Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479980 | AES73712.2 | 97.333 | 300 | 5 | 1 | 1 | 297 | 48 | 347 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479980 | sp|B6IRQ7|RL4_RHOCS | 50.990 | 202 | 98 | 1 | 85 | 286 | 5 | 205 | 2.54e-62 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479980 | G7JBP6 | 97.333 | 300 | 5 | 1 | 1 | 297 | 48 | 347 | 0.0 | 598 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0040220 | Msa0479980 | 0.835040 | 2.114625e-56 | -8.615850e-47 |
| Msa0047650 | Msa0479980 | 0.809386 | 1.941193e-50 | -8.615850e-47 |
| Msa0087910 | Msa0479980 | 0.831291 | 1.814518e-55 | -8.615850e-47 |
| Msa0114600 | Msa0479980 | 0.826166 | 3.149033e-54 | -8.615850e-47 |
| Msa0128330 | Msa0479980 | 0.801183 | 1.015219e-48 | -8.615850e-47 |
| Msa0132460 | Msa0479980 | 0.818357 | 2.044372e-52 | -8.615850e-47 |
| Msa0134580 | Msa0479980 | 0.843557 | 1.302643e-58 | -8.615850e-47 |
| Msa0167860 | Msa0479980 | 0.811828 | 5.758161e-51 | -8.615850e-47 |
| Msa0182050 | Msa0479980 | 0.819685 | 1.020147e-52 | -8.615850e-47 |
| Msa0182100 | Msa0479980 | 0.813808 | 2.121815e-51 | -8.615850e-47 |
| Msa0188740 | Msa0479980 | 0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa0192300 | Msa0479980 | 0.805706 | 1.172713e-49 | -8.615850e-47 |
| Msa0192490 | Msa0479980 | 0.823356 | 1.447493e-53 | -8.615850e-47 |
| Msa0194940 | Msa0479980 | 0.826553 | 2.547353e-54 | -8.615850e-47 |
| Msa0223240 | Msa0479980 | 0.814410 | 1.562578e-51 | -8.615850e-47 |
| Msa0234850 | Msa0479980 | 0.809225 | 2.102042e-50 | -8.615850e-47 |
| Msa0382950 | Msa0479980 | 0.915885 | 3.457523e-85 | -8.615850e-47 |
| Msa0382960 | Msa0479980 | 0.889668 | 1.971347e-73 | -8.615850e-47 |
| Msa0426090 | Msa0479980 | 0.804057 | 2.592492e-49 | -8.615850e-47 |
| Msa0426250 | Msa0479980 | 0.827340 | 1.651605e-54 | -8.615850e-47 |
| Msa0432750 | Msa0479980 | 0.997861 | 9.189757e-251 | -8.615850e-47 |
| Msa0475810 | Msa0479980 | 0.807840 | 4.153354e-50 | -8.615850e-47 |
| Msa0479980 | Msa0529900 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
| Msa0479980 | Msa0547920 | 0.856547 | 2.989353e-62 | -8.615850e-47 |
| Msa0479980 | Msa0554210 | 0.842869 | 1.986534e-58 | -8.615850e-47 |
| Msa0479980 | Msa0573550 | 0.812035 | 5.191475e-51 | -8.615850e-47 |
| Msa0479980 | Msa0602900 | 0.843724 | 1.174982e-58 | -8.615850e-47 |
| Msa0479980 | Msa0605890 | 0.809821 | 1.565743e-50 | -8.615850e-47 |
| Msa0479980 | Msa0643960 | 0.849060 | 4.118992e-60 | -8.615850e-47 |
| Msa0479980 | Msa0648620 | 0.839749 | 1.315177e-57 | -8.615850e-47 |
| Msa0479980 | Msa0648670 | 0.847631 | 1.023483e-59 | -8.615850e-47 |
