Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415620 | sp|B6IRQ7|RL4_RHOCS | 50.990 | 202 | 98 | 1 | 85 | 286 | 5 | 205 | 2.54e-62 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415620 | G7JBP6 | 97.333 | 300 | 5 | 1 | 1 | 297 | 48 | 347 | 0.0 | 598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040220 | Msa1415620 | 0.841423 | 4.795057e-58 | -8.615850e-47 |
| Msa0047650 | Msa1415620 | 0.808620 | 2.831367e-50 | -8.615850e-47 |
| Msa0087910 | Msa1415620 | 0.835976 | 1.226260e-56 | -8.615850e-47 |
| Msa0114600 | Msa1415620 | 0.825138 | 5.518762e-54 | -8.615850e-47 |
| Msa1353300 | Msa1415620 | 0.807899 | 4.034701e-50 | -8.615850e-47 |
| Msa1367540 | Msa1415620 | 0.813192 | 2.898228e-51 | -8.615850e-47 |
| Msa1371410 | Msa1415620 | 0.995649 | 2.029136e-218 | -8.615850e-47 |
| Msa1385480 | Msa1415620 | 0.823651 | 1.235062e-53 | -8.615850e-47 |
| Msa1415620 | Msa1424570 | 0.810102 | 1.362242e-50 | -8.615850e-47 |
| Msa1415620 | Msa1450560 | 0.847616 | 1.033328e-59 | -8.615850e-47 |
| Msa1415620 | Msa1463570 | 0.805222 | 1.481157e-49 | -8.615850e-47 |
| Msa1415620 | Msa1465700 | 0.831777 | 1.377280e-55 | -8.615850e-47 |
| Msa0602900 | Msa1415620 | 0.846361 | 2.279029e-59 | -8.615850e-47 |
| Msa0605890 | Msa1415620 | 0.812303 | 4.537030e-51 | -8.615850e-47 |
| Msa0643960 | Msa1415620 | 0.851132 | 1.082818e-60 | -8.615850e-47 |
| Msa0648620 | Msa1415620 | 0.836900 | 7.133945e-57 | -8.615850e-47 |
| Msa0648670 | Msa1415620 | 0.845885 | 3.071250e-59 | -8.615850e-47 |
| Msa0694400 | Msa1415620 | 0.818740 | 1.673937e-52 | -8.615850e-47 |
| Msa0708630 | Msa1415620 | 0.820491 | 6.670108e-53 | -8.615850e-47 |
| Msa0748350 | Msa1415620 | 0.822847 | 1.902472e-53 | -8.615850e-47 |
| Msa0790450 | Msa1415620 | 0.845739 | 3.365022e-59 | -8.615850e-47 |
| Msa0128330 | Msa1415620 | 0.806190 | 9.278901e-50 | -8.615850e-47 |
| Msa0132460 | Msa1415620 | 0.820060 | 8.372517e-53 | -8.615850e-47 |
| Msa0134580 | Msa1415620 | 0.850446 | 1.689522e-60 | -8.615850e-47 |
| Msa0167860 | Msa1415620 | 0.814808 | 1.275675e-51 | -8.615850e-47 |
| Msa0174580 | Msa1415620 | 0.801760 | 7.733171e-49 | -8.615850e-47 |
| Msa0182050 | Msa1415620 | 0.821663 | 3.581296e-53 | -8.615850e-47 |
| Msa0182100 | Msa1415620 | 0.814812 | 1.273218e-51 | -8.615850e-47 |
| Msa0188740 | Msa1415620 | 0.817255 | 3.625071e-52 | -8.615850e-47 |
| Msa0192300 | Msa1415620 | 0.811282 | 7.569780e-51 | -8.615850e-47 |
| Msa0192490 | Msa1415620 | 0.821276 | 4.401626e-53 | -8.615850e-47 |
| Msa0194940 | Msa1415620 | 0.835138 | 1.997375e-56 | -8.615850e-47 |
| Msa0223240 | Msa1415620 | 0.808928 | 2.433876e-50 | -8.615850e-47 |
| Msa0234850 | Msa1415620 | 0.818956 | 1.495589e-52 | -8.615850e-47 |
| Msa0234900 | Msa1415620 | 0.801221 | 9.973073e-49 | -8.615850e-47 |
| Msa0237180 | Msa1415620 | 0.800141 | 1.656792e-48 | -8.615850e-47 |
| Msa1235950 | Msa1415620 | 0.832656 | 8.346851e-56 | -8.615850e-47 |
| Msa1235980 | Msa1415620 | 0.837374 | 5.398189e-57 | -8.615850e-47 |
| Msa1237040 | Msa1415620 | 0.843454 | 1.387323e-58 | -8.615850e-47 |
| Msa1258540 | Msa1415620 | 0.828793 | 7.377802e-55 | -8.615850e-47 |
| Msa1278130 | Msa1415620 | 0.801554 | 8.525660e-49 | -8.615850e-47 |
| Msa1284060 | Msa1415620 | 0.823826 | 1.123787e-53 | -8.615850e-47 |
| Msa1317390 | Msa1415620 | 0.814745 | 1.317329e-51 | -8.615850e-47 |
| Msa1332230 | Msa1415620 | 0.802457 | 5.560542e-49 | -8.615850e-47 |
| Msa1333370 | Msa1415620 | 0.842472 | 2.532444e-58 | -8.615850e-47 |
| Msa1341780 | Msa1415620 | 0.891910 | 2.580150e-74 | -8.615850e-47 |
| Msa0382950 | Msa1415620 | 0.909713 | 4.198879e-82 | -8.615850e-47 |
| Msa0382960 | Msa1415620 | 0.886620 | 2.919096e-72 | -8.615850e-47 |
| Msa0426090 | Msa1415620 | 0.814938 | 1.193926e-51 | -8.615850e-47 |
| Msa0426250 | Msa1415620 | 0.836834 | 7.419351e-57 | -8.615850e-47 |
| Msa0432750 | Msa1415620 | 0.997824 | 5.768905e-250 | -8.615850e-47 |
| Msa0472480 | Msa1415620 | 0.810602 | 1.062573e-50 | -8.615850e-47 |
| Msa0475810 | Msa1415620 | 0.815138 | 1.077786e-51 | -8.615850e-47 |
| Msa0479980 | Msa1415620 | 0.996422 | 2.523934e-227 | -8.615850e-47 |
| Msa1004780 | Msa1415620 | 0.801455 | 8.930221e-49 | -8.615850e-47 |
| Msa1025200 | Msa1415620 | 0.837723 | 4.392754e-57 | -8.615850e-47 |
| Msa1025220 | Msa1415620 | 0.823889 | 1.086189e-53 | -8.615850e-47 |
| Msa1047020 | Msa1415620 | 0.824793 | 6.657376e-54 | -8.615850e-47 |
| Msa1050100 | Msa1415620 | 0.821497 | 3.913282e-53 | -8.615850e-47 |
| Msa1085850 | Msa1415620 | 0.804846 | 1.775687e-49 | -8.615850e-47 |
| Msa0270160 | Msa1415620 | 0.815740 | 7.917570e-52 | -8.615850e-47 |
| Msa0277600 | Msa1415620 | 0.849965 | 2.304679e-60 | -8.615850e-47 |
| Msa0301250 | Msa1415620 | 0.815440 | 9.233007e-52 | -8.615850e-47 |
| Msa0313060 | Msa1415620 | 0.830359 | 3.070771e-55 | -8.615850e-47 |
| Msa0315430 | Msa1415620 | 0.843648 | 1.230965e-58 | -8.615850e-47 |
| Msa0340560 | Msa1415620 | 0.824362 | 8.410425e-54 | -8.615850e-47 |
| Msa0363320 | Msa1415620 | 0.810454 | 1.143379e-50 | -8.615850e-47 |
| Msa1116940 | Msa1415620 | 0.876997 | 8.946242e-69 | -8.615850e-47 |
| Msa1136880 | Msa1415620 | 0.868632 | 5.650756e-66 | -8.615850e-47 |
| Msa1219760 | Msa1415620 | 0.839176 | 1.852880e-57 | -8.615850e-47 |
| Msa0529900 | Msa1415620 | 0.808333 | 3.260456e-50 | -8.615850e-47 |
| Msa0547920 | Msa1415620 | 0.859511 | 3.931391e-63 | -8.615850e-47 |
| Msa0554210 | Msa1415620 | 0.839170 | 1.859566e-57 | -8.615850e-47 |
| Msa0573550 | Msa1415620 | 0.815354 | 9.653231e-52 | -8.615850e-47 |
| Msa0929700 | Msa1415620 | 0.834038 | 3.776808e-56 | -8.615850e-47 |
| Msa0930890 | Msa1415620 | 0.818531 | 1.867124e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415620 | MtrunA17_Chr3g0138321 | 97.333 | 300 | 5 | 1 | 1 | 297 | 1 | 300 | 0.0 | 596 |
| Msa1415620 | MtrunA17_Chr8g0335501 | 36.715 | 207 | 125 | 4 | 78 | 280 | 50 | 254 | 2.98e-29 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1415620 | AT2G20060.1 | 67.320 | 306 | 78 | 4 | 1 | 291 | 1 | 299 | 3.72e-146 | 412 |
| Msa1415620 | AT1G07320.2 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 3.84e-20 | 88.6 |
| Msa1415620 | AT1G07320.1 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 3.96e-20 | 88.6 |
| Msa1415620 | AT1G07320.4 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 4.07e-20 | 88.2 |
| Msa1415620 | AT1G07320.3 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 4.07e-20 | 88.2 |
Find 92 sgRNAs with CRISPR-Local
Find 479 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTACCTCAACCATTTATT+TGG | 0.072403 | tig0024251:-54069 | None:intergenic |
| CAACGAAGACAAGGGCTTTA+TGG | 0.163918 | tig0024251:+48729 | Msa1415620:CDS |
| CCCAGTGCTGCTGGGTTATA+TGG | 0.172532 | tig0024251:+47806 | Msa1415620:CDS |
| TTATTTGGGTGTGGATTTAT+TGG | 0.194249 | tig0024251:-54054 | None:intergenic |
| TGTTTCGGAGAGATGGGTTT+TGG | 0.215248 | tig0024251:-47445 | None:intergenic |
| GCTTCTAGTGTTTGAGGATT+TGG | 0.223422 | tig0024251:+53058 | Msa1415620:intron |
| CAAGATTAAAACTTAGGATT+TGG | 0.270503 | tig0024251:+54243 | Msa1415620:three_prime_UTR |
| CTCAAATGGTTAAGTTGTTA+TGG | 0.283472 | tig0024251:+54283 | Msa1415620:three_prime_UTR |
| TAAATCCACACCCAAATAAA+TGG | 0.297256 | tig0024251:+54058 | Msa1415620:exon |
| AATTCTGTTCACAGCATCTT+TGG | 0.299153 | tig0024251:-54006 | None:intergenic |
