACTTCATTTACTCAGGATT+AGG | + | tig0019197:168739-168758 | Msa1371410:three_prime_UTR | 30.0% | |
| CTCAAGCAAAATATTCTCAT+TGG | - | tig0019197:168804-168823 | None:intergenic | 30.0% | |
| ! | CAATGAGAATATTTTGCTTG+AGG | + | tig0019197:168802-168821 | Msa1371410:three_prime_UTR | 30.0% |
| ! | CTCAAATGGTTAAGTTGTTA+TGG | + | tig0019197:168915-168934 | Msa1371410:three_prime_UTR | 30.0% |
| !! | GTAGGTTGATTCTTCAGTTA+TGG | + | tig0019197:162412-162431 | Msa1371410:intron | 35.0% |
| TTTCTTATCAATCCTTGGCA+CGG | + | tig0019197:162462-162481 | Msa1371410:CDS | 35.0% | |
| GAATGCAATGTACCAAGATA+CGG | - | tig0019197:162547-162566 | None:intergenic | 35.0% | |
| !! | AGTAGAAGTAGAAAAGCGTT+GGG | - | tig0019197:162658-162677 | None:intergenic | 35.0% |
| TCTGTAGTACATGAATATGC+TGG | + | tig0019197:162768-162787 | Msa1371410:intron | 35.0% | |
| TTGCATGAGATAAAGCAGAA+AGG | - | tig0019197:162798-162817 | None:intergenic | 35.0% | |
| CTTGAGTCTTGACAAACTTT+AGG | - | tig0019197:162910-162929 | None:intergenic | 35.0% | |
| !! | TGCTTCTGCTCTAAAATTGA+AGG | + | tig0019197:162987-163006 | Msa1371410:intron | 35.0% |
| !!! | GTGCTCCAACCTTTTTTTTT+AGG | + | tig0019197:163148-163167 | Msa1371410:intron | 35.0% |
| CTTTGTTCTCGTTCTTGAAA+AGG | - | tig0019197:163186-163205 | None:intergenic | 35.0% | |
| !! | AACTCATCTAGTCTTGATCA+TGG | + | tig0019197:163295-163314 | Msa1371410:intron | 35.0% |
| !! | ACTCATCTAGTCTTGATCAT+GGG | + | tig0019197:163296-163315 | Msa1371410:intron | 35.0% |
| AACTTTCACAACGAAGACAA+GGG | + | tig0019197:163414-163433 | Msa1371410:CDS | 35.0% | |
| ! | TTTTGATATGCCTATTCGGA+AGG | + | tig0019197:163461-163480 | Msa1371410:CDS | 35.0% |
| TGAACTATATCCTTCCGAAT+AGG | - | tig0019197:163474-163493 | None:intergenic | 35.0% | |
| ATAATGCGATCAATACCTGT+TGG | - | tig0019197:163527-163546 | None:intergenic | 35.0% | |
| ! | ATGATTTGGAACCATTGAAC+TGG | + | tig0019197:163545-163564 | Msa1371410:intron | 35.0% |
| ! | TGATTTGGAACCATTGAACT+GGG | + | tig0019197:163546-163565 | Msa1371410:intron | 35.0% |
| TGTATTCAATTGTTGAACCG+TGG | + | tig0019197:163639-163658 | Msa1371410:intron | 35.0% | |
| !!! | TCTCATTGATTTTTGCCAAC+AGG | + | tig0019197:164375-164394 | Msa1371410:intron | 35.0% |
| !!! | CTCATTGATTTTTGCCAACA+GGG | + | tig0019197:164376-164395 | Msa1371410:intron | 35.0% |
| AAAACTATTAGTGAGGTCAG+TGG | + | tig0019197:164412-164431 | Msa1371410:CDS | 35.0% | |
| AAACTATTAGTGAGGTCAGT+GGG | + | tig0019197:164413-164432 | Msa1371410:CDS | 35.0% | |
| TAAAGAATGTTCTGTACCTG+AGG | - | tig0019197:164502-164521 | None:intergenic | 35.0% | |
| AATGGGAGGAGGAATAAAAT+GGG | - | tig0019197:164537-164556 | None:intergenic | 35.0% | |
| TTAATGAATGGCAACAGTTC+AGG | + | tig0019197:164578-164597 | Msa1371410:intron | 35.0% | |
| TAATGAATGGCAACAGTTCA+GGG | + | tig0019197:164579-164598 | Msa1371410:intron | 35.0% | |
| CGCTTTCAAACTCAATAAGA+AGG | + | tig0019197:164639-164658 | Msa1371410:CDS | 35.0% | |
| AATGATAAGGAGAGTGATAG+AGG | - | tig0019197:164729-164748 | None:intergenic | 35.0% | |
| CAATGTTAAGAGTCTCACAT+TGG | + | tig0019197:165027-165046 | Msa1371410:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | tig0019197:165531-165550 | None:intergenic | 35.0% | |
| AATAATCCATTGAAGAGTGG+AGG | - | tig0019197:165734-165753 | None:intergenic | 35.0% | |
| TGGAATAATCCATTGAAGAG+TGG | - | tig0019197:165737-165756 | None:intergenic | 35.0% | |
| AAGAAAGATGAGATTCATGG+TGG | - | tig0019197:165771-165790 | None:intergenic | 35.0% | |