| Msa0479980 | Msa0694400 | 0.814212 | 1.727966e-51 | -8.615850e-47 |
| Msa0479980 | Msa0708630 | 0.818558 | 1.841518e-52 | -8.615850e-47 |
| Msa0479980 | Msa0748350 | 0.819142 | 1.356480e-52 | -8.615850e-47 |
| Msa0479980 | Msa0790450 | 0.839671 | 1.378171e-57 | -8.615850e-47 |
| Msa0479980 | Msa0929700 | 0.830535 | 2.780528e-55 | -8.615850e-47 |
| Msa0479980 | Msa0930890 | 0.813767 | 2.167017e-51 | -8.615850e-47 |
| Msa0479980 | Msa1004780 | 0.801404 | 9.150420e-49 | -8.615850e-47 |
| Msa0479980 | Msa1025200 | 0.835678 | 1.459397e-56 | -8.615850e-47 |
| Msa0479980 | Msa1025220 | 0.822306 | 2.541440e-53 | -8.615850e-47 |
| Msa0479980 | Msa1047020 | 0.824340 | 8.512586e-54 | -8.615850e-47 |
| Msa0479980 | Msa1050100 | 0.820110 | 8.154494e-53 | -8.615850e-47 |
| Msa0479980 | Msa1085850 | 0.809367 | 1.959395e-50 | -8.615850e-47 |
| Msa0479980 | Msa1116940 | 0.875261 | 3.541786e-68 | -8.615850e-47 |
| Msa0479980 | Msa1136880 | 0.870548 | 1.342846e-66 | -8.615850e-47 |
| Msa0479980 | Msa1219760 | 0.839591 | 1.446327e-57 | -8.615850e-47 |
| Msa0479980 | Msa1235950 | 0.831927 | 1.264825e-55 | -8.615850e-47 |
| Msa0479980 | Msa1235980 | 0.835798 | 1.360212e-56 | -8.615850e-47 |
| Msa0479980 | Msa1237040 | 0.834227 | 3.386264e-56 | -8.615850e-47 |
| Msa0479980 | Msa1258540 | 0.821293 | 4.360601e-53 | -8.615850e-47 |
| Msa0479980 | Msa1284060 | 0.820962 | 5.198393e-53 | -8.615850e-47 |
| Msa0479980 | Msa1317390 | 0.806293 | 8.825579e-50 | -8.615850e-47 |
| Msa0479980 | Msa1332230 | 0.812731 | 3.657343e-51 | -8.615850e-47 |
| Msa0479980 | Msa1333370 | 0.840709 | 7.385185e-58 | -8.615850e-47 |
| Msa0479980 | Msa1341780 | 0.891347 | 4.317533e-74 | -8.615850e-47 |
| Msa0479980 | Msa1353300 | 0.806673 | 7.336929e-50 | -8.615850e-47 |
| Msa0479980 | Msa1367540 | 0.810536 | 1.097765e-50 | -8.615850e-47 |
| Msa0479980 | Msa1371410 | 0.994068 | 2.523554e-204 | -8.615850e-47 |
| Msa0479980 | Msa1385480 | 0.818909 | 1.532513e-52 | -8.615850e-47 |
| Msa0479980 | Msa1415620 | 0.996422 | 2.523934e-227 | -8.615850e-47 |
| Msa0479980 | Msa1424570 | 0.804400 | 2.199876e-49 | -8.615850e-47 |
| Msa0479980 | Msa1433590 | 0.800249 | 1.574831e-48 | -8.615850e-47 |
| Msa0479980 | Msa1450560 | 0.841064 | 5.959224e-58 | -8.615850e-47 |
| Msa0479980 | Msa1463570 | 0.800481 | 1.412685e-48 | -8.615850e-47 |
| Msa0479980 | Msa1465700 | 0.830061 | 3.629305e-55 | -8.615850e-47 |
| Msa0270160 | Msa0479980 | 0.808138 | 3.588231e-50 | -8.615850e-47 |
| Msa0277600 | Msa0479980 | 0.847662 | 1.003269e-59 | -8.615850e-47 |
| Msa0301250 | Msa0479980 | 0.809064 | 2.276047e-50 | -8.615850e-47 |