| TTTGATTCACCCAGTGCTGC+TGG | 0.304551 | tig0024251:+47797 | Msa1415620:CDS |
| TTGCTCGACCAGTTCCCTTT+TGG | 0.310177 | tig0024251:-49763 | None:intergenic |
| ATCTACGATCAGAAGTTTCT+TGG | 0.323553 | tig0024251:-53138 | None:intergenic |
| ATAAGAAAGAAGTAGCCTTT+TGG | 0.327708 | tig0024251:-47753 | None:intergenic |
| CTCTTCTCTTGCCGCTAGTT+AGG | 0.347311 | tig0024251:+47526 | Msa1415620:five_prime_UTR |
| TCGTTGTGAAAGTTGGTAAC+TGG | 0.350576 | tig0024251:-48712 | None:intergenic |
| GTAGGTTGATTCTTCAGTTA+TGG | 0.350673 | tig0024251:+47718 | Msa1415620:intron |
| CCAGTGCTGCTGGGTTATAT+GGG | 0.354877 | tig0024251:+47807 | Msa1415620:CDS |
| ATTAGTGAGGTCAGTGGGAC+TGG | 0.362388 | tig0024251:+49725 | Msa1415620:CDS |
| TATACAGCTTCTAGTGTTTG+AGG | 0.367365 | tig0024251:+53052 | Msa1415620:intron |
| AACTTCATTTACTCAGGATT+AGG | 0.367891 | tig0024251:+54107 | Msa1415620:three_prime_UTR |
| CCCATATAACCCAGCAGCAC+TGG | 0.368405 | tig0024251:-47807 | None:intergenic |
| ACTTCTTTCTTATCAATCCT+TGG | 0.378210 | tig0024251:+47763 | Msa1415620:CDS |
| GGTGTGGATTTATTGGAGAT+TGG | 0.392265 | tig0024251:-54047 | None:intergenic |
| ACTACCTCAACCATTTATTT+GGG | 0.392940 | tig0024251:-54068 | None:intergenic |
| GAGTTTGAAAGCGTGACTTC+GGG | 0.393295 | tig0024251:-49936 | None:intergenic |
| GAGAACCAACAGGTTTGTTT+CGG | 0.394983 | tig0024251:-47460 | None:intergenic |
| GCAACATCTGAGCGTGATAT+AGG | 0.405707 | tig0024251:+48029 | Msa1415620:CDS |
| AAAGCGTGACTTCGGGGCTT+AGG | 0.410919 | tig0024251:-49929 | None:intergenic |
| CTCAAGCAAAATATTCTCAT+TGG | 0.412421 | tig0024251:-54169 | None:intergenic |
| TGGGTCATTGCGTGGGCCTC+AGG | 0.414756 | tig0024251:+49790 | Msa1415620:CDS |
| TTGTTTCAAGATTAAAACTT+AGG | 0.418739 | tig0024251:+54237 | Msa1415620:three_prime_UTR |
| CATTTCTGCTCACCGTATCT+TGG | 0.423638 | tig0024251:+47838 | Msa1415620:CDS |
| GGTTTCTGATAAAATTATAC+AGG | 0.430088 | tig0024251:+54191 | Msa1415620:three_prime_UTR |
| CAATAAGAAGGTTCGGCGAC+TGG | 0.432512 | tig0024251:+49958 | Msa1415620:CDS |
| CAGGTTTGTTTCGGAGAGAT+GGG | 0.433251 | tig0024251:-47451 | None:intergenic |
| CTCAACCATTTATTTGGGTG+TGG | 0.441163 | tig0024251:-54063 | None:intergenic |
| TTATGCTGCAGGGCTCTGTC+AGG | 0.442320 | tig0024251:+48678 | Msa1415620:intron |
| GAGAAAGCCTTGGAACCAAA+AGG | 0.454529 | tig0024251:+49748 | Msa1415620:CDS |
| TCTAGTGTTTGAGGATTTGG+AGG | 0.457747 | tig0024251:+53061 | Msa1415620:CDS |
| GAAACAAACCTGTTGGTTCT+CGG | 0.461567 | tig0024251:+47462 | Msa1415620:five_prime_UTR |
| TGAGTTTGAAAGCGTGACTT+CGG | 0.462197 | tig0024251:-49937 | None:intergenic |
| ACAGGTTTGTTTCGGAGAGA+TGG | 0.462323 | tig0024251:-47452 | None:intergenic |
| GCAGCGTGCAAAACGCCAAC+AGG | 0.466799 | tig0024251:+48816 | Msa1415620:CDS |
| CTTGTCTTCGTTGTGAAAGT+TGG | 0.471718 | tig0024251:-48719 | None:intergenic |
| TCAAACTCAATAAGAAGGTT+CGG | 0.474336 | tig0024251:+49951 | Msa1415620:CDS |
| CGCTTTCAAACTCAATAAGA+AGG | 0.480982 | tig0024251:+49946 | Msa1415620:CDS |
| CAGTAGAAGTAGAAAAGCGT+TGG | 0.484013 | tig0024251:-47962 | None:intergenic |
| TGAACTATATCCTTCCGAAT+AGG | 0.487787 | tig0024251:-48778 | None:intergenic |
| CCTTGGAACCAAAAGGGAAC+TGG | 0.491414 | tig0024251:+49755 | Msa1415620:CDS |
| TGGCTTCTTTCATCTCCAAA+AGG | 0.496230 | tig0024251:+47738 | Msa1415620:CDS |
| GCAAGGCATGGGTCATTGCG+TGG | 0.496788 | tig0024251:+49782 | Msa1415620:CDS |
| TTGATTCACCCAGTGCTGCT+GGG | 0.499368 | tig0024251:+47798 | Msa1415620:CDS |
| CAAGAGCTCCGAGAACCAAC+AGG | 0.505865 | tig0024251:-47470 | None:intergenic |
| GTACTAAACTTCATTTACTC+AGG | 0.508949 | tig0024251:+54101 | Msa1415620:three_prime_UTR |
| AAACTGATACTTACAATGGA+TGG | 0.519437 | tig0024251:-53224 | None:intergenic |
| CTGTCAGCTCGTGCAGCAGA+AGG | 0.521868 | tig0024251:+49995 | Msa1415620:CDS |
| CCATATAACCCAGCAGCACT+GGG | 0.532120 | tig0024251:-47806 | None:intergenic |
| ATTAAAACTTAGGATTTGGA+TGG | 0.533638 | tig0024251:+54247 | Msa1415620:three_prime_UTR |
| AATAAGAAGGTTCGGCGACT+GGG | 0.536871 | tig0024251:+49959 | Msa1415620:CDS |
| AAAGCGTTGGGTGATTGATC+CGG | 0.543562 | tig0024251:-47949 | None:intergenic |
| TTAGTGAGGTCAGTGGGACT+GGG | 0.544271 | tig0024251:+49726 | Msa1415620:CDS |
| GTGGGACTGGGAGAAAGCCT+TGG | 0.549232 | tig0024251:+49738 | Msa1415620:CDS |
| CAACTTTCACAACGAAGACA+AGG | 0.552359 | tig0024251:+48720 | Msa1415620:CDS |
| AGAAAGCCTTGGAACCAAAA+GGG | 0.558506 | tig0024251:+49749 | Msa1415620:CDS |
| GGAACTGGTCGAGCAAGGCA+TGG | 0.559028 | tig0024251:+49770 | Msa1415620:CDS |
| TTTCTTATCAATCCTTGGCA+CGG | 0.559499 | tig0024251:+47768 | Msa1415620:CDS |
| GAATGCAATGTACCAAGATA+CGG | 0.566350 | tig0024251:-47850 | None:intergenic |
| AGCTCGTGCAGCAGAAGGAA+AGG | 0.568393 | tig0024251:+50000 | Msa1415620:CDS |
| CAAGGCATGGGTCATTGCGT+GGG | 0.570939 | tig0024251:+49783 | Msa1415620:CDS |
| AGTAGAAGTAGAAAAGCGTT+GGG | 0.572426 | tig0024251:-47961 | None:intergenic |
| ATCAAAGCAGCGCCGTGCCA+AGG | 0.573221 | tig0024251:-47780 | None:intergenic |
| AAACTATTAGTGAGGTCAGT+GGG | 0.576745 | tig0024251:+49720 | Msa1415620:CDS |
| CACACCCAAATAAATGGTTG+AGG | 0.579840 | tig0024251:+54064 | Msa1415620:exon |
| CAGTGCTGCTGGGTTATATG+GGG | 0.586267 | tig0024251:+47808 | Msa1415620:CDS |
| GAACTGGTCGAGCAAGGCAT+GGG | 0.586611 | tig0024251:+49771 | Msa1415620:CDS |
| AAAAGGGAACTGGTCGAGCA+AGG | 0.599214 | tig0024251:+49765 | Msa1415620:CDS |
| ATCACTGTGTTACAGAAATG+AGG | 0.601606 | tig0024251:-54146 | None:intergenic |
| TCTCTCCGAAACAAACCTGT+TGG | 0.602751 | tig0024251:+47455 | Msa1415620:five_prime_UTR |
| AAGAGAAGAGAACATAAATG+AGG | 0.610352 | tig0024251:-47513 | None:intergenic |
| GTGTTACAGAAATGAGGACA+TGG | 0.610594 | tig0024251:-54140 | None:intergenic |
| AACTTTCACAACGAAGACAA+GGG | 0.614854 | tig0024251:+48721 | Msa1415620:CDS |
| AATGAATGGCAACAGTTCAG+GGG | 0.626239 | tig0024251:+49887 | Msa1415620:intron |
| AGGGGTGGTGAAGCGAAGCA+TGG | 0.631679 | tig0024251:+49905 | Msa1415620:CDS |
| TGTTACAGAAATGAGGACAT+GGG | 0.643485 | tig0024251:-54139 | None:intergenic |
| CACGCTGCCACAAAACAACA+CGG | 0.652436 | tig0024251:-48801 | None:intergenic |
| AAACTTCTGATCGTAGATGA+CGG | 0.659438 | tig0024251:+53143 | Msa1415620:CDS |
| GAATGGCAACAGTTCAGGGG+TGG | 0.663853 | tig0024251:+49890 | Msa1415620:intron |
| GTTACAGAAATGAGGACATG+GGG | 0.672070 | tig0024251:-54138 | None:intergenic |
| AAAACTATTAGTGAGGTCAG+TGG | 0.674538 | tig0024251:+49719 | Msa1415620:CDS |
| AGTTTGAAAGCGTGACTTCG+GGG | 0.691763 | tig0024251:-49935 | None:intergenic |
| TCACGCTCAGATGTTGCGAG+AGG | 0.692190 | tig0024251:-48023 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTTTAAGAAAGA+AGG | - | tig0024251:50060-50079 | None:intergenic | 10.0% |
| !!! | TTTATAAATTTTCATTTAAC+AGG | - | tig0024251:51103-51122 | None:intergenic | 10.0% |
| !! | GTAATTTAAAAAATTATAGT+GGG | - | tig0024251:51388-51407 | None:intergenic | 10.0% |
| !!! | CACTATAATTTTTTAAATTA+CGG | + | tig0024251:51387-51406 | Msa1415620:intron | 10.0% |
| !! | AATTTCAAATAGAAAATTTA+TGG | - | tig0024251:51437-51456 | None:intergenic | 10.0% |
| !!! | TTTTATTATAGACAATTTAA+AGG | + | tig0024251:51703-51722 | Msa1415620:intron | 10.0% |
| !!! | TTATTATTTTTCCATATTTT+GGG | - | tig0024251:52221-52240 | None:intergenic | 10.0% |
| !!! | ATTATTATTTTTCCATATTT+TGG | - | tig0024251:52222-52241 | None:intergenic | 10.0% |
| !! | TTATTTATTTAAATGTAGAC+CGG | + | tig0024251:47930-47949 | Msa1415620:intron | 15.0% |