| TGCTTAAGGGGTAATATGAA+TGG | + | tig0019197:165993-166012 | Msa1371410:intron | 35.0% | |
| GCAGATATGAACATTTCTTG+TGG | + | tig0019197:166241-166260 | Msa1371410:intron | 35.0% | |
| TAACCCAACTATACAAAACC+GGG | - | tig0019197:166593-166612 | None:intergenic | 35.0% | |
| CTAACCCAACTATACAAAAC+CGG | - | tig0019197:166594-166613 | None:intergenic | 35.0% | |
| ! | CAAAACTAACTTGTAAGGTG+AGG | - | tig0019197:166795-166814 | None:intergenic | 35.0% |
| CTCCAAAGTATGGTCAATAA+AGG | + | tig0019197:167304-167323 | Msa1371410:intron | 35.0% | |
| ACCCTTTATTGACCATACTT+TGG | - | tig0019197:167309-167328 | None:intergenic | 35.0% | |
| TCATTGAACTCAAAGAAAGC+CGG | - | tig0019197:167458-167477 | None:intergenic | 35.0% | |
| TATACAGCTTCTAGTGTTTG+AGG | + | tig0019197:167684-167703 | Msa1371410:intron | 35.0% | |
| !!! | AAGTTCTTGGTTTTATGCGT+GGG | - | tig0019197:167721-167740 | None:intergenic | 35.0% |
| !!! | AAAGTTCTTGGTTTTATGCG+TGG | - | tig0019197:167722-167741 | None:intergenic | 35.0% |
| ATCTACGATCAGAAGTTTCT+TGG | - | tig0019197:167773-167792 | None:intergenic | 35.0% | |
| AAACTTCTGATCGTAGATGA+CGG | + | tig0019197:167775-167794 | Msa1371410:CDS | 35.0% | |
| !! | TAACTATGAGGATTTTGGAG+GGG | - | tig0019197:168126-168145 | None:intergenic | 35.0% |
| GGAAACTCTCCTAAATAAGT+TGG | - | tig0019197:168206-168225 | None:intergenic | 35.0% | |
| TAGATTCTTCAGTCTGAGTT+TGG | + | tig0019197:168400-168419 | Msa1371410:intron | 35.0% | |
| AATTCTGTTCACAGCATCTT+TGG | - | tig0019197:168641-168660 | None:intergenic | 35.0% | |
| TGTTACAGAAATGAGGACAT+GGG | - | tig0019197:168774-168793 | None:intergenic | 35.0% | |
| ATCACTGTGTTACAGAAATG+AGG | - | tig0019197:168781-168800 | None:intergenic | 35.0% | |
| ! | GAGAACCAACAGGTTTGTTT+CGG | - | tig0019197:162163-162182 | None:intergenic | 40.0% |
| !! | GAAACAAACCTGTTGGTTCT+CGG | + | tig0019197:162162-162181 | Msa1371410:five_prime_UTR | 40.0% |
| !! | AAGAAGAGGTACCTAACTAG+CGG | - | tig0019197:162240-162259 | None:intergenic | 40.0% |
| GGCAATTTGAGCTTAACTAG+CGG | - | tig0019197:162301-162320 | None:intergenic | 40.0% | |
| TGGCTTCTTTCATCTCCAAA+AGG | + | tig0019197:162432-162451 | Msa1371410:CDS | 40.0% | |
| ! | CAGTAGAAGTAGAAAAGCGT+TGG | - | tig0019197:162659-162678 | None:intergenic | 40.0% |
| TGAGCGTGATATAGGTATGA+AGG | + | tig0019197:162731-162750 | Msa1371410:intron | 40.0% | |
| AATTGAAGGAATTTGTGGCC+AGG | + | tig0019197:163001-163020 | Msa1371410:intron | 40.0% | |
| ATTGAAGGAATTTGTGGCCA+GGG | + | tig0019197:163002-163021 | Msa1371410:intron | 40.0% | |
| AAGACCCAAAAGTTAAACCC+TGG | - | tig0019197:163022-163041 | None:intergenic | 40.0% | |
| AGATGAGTTGCCATGATAGA+TGG | - | tig0019197:163284-163303 | None:intergenic | 40.0% | |
| AATGTGGTTCATTATGCTGC+AGG | + | tig0019197:163360-163379 | Msa1371410:intron | 40.0% | |
| ATGTGGTTCATTATGCTGCA+GGG | + | tig0019197:163361-163380 | Msa1371410:intron | 40.0% | |
| !! | TCGTTGTGAAAGTTGGTAAC+TGG | - | tig0019197:163408-163427 | None:intergenic | 40.0% |
| CTTGTCTTCGTTGTGAAAGT+TGG | - | tig0019197:163415-163434 | None:intergenic | 40.0% | |
| CAACTTTCACAACGAAGACA+AGG | + | tig0019197:163413-163432 | Msa1371410:CDS | 40.0% | |
| !!! | AAGGGCTTTATGGTTTTAGC+TGG | + | tig0019197:163432-163451 | Msa1371410:CDS | 40.0% |
| !!! | TAGTTCACCGTGTTGTTTTG+TGG | + | tig0019197:163487-163506 | Msa1371410:CDS | 40.0% |
| GATTACATGTCCCAGTTCAA+TGG | - | tig0019197:163559-163578 | None:intergenic | 40.0% | |