| Msa0313060 | Msa0479980 | 0.825833 | 3.777329e-54 | -8.615850e-47 |
| Msa0315430 | Msa0479980 | 0.839117 | 1.919513e-57 | -8.615850e-47 |
| Msa0340560 | Msa0479980 | 0.822724 | 2.033018e-53 | -8.615850e-47 |
| Msa0363320 | Msa0479980 | 0.807738 | 4.365986e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479980 | MtrunA17_Chr3g0138321 | 97.333 | 300 | 5 | 1 | 1 | 297 | 1 | 300 | 0.0 | 596 |
| Msa0479980 | MtrunA17_Chr8g0335501 | 36.715 | 207 | 125 | 4 | 78 | 280 | 50 | 254 | 2.98e-29 | 112 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0479980 | AT2G20060.1 | 67.320 | 306 | 78 | 4 | 1 | 291 | 1 | 299 | 3.72e-146 | 412 |
| Msa0479980 | AT1G07320.2 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 3.84e-20 | 88.6 |
| Msa0479980 | AT1G07320.1 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 3.96e-20 | 88.6 |
| Msa0479980 | AT1G07320.4 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 4.07e-20 | 88.2 |
| Msa0479980 | AT1G07320.3 | 31.674 | 221 | 135 | 5 | 66 | 279 | 43 | 254 | 4.07e-20 | 88.2 |
Find 92 sgRNAs with CRISPR-Local
Find 479 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTACCTCAACCATTTATT+TGG | 0.072403 | 3_3:-85158470 | None:intergenic |
| CAACGAAGACAAGGGCTTTA+TGG | 0.163918 | 3_3:+85153130 | Msa0479980:CDS |
| CCCAGTGCTGCTGGGTTATA+TGG | 0.172532 | 3_3:+85152207 | Msa0479980:CDS |
| TTATTTGGGTGTGGATTTAT+TGG | 0.194249 | 3_3:-85158455 | None:intergenic |
| TGTTTCGGAGAGATGGGTTT+TGG | 0.215248 | 3_3:-85151846 | None:intergenic |
| GCTTCTAGTGTTTGAGGATT+TGG | 0.223422 | 3_3:+85157459 | Msa0479980:intron |
| CAAGATTAAAACTTAGGATT+TGG | 0.270503 | 3_3:+85158644 | Msa0479980:three_prime_UTR |
| CTCAAATGGTTAAGTTGTTA+TGG | 0.283472 | 3_3:+85158684 | Msa0479980:three_prime_UTR |
| TAAATCCACACCCAAATAAA+TGG | 0.297256 | 3_3:+85158459 | Msa0479980:exon |
| AATTCTGTTCACAGCATCTT+TGG | 0.299153 | 3_3:-85158407 | None:intergenic |
| TTTGATTCACCCAGTGCTGC+TGG | 0.304551 | 3_3:+85152198 | Msa0479980:CDS |
| TTGCTCGACCAGTTCCCTTT+TGG | 0.310177 | 3_3:-85154164 | None:intergenic |
| ATCTACGATCAGAAGTTTCT+TGG | 0.323553 | 3_3:-85157539 | None:intergenic |
| ATAAGAAAGAAGTAGCCTTT+TGG | 0.327708 | 3_3:-85152154 | None:intergenic |
| CTCTTCTCTTGCCGCTAGTT+AGG | 0.347311 | 3_3:+85151927 | Msa0479980:five_prime_UTR |
| TCGTTGTGAAAGTTGGTAAC+TGG | 0.350576 | 3_3:-85153113 | None:intergenic |
| GTAGGTTGATTCTTCAGTTA+TGG | 0.350673 | 3_3:+85152119 | Msa0479980:intron |
| CCAGTGCTGCTGGGTTATAT+GGG | 0.354877 | 3_3:+85152208 | Msa0479980:CDS |
| ATTAGTGAGGTCAGTGGGAC+TGG | 0.362388 | 3_3:+85154126 | Msa0479980:CDS |
| TATACAGCTTCTAGTGTTTG+AGG | 0.367365 | 3_3:+85157453 | Msa0479980:intron |