| !! | ACTTAGATATAAATATCTTA+TGG | + | tig0024251:48257-48276 | Msa1415620:intron | 15.0% |
| !! | ACAGTTATATTGATATATAT+TGG | + | tig0024251:48353-48372 | Msa1415620:intron | 15.0% |
| !! | AAAACTTAGATTTGTATTTA+TGG | - | tig0024251:48518-48537 | None:intergenic | 15.0% |
| !! | ATCTAAGTATATTATTAATG+TGG | + | tig0024251:48651-48670 | Msa1415620:intron | 15.0% |
| !! | TATGAATATGTGATTATAAA+CGG | + | tig0024251:50368-50387 | Msa1415620:intron | 15.0% |
| !!! | GGTATTATAATTTTTTTTTG+AGG | - | tig0024251:50724-50743 | None:intergenic | 15.0% |
| !! | TTACAAAAATAAACCAATAT+GGG | - | tig0024251:51126-51145 | None:intergenic | 15.0% |
| !! | ATTACAAAAATAAACCAATA+TGG | - | tig0024251:51127-51146 | None:intergenic | 15.0% |
| !! | CGTAATTTAAAAAATTATAG+TGG | - | tig0024251:51389-51408 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTTATCCTAATA+TGG | + | tig0024251:51447-51466 | Msa1415620:intron | 15.0% |
| !! | TAAATTAACTATTCCATATT+AGG | - | tig0024251:51463-51482 | None:intergenic | 15.0% |
| !! | AATTGTCTATAATAAAAGTT+GGG | - | tig0024251:51700-51719 | None:intergenic | 15.0% |
| !! | AAATTGTCTATAATAAAAGT+TGG | - | tig0024251:51701-51720 | None:intergenic | 15.0% |
| !! | AATAACAAAAAGTTAGTTAT+AGG | + | tig0024251:51753-51772 | Msa1415620:intron | 15.0% |
| !!! | ATTATCTTAGAATTTTGATT+GGG | - | tig0024251:51924-51943 | None:intergenic | 15.0% |
| !!! | TATTATCTTAGAATTTTGAT+TGG | - | tig0024251:51925-51944 | None:intergenic | 15.0% |
| !! | ATATGGAAAAATAATAATCT+AGG | + | tig0024251:52224-52243 | Msa1415620:intron | 15.0% |
| !!! | TATAATTTTACAGCAAAAAA+AGG | - | tig0024251:52311-52330 | None:intergenic | 15.0% |
| !! | AACTCATAAAATAAAGAAAA+AGG | + | tig0024251:52768-52787 | Msa1415620:intron | 15.0% |
| !! | ATTATATGTTAAATAAGAGT+CGG | + | tig0024251:52992-53011 | Msa1415620:intron | 15.0% |
| !!! | TCTATATTTTGAAATACATT+TGG | - | tig0024251:53466-53485 | None:intergenic | 15.0% |
| !! | AAATTATGAATGAAAATATC+CGG | - | tig0024251:53634-53653 | None:intergenic | 15.0% |
| !!! | ATAAGATCAACAATATTTTA+AGG | - | tig0024251:53738-53757 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACATGTTTTTGT+AGG | + | tig0024251:53938-53957 | Msa1415620:intron | 15.0% |
| !!! | TTTTTTAACATGTTTTTGTA+GGG | + | tig0024251:53939-53958 | Msa1415620:intron | 15.0% |
| !! | AAAATAAATGAATGAGTGAA+GGG | - | tig0024251:47670-47689 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATTCAATTGT+AGG | + | tig0024251:47700-47719 | Msa1415620:intron | 20.0% |
| !! | GATATTTATATCTAAGTTAC+AGG | - | tig0024251:48254-48273 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAACATTGTCAA+AGG | - | tig0024251:48548-48567 | None:intergenic | 20.0% |
| !!! | TTTTGGACAATAAATAACTA+AGG | + | tig0024251:49071-49090 | Msa1415620:intron | 20.0% |
| !! | ATTGAAACATATACAATTCT+TGG | - | tig0024251:49119-49138 | None:intergenic | 20.0% |
| !! | AATTCTTTCATTTGTCAATT+AGG | - | tig0024251:49226-49245 | None:intergenic | 20.0% |
| !! | ATAGTCATAGGATATATAAA+GGG | - | tig0024251:49539-49558 | None:intergenic | 20.0% |
| !!! | AAACATATTGTTTCATGTTT+TGG | + | tig0024251:50180-50199 | Msa1415620:intron | 20.0% |
| !!! | ACAATATTCTTATTTCTTGT+AGG | + | tig0024251:50235-50254 | Msa1415620:intron | 20.0% |
| !! | ATGAATATGTGATTATAAAC+GGG | + | tig0024251:50369-50388 | Msa1415620:intron | 20.0% |
| !! | ATATACAAATTGCTTTAGTA+TGG | + | tig0024251:50466-50485 | Msa1415620:intron | 20.0% |
| !!! | TCTGAAAAATATTTTATGCA+GGG | + | tig0024251:50533-50552 | Msa1415620:intron | 20.0% |
| !! | AAATATTAAAGAAAGTAGCT+GGG | - | tig0024251:50618-50637 | None:intergenic | 20.0% |
| !! | AAAATATTAAAGAAAGTAGC+TGG | - | tig0024251:50619-50638 | None:intergenic | 20.0% |
| !! | ATAATTGTGATTCTTTCAAT+GGG | - | tig0024251:50751-50770 | None:intergenic | 20.0% |
| !! | AATAATTGTGATTCTTTCAA+TGG | - | tig0024251:50752-50771 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | tig0024251:50857-50876 | None:intergenic | 20.0% |
| !! | GAAAATTTATAAACCCATAT+TGG | + | tig0024251:51110-51129 | Msa1415620:intron | 20.0% |
| !!! | TTTGTAATTTTTCATGTGAA+AGG | + | tig0024251:51139-51158 | Msa1415620:intron | 20.0% |
| !!! | ATGTTTTTTCTTTTTGAAAC+TGG | + | tig0024251:51253-51272 | Msa1415620:intron | 20.0% |
| !! | TGTATTTGGTATTCAAATTA+CGG | + | tig0024251:51340-51359 | Msa1415620:intron | 20.0% |
| !!! | ATTTAAAAAATTATAGTGGG+TGG | - | tig0024251:51385-51404 | None:intergenic | 20.0% |
| !! | TAAATATTAAAAAAAGGACG+TGG | + | tig0024251:51506-51525 | Msa1415620:intron | 20.0% |
| !! | TATTATAGACAATTTAAAGG+CGG | + | tig0024251:51706-51725 | Msa1415620:intron | 20.0% |
| !! | AATATATCAATGGTTATCAA+TGG | + | tig0024251:51814-51833 | Msa1415620:intron | 20.0% |
| !! | AATGAATGTCTGTTTATAAA+TGG | + | tig0024251:52069-52088 | Msa1415620:intron | 20.0% |
| !! | ATGAATGTCTGTTTATAAAT+GGG | + | tig0024251:52070-52089 | Msa1415620:intron | 20.0% |
| !! | AGATGTTAGAATATATCATA+TGG | + | tig0024251:52563-52582 | Msa1415620:intron | 20.0% |
| !! | TACAGTTAAACTAGTATAAA+TGG | - | tig0024251:52612-52631 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGGGATAATTA+TGG | - | tig0024251:52938-52957 | None:intergenic | 20.0% |
| !! | GAAAAAATTCAAAAAGTTCT+TGG | - | tig0024251:53102-53121 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTTTCAATCAAC+TGG | + | tig0024251:53109-53128 | Msa1415620:CDS | 20.0% |
| !!! | TAACTTTAGCTTTTCATTTA+CGG | - | tig0024251:53171-53190 | None:intergenic | 20.0% |
| !! | TGATTAAGAAAATAACTATG+AGG | - | tig0024251:53506-53525 | None:intergenic | 20.0% |
| !! | AATTATGAATGAAAATATCC+GGG | - | tig0024251:53633-53652 | None:intergenic | 20.0% |
| !! | AAAAATATATGTATGAGCAA+AGG | - | tig0024251:53924-53943 | None:intergenic | 20.0% |
| !! | TTGTTTCAAGATTAAAACTT+AGG | + | tig0024251:54237-54256 | Msa1415620:three_prime_UTR | 20.0% |
| !! | AAATAAAAAACATGATGGTG+GGG | - | tig0024251:47584-47603 | None:intergenic | 25.0% |
| ! | GAAATAAAAAACATGATGGT+GGG | - | tig0024251:47585-47604 | None:intergenic | 25.0% |
| ! | TTGTAAGCAACAAAAGTTAA+CGG | - | tig0024251:47628-47647 | None:intergenic | 25.0% |
| ! | CAAAATAAATGAATGAGTGA+AGG | - | tig0024251:47671-47690 | None:intergenic | 25.0% |
| ! | GACAAACTTTAGGTATAAAA+TGG | - | tig0024251:48206-48225 | None:intergenic | 25.0% |
| !! | TCTAAAATTGAAGGAATTTG+TGG | + | tig0024251:48302-48321 | Msa1415620:intron | 25.0% |
| ! | ATATATCAATATAACTGTCG+TGG | - | tig0024251:48351-48370 | None:intergenic | 25.0% |
| ! | CATTACCTAAAAAAAAAGGT+TGG | - | tig0024251:48462-48481 | None:intergenic | 25.0% |
| ! | GATGCATTACCTAAAAAAAA+AGG | - | tig0024251:48466-48485 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGATATGCCTATT+CGG | + | tig0024251:48764-48783 | Msa1415620:CDS | 25.0% |
| !! | TGATATTTGTTACAGCTATA+TGG | - | tig0024251:48924-48943 | None:intergenic | 25.0% |
| ! | ATATAGCTGTAACAAATATC+AGG | + | tig0024251:48923-48942 | Msa1415620:intron | 25.0% |
| ! | AAAATGATTGAGTATTTCCA+CGG | - | tig0024251:48966-48985 | None:intergenic | 25.0% |
| !! | TTTATCATTTTGAATTGCTC+TGG | + | tig0024251:48990-49009 | Msa1415620:intron | 25.0% |
| ! | GACAATAAATAACTAAGGTT+TGG | + | tig0024251:49076-49095 | Msa1415620:intron | 25.0% |
| ! | TCTTTCACTTTACATATGAT+AGG | + | tig0024251:49188-49207 | Msa1415620:intron | 25.0% |
| ! | CTTTCACTTTACATATGATA+GGG | + | tig0024251:49189-49208 | Msa1415620:intron | 25.0% |
| ! | CCAGAATTTATTCTAATGTA+AGG | - | tig0024251:49252-49271 | None:intergenic | 25.0% |