| AACTGGGACATGTAATCCAA+CGG | + | tig0019197:163562-163581 | Msa1371410:intron | 40.0% | |
| ! | AGAATTGTGTAGAGAGGCAT+CGG | - | tig0019197:164022-164041 | None:intergenic | 40.0% |
| ACAATGAGAAAATCAGAGGG+CGG | - | tig0019197:164063-164082 | None:intergenic | 40.0% | |
| TCCTTGATATGTGACAGCAA+GGG | - | tig0019197:164120-164139 | None:intergenic | 40.0% | |
| ATCCTTGATATGTGACAGCA+AGG | - | tig0019197:164121-164140 | None:intergenic | 40.0% | |
| GAGGCGTGATCAACATATAA+TGG | + | tig0019197:164274-164293 | Msa1371410:intron | 40.0% | |
| AAAACAAGTAACATAGCCGC+AGG | - | tig0019197:164356-164375 | None:intergenic | 40.0% | |
| TTGTTGAATGAGTTCCCTGT+TGG | - | tig0019197:164393-164412 | None:intergenic | 40.0% | |
| AGAAAGCCTTGGAACCAAAA+GGG | + | tig0019197:164442-164461 | Msa1371410:CDS | 40.0% | |
| GAATGGGAGGAGGAATAAAA+TGG | - | tig0019197:164538-164557 | None:intergenic | 40.0% | |
| AATGAATGGCAACAGTTCAG+GGG | + | tig0019197:164580-164599 | Msa1371410:intron | 40.0% | |
| ! | TGAGTTTGAAAGCGTGACTT+CGG | - | tig0019197:164633-164652 | None:intergenic | 40.0% |
| TAATAGTTTACCAGCCAAGC+TGG | + | tig0019197:164897-164916 | Msa1371410:intron | 40.0% | |
| TTGTAAATGCCACCCAAAAC+CGG | - | tig0019197:165108-165127 | None:intergenic | 40.0% | |
| TAGCTTTCAGCTAATATGGG+AGG | - | tig0019197:165281-165300 | None:intergenic | 40.0% | |
| ! | ACCGAGCCTCTAAAAACTAT+GGG | + | tig0019197:165391-165410 | Msa1371410:intron | 40.0% |
| !! | TTGAGGCCCATAGTTTTTAG+AGG | - | tig0019197:165400-165419 | None:intergenic | 40.0% |
| !! | ATTTACCTAACGGTGTCGTT+TGG | - | tig0019197:165521-165540 | None:intergenic | 40.0% |
| TTCCTATGAAATAGGAGGCT+CGG | - | tig0019197:165679-165698 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | + | tig0019197:165679-165698 | Msa1371410:intron | 40.0% | |
| GTTTCAATAGCCTAAGGTCA+GGG | - | tig0019197:165705-165724 | None:intergenic | 40.0% | |
| ! | TCATGGTGGTAATGCATAAC+TGG | - | tig0019197:165757-165776 | None:intergenic | 40.0% |
| !!! | GGGGTCACTATTTTTGTTGT+TGG | + | tig0019197:166421-166440 | Msa1371410:intron | 40.0% |
| CGACAGTTCAGATCAAAAGT+TGG | - | tig0019197:166476-166495 | None:intergenic | 40.0% | |
| AACCCAACTATACAAAACCG+GGG | - | tig0019197:166592-166611 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTATAGTTGGGTT+AGG | + | tig0019197:166592-166611 | Msa1371410:intron | 40.0% |
| ! | GATTGTGGAAACTTGATAGC+AGG | - | tig0019197:166671-166690 | None:intergenic | 40.0% |
| GCTATCAAGTTTCCACAATC+AGG | + | tig0019197:166671-166690 | Msa1371410:intron | 40.0% | |
| ACGCTTCAGATGTGAATCTT+GGG | + | tig0019197:166696-166715 | Msa1371410:intron | 40.0% | |
| TTTAGAAGAACAGCCTGCAT+CGG | - | tig0019197:167084-167103 | None:intergenic | 40.0% | |
| ! | GTCTTCACAGAATTGCTGTT+CGG | + | tig0019197:167141-167160 | Msa1371410:intron | 40.0% |
| TGTTTGTGTACACTGATCTC+TGG | + | tig0019197:167651-167670 | Msa1371410:intron | 40.0% | |
| GCTTCTAGTGTTTGAGGATT+TGG | + | tig0019197:167690-167709 | Msa1371410:intron | 40.0% | |
| TCTAGTGTTTGAGGATTTGG+AGG | + | tig0019197:167693-167712 | Msa1371410:CDS | 40.0% | |
| !!! | TCTTTTAGGGTATGTTGCGA+TGG | + | tig0019197:167941-167960 | Msa1371410:intron | 40.0% |
| AAGTGTGAGAAGAACAATGG+AGG | - | tig0019197:168182-168201 | None:intergenic | 40.0% | |
| GGTAAGTGTGAGAAGAACAA+TGG | - | tig0019197:168185-168204 | None:intergenic | 40.0% | |
| TTTCCTCATCTTCTCCTCAA+AGG | + | tig0019197:168221-168240 | Msa1371410:intron | 40.0% | |