| AACTTCATTTACTCAGGATT+AGG | 0.367891 | 3_3:+85158508 | Msa0479980:three_prime_UTR |
| CCCATATAACCCAGCAGCAC+TGG | 0.368405 | 3_3:-85152208 | None:intergenic |
| ACTTCTTTCTTATCAATCCT+TGG | 0.378210 | 3_3:+85152164 | Msa0479980:CDS |
| GGTGTGGATTTATTGGAGAT+TGG | 0.392265 | 3_3:-85158448 | None:intergenic |
| ACTACCTCAACCATTTATTT+GGG | 0.392940 | 3_3:-85158469 | None:intergenic |
| GAGTTTGAAAGCGTGACTTC+GGG | 0.393295 | 3_3:-85154337 | None:intergenic |
| GAGAACCAACAGGTTTGTTT+CGG | 0.394983 | 3_3:-85151861 | None:intergenic |
| GCAACATCTGAGCGTGATAT+AGG | 0.405707 | 3_3:+85152430 | Msa0479980:CDS |
| AAAGCGTGACTTCGGGGCTT+AGG | 0.410919 | 3_3:-85154330 | None:intergenic |
| CTCAAGCAAAATATTCTCAT+TGG | 0.412421 | 3_3:-85158570 | None:intergenic |
| TGGGTCATTGCGTGGGCCTC+AGG | 0.414756 | 3_3:+85154191 | Msa0479980:CDS |
| TTGTTTCAAGATTAAAACTT+AGG | 0.418739 | 3_3:+85158638 | Msa0479980:three_prime_UTR |
| CATTTCTGCTCACCGTATCT+TGG | 0.423638 | 3_3:+85152239 | Msa0479980:CDS |
| GGTTTCTGATAAAATTATAC+AGG | 0.430088 | 3_3:+85158592 | Msa0479980:three_prime_UTR |
| CAATAAGAAGGTTCGGCGAC+TGG | 0.432512 | 3_3:+85154359 | Msa0479980:CDS |
| CAGGTTTGTTTCGGAGAGAT+GGG | 0.433251 | 3_3:-85151852 | None:intergenic |
| CTCAACCATTTATTTGGGTG+TGG | 0.441163 | 3_3:-85158464 | None:intergenic |
| TTATGCTGCAGGGCTCTGTC+AGG | 0.442320 | 3_3:+85153079 | Msa0479980:intron |
| GAGAAAGCCTTGGAACCAAA+AGG | 0.454529 | 3_3:+85154149 | Msa0479980:CDS |
| TCTAGTGTTTGAGGATTTGG+AGG | 0.457747 | 3_3:+85157462 | Msa0479980:CDS |
| GAAACAAACCTGTTGGTTCT+CGG | 0.461567 | 3_3:+85151863 | Msa0479980:five_prime_UTR |
| TGAGTTTGAAAGCGTGACTT+CGG | 0.462197 | 3_3:-85154338 | None:intergenic |
| ACAGGTTTGTTTCGGAGAGA+TGG | 0.462323 | 3_3:-85151853 | None:intergenic |
| GCAGCGTGCAAAACGCCAAC+AGG | 0.466799 | 3_3:+85153217 | Msa0479980:CDS |
| CTTGTCTTCGTTGTGAAAGT+TGG | 0.471718 | 3_3:-85153120 | None:intergenic |
| TCAAACTCAATAAGAAGGTT+CGG | 0.474336 | 3_3:+85154352 | Msa0479980:CDS |
| CGCTTTCAAACTCAATAAGA+AGG | 0.480982 | 3_3:+85154347 | Msa0479980:CDS |
| CAGTAGAAGTAGAAAAGCGT+TGG | 0.484013 | 3_3:-85152363 | None:intergenic |
| TGAACTATATCCTTCCGAAT+AGG | 0.487787 | 3_3:-85153179 | None:intergenic |
| CCTTGGAACCAAAAGGGAAC+TGG | 0.491414 | 3_3:+85154156 | Msa0479980:CDS |
| TGGCTTCTTTCATCTCCAAA+AGG | 0.496230 | 3_3:+85152139 | Msa0479980:CDS |
| GCAAGGCATGGGTCATTGCG+TGG | 0.496788 | 3_3:+85154183 | Msa0479980:CDS |
| TTGATTCACCCAGTGCTGCT+GGG | 0.499368 | 3_3:+85152199 | Msa0479980:CDS |
| CAAGAGCTCCGAGAACCAAC+AGG | 0.505865 | 3_3:-85151871 | None:intergenic |