| ! | CCTTACATTAGAATAAATTC+TGG | + | tig0024251:49249-49268 | Msa1415620:intron | 25.0% |
| !!! | TAGAATAAATTCTGGAATAC+TGG | + | tig0024251:49257-49276 | Msa1415620:intron | 25.0% |
| !!! | AGAATAAATTCTGGAATACT+GGG | + | tig0024251:49258-49277 | Msa1415620:intron | 25.0% |
| ! | ATAGGATATATAAAGGGAAA+AGG | - | tig0024251:49533-49552 | None:intergenic | 25.0% |
| ! | GATAGTCATAGGATATATAA+AGG | - | tig0024251:49540-49559 | None:intergenic | 25.0% |
| ! | TTCAACAAAAACTATTAGTG+AGG | + | tig0024251:49712-49731 | Msa1415620:CDS | 25.0% |
| ! | TGAATATGTGATTATAAACG+GGG | + | tig0024251:50370-50389 | Msa1415620:intron | 25.0% |
| !! | TTTCTTTCTTTTAATGTAGC+AGG | - | tig0024251:50509-50528 | None:intergenic | 25.0% |
| !! | GTCTGAAAAATATTTTATGC+AGG | + | tig0024251:50532-50551 | Msa1415620:intron | 25.0% |
| !! | AATATTTTATGCAGGGATAA+TGG | + | tig0024251:50540-50559 | Msa1415620:intron | 25.0% |
| ! | AATATTAAAGAAAGTAGCTG+GGG | - | tig0024251:50617-50636 | None:intergenic | 25.0% |
| ! | TAATTGTGATTCTTTCAATG+GGG | - | tig0024251:50750-50769 | None:intergenic | 25.0% |
| !!! | AAATTGCGTTTTGATTTTAC+TGG | + | tig0024251:50939-50958 | Msa1415620:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | - | tig0024251:50967-50986 | None:intergenic | 25.0% |
| !!! | TCGTTATCTTCTGAAAATTT+TGG | + | tig0024251:51226-51245 | Msa1415620:intron | 25.0% |
| !!! | TTTTTGAAACTGGAAAAATC+TGG | + | tig0024251:51263-51282 | Msa1415620:intron | 25.0% |
| ! | ATTTATGTGACTTTGCTTAA+GGG | + | tig0024251:51286-51305 | Msa1415620:intron | 25.0% |
| ! | CTTGAATTTGATGTTGTATT+TGG | + | tig0024251:51326-51345 | Msa1415620:intron | 25.0% |
| !! | TTTTCCAGATCTGAATTTTT+AGG | + | tig0024251:51576-51595 | Msa1415620:intron | 25.0% |
| ! | TTGATGAAGACGAATAATAA+TGG | + | tig0024251:51621-51640 | Msa1415620:intron | 25.0% |
| ! | CTATAATAAAAGTTGGGAAT+GGG | - | tig0024251:51694-51713 | None:intergenic | 25.0% |
| ! | TCTATAATAAAAGTTGGGAA+TGG | - | tig0024251:51695-51714 | None:intergenic | 25.0% |
| ! | ATTATAGACAATTTAAAGGC+GGG | + | tig0024251:51707-51726 | Msa1415620:intron | 25.0% |
| ! | ATTCATATATCATCCAATCT+GGG | - | tig0024251:52052-52071 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTCTTAGAATTT+GGG | - | tig0024251:52144-52163 | None:intergenic | 25.0% |
| ! | TATATATATATAACCGATGC+AGG | + | tig0024251:52436-52455 | Msa1415620:intron | 25.0% |
| !!! | CTATTTTGTCTCTAAAAATG+AGG | - | tig0024251:52481-52500 | None:intergenic | 25.0% |
| ! | AAACTAGTATAAATGGTTCT+AGG | - | tig0024251:52605-52624 | None:intergenic | 25.0% |
| !! | TTTTCCCTTGATTACAATTA+GGG | - | tig0024251:52748-52767 | None:intergenic | 25.0% |
| !! | TTTTTCCCTTGATTACAATT+AGG | - | tig0024251:52749-52768 | None:intergenic | 25.0% |
| !! | ATTGCAATAAGACGTTATTT+TGG | - | tig0024251:52877-52896 | None:intergenic | 25.0% |
| !! | CAATCGCAAAAAGTATAAAA+GGG | - | tig0024251:52948-52967 | None:intergenic | 25.0% |
| !! | ACAATCGCAAAAAGTATAAA+AGG | - | tig0024251:52949-52968 | None:intergenic | 25.0% |
| !!! | AACTTTAGCTTTTCATTTAC+GGG | - | tig0024251:53170-53189 | None:intergenic | 25.0% |
| ! | AAATCTTATAGAAGCAACAT+GGG | - | tig0024251:53252-53271 | None:intergenic | 25.0% |
| !! | TCTACTAGTAGATATCTTTT+AGG | + | tig0024251:53295-53314 | Msa1415620:intron | 25.0% |
| !! | CTACTAGTAGATATCTTTTA+GGG | + | tig0024251:53296-53315 | Msa1415620:intron | 25.0% |
| !! | GAAAATAACTATGAGGATTT+TGG | - | tig0024251:53499-53518 | None:intergenic | 25.0% |
| !! | TATTTTGTTGCATGATACTT+TGG | + | tig0024251:53977-53996 | Msa1415620:CDS | 25.0% |
| ! | GGTTTCTGATAAAATTATAC+AGG | + | tig0024251:54191-54210 | Msa1415620:three_prime_UTR | 25.0% |
| ! | CAAGATTAAAACTTAGGATT+TGG | + | tig0024251:54243-54262 | Msa1415620:three_prime_UTR | 25.0% |
| ! | ATTAAAACTTAGGATTTGGA+TGG | + | tig0024251:54247-54266 | Msa1415620:three_prime_UTR | 25.0% |
| !!! | GTGAAATTTTAATGCTCAAA+TGG | + | tig0024251:54269-54288 | Msa1415620:three_prime_UTR | 25.0% |
| AAGAGAAGAGAACATAAATG+AGG | - | tig0024251:47516-47535 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAAAAG+AGG | - | tig0024251:47554-47573 | None:intergenic | 30.0% | |
| !! | AATAAAAAACATGATGGTGG+GGG | - | tig0024251:47583-47602 | None:intergenic | 30.0% |
| GGAAATAAAAAACATGATGG+TGG | - | tig0024251:47586-47605 | None:intergenic | 30.0% | |
| AGCGGAAATAAAAAACATGA+TGG | - | tig0024251:47589-47608 | None:intergenic | 30.0% | |
| ! | ATAAGAAAGAAGTAGCCTTT+TGG | - | tig0024251:47756-47775 | None:intergenic | 30.0% |
| ACTTCTTTCTTATCAATCCT+TGG | + | tig0024251:47763-47782 | Msa1415620:CDS | 30.0% | |
| ! | TTTTTGGACAATAAGTCAGA+TGG | - | tig0024251:48002-48021 | None:intergenic | 30.0% |
| ATTCATGTACTACAGAATGA+TGG | - | tig0024251:48070-48089 | None:intergenic | 30.0% | |
| AATGCATTGTAGATGATCAT+TGG | - | tig0024251:48135-48154 | None:intergenic | 30.0% | |
| ! | GTATTGATCGCATTATGATT+TGG | + | tig0024251:48838-48857 | Msa1415620:intron | 30.0% |
| AAGATTTATAGCATTTCCGT+TGG | - | tig0024251:48888-48907 | None:intergenic | 30.0% | |
| ACGGAAATGCTATAAATCTT+AGG | + | tig0024251:48888-48907 | Msa1415620:intron | 30.0% | |
| ! | GCAGACAAACATTTAGATTT+TGG | + | tig0024251:49054-49073 | Msa1415620:intron | 30.0% |
| AAGACAATGAGAAAATCAGA+GGG | - | tig0024251:49373-49392 | None:intergenic | 30.0% | |
| AAAGACAATGAGAAAATCAG+AGG | - | tig0024251:49374-49393 | None:intergenic | 30.0% | |
| TATATAAAGGGAAAAGGAAG+TGG | - | tig0024251:49527-49546 | None:intergenic | 30.0% | |
| ! | ATGCTATGATTGATAGTCAT+AGG | - | tig0024251:49551-49570 | None:intergenic | 30.0% |
| TCATAGCATCTAGTAATAAG+AGG | + | tig0024251:49562-49581 | Msa1415620:intron | 30.0% | |
| !! | GTGATCAACATATAATGGAT+TGG | + | tig0024251:49586-49605 | Msa1415620:intron | 30.0% |
| ! | TTAGCTATCAAATTTTCCTG+CGG | + | tig0024251:49644-49663 | Msa1415620:intron | 30.0% |
| ATTAATTACCACCACTGAAT+GGG | - | tig0024251:49861-49880 | None:intergenic | 30.0% | |
| TATTAATTACCACCACTGAA+TGG | - | tig0024251:49862-49881 | None:intergenic | 30.0% | |
| TCAAACTCAATAAGAAGGTT+CGG | + | tig0024251:49951-49970 | Msa1415620:CDS | 30.0% | |
| TAAGAAAGAAGGCAATGATA+AGG | - | tig0024251:50049-50068 | None:intergenic | 30.0% | |
| TATGTAGTGTGAATTTACTC+TGG | + | tig0024251:50272-50291 | Msa1415620:intron | 30.0% | |
| !! | ATCTAGCTTTCAGCTAATAT+GGG | - | tig0024251:50591-50610 | None:intergenic | 30.0% |
| !! | TATCTAGCTTTCAGCTAATA+TGG | - | tig0024251:50592-50611 | None:intergenic | 30.0% |
| TTTATCTGTGAGAAAACCTT+AGG | + | tig0024251:50637-50656 | Msa1415620:intron | 30.0% | |
| AATTGTGATTCTTTCAATGG+GGG | - | tig0024251:50749-50768 | None:intergenic | 30.0% | |
| AAGAAGAAAGATGAGATTCA+TGG | - | tig0024251:51080-51099 | None:intergenic | 30.0% | |
| GATTTATGTGACTTTGCTTA+AGG | + | tig0024251:51285-51304 | Msa1415620:intron | 30.0% | |
| TTTATGTGACTTTGCTTAAG+GGG | + | tig0024251:51287-51306 | Msa1415620:intron | 30.0% | |
| !! | TAAAAAATTATAGTGGGTGG+AGG | - | tig0024251:51382-51401 | None:intergenic | 30.0% |
| TCTTCCTAAAAATTCAGATC+TGG | - | tig0024251:51583-51602 | None:intergenic | 30.0% | |
| TTATAGACAATTTAAAGGCG+GGG | + | tig0024251:51708-51727 | Msa1415620:intron | 30.0% | |
| TCAATGGATGAGAAAGTAAT+TGG | + | tig0024251:51830-51849 | Msa1415620:intron | 30.0% | |
| ATGAGAAAGTAATTGGTGTA+TGG | + | tig0024251:51837-51856 | Msa1415620:intron | 30.0% | |