| TTCCTCATCTTCTCCTCAAA+GGG | + | tig0019197:168222-168241 | Msa1371410:intron | 40.0% | |
| AGTGAAGTTGAACAGTGAAG+CGG | - | tig0019197:168346-168365 | None:intergenic | 40.0% | |
| GGTGTGGATTTATTGGAGAT+TGG | - | tig0019197:168682-168701 | None:intergenic | 40.0% | |
| CTCAACCATTTATTTGGGTG+TGG | - | tig0019197:168698-168717 | None:intergenic | 40.0% | |
| CACACCCAAATAAATGGTTG+AGG | + | tig0019197:168696-168715 | Msa1371410:exon | 40.0% | |
| GTTACAGAAATGAGGACATG+GGG | - | tig0019197:168773-168792 | None:intergenic | 40.0% | |
| GTGTTACAGAAATGAGGACA+TGG | - | tig0019197:168775-168794 | None:intergenic | 40.0% | |
| !! | GTTTCGGAGAGATGGGTTTT+GGG | - | tig0019197:162147-162166 | None:intergenic | 45.0% |
| !! | TGTTTCGGAGAGATGGGTTT+TGG | - | tig0019197:162148-162167 | None:intergenic | 45.0% |
| ! | CAGGTTTGTTTCGGAGAGAT+GGG | - | tig0019197:162154-162173 | None:intergenic | 45.0% |
| ! | ACAGGTTTGTTTCGGAGAGA+TGG | - | tig0019197:162155-162174 | None:intergenic | 45.0% |
| TCTCTCCGAAACAAACCTGT+TGG | + | tig0019197:162155-162174 | Msa1371410:five_prime_UTR | 45.0% | |
| CATTTCTGCTCACCGTATCT+TGG | + | tig0019197:162532-162551 | Msa1371410:CDS | 45.0% | |
| !! | AAAGCGTTGGGTGATTGATC+CGG | - | tig0019197:162646-162665 | None:intergenic | 45.0% |
| ! | AGATGTTGCGAGAGGCTTTT+TGG | - | tig0019197:162712-162731 | None:intergenic | 45.0% |
| GCAACATCTGAGCGTGATAT+AGG | + | tig0019197:162723-162742 | Msa1371410:CDS | 45.0% | |
| !! | TGTGGCCAGGGTTTAACTTT+TGG | + | tig0019197:163014-163033 | Msa1371410:intron | 45.0% |
| !! | GTGGCCAGGGTTTAACTTTT+GGG | + | tig0019197:163015-163034 | Msa1371410:intron | 45.0% |
| ! | TTGCCATGATAGATGGTGGT+AGG | - | tig0019197:163277-163296 | None:intergenic | 45.0% |
| TGAGTTGCCATGATAGATGG+TGG | - | tig0019197:163281-163300 | None:intergenic | 45.0% | |
| CAACGAAGACAAGGGCTTTA+TGG | + | tig0019197:163422-163441 | Msa1371410:CDS | 45.0% | |
| AATTGTCTGTGAGGATGGAG+TGG | + | tig0019197:163707-163726 | Msa1371410:intron | 45.0% | |
| !! | GAATTGTGTAGAGAGGCATC+GGG | - | tig0019197:164021-164040 | None:intergenic | 45.0% |
| GCAGGTAGAATTGTGTAGAG+AGG | - | tig0019197:164028-164047 | None:intergenic | 45.0% | |
| ! | TCCCTTGCTGTCACATATCA+AGG | + | tig0019197:164116-164135 | Msa1371410:intron | 45.0% |
| TCAAGTGAGCAAGAGAAGTG+AGG | - | tig0019197:164189-164208 | None:intergenic | 45.0% | |
| GAGAAAGCCTTGGAACCAAA+AGG | + | tig0019197:164441-164460 | Msa1371410:CDS | 45.0% | |
| TTATTCCTCCTCCCATTCAG+TGG | + | tig0019197:164540-164559 | Msa1371410:intron | 45.0% | |
| AATTACCACCACTGAATGGG+AGG | - | tig0019197:164551-164570 | None:intergenic | 45.0% | |
| ! | AGTTTGAAAGCGTGACTTCG+GGG | - | tig0019197:164631-164650 | None:intergenic | 45.0% |
| ! | GAGTTTGAAAGCGTGACTTC+GGG | - | tig0019197:164632-164651 | None:intergenic | 45.0% |
| AATAAGAAGGTTCGGCGACT+GGG | + | tig0019197:164652-164671 | Msa1371410:CDS | 45.0% | |
| TATTGTGTCTCTTGCCAGCT+TGG | - | tig0019197:164914-164933 | None:intergenic | 45.0% | |
| ATAGTCCTCACCTTACAAGC+CGG | + | tig0019197:165086-165105 | Msa1371410:intron | 45.0% | |
| !! | TCACCTTACAAGCCGGTTTT+GGG | + | tig0019197:165093-165112 | Msa1371410:intron | 45.0% |
| CTGTGAGAAAACCTTAGGCA+AGG | + | tig0019197:165335-165354 | Msa1371410:intron | 45.0% | |
| ! | CACCGAGCCTCTAAAAACTA+TGG | + | tig0019197:165390-165409 | Msa1371410:intron | 45.0% |
| !! | GCCCATAGTTTTTAGAGGCT+CGG | - | tig0019197:165395-165414 | None:intergenic | 45.0% |