| GTACTAAACTTCATTTACTC+AGG | 0.508949 | 3_3:+85158502 | Msa0479980:three_prime_UTR |
| AAACTGATACTTACAATGGA+TGG | 0.519437 | 3_3:-85157625 | None:intergenic |
| CTGTCAGCTCGTGCAGCAGA+AGG | 0.521868 | 3_3:+85154396 | Msa0479980:CDS |
| CCATATAACCCAGCAGCACT+GGG | 0.532120 | 3_3:-85152207 | None:intergenic |
| ATTAAAACTTAGGATTTGGA+TGG | 0.533638 | 3_3:+85158648 | Msa0479980:three_prime_UTR |
| AATAAGAAGGTTCGGCGACT+GGG | 0.536871 | 3_3:+85154360 | Msa0479980:CDS |
| AAAGCGTTGGGTGATTGATC+CGG | 0.543562 | 3_3:-85152350 | None:intergenic |
| TTAGTGAGGTCAGTGGGACT+GGG | 0.544271 | 3_3:+85154127 | Msa0479980:CDS |
| GTGGGACTGGGAGAAAGCCT+TGG | 0.549232 | 3_3:+85154139 | Msa0479980:CDS |
| CAACTTTCACAACGAAGACA+AGG | 0.552359 | 3_3:+85153121 | Msa0479980:CDS |
| AGAAAGCCTTGGAACCAAAA+GGG | 0.558506 | 3_3:+85154150 | Msa0479980:CDS |
| GGAACTGGTCGAGCAAGGCA+TGG | 0.559028 | 3_3:+85154171 | Msa0479980:CDS |
| TTTCTTATCAATCCTTGGCA+CGG | 0.559499 | 3_3:+85152169 | Msa0479980:CDS |
| GAATGCAATGTACCAAGATA+CGG | 0.566350 | 3_3:-85152251 | None:intergenic |
| AGCTCGTGCAGCAGAAGGAA+AGG | 0.568393 | 3_3:+85154401 | Msa0479980:CDS |
| CAAGGCATGGGTCATTGCGT+GGG | 0.570939 | 3_3:+85154184 | Msa0479980:CDS |
| AGTAGAAGTAGAAAAGCGTT+GGG | 0.572426 | 3_3:-85152362 | None:intergenic |
| ATCAAAGCAGCGCCGTGCCA+AGG | 0.573221 | 3_3:-85152181 | None:intergenic |
| AAACTATTAGTGAGGTCAGT+GGG | 0.576745 | 3_3:+85154121 | Msa0479980:CDS |
| CACACCCAAATAAATGGTTG+AGG | 0.579840 | 3_3:+85158465 | Msa0479980:exon |
| CAGTGCTGCTGGGTTATATG+GGG | 0.586267 | 3_3:+85152209 | Msa0479980:CDS |
| GAACTGGTCGAGCAAGGCAT+GGG | 0.586611 | 3_3:+85154172 | Msa0479980:CDS |
| AAAAGGGAACTGGTCGAGCA+AGG | 0.599214 | 3_3:+85154166 | Msa0479980:CDS |
| ATCACTGTGTTACAGAAATG+AGG | 0.601606 | 3_3:-85158547 | None:intergenic |
| TCTCTCCGAAACAAACCTGT+TGG | 0.602751 | 3_3:+85151856 | Msa0479980:five_prime_UTR |
| AAGAGAAGAGAACATAAATG+AGG | 0.610352 | 3_3:-85151914 | None:intergenic |
| GTGTTACAGAAATGAGGACA+TGG | 0.610594 | 3_3:-85158541 | None:intergenic |
| AACTTTCACAACGAAGACAA+GGG | 0.614854 | 3_3:+85153122 | Msa0479980:CDS |
| AATGAATGGCAACAGTTCAG+GGG | 0.626239 | 3_3:+85154288 | Msa0479980:intron |
| AGGGGTGGTGAAGCGAAGCA+TGG | 0.631679 | 3_3:+85154306 | Msa0479980:CDS |
| TGTTACAGAAATGAGGACAT+GGG | 0.643485 | 3_3:-85158540 | None:intergenic |
| CACGCTGCCACAAAACAACA+CGG | 0.652436 | 3_3:-85153202 | None:intergenic |
| AAACTTCTGATCGTAGATGA+CGG | 0.659438 | 3_3:+85157544 | Msa0479980:CDS |
| GAATGGCAACAGTTCAGGGG+TGG | 0.663853 | 3_3:+85154291 | Msa0479980:intron |
| GTTACAGAAATGAGGACATG+GGG | 0.672070 | 3_3:-85158539 | None:intergenic |