| ! | ACAAATTTGTGTTTTGTGCA+TGG | + | tig0024251:51863-51882 | Msa1415620:intron | 30.0% |
| CATTCATATATCATCCAATC+TGG | - | tig0024251:52053-52072 | None:intergenic | 30.0% | |
| ! | CCTTACAAAACTAACTTGTA+AGG | - | tig0024251:52106-52125 | None:intergenic | 30.0% |
| !!! | CCTTACAAGTTAGTTTTGTA+AGG | + | tig0024251:52103-52122 | Msa1415620:intron | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | + | tig0024251:52113-52132 | Msa1415620:intron | 30.0% |
| ! | TGATTCTTAGAATTTGGGTT+GGG | - | tig0024251:52139-52158 | None:intergenic | 30.0% |
| TTGATTCTTAGAATTTGGGT+TGG | - | tig0024251:52140-52159 | None:intergenic | 30.0% | |
| !! | GCAAGTTGATTCTTAGAATT+TGG | - | tig0024251:52145-52164 | None:intergenic | 30.0% |
| TCCAAAGTATGGTCAATAAA+GGG | + | tig0024251:52673-52692 | Msa1415620:intron | 30.0% | |
| TACAATTAGGGTTACATACA+TGG | - | tig0024251:52736-52755 | None:intergenic | 30.0% | |
| TGTAACCCTAATTGTAATCA+AGG | + | tig0024251:52740-52759 | Msa1415620:intron | 30.0% | |
| GTAACCCTAATTGTAATCAA+GGG | + | tig0024251:52741-52760 | Msa1415620:intron | 30.0% | |
| !!! | GAATTTTTTCAATCAACTGG+AGG | + | tig0024251:53112-53131 | Msa1415620:CDS | 30.0% |
| !!! | ACTTTAGCTTTTCATTTACG+GGG | - | tig0024251:53169-53188 | None:intergenic | 30.0% |
| AAACTGATACTTACAATGGA+TGG | - | tig0024251:53227-53246 | None:intergenic | 30.0% | |
| GGTAAAACTGATACTTACAA+TGG | - | tig0024251:53231-53250 | None:intergenic | 30.0% | |
| GAAATCTTATAGAAGCAACA+TGG | - | tig0024251:53253-53272 | None:intergenic | 30.0% | |
| TGCTTCTATAAGATTTCTCA+TGG | + | tig0024251:53256-53275 | Msa1415620:intron | 30.0% | |
| ! | ATAACTATGAGGATTTTGGA+GGG | - | tig0024251:53495-53514 | None:intergenic | 30.0% |
| ! | AATAACTATGAGGATTTTGG+AGG | - | tig0024251:53496-53515 | None:intergenic | 30.0% |
| TCACACTTACCAACTTATTT+AGG | + | tig0024251:53562-53581 | Msa1415620:intron | 30.0% | |
| !! | TCTCCATCATTTTTGTAAGA+TGG | + | tig0024251:53850-53869 | Msa1415620:intron | 30.0% |
| GATCCATCTTACAAAAATGA+TGG | - | tig0024251:53856-53875 | None:intergenic | 30.0% | |
| TTATTTGGGTGTGGATTTAT+TGG | - | tig0024251:54057-54076 | None:intergenic | 30.0% | |
| TAAATCCACACCCAAATAAA+TGG | + | tig0024251:54058-54077 | Msa1415620:exon | 30.0% | |
| ACTACCTCAACCATTTATTT+GGG | - | tig0024251:54071-54090 | None:intergenic | 30.0% | |
| TACTACCTCAACCATTTATT+TGG | - | tig0024251:54072-54091 | None:intergenic | 30.0% | |
| GTACTAAACTTCATTTACTC+AGG | + | tig0024251:54101-54120 | Msa1415620:three_prime_UTR | 30.0% | |
| AACTTCATTTACTCAGGATT+AGG | + | tig0024251:54107-54126 | Msa1415620:three_prime_UTR | 30.0% | |
| CTCAAGCAAAATATTCTCAT+TGG | - | tig0024251:54172-54191 | None:intergenic | 30.0% | |
| ! | CAATGAGAATATTTTGCTTG+AGG | + | tig0024251:54170-54189 | Msa1415620:three_prime_UTR | 30.0% |
| ! | CTCAAATGGTTAAGTTGTTA+TGG | + | tig0024251:54283-54302 | Msa1415620:three_prime_UTR | 30.0% |
| !! | AAAAAGAGGTACCTAACTAG+CGG | - | tig0024251:47540-47559 | None:intergenic | 35.0% |
| !! | GTAGGTTGATTCTTCAGTTA+TGG | + | tig0024251:47718-47737 | Msa1415620:intron | 35.0% |
| TTTCTTATCAATCCTTGGCA+CGG | + | tig0024251:47768-47787 | Msa1415620:CDS | 35.0% | |
| GAATGCAATGTACCAAGATA+CGG | - | tig0024251:47853-47872 | None:intergenic | 35.0% | |
| !! | AGTAGAAGTAGAAAAGCGTT+GGG | - | tig0024251:47964-47983 | None:intergenic | 35.0% |
| TCTGTAGTACATGAATATGC+TGG | + | tig0024251:48074-48093 | Msa1415620:intron | 35.0% | |
| TTGCATGAGATAAAGCAGAA+AGG | - | tig0024251:48104-48123 | None:intergenic | 35.0% | |
| CTTGAGTCTTGACAAACTTT+AGG | - | tig0024251:48216-48235 | None:intergenic | 35.0% | |
| !! | TGCTTCTGCTCTAAAATTGA+AGG | + | tig0024251:48293-48312 | Msa1415620:intron | 35.0% |
| !!! | GTGCTCCAACCTTTTTTTTT+AGG | + | tig0024251:48454-48473 | Msa1415620:intron | 35.0% |
| CTTTGTTCTCGTTCTTGAAA+AGG | - | tig0024251:48492-48511 | None:intergenic | 35.0% | |
| !! | AACTCATCTAGTCTTGATCA+TGG | + | tig0024251:48602-48621 | Msa1415620:intron | 35.0% |
| !! | ACTCATCTAGTCTTGATCAT+GGG | + | tig0024251:48603-48622 | Msa1415620:intron | 35.0% |
| AACTTTCACAACGAAGACAA+GGG | + | tig0024251:48721-48740 | Msa1415620:CDS | 35.0% | |
| ! | TTTTGATATGCCTATTCGGA+AGG | + | tig0024251:48768-48787 | Msa1415620:CDS | 35.0% |
| TGAACTATATCCTTCCGAAT+AGG | - | tig0024251:48781-48800 | None:intergenic | 35.0% | |
| ATAATGCGATCAATACCTGT+TGG | - | tig0024251:48834-48853 | None:intergenic | 35.0% | |
| ! | ATGATTTGGAACCATTGAAC+TGG | + | tig0024251:48852-48871 | Msa1415620:intron | 35.0% |
| ! | TGATTTGGAACCATTGAACT+GGG | + | tig0024251:48853-48872 | Msa1415620:intron | 35.0% |
| TGTATTCAATTGTTGAACCG+TGG | + | tig0024251:48946-48965 | Msa1415620:intron | 35.0% | |
| !!! | TCTCATTGATTTTTGCCAAC+AGG | + | tig0024251:49682-49701 | Msa1415620:intron | 35.0% |
| !!! | CTCATTGATTTTTGCCAACA+GGG | + | tig0024251:49683-49702 | Msa1415620:intron | 35.0% |
| AAAACTATTAGTGAGGTCAG+TGG | + | tig0024251:49719-49738 | Msa1415620:CDS | 35.0% | |
| AAACTATTAGTGAGGTCAGT+GGG | + | tig0024251:49720-49739 | Msa1415620:CDS | 35.0% | |
| TAAAGAATGTTCTGTACCTG+AGG | - | tig0024251:49809-49828 | None:intergenic | 35.0% | |
| AATGGGAGGAGGAATAAAAT+GGG | - | tig0024251:49844-49863 | None:intergenic | 35.0% | |
| TTAATGAATGGCAACAGTTC+AGG | + | tig0024251:49885-49904 | Msa1415620:intron | 35.0% | |
| TAATGAATGGCAACAGTTCA+GGG | + | tig0024251:49886-49905 | Msa1415620:intron | 35.0% | |
| CGCTTTCAAACTCAATAAGA+AGG | + | tig0024251:49946-49965 | Msa1415620:CDS | 35.0% | |
| AATGATAAGGAGAGTGATAG+AGG | - | tig0024251:50036-50055 | None:intergenic | 35.0% | |
| CAATGTTAAGAGTCTCACAT+TGG | + | tig0024251:50334-50353 | Msa1415620:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | tig0024251:50840-50859 | None:intergenic | 35.0% | |
| AATAATCCATTGAAGAGTGG+AGG | - | tig0024251:51040-51059 | None:intergenic | 35.0% | |
| TGGAATAATCCATTGAAGAG+TGG | - | tig0024251:51043-51062 | None:intergenic | 35.0% | |
| AAGAAAGATGAGATTCATGG+TGG | - | tig0024251:51077-51096 | None:intergenic | 35.0% | |
| TGCTTAAGGGGTAATATGAA+TGG | + | tig0024251:51299-51318 | Msa1415620:intron | 35.0% | |
| GCAGATATGAACATTTCTTG+TGG | + | tig0024251:51547-51566 | Msa1415620:intron | 35.0% | |
| TAACCCAACTATACAAAACC+GGG | - | tig0024251:51899-51918 | None:intergenic | 35.0% | |
| CTAACCCAACTATACAAAAC+CGG | - | tig0024251:51900-51919 | None:intergenic | 35.0% | |
| ! | CAAAACTAACTTGTAAGGTG+AGG | - | tig0024251:52101-52120 | None:intergenic | 35.0% |
| CTCCAAAGTATGGTCAATAA+AGG | + | tig0024251:52672-52691 | Msa1415620:intron | 35.0% | |
| ACCCTTTATTGACCATACTT+TGG | - | tig0024251:52677-52696 | None:intergenic | 35.0% | |
| TCATTGAACTCAAAGAAAGC+CGG | - | tig0024251:52826-52845 | None:intergenic | 35.0% | |
| TATACAGCTTCTAGTGTTTG+AGG | + | tig0024251:53052-53071 | Msa1415620:intron | 35.0% | |
| !!! | AAGTTCTTGGTTTTATGCGT+GGG | - | tig0024251:53089-53108 | None:intergenic | 35.0% |
| !!! | AAAGTTCTTGGTTTTATGCG+TGG | - | tig0024251:53090-53109 | None:intergenic | 35.0% |
| ATCTACGATCAGAAGTTTCT+TGG | - | tig0024251:53141-53160 | None:intergenic | 35.0% | |
| AAACTTCTGATCGTAGATGA+CGG | + | tig0024251:53143-53162 | Msa1415620:CDS | 35.0% | |
| !! | TAACTATGAGGATTTTGGAG+GGG | - | tig0024251:53494-53513 | None:intergenic | 35.0% |
| GGAAACTCTCCTAAATAAGT+TGG | - | tig0024251:53574-53593 | None:intergenic | 35.0% | |
| TAGATTCTTCAGTCTGAGTT+TGG | + | tig0024251:53768-53787 | Msa1415620:intron | 35.0% | |