| GTGATTCTTTCAATGGGGGT+GGG | - | tig0019197:165436-165455 | None:intergenic | 45.0% | |
| TGTGATTCTTTCAATGGGGG+TGG | - | tig0019197:165437-165456 | None:intergenic | 45.0% | |
| GTAGGAAAGGGGAAAACGAA+TGG | - | tig0019197:165481-165500 | None:intergenic | 45.0% | |
| ACATTCCAAACGACACCGTT+AGG | + | tig0019197:165513-165532 | Msa1371410:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | + | tig0019197:165674-165693 | Msa1371410:intron | 45.0% | |
| GGTTTCAATAGCCTAAGGTC+AGG | - | tig0019197:165706-165725 | None:intergenic | 45.0% | |
| CGTGTGGTTTCAATAGCCTA+AGG | - | tig0019197:165711-165730 | None:intergenic | 45.0% | |
| AAAAGGACGTGGTACTGTTC+TGG | + | tig0019197:166211-166230 | Msa1371410:intron | 45.0% | |
| !! | CACCCCGGTTTTGTATAGTT+GGG | + | tig0019197:166587-166606 | Msa1371410:intron | 45.0% |
| TAGCCTATCCTAGAACCGTT+AGG | + | tig0019197:166642-166661 | Msa1371410:intron | 45.0% | |
| ! | TGTGGAAACTTGATAGCAGG+TGG | - | tig0019197:166668-166687 | None:intergenic | 45.0% |
| CACGCTTCAGATGTGAATCT+TGG | + | tig0019197:166695-166714 | Msa1371410:intron | 45.0% | |
| CTCTTAACACACACACACTC+AGG | - | tig0019197:166722-166741 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCAGAT+TGG | + | tig0019197:166730-166749 | Msa1371410:intron | 45.0% | |
| CGAGTGAGTCTCCCAAAATA+TGG | + | tig0019197:166899-166918 | Msa1371410:intron | 45.0% | |
| GATGCAGGCTGTTCTTCTAA+AGG | + | tig0019197:167083-167102 | Msa1371410:intron | 45.0% | |
| ! | TCACAGAATTGCTGTTCGGT+AGG | + | tig0019197:167145-167164 | Msa1371410:intron | 45.0% |
| ! | CACAGAATTGCTGTTCGGTA+GGG | + | tig0019197:167146-167165 | Msa1371410:intron | 45.0% |
| TCGGTAGGGAGAATTGAAGT+AGG | + | tig0019197:167160-167179 | Msa1371410:intron | 45.0% | |
| TCTGGATGTGCATTTAGTGG+GGG | - | tig0019197:167283-167302 | None:intergenic | 45.0% | |
| CTCTGGATGTGCATTTAGTG+GGG | - | tig0019197:167284-167303 | None:intergenic | 45.0% | |
| ! | GCTCTGGATGTGCATTTAGT+GGG | - | tig0019197:167285-167304 | None:intergenic | 45.0% |
| !! | AGCTCTGGATGTGCATTTAG+TGG | - | tig0019197:167286-167305 | None:intergenic | 45.0% |
| ACATCCAGAGCTCCAAAGTA+TGG | + | tig0019197:167294-167313 | Msa1371410:intron | 45.0% | |
| !! | TTGACCATACTTTGGAGCTC+TGG | - | tig0019197:167301-167320 | None:intergenic | 45.0% |
| AACTCAAAGAAAGCCGGCAA+AGG | - | tig0019197:167452-167471 | None:intergenic | 45.0% | |
| ! | TTTAGGGTATGTTGCGATGG+AGG | + | tig0019197:167944-167963 | Msa1371410:intron | 45.0% |
| TTAGGGTATGTTGCGATGGA+GGG | + | tig0019197:167945-167964 | Msa1371410:intron | 45.0% | |
| ! | TATGTTGCGATGGAGGGTTT+TGG | + | tig0019197:167951-167970 | Msa1371410:intron | 45.0% |
| ! | AGAACAATGGAGGCTCTAGT+GGG | - | tig0019197:168172-168191 | None:intergenic | 45.0% |
| ! | AAGAACAATGGAGGCTCTAG+TGG | - | tig0019197:168173-168192 | None:intergenic | 45.0% |
| AGTTGAAGTGACACCCTTTG+AGG | - | tig0019197:168238-168257 | None:intergenic | 45.0% | |
| !! | GTGTCACTTCAACTTTCTCC+CGG | + | tig0019197:168244-168263 | Msa1371410:intron | 45.0% |
| !! | ATTTAAATAAATAAAACAAA+CGG | - | tig0019197:162618-162637 | None:intergenic | 5.0% |
| !! | TAATTAATAAATTTAATGAA+TGG | + | tig0019197:164566-164585 | Msa1371410:intron | 5.0% |
| !! | TAATTGTAAATATTAAAAAA+AGG | + | tig0019197:166194-166213 | Msa1371410:intron | 5.0% |
| !! | ATATAATAATAATATATCAA+TGG | + | tig0019197:166498-166517 | Msa1371410:intron | 5.0% |
| CTCTTCTCTTGCCGCTAGTT+AGG | + | tig0019197:162226-162245 | Msa1371410:five_prime_UTR | 50.0% | |