| AAAACTATTAGTGAGGTCAG+TGG | 0.674538 | 3_3:+85154120 | Msa0479980:CDS |
| AGTTTGAAAGCGTGACTTCG+GGG | 0.691763 | 3_3:-85154336 | None:intergenic |
| TCACGCTCAGATGTTGCGAG+AGG | 0.692190 | 3_3:-85152424 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTAATTTTTAAGAAAGA+AGG | - | chr3_3:85154461-85154480 | None:intergenic | 10.0% |
| !!! | TTTATAAATTTTCATTTAAC+AGG | - | chr3_3:85155504-85155523 | None:intergenic | 10.0% |
| !! | GTAATTTAAAAAATTATAGT+GGG | - | chr3_3:85155789-85155808 | None:intergenic | 10.0% |
| !!! | CACTATAATTTTTTAAATTA+CGG | + | chr3_3:85155788-85155807 | Msa0479980:intron | 10.0% |
| !! | AATTTCAAATAGAAAATTTA+TGG | - | chr3_3:85155838-85155857 | None:intergenic | 10.0% |
| !!! | TTTTATTATAGACAATTTAA+AGG | + | chr3_3:85156104-85156123 | Msa0479980:intron | 10.0% |
| !!! | TTATTATTTTTCCATATTTT+GGG | - | chr3_3:85156622-85156641 | None:intergenic | 10.0% |
| !!! | ATTATTATTTTTCCATATTT+TGG | - | chr3_3:85156623-85156642 | None:intergenic | 10.0% |
| !! | TTATTTATTTAAATGTAGAC+CGG | + | chr3_3:85152331-85152350 | Msa0479980:intron | 15.0% |
| !! | ACTTAGATATAAATATCTTA+TGG | + | chr3_3:85152658-85152677 | Msa0479980:intron | 15.0% |
| !! | ACAGTTATATTGATATATAT+TGG | + | chr3_3:85152754-85152773 | Msa0479980:intron | 15.0% |
| !! | AAAACTTAGATTTGTATTTA+TGG | - | chr3_3:85152919-85152938 | None:intergenic | 15.0% |
| !! | ATCTAAGTATATTATTAATG+TGG | + | chr3_3:85153052-85153071 | Msa0479980:intron | 15.0% |
| !! | TATGAATATGTGATTATAAA+CGG | + | chr3_3:85154769-85154788 | Msa0479980:intron | 15.0% |
| !!! | GGTATTATAATTTTTTTTTG+AGG | - | chr3_3:85155125-85155144 | None:intergenic | 15.0% |
| !! | TTACAAAAATAAACCAATAT+GGG | - | chr3_3:85155527-85155546 | None:intergenic | 15.0% |
| !! | ATTACAAAAATAAACCAATA+TGG | - | chr3_3:85155528-85155547 | None:intergenic | 15.0% |
| !! | CGTAATTTAAAAAATTATAG+TGG | - | chr3_3:85155790-85155809 | None:intergenic | 15.0% |
| !!! | ATTTGAAATTTATCCTAATA+TGG | + | chr3_3:85155848-85155867 | Msa0479980:intron | 15.0% |
| !! | TAAATTAACTATTCCATATT+AGG | - | chr3_3:85155864-85155883 | None:intergenic | 15.0% |
| !! | AATTGTCTATAATAAAAGTT+GGG | - | chr3_3:85156101-85156120 | None:intergenic | 15.0% |
| !! | AAATTGTCTATAATAAAAGT+TGG | - | chr3_3:85156102-85156121 | None:intergenic | 15.0% |
| !! | AATAACAAAAAGTTAGTTAT+AGG | + | chr3_3:85156154-85156173 | Msa0479980:intron | 15.0% |
| !!! | ATTATCTTAGAATTTTGATT+GGG | - | chr3_3:85156325-85156344 | None:intergenic | 15.0% |
| !!! | TATTATCTTAGAATTTTGAT+TGG | - | chr3_3:85156326-85156345 | None:intergenic | 15.0% |
| !! | ATATGGAAAAATAATAATCT+AGG | + | chr3_3:85156625-85156644 | Msa0479980:intron | 15.0% |