| AATTCTGTTCACAGCATCTT+TGG | - | tig0024251:54009-54028 | None:intergenic | 35.0% | |
| TGTTACAGAAATGAGGACAT+GGG | - | tig0024251:54142-54161 | None:intergenic | 35.0% | |
| ATCACTGTGTTACAGAAATG+AGG | - | tig0024251:54149-54168 | None:intergenic | 35.0% | |
| ! | GAGAACCAACAGGTTTGTTT+CGG | - | tig0024251:47463-47482 | None:intergenic | 40.0% |
| !! | GAAACAAACCTGTTGGTTCT+CGG | + | tig0024251:47462-47481 | Msa1415620:five_prime_UTR | 40.0% |
| GGCAATTTGAGCTTAACTAG+CGG | - | tig0024251:47607-47626 | None:intergenic | 40.0% | |
| TGGCTTCTTTCATCTCCAAA+AGG | + | tig0024251:47738-47757 | Msa1415620:CDS | 40.0% | |
| ! | CAGTAGAAGTAGAAAAGCGT+TGG | - | tig0024251:47965-47984 | None:intergenic | 40.0% |
| TGAGCGTGATATAGGTATGA+AGG | + | tig0024251:48037-48056 | Msa1415620:intron | 40.0% | |
| AATTGAAGGAATTTGTGGCC+AGG | + | tig0024251:48307-48326 | Msa1415620:intron | 40.0% | |
| ATTGAAGGAATTTGTGGCCA+GGG | + | tig0024251:48308-48327 | Msa1415620:intron | 40.0% | |
| AAGACCCAAAAGTTAAACCC+TGG | - | tig0024251:48328-48347 | None:intergenic | 40.0% | |
| AGATGAGTTGCCATGATAGA+TGG | - | tig0024251:48591-48610 | None:intergenic | 40.0% | |
| AATGTGGTTCATTATGCTGC+AGG | + | tig0024251:48667-48686 | Msa1415620:intron | 40.0% | |
| ATGTGGTTCATTATGCTGCA+GGG | + | tig0024251:48668-48687 | Msa1415620:intron | 40.0% | |
| !! | TCGTTGTGAAAGTTGGTAAC+TGG | - | tig0024251:48715-48734 | None:intergenic | 40.0% |
| CTTGTCTTCGTTGTGAAAGT+TGG | - | tig0024251:48722-48741 | None:intergenic | 40.0% | |
| CAACTTTCACAACGAAGACA+AGG | + | tig0024251:48720-48739 | Msa1415620:CDS | 40.0% | |
| !!! | AAGGGCTTTATGGTTTTAGC+TGG | + | tig0024251:48739-48758 | Msa1415620:CDS | 40.0% |
| !!! | TAGTTCACCGTGTTGTTTTG+TGG | + | tig0024251:48794-48813 | Msa1415620:CDS | 40.0% |
| GATTACATGTCCCAGTTCAA+TGG | - | tig0024251:48866-48885 | None:intergenic | 40.0% | |
| AACTGGGACATGTAATCCAA+CGG | + | tig0024251:48869-48888 | Msa1415620:intron | 40.0% | |
| ! | AGAATTGTGTAGAGAGGCAT+CGG | - | tig0024251:49329-49348 | None:intergenic | 40.0% |
| ACAATGAGAAAATCAGAGGG+CGG | - | tig0024251:49370-49389 | None:intergenic | 40.0% | |
| TCCTTGATATGTGACAGCAA+GGG | - | tig0024251:49427-49446 | None:intergenic | 40.0% | |
| ATCCTTGATATGTGACAGCA+AGG | - | tig0024251:49428-49447 | None:intergenic | 40.0% | |
| GAGGCGTGATCAACATATAA+TGG | + | tig0024251:49581-49600 | Msa1415620:intron | 40.0% | |
| AAAACAAGTAACATAGCCGC+AGG | - | tig0024251:49663-49682 | None:intergenic | 40.0% | |
| TTGTTGAATGAGTTCCCTGT+TGG | - | tig0024251:49700-49719 | None:intergenic | 40.0% | |
| AGAAAGCCTTGGAACCAAAA+GGG | + | tig0024251:49749-49768 | Msa1415620:CDS | 40.0% | |
| GAATGGGAGGAGGAATAAAA+TGG | - | tig0024251:49845-49864 | None:intergenic | 40.0% | |
| AATGAATGGCAACAGTTCAG+GGG | + | tig0024251:49887-49906 | Msa1415620:intron | 40.0% | |
| ! | TGAGTTTGAAAGCGTGACTT+CGG | - | tig0024251:49940-49959 | None:intergenic | 40.0% |
| TAATAGTTTACCAGCCAAGC+TGG | + | tig0024251:50204-50223 | Msa1415620:intron | 40.0% | |
| TTGTAAATGCCACCCAAAAC+CGG | - | tig0024251:50415-50434 | None:intergenic | 40.0% | |
| TAGCTTTCAGCTAATATGGG+AGG | - | tig0024251:50588-50607 | None:intergenic | 40.0% | |
| ! | ACCGAGCCTCTAAAAACTAT+GGG | + | tig0024251:50698-50717 | Msa1415620:intron | 40.0% |
| !! | TTGAGGCCCATAGTTTTTAG+AGG | - | tig0024251:50707-50726 | None:intergenic | 40.0% |
| !! | ATTTACCTAACGGTGTCGTT+TGG | - | tig0024251:50830-50849 | None:intergenic | 40.0% |
| TTCCTATGAAATAGGAGGCT+CGG | - | tig0024251:50985-51004 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | + | tig0024251:50985-51004 | Msa1415620:intron | 40.0% | |
| GTTTCAATAGCCTAAGGTCA+GGG | - | tig0024251:51011-51030 | None:intergenic | 40.0% | |
| ! | TCATGGTGGTAATGCATAAC+TGG | - | tig0024251:51063-51082 | None:intergenic | 40.0% |
| !!! | GGGGTCACTATTTTTGTTGT+TGG | + | tig0024251:51727-51746 | Msa1415620:intron | 40.0% |
| CGACAGTTCAGATCAAAAGT+TGG | - | tig0024251:51782-51801 | None:intergenic | 40.0% | |
| AACCCAACTATACAAAACCG+GGG | - | tig0024251:51898-51917 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTATAGTTGGGTT+AGG | + | tig0024251:51898-51917 | Msa1415620:intron | 40.0% |
| ! | GATTGTGGAAACTTGATAGC+AGG | - | tig0024251:51977-51996 | None:intergenic | 40.0% |
| GCTATCAAGTTTCCACAATC+AGG | + | tig0024251:51977-51996 | Msa1415620:intron | 40.0% | |
| ACGCTTCAGATGTGAATCTT+GGG | + | tig0024251:52002-52021 | Msa1415620:intron | 40.0% | |
| TTTAGAAGAACAGCCTGCAT+CGG | - | tig0024251:52452-52471 | None:intergenic | 40.0% | |
| ! | GTCTTCACAGAATTGCTGTT+CGG | + | tig0024251:52509-52528 | Msa1415620:intron | 40.0% |
| TGTTTGTGTACACTGATCTC+TGG | + | tig0024251:53019-53038 | Msa1415620:intron | 40.0% | |
| GCTTCTAGTGTTTGAGGATT+TGG | + | tig0024251:53058-53077 | Msa1415620:intron | 40.0% | |
| TCTAGTGTTTGAGGATTTGG+AGG | + | tig0024251:53061-53080 | Msa1415620:CDS | 40.0% | |
| !!! | TCTTTTAGGGTATGTTGCGA+TGG | + | tig0024251:53309-53328 | Msa1415620:intron | 40.0% |
| AAGTGTGAGAAGAACAATGG+AGG | - | tig0024251:53550-53569 | None:intergenic | 40.0% | |
| GGTAAGTGTGAGAAGAACAA+TGG | - | tig0024251:53553-53572 | None:intergenic | 40.0% | |
| TTTCCTCATCTTCTCCTCAA+AGG | + | tig0024251:53589-53608 | Msa1415620:intron | 40.0% | |
| TTCCTCATCTTCTCCTCAAA+GGG | + | tig0024251:53590-53609 | Msa1415620:intron | 40.0% | |
| AGTGAAGTTGAACAGTGAAG+CGG | - | tig0024251:53714-53733 | None:intergenic | 40.0% | |
| GGTGTGGATTTATTGGAGAT+TGG | - | tig0024251:54050-54069 | None:intergenic | 40.0% | |
| CTCAACCATTTATTTGGGTG+TGG | - | tig0024251:54066-54085 | None:intergenic | 40.0% | |
| CACACCCAAATAAATGGTTG+AGG | + | tig0024251:54064-54083 | Msa1415620:exon | 40.0% | |
| GTTACAGAAATGAGGACATG+GGG | - | tig0024251:54141-54160 | None:intergenic | 40.0% | |
| GTGTTACAGAAATGAGGACA+TGG | - | tig0024251:54143-54162 | None:intergenic | 40.0% | |
| !! | GTTTCGGAGAGATGGGTTTT+GGG | - | tig0024251:47447-47466 | None:intergenic | 45.0% |
| !! | TGTTTCGGAGAGATGGGTTT+TGG | - | tig0024251:47448-47467 | None:intergenic | 45.0% |
| ! | CAGGTTTGTTTCGGAGAGAT+GGG | - | tig0024251:47454-47473 | None:intergenic | 45.0% |
| ! | ACAGGTTTGTTTCGGAGAGA+TGG | - | tig0024251:47455-47474 | None:intergenic | 45.0% |
| TCTCTCCGAAACAAACCTGT+TGG | + | tig0024251:47455-47474 | Msa1415620:five_prime_UTR | 45.0% | |
| CATTTCTGCTCACCGTATCT+TGG | + | tig0024251:47838-47857 | Msa1415620:CDS | 45.0% | |
| !! | AAAGCGTTGGGTGATTGATC+CGG | - | tig0024251:47952-47971 | None:intergenic | 45.0% |
| ! | AGATGTTGCGAGAGGCTTTT+TGG | - | tig0024251:48018-48037 | None:intergenic | 45.0% |
| GCAACATCTGAGCGTGATAT+AGG | + | tig0024251:48029-48048 | Msa1415620:CDS | 45.0% | |
| !! | TGTGGCCAGGGTTTAACTTT+TGG | + | tig0024251:48320-48339 | Msa1415620:intron | 45.0% |
| !! | GTGGCCAGGGTTTAACTTTT+GGG | + | tig0024251:48321-48340 | Msa1415620:intron | 45.0% |
| ! | TTGCCATGATAGATGGTGGT+AGG | - | tig0024251:48584-48603 | None:intergenic | 45.0% |
| TGAGTTGCCATGATAGATGG+TGG | - | tig0024251:48588-48607 | None:intergenic | 45.0% | |
| CAACGAAGACAAGGGCTTTA+TGG | + | tig0024251:48729-48748 | Msa1415620:CDS | 45.0% | |
| AATTGTCTGTGAGGATGGAG+TGG | + | tig0024251:49014-49033 | Msa1415620:intron | 45.0% | |
| !! | GAATTGTGTAGAGAGGCATC+GGG | - | tig0024251:49328-49347 | None:intergenic | 45.0% |
| GCAGGTAGAATTGTGTAGAG+AGG | - | tig0024251:49335-49354 | None:intergenic | 45.0% | |