| TTTGATTCACCCAGTGCTGC+TGG | + | tig0019197:162491-162510 | Msa1371410:CDS | 50.0% | |
| ! | TTGATTCACCCAGTGCTGCT+GGG | + | tig0019197:162492-162511 | Msa1371410:CDS | 50.0% |
| CCATATAACCCAGCAGCACT+GGG | - | tig0019197:162503-162522 | None:intergenic | 50.0% | |
| ! | CCAGTGCTGCTGGGTTATAT+GGG | + | tig0019197:162501-162520 | Msa1371410:CDS | 50.0% |
| ! | CAGTGCTGCTGGGTTATATG+GGG | + | tig0019197:162502-162521 | Msa1371410:CDS | 50.0% |
| CTGCCTACCACCATCTATCA+TGG | + | tig0019197:163271-163290 | Msa1371410:intron | 50.0% | |
| CACGCTGCCACAAAACAACA+CGG | - | tig0019197:163497-163516 | None:intergenic | 50.0% | |
| TGCTCTGGCAATTGTCTGTG+AGG | + | tig0019197:163698-163717 | Msa1371410:intron | 50.0% | |
| CTGGCAATTGTCTGTGAGGA+TGG | + | tig0019197:163702-163721 | Msa1371410:intron | 50.0% | |
| TGTGAGGATGGAGTGGAGTA+GGG | + | tig0019197:163714-163733 | Msa1371410:intron | 50.0% | |
| ACAGCAAGGGAAGAAGAGTG+AGG | - | tig0019197:164107-164126 | None:intergenic | 50.0% | |
| ATTAGTGAGGTCAGTGGGAC+TGG | + | tig0019197:164418-164437 | Msa1371410:CDS | 50.0% | |
| TTAGTGAGGTCAGTGGGACT+GGG | + | tig0019197:164419-164438 | Msa1371410:CDS | 50.0% | |
| !!! | CCAGTTCCCTTTTGGTTCCA+AGG | - | tig0019197:164451-164470 | None:intergenic | 50.0% |
| CCTTGGAACCAAAAGGGAAC+TGG | + | tig0019197:164448-164467 | Msa1371410:CDS | 50.0% | |
| ! | TTGCTCGACCAGTTCCCTTT+TGG | - | tig0019197:164459-164478 | None:intergenic | 50.0% |
| AAAAGGGAACTGGTCGAGCA+AGG | + | tig0019197:164458-164477 | Msa1371410:CDS | 50.0% | |
| GGAGGAGGAATAAAATGGGC+TGG | - | tig0019197:164533-164552 | None:intergenic | 50.0% | |
| CAATAAGAAGGTTCGGCGAC+TGG | + | tig0019197:164651-164670 | Msa1371410:CDS | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | tig0019197:165094-165113 | None:intergenic | 50.0% |
| !! | CTCACCTTACAAGCCGGTTT+TGG | + | tig0019197:165092-165111 | Msa1371410:intron | 50.0% |
| GAGAAAACCTTAGGCAAGGC+CGG | + | tig0019197:165339-165358 | Msa1371410:intron | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | + | tig0019197:165486-165505 | Msa1371410:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | - | tig0019197:165492-165511 | None:intergenic | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | - | tig0019197:165493-165512 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | - | tig0019197:165494-165513 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | - | tig0019197:165499-165518 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | tig0019197:165684-165703 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | tig0019197:165687-165706 | None:intergenic | 50.0% | |
| CCAACTATACAAAACCGGGG+TGG | - | tig0019197:166589-166608 | None:intergenic | 50.0% | |
| !! | CCACCCCGGTTTTGTATAGT+TGG | + | tig0019197:166586-166605 | Msa1371410:intron | 50.0% |
| !! | TGGCCTAACGGTTCTAGGAT+AGG | - | tig0019197:166648-166667 | None:intergenic | 50.0% |
| ! | CTTGATAGCAGGTGGCCTAA+CGG | - | tig0019197:166660-166679 | None:intergenic | 50.0% |
| ! | TCTGAAGCGTGACCTGATTG+TGG | - | tig0019197:166686-166705 | None:intergenic | 50.0% |
| AAAGGACAGCTGATGCAGTG+CGG | - | tig0019197:167434-167453 | None:intergenic | 50.0% | |
| !!! | TTGCGATGGAGGGTTTTGGA+GGG | + | tig0019197:167955-167974 | Msa1371410:intron | 50.0% |
| ! | CACCCTTTGAGGAGAAGATG+AGG | - | tig0019197:168227-168246 | None:intergenic | 50.0% |
| TTGAACAGTGAAGCGGCGAT+AGG | - | tig0019197:168339-168358 | None:intergenic | 50.0% | |