| !!! | TATAATTTTACAGCAAAAAA+AGG | - | chr3_3:85156712-85156731 | None:intergenic | 15.0% |
| !! | AACTCATAAAATAAAGAAAA+AGG | + | chr3_3:85157169-85157188 | Msa0479980:intron | 15.0% |
| !! | ATTATATGTTAAATAAGAGT+CGG | + | chr3_3:85157393-85157412 | Msa0479980:intron | 15.0% |
| !!! | TCTATATTTTGAAATACATT+TGG | - | chr3_3:85157867-85157886 | None:intergenic | 15.0% |
| !! | AAATTATGAATGAAAATATC+CGG | - | chr3_3:85158035-85158054 | None:intergenic | 15.0% |
| !!! | ATAAGATCAACAATATTTTA+AGG | - | chr3_3:85158139-85158158 | None:intergenic | 15.0% |
| !!! | ATTTTTTAACATGTTTTTGT+AGG | + | chr3_3:85158339-85158358 | Msa0479980:intron | 15.0% |
| !!! | TTTTTTAACATGTTTTTGTA+GGG | + | chr3_3:85158340-85158359 | Msa0479980:intron | 15.0% |
| !! | AAAATAAATGAATGAGTGAA+GGG | - | chr3_3:85152071-85152090 | None:intergenic | 20.0% |
| !!! | CTTTATTTCAATTCAATTGT+AGG | + | chr3_3:85152101-85152120 | Msa0479980:intron | 20.0% |
| !! | GATATTTATATCTAAGTTAC+AGG | - | chr3_3:85152655-85152674 | None:intergenic | 20.0% |
| !! | AAAAAAAGAAACATTGTCAA+AGG | - | chr3_3:85152949-85152968 | None:intergenic | 20.0% |
| !!! | TTTTGGACAATAAATAACTA+AGG | + | chr3_3:85153472-85153491 | Msa0479980:intron | 20.0% |
| !! | ATTGAAACATATACAATTCT+TGG | - | chr3_3:85153520-85153539 | None:intergenic | 20.0% |
| !! | AATTCTTTCATTTGTCAATT+AGG | - | chr3_3:85153627-85153646 | None:intergenic | 20.0% |
| !! | ATAGTCATAGGATATATAAA+GGG | - | chr3_3:85153940-85153959 | None:intergenic | 20.0% |
| !!! | AAACATATTGTTTCATGTTT+TGG | + | chr3_3:85154581-85154600 | Msa0479980:intron | 20.0% |
| !!! | ACAATATTCTTATTTCTTGT+AGG | + | chr3_3:85154636-85154655 | Msa0479980:intron | 20.0% |
| !! | ATGAATATGTGATTATAAAC+GGG | + | chr3_3:85154770-85154789 | Msa0479980:intron | 20.0% |
| !! | ATATACAAATTGCTTTAGTA+TGG | + | chr3_3:85154867-85154886 | Msa0479980:intron | 20.0% |
| !!! | TCTGAAAAATATTTTATGCA+GGG | + | chr3_3:85154934-85154953 | Msa0479980:intron | 20.0% |
| !! | AAATATTAAAGAAAGTAGCT+GGG | - | chr3_3:85155019-85155038 | None:intergenic | 20.0% |
| !! | AAAATATTAAAGAAAGTAGC+TGG | - | chr3_3:85155020-85155039 | None:intergenic | 20.0% |
| !! | ATAATTGTGATTCTTTCAAT+GGG | - | chr3_3:85155152-85155171 | None:intergenic | 20.0% |
| !! | AATAATTGTGATTCTTTCAA+TGG | - | chr3_3:85155153-85155172 | None:intergenic | 20.0% |
| !! | AATAAAATTAAGTGAAAGAG+AGG | - | chr3_3:85155258-85155277 | None:intergenic | 20.0% |
| !! | GAAAATTTATAAACCCATAT+TGG | + | chr3_3:85155511-85155530 | Msa0479980:intron | 20.0% |
| !!! | TTTGTAATTTTTCATGTGAA+AGG | + | chr3_3:85155540-85155559 | Msa0479980:intron | 20.0% |