| ! | TCCCTTGCTGTCACATATCA+AGG | + | tig0024251:49423-49442 | Msa1415620:intron | 45.0% |
| TCAAGTGAGCAAGAGAAGTG+AGG | - | tig0024251:49496-49515 | None:intergenic | 45.0% | |
| GAGAAAGCCTTGGAACCAAA+AGG | + | tig0024251:49748-49767 | Msa1415620:CDS | 45.0% | |
| TTATTCCTCCTCCCATTCAG+TGG | + | tig0024251:49847-49866 | Msa1415620:intron | 45.0% | |
| AATTACCACCACTGAATGGG+AGG | - | tig0024251:49858-49877 | None:intergenic | 45.0% | |
| ! | AGTTTGAAAGCGTGACTTCG+GGG | - | tig0024251:49938-49957 | None:intergenic | 45.0% |
| ! | GAGTTTGAAAGCGTGACTTC+GGG | - | tig0024251:49939-49958 | None:intergenic | 45.0% |
| AATAAGAAGGTTCGGCGACT+GGG | + | tig0024251:49959-49978 | Msa1415620:CDS | 45.0% | |
| TATTGTGTCTCTTGCCAGCT+TGG | - | tig0024251:50221-50240 | None:intergenic | 45.0% | |
| ATAGTCCTCACCTTACAAGC+CGG | + | tig0024251:50393-50412 | Msa1415620:intron | 45.0% | |
| !! | TCACCTTACAAGCCGGTTTT+GGG | + | tig0024251:50400-50419 | Msa1415620:intron | 45.0% |
| CTGTGAGAAAACCTTAGGCA+AGG | + | tig0024251:50642-50661 | Msa1415620:intron | 45.0% | |
| ! | CACCGAGCCTCTAAAAACTA+TGG | + | tig0024251:50697-50716 | Msa1415620:intron | 45.0% |
| !! | GCCCATAGTTTTTAGAGGCT+CGG | - | tig0024251:50702-50721 | None:intergenic | 45.0% |
| GTGATTCTTTCAATGGGGGT+GGG | - | tig0024251:50745-50764 | None:intergenic | 45.0% | |
| TGTGATTCTTTCAATGGGGG+TGG | - | tig0024251:50746-50765 | None:intergenic | 45.0% | |
| GTAGGAAAGGGGAAAACGAA+TGG | - | tig0024251:50790-50809 | None:intergenic | 45.0% | |
| ACATTCCAAACGACACCGTT+AGG | + | tig0024251:50822-50841 | Msa1415620:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | + | tig0024251:50980-50999 | Msa1415620:intron | 45.0% | |
| GGTTTCAATAGCCTAAGGTC+AGG | - | tig0024251:51012-51031 | None:intergenic | 45.0% | |
| CGTGTGGTTTCAATAGCCTA+AGG | - | tig0024251:51017-51036 | None:intergenic | 45.0% | |
| AAAAGGACGTGGTACTGTTC+TGG | + | tig0024251:51517-51536 | Msa1415620:intron | 45.0% | |
| !! | CACCCCGGTTTTGTATAGTT+GGG | + | tig0024251:51893-51912 | Msa1415620:intron | 45.0% |
| TAGCCTATCCTAGAACCGTT+AGG | + | tig0024251:51948-51967 | Msa1415620:intron | 45.0% | |
| ! | TGTGGAAACTTGATAGCAGG+TGG | - | tig0024251:51974-51993 | None:intergenic | 45.0% |
| CACGCTTCAGATGTGAATCT+TGG | + | tig0024251:52001-52020 | Msa1415620:intron | 45.0% | |
| CTCTTAACACACACACACTC+AGG | - | tig0024251:52028-52047 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCAGAT+TGG | + | tig0024251:52036-52055 | Msa1415620:intron | 45.0% | |
| CGAGTGAGTCTCCCAAAATA+TGG | + | tig0024251:52207-52226 | Msa1415620:intron | 45.0% | |
| GATGCAGGCTGTTCTTCTAA+AGG | + | tig0024251:52451-52470 | Msa1415620:intron | 45.0% | |
| ! | TCACAGAATTGCTGTTCGGT+AGG | + | tig0024251:52513-52532 | Msa1415620:intron | 45.0% |
| ! | CACAGAATTGCTGTTCGGTA+GGG | + | tig0024251:52514-52533 | Msa1415620:intron | 45.0% |
| TCGGTAGGGAGAATTGAAGT+AGG | + | tig0024251:52528-52547 | Msa1415620:intron | 45.0% | |
| TCTGGATGTGCATTTAGTGG+GGG | - | tig0024251:52651-52670 | None:intergenic | 45.0% | |
| CTCTGGATGTGCATTTAGTG+GGG | - | tig0024251:52652-52671 | None:intergenic | 45.0% | |
| ! | GCTCTGGATGTGCATTTAGT+GGG | - | tig0024251:52653-52672 | None:intergenic | 45.0% |
| !! | AGCTCTGGATGTGCATTTAG+TGG | - | tig0024251:52654-52673 | None:intergenic | 45.0% |
| ACATCCAGAGCTCCAAAGTA+TGG | + | tig0024251:52662-52681 | Msa1415620:intron | 45.0% | |
| !! | TTGACCATACTTTGGAGCTC+TGG | - | tig0024251:52669-52688 | None:intergenic | 45.0% |
| AACTCAAAGAAAGCCGGCAA+AGG | - | tig0024251:52820-52839 | None:intergenic | 45.0% | |
| ! | TTTAGGGTATGTTGCGATGG+AGG | + | tig0024251:53312-53331 | Msa1415620:intron | 45.0% |
| TTAGGGTATGTTGCGATGGA+GGG | + | tig0024251:53313-53332 | Msa1415620:intron | 45.0% | |
| ! | TATGTTGCGATGGAGGGTTT+TGG | + | tig0024251:53319-53338 | Msa1415620:intron | 45.0% |
| ! | AGAACAATGGAGGCTCTAGT+GGG | - | tig0024251:53540-53559 | None:intergenic | 45.0% |
| ! | AAGAACAATGGAGGCTCTAG+TGG | - | tig0024251:53541-53560 | None:intergenic | 45.0% |
| AGTTGAAGTGACACCCTTTG+AGG | - | tig0024251:53606-53625 | None:intergenic | 45.0% | |
| !! | GTGTCACTTCAACTTTCTCC+CGG | + | tig0024251:53612-53631 | Msa1415620:intron | 45.0% |
| !! | ATTTAAATAAATAAAACAAA+CGG | - | tig0024251:47924-47943 | None:intergenic | 5.0% |
| !! | TAATTAATAAATTTAATGAA+TGG | + | tig0024251:49873-49892 | Msa1415620:intron | 5.0% |
| !! | TAATTGTAAATATTAAAAAA+AGG | + | tig0024251:51500-51519 | Msa1415620:intron | 5.0% |
| !! | ATATAATAATAATATATCAA+TGG | + | tig0024251:51804-51823 | Msa1415620:intron | 5.0% |
| CTCTTCTCTTGCCGCTAGTT+AGG | + | tig0024251:47526-47545 | Msa1415620:five_prime_UTR | 50.0% | |
| TTTGATTCACCCAGTGCTGC+TGG | + | tig0024251:47797-47816 | Msa1415620:CDS | 50.0% | |
| ! | TTGATTCACCCAGTGCTGCT+GGG | + | tig0024251:47798-47817 | Msa1415620:CDS | 50.0% |
| CCATATAACCCAGCAGCACT+GGG | - | tig0024251:47809-47828 | None:intergenic | 50.0% | |
| ! | CCAGTGCTGCTGGGTTATAT+GGG | + | tig0024251:47807-47826 | Msa1415620:CDS | 50.0% |
| ! | CAGTGCTGCTGGGTTATATG+GGG | + | tig0024251:47808-47827 | Msa1415620:CDS | 50.0% |
| CTGCCTACCACCATCTATCA+TGG | + | tig0024251:48578-48597 | Msa1415620:intron | 50.0% | |
| CACGCTGCCACAAAACAACA+CGG | - | tig0024251:48804-48823 | None:intergenic | 50.0% | |
| TGCTCTGGCAATTGTCTGTG+AGG | + | tig0024251:49005-49024 | Msa1415620:intron | 50.0% | |
| CTGGCAATTGTCTGTGAGGA+TGG | + | tig0024251:49009-49028 | Msa1415620:intron | 50.0% | |
| TGTGAGGATGGAGTGGAGTA+GGG | + | tig0024251:49021-49040 | Msa1415620:intron | 50.0% | |
| ACAGCAAGGGAAGAAGAGTG+AGG | - | tig0024251:49414-49433 | None:intergenic | 50.0% | |
| ATTAGTGAGGTCAGTGGGAC+TGG | + | tig0024251:49725-49744 | Msa1415620:CDS | 50.0% | |
| TTAGTGAGGTCAGTGGGACT+GGG | + | tig0024251:49726-49745 | Msa1415620:CDS | 50.0% | |
| !!! | CCAGTTCCCTTTTGGTTCCA+AGG | - | tig0024251:49758-49777 | None:intergenic | 50.0% |
| CCTTGGAACCAAAAGGGAAC+TGG | + | tig0024251:49755-49774 | Msa1415620:CDS | 50.0% | |
| ! | TTGCTCGACCAGTTCCCTTT+TGG | - | tig0024251:49766-49785 | None:intergenic | 50.0% |
| AAAAGGGAACTGGTCGAGCA+AGG | + | tig0024251:49765-49784 | Msa1415620:CDS | 50.0% | |
| GGAGGAGGAATAAAATGGGC+TGG | - | tig0024251:49840-49859 | None:intergenic | 50.0% | |
| CAATAAGAAGGTTCGGCGAC+TGG | + | tig0024251:49958-49977 | Msa1415620:CDS | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | tig0024251:50401-50420 | None:intergenic | 50.0% |
| !! | CTCACCTTACAAGCCGGTTT+TGG | + | tig0024251:50399-50418 | Msa1415620:intron | 50.0% |
| GAGAAAACCTTAGGCAAGGC+CGG | + | tig0024251:50646-50665 | Msa1415620:intron | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | + | tig0024251:50795-50814 | Msa1415620:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | - | tig0024251:50801-50820 | None:intergenic | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | - | tig0024251:50802-50821 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | - | tig0024251:50803-50822 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | - | tig0024251:50808-50827 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | tig0024251:50990-51009 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | tig0024251:50993-51012 | None:intergenic | 50.0% | |
| CCAACTATACAAAACCGGGG+TGG | - | tig0024251:51895-51914 | None:intergenic | 50.0% | |
| !! | CCACCCCGGTTTTGTATAGT+TGG | + | tig0024251:51892-51911 | Msa1415620:intron | 50.0% |