| CAAGAGCTCCGAGAACCAAC+AGG | - | tig0019197:162173-162192 | None:intergenic | 55.0% | |
| ! | CCCAGTGCTGCTGGGTTATA+TGG | + | tig0019197:162500-162519 | Msa1371410:CDS | 55.0% |
| CCCATATAACCCAGCAGCAC+TGG | - | tig0019197:162504-162523 | None:intergenic | 55.0% | |
| TCACGCTCAGATGTTGCGAG+AGG | - | tig0019197:162720-162739 | None:intergenic | 55.0% | |
| TTATGCTGCAGGGCTCTGTC+AGG | + | tig0019197:163371-163390 | Msa1371410:intron | 55.0% | |
| CTGTGAGGATGGAGTGGAGT+AGG | + | tig0019197:163713-163732 | Msa1371410:intron | 55.0% | |
| GTGAGGATGGAGTGGAGTAG+GGG | + | tig0019197:163715-163734 | Msa1371410:intron | 55.0% | |
| TGAGGATGGAGTGGAGTAGG+GGG | + | tig0019197:163716-163735 | Msa1371410:intron | 55.0% | |
| ATGGAGTGGAGTAGGGGGTT+GGG | + | tig0019197:163721-163740 | Msa1371410:intron | 55.0% | |
| !! | GTGTAGAGAGGCATCGGGTA+GGG | - | tig0019197:164016-164035 | None:intergenic | 55.0% |
| !! | TGTGTAGAGAGGCATCGGGT+AGG | - | tig0019197:164017-164036 | None:intergenic | 55.0% |
| GAACTGGTCGAGCAAGGCAT+GGG | + | tig0019197:164464-164483 | Msa1371410:CDS | 55.0% | |
| CAAGGCATGGGTCATTGCGT+GGG | + | tig0019197:164476-164495 | Msa1371410:CDS | 55.0% | |
| TTCCTCCTCCCATTCAGTGG+TGG | + | tig0019197:164543-164562 | Msa1371410:intron | 55.0% | |
| TACCACCACTGAATGGGAGG+AGG | - | tig0019197:164548-164567 | None:intergenic | 55.0% | |
| GAATGGCAACAGTTCAGGGG+TGG | + | tig0019197:164583-164602 | Msa1371410:intron | 55.0% | |
| AAAGCGTGACTTCGGGGCTT+AGG | - | tig0019197:164625-164644 | None:intergenic | 55.0% | |
| AGCTCGTGCAGCAGAAGGAA+AGG | + | tig0019197:164693-164712 | Msa1371410:CDS | 55.0% | |
| !! | CCACCCAAAACCGGCTTGTA+AGG | - | tig0019197:165099-165118 | None:intergenic | 55.0% |
| !!! | CCTTACAAGCCGGTTTTGGG+TGG | + | tig0019197:165096-165115 | Msa1371410:intron | 55.0% |
| TTCTTGCACTCCCCAAGGTC+CGG | - | tig0019197:165361-165380 | None:intergenic | 55.0% | |
| ATAGGAACGGCCCTGACCTT+AGG | + | tig0019197:165692-165711 | Msa1371410:intron | 55.0% | |
| ! | CATTGAAGAGTGGAGGCGTG+TGG | - | tig0019197:165727-165746 | None:intergenic | 55.0% |
| CACACGCCTCCACTCTTCAA+TGG | + | tig0019197:165725-165744 | Msa1371410:intron | 55.0% | |
| AGGACGTGGTACTGTTCTGG+TGG | + | tig0019197:166214-166233 | Msa1371410:intron | 55.0% | |
| GTGCATGGTAAATGCCACCC+CGG | + | tig0019197:166572-166591 | Msa1371410:intron | 55.0% | |
| AAGGACAGCTGATGCAGTGC+GGG | - | tig0019197:167433-167452 | None:intergenic | 55.0% | |
| CTGCATCAGCTGTCCTTTGC+CGG | + | tig0019197:167436-167455 | Msa1371410:intron | 55.0% | |
| !! | GTTGCGATGGAGGGTTTTGG+AGG | + | tig0019197:167954-167973 | Msa1371410:intron | 55.0% |
| !!! | TGCGATGGAGGGTTTTGGAG+GGG | + | tig0019197:167956-167975 | Msa1371410:intron | 55.0% |
| !!! | ATGGAGGGTTTTGGAGGGGA+GGG | + | tig0019197:167960-167979 | Msa1371410:intron | 55.0% |
| ! | GGAGGCTCTAGTGGGAAAAG+TGG | - | tig0019197:168164-168183 | None:intergenic | 55.0% |
| ATCAAAGCAGCGCCGTGCCA+AGG | - | tig0019197:162477-162496 | None:intergenic | 60.0% | |
| GCAGCGTGCAAAACGCCAAC+AGG | + | tig0019197:163509-163528 | Msa1371410:CDS | 60.0% | |
| GATGGAGTGGAGTAGGGGGT+TGG | + | tig0019197:163720-163739 | Msa1371410:intron | 60.0% | |
| !! | AGAGAGGCATCGGGTAGGGT+TGG | - | tig0019197:164012-164031 | None:intergenic | 60.0% |
| CAGAGGGCGGAAAAGACGCA+AGG | - | tig0019197:164050-164069 | None:intergenic | 60.0% | |
| GTGGGACTGGGAGAAAGCCT+TGG | + | tig0019197:164431-164450 | Msa1371410:CDS | 60.0% | |