| !! | TGGCCTAACGGTTCTAGGAT+AGG | - | tig0024251:51954-51973 | None:intergenic | 50.0% |
| ! | CTTGATAGCAGGTGGCCTAA+CGG | - | tig0024251:51966-51985 | None:intergenic | 50.0% |
| ! | TCTGAAGCGTGACCTGATTG+TGG | - | tig0024251:51992-52011 | None:intergenic | 50.0% |
| AAAGGACAGCTGATGCAGTG+CGG | - | tig0024251:52802-52821 | None:intergenic | 50.0% | |
| !!! | TTGCGATGGAGGGTTTTGGA+GGG | + | tig0024251:53323-53342 | Msa1415620:intron | 50.0% |
| ! | CACCCTTTGAGGAGAAGATG+AGG | - | tig0024251:53595-53614 | None:intergenic | 50.0% |
| TTGAACAGTGAAGCGGCGAT+AGG | - | tig0024251:53707-53726 | None:intergenic | 50.0% | |
| CAAGAGCTCCGAGAACCAAC+AGG | - | tig0024251:47473-47492 | None:intergenic | 55.0% | |
| ! | CCCAGTGCTGCTGGGTTATA+TGG | + | tig0024251:47806-47825 | Msa1415620:CDS | 55.0% |
| CCCATATAACCCAGCAGCAC+TGG | - | tig0024251:47810-47829 | None:intergenic | 55.0% | |
| TCACGCTCAGATGTTGCGAG+AGG | - | tig0024251:48026-48045 | None:intergenic | 55.0% | |
| TTATGCTGCAGGGCTCTGTC+AGG | + | tig0024251:48678-48697 | Msa1415620:intron | 55.0% | |
| CTGTGAGGATGGAGTGGAGT+AGG | + | tig0024251:49020-49039 | Msa1415620:intron | 55.0% | |
| GTGAGGATGGAGTGGAGTAG+GGG | + | tig0024251:49022-49041 | Msa1415620:intron | 55.0% | |
| TGAGGATGGAGTGGAGTAGG+GGG | + | tig0024251:49023-49042 | Msa1415620:intron | 55.0% | |
| ATGGAGTGGAGTAGGGGGTT+GGG | + | tig0024251:49028-49047 | Msa1415620:intron | 55.0% | |
| !! | GTGTAGAGAGGCATCGGGTA+GGG | - | tig0024251:49323-49342 | None:intergenic | 55.0% |
| !! | TGTGTAGAGAGGCATCGGGT+AGG | - | tig0024251:49324-49343 | None:intergenic | 55.0% |
| GAACTGGTCGAGCAAGGCAT+GGG | + | tig0024251:49771-49790 | Msa1415620:CDS | 55.0% | |
| CAAGGCATGGGTCATTGCGT+GGG | + | tig0024251:49783-49802 | Msa1415620:CDS | 55.0% | |
| TTCCTCCTCCCATTCAGTGG+TGG | + | tig0024251:49850-49869 | Msa1415620:intron | 55.0% | |
| TACCACCACTGAATGGGAGG+AGG | - | tig0024251:49855-49874 | None:intergenic | 55.0% | |
| GAATGGCAACAGTTCAGGGG+TGG | + | tig0024251:49890-49909 | Msa1415620:intron | 55.0% | |
| AAAGCGTGACTTCGGGGCTT+AGG | - | tig0024251:49932-49951 | None:intergenic | 55.0% | |
| AGCTCGTGCAGCAGAAGGAA+AGG | + | tig0024251:50000-50019 | Msa1415620:CDS | 55.0% | |
| !! | CCACCCAAAACCGGCTTGTA+AGG | - | tig0024251:50406-50425 | None:intergenic | 55.0% |
| !!! | CCTTACAAGCCGGTTTTGGG+TGG | + | tig0024251:50403-50422 | Msa1415620:intron | 55.0% |
| TTCTTGCACTCCCCAAGGTC+CGG | - | tig0024251:50668-50687 | None:intergenic | 55.0% | |
| ATAGGAACGGCCCTGACCTT+AGG | + | tig0024251:50998-51017 | Msa1415620:intron | 55.0% | |
| ! | CATTGAAGAGTGGAGGCGTG+TGG | - | tig0024251:51033-51052 | None:intergenic | 55.0% |
| CACACGCCTCCACTCTTCAA+TGG | + | tig0024251:51031-51050 | Msa1415620:intron | 55.0% | |
| AGGACGTGGTACTGTTCTGG+TGG | + | tig0024251:51520-51539 | Msa1415620:intron | 55.0% | |
| GTGCATGGTAAATGCCACCC+CGG | + | tig0024251:51878-51897 | Msa1415620:intron | 55.0% | |
| AAGGACAGCTGATGCAGTGC+GGG | - | tig0024251:52801-52820 | None:intergenic | 55.0% | |
| CTGCATCAGCTGTCCTTTGC+CGG | + | tig0024251:52804-52823 | Msa1415620:intron | 55.0% | |
| !! | GTTGCGATGGAGGGTTTTGG+AGG | + | tig0024251:53322-53341 | Msa1415620:intron | 55.0% |
| !!! | TGCGATGGAGGGTTTTGGAG+GGG | + | tig0024251:53324-53343 | Msa1415620:intron | 55.0% |
| !!! | ATGGAGGGTTTTGGAGGGGA+GGG | + | tig0024251:53328-53347 | Msa1415620:intron | 55.0% |
| ! | GGAGGCTCTAGTGGGAAAAG+TGG | - | tig0024251:53532-53551 | None:intergenic | 55.0% |
| ATCAAAGCAGCGCCGTGCCA+AGG | - | tig0024251:47783-47802 | None:intergenic | 60.0% | |
| GCAGCGTGCAAAACGCCAAC+AGG | + | tig0024251:48816-48835 | Msa1415620:CDS | 60.0% | |
| GATGGAGTGGAGTAGGGGGT+TGG | + | tig0024251:49027-49046 | Msa1415620:intron | 60.0% | |
| !! | AGAGAGGCATCGGGTAGGGT+TGG | - | tig0024251:49319-49338 | None:intergenic | 60.0% |
| CAGAGGGCGGAAAAGACGCA+AGG | - | tig0024251:49357-49376 | None:intergenic | 60.0% | |
| GTGGGACTGGGAGAAAGCCT+TGG | + | tig0024251:49738-49757 | Msa1415620:CDS | 60.0% | |
| GGAACTGGTCGAGCAAGGCA+TGG | + | tig0024251:49770-49789 | Msa1415620:CDS | 60.0% | |
| GCAAGGCATGGGTCATTGCG+TGG | + | tig0024251:49782-49801 | Msa1415620:CDS | 60.0% | |
| AGGGGTGGTGAAGCGAAGCA+TGG | + | tig0024251:49905-49924 | Msa1415620:CDS | 60.0% | |
| CTGTCAGCTCGTGCAGCAGA+AGG | + | tig0024251:49995-50014 | Msa1415620:CDS | 60.0% | |
| GTGTCTCTTGCCAGCTTGGC+TGG | - | tig0024251:50217-50236 | None:intergenic | 60.0% | |
| CTTAGGCAAGGCCGGACCTT+GGG | + | tig0024251:50654-50673 | Msa1415620:intron | 60.0% | |
| TTAGGCAAGGCCGGACCTTG+GGG | + | tig0024251:50655-50674 | Msa1415620:intron | 60.0% | |
| AGCGCTTCTTGCACTCCCCA+AGG | - | tig0024251:50673-50692 | None:intergenic | 60.0% | |
| GCAGGTGGCCTAACGGTTCT+AGG | - | tig0024251:51959-51978 | None:intergenic | 60.0% | |
| !!! | GATGGAGGGTTTTGGAGGGG+AGG | + | tig0024251:53327-53346 | Msa1415620:intron | 60.0% |
| GGGCGGAAAAGACGCAAGGC+AGG | - | tig0024251:49353-49372 | None:intergenic | 65.0% | |
| TGGGTCATTGCGTGGGCCTC+AGG | + | tig0024251:49790-49809 | Msa1415620:CDS | 65.0% | |
| CCAAGGTCCGGCCTTGCCTA+AGG | - | tig0024251:50656-50675 | None:intergenic | 65.0% | |
| CCTTAGGCAAGGCCGGACCT+TGG | + | tig0024251:50653-50672 | Msa1415620:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024251 | gene | 47426 | 54311 | 47426 | ID=Msa1415620;Name=Msa1415620 |
| tig0024251 | mRNA | 47426 | 54311 | 47426 | ID=Msa1415620-mRNA-1;Parent=Msa1415620;Name=Msa1415620-mRNA-1;_AED=0.08;_eAED=0.08;_QI=137|1|1|1|0.85|0.75|8|235|297 |
| tig0024251 | exon | 47426 | 47547 | 47426 | ID=Msa1415620-mRNA-1:exon:22495;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 47722 | 47859 | 47722 | ID=Msa1415620-mRNA-1:exon:22496;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 47948 | 48050 | 47948 | ID=Msa1415620-mRNA-1:exon:22497;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 48689 | 48837 | 48689 | ID=Msa1415620-mRNA-1:exon:22498;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 49704 | 49811 | 49704 | ID=Msa1415620-mRNA-1:exon:22499;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 49902 | 50021 | 49902 | ID=Msa1415620-mRNA-1:exon:22500;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 53059 | 53232 | 53059 | ID=Msa1415620-mRNA-1:exon:22501;Parent=Msa1415620-mRNA-1 |
| tig0024251 | exon | 53960 | 54311 | 53960 | ID=Msa1415620-mRNA-1:exon:22502;Parent=Msa1415620-mRNA-1 |
| tig0024251 | five_prime_UTR | 47426 | 47547 | 47426 | ID=Msa1415620-mRNA-1:five_prime_utr;Parent=Msa1415620-mRNA-1 |
| tig0024251 | five_prime_UTR | 47722 | 47736 | 47722 | ID=Msa1415620-mRNA-1:five_prime_utr;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 47737 | 47859 | 47737 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 47948 | 48050 | 47948 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 48689 | 48837 | 48689 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 49704 | 49811 | 49704 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 49902 | 50021 | 49902 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 53059 | 53232 | 53059 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | CDS | 53960 | 54076 | 53960 | ID=Msa1415620-mRNA-1:cds;Parent=Msa1415620-mRNA-1 |
| tig0024251 | three_prime_UTR | 54077 | 54311 | 54077 | ID=Msa1415620-mRNA-1:three_prime_utr;Parent=Msa1415620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