| GGAACTGGTCGAGCAAGGCA+TGG | + | tig0019197:164463-164482 | Msa1371410:CDS | 60.0% | |
| GCAAGGCATGGGTCATTGCG+TGG | + | tig0019197:164475-164494 | Msa1371410:CDS | 60.0% | |
| AGGGGTGGTGAAGCGAAGCA+TGG | + | tig0019197:164598-164617 | Msa1371410:CDS | 60.0% | |
| CTGTCAGCTCGTGCAGCAGA+AGG | + | tig0019197:164688-164707 | Msa1371410:CDS | 60.0% | |
| GTGTCTCTTGCCAGCTTGGC+TGG | - | tig0019197:164910-164929 | None:intergenic | 60.0% | |
| CTTAGGCAAGGCCGGACCTT+GGG | + | tig0019197:165347-165366 | Msa1371410:intron | 60.0% | |
| TTAGGCAAGGCCGGACCTTG+GGG | + | tig0019197:165348-165367 | Msa1371410:intron | 60.0% | |
| AGCGCTTCTTGCACTCCCCA+AGG | - | tig0019197:165366-165385 | None:intergenic | 60.0% | |
| GCAGGTGGCCTAACGGTTCT+AGG | - | tig0019197:166653-166672 | None:intergenic | 60.0% | |
| !!! | GATGGAGGGTTTTGGAGGGG+AGG | + | tig0019197:167959-167978 | Msa1371410:intron | 60.0% |
| GGGCGGAAAAGACGCAAGGC+AGG | - | tig0019197:164046-164065 | None:intergenic | 65.0% | |
| TGGGTCATTGCGTGGGCCTC+AGG | + | tig0019197:164483-164502 | Msa1371410:CDS | 65.0% | |
| CCAAGGTCCGGCCTTGCCTA+AGG | - | tig0019197:165349-165368 | None:intergenic | 65.0% | |
| CCTTAGGCAAGGCCGGACCT+TGG | + | tig0019197:165346-165365 | Msa1371410:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019197 | gene | 162126 | 168943 | 162126 | ID=Msa1371410;Name=Msa1371410 |
| tig0019197 | mRNA | 162126 | 168943 | 162126 | ID=Msa1371410-mRNA-1;Parent=Msa1371410;Name=Msa1371410-mRNA-1;_AED=0.08;_eAED=0.08;_QI=137|1|1|1|0.85|0.87|8|235|297 |
| tig0019197 | exon | 162126 | 162247 | 162126 | ID=Msa1371410-mRNA-1:exon:2155;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 162416 | 162553 | 162416 | ID=Msa1371410-mRNA-1:exon:2156;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 162642 | 162744 | 162642 | ID=Msa1371410-mRNA-1:exon:2157;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 163382 | 163530 | 163382 | ID=Msa1371410-mRNA-1:exon:2158;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 164397 | 164504 | 164397 | ID=Msa1371410-mRNA-1:exon:2159;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 164595 | 164714 | 164595 | ID=Msa1371410-mRNA-1:exon:2160;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 167691 | 167864 | 167691 | ID=Msa1371410-mRNA-1:exon:2161;Parent=Msa1371410-mRNA-1 |
| tig0019197 | exon | 168592 | 168943 | 168592 | ID=Msa1371410-mRNA-1:exon:2162;Parent=Msa1371410-mRNA-1 |
| tig0019197 | five_prime_UTR | 162126 | 162247 | 162126 | ID=Msa1371410-mRNA-1:five_prime_utr;Parent=Msa1371410-mRNA-1 |
| tig0019197 | five_prime_UTR | 162416 | 162430 | 162416 | ID=Msa1371410-mRNA-1:five_prime_utr;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 162431 | 162553 | 162431 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 162642 | 162744 | 162642 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 163382 | 163530 | 163382 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 164397 | 164504 | 164397 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 164595 | 164714 | 164595 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 167691 | 167864 | 167691 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | CDS | 168592 | 168708 | 168592 | ID=Msa1371410-mRNA-1:cds;Parent=Msa1371410-mRNA-1 |
| tig0019197 | three_prime_UTR | 168709 | 168943 | 168709 | ID=Msa1371410-mRNA-1:three_prime_utr;Parent=Msa1371410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