| !!! | ATGTTTTTTCTTTTTGAAAC+TGG | + | chr3_3:85155654-85155673 | Msa0479980:intron | 20.0% |
| !! | TGTATTTGGTATTCAAATTA+CGG | + | chr3_3:85155741-85155760 | Msa0479980:intron | 20.0% |
| !!! | ATTTAAAAAATTATAGTGGG+TGG | - | chr3_3:85155786-85155805 | None:intergenic | 20.0% |
| !! | TAAATATTAAAAAAAGGACG+TGG | + | chr3_3:85155907-85155926 | Msa0479980:intron | 20.0% |
| !! | TATTATAGACAATTTAAAGG+CGG | + | chr3_3:85156107-85156126 | Msa0479980:intron | 20.0% |
| !! | AATATATCAATGGTTATCAA+TGG | + | chr3_3:85156215-85156234 | Msa0479980:intron | 20.0% |
| !! | AATGAATGTCTGTTTATAAA+TGG | + | chr3_3:85156470-85156489 | Msa0479980:intron | 20.0% |
| !! | ATGAATGTCTGTTTATAAAT+GGG | + | chr3_3:85156471-85156490 | Msa0479980:intron | 20.0% |
| !! | AGATGTTAGAATATATCATA+TGG | + | chr3_3:85156964-85156983 | Msa0479980:intron | 20.0% |
| !! | TACAGTTAAACTAGTATAAA+TGG | - | chr3_3:85157013-85157032 | None:intergenic | 20.0% |
| !! | AAGTATAAAAGGGATAATTA+TGG | - | chr3_3:85157339-85157358 | None:intergenic | 20.0% |
| !! | GAAAAAATTCAAAAAGTTCT+TGG | - | chr3_3:85157503-85157522 | None:intergenic | 20.0% |
| !!! | TTTGAATTTTTTCAATCAAC+TGG | + | chr3_3:85157510-85157529 | Msa0479980:CDS | 20.0% |
| !!! | TAACTTTAGCTTTTCATTTA+CGG | - | chr3_3:85157572-85157591 | None:intergenic | 20.0% |
| !! | TGATTAAGAAAATAACTATG+AGG | - | chr3_3:85157907-85157926 | None:intergenic | 20.0% |
| !! | AATTATGAATGAAAATATCC+GGG | - | chr3_3:85158034-85158053 | None:intergenic | 20.0% |
| !! | AAAAATATATGTATGAGCAA+AGG | - | chr3_3:85158325-85158344 | None:intergenic | 20.0% |
| !! | TTGTTTCAAGATTAAAACTT+AGG | + | chr3_3:85158638-85158657 | Msa0479980:three_prime_UTR | 20.0% |
| !! | AAATAAAAAACATGATGGTG+GGG | - | chr3_3:85151985-85152004 | None:intergenic | 25.0% |
| ! | GAAATAAAAAACATGATGGT+GGG | - | chr3_3:85151986-85152005 | None:intergenic | 25.0% |
| ! | TTGTAAGCAACAAAAGTTAA+CGG | - | chr3_3:85152029-85152048 | None:intergenic | 25.0% |
| ! | CAAAATAAATGAATGAGTGA+AGG | - | chr3_3:85152072-85152091 | None:intergenic | 25.0% |
| ! | GACAAACTTTAGGTATAAAA+TGG | - | chr3_3:85152607-85152626 | None:intergenic | 25.0% |
| !! | TCTAAAATTGAAGGAATTTG+TGG | + | chr3_3:85152703-85152722 | Msa0479980:intron | 25.0% |
| ! | ATATATCAATATAACTGTCG+TGG | - | chr3_3:85152752-85152771 | None:intergenic | 25.0% |
| ! | CATTACCTAAAAAAAAAGGT+TGG | - | chr3_3:85152863-85152882 | None:intergenic | 25.0% |
| ! | GATGCATTACCTAAAAAAAA+AGG | - | chr3_3:85152867-85152886 | None:intergenic | 25.0% |
| !!! | ATGTTTTTGATATGCCTATT+CGG | + | chr3_3:85153165-85153184 | Msa0479980:CDS | 25.0% |
| !! | TGATATTTGTTACAGCTATA+TGG | - | chr3_3:85153325-85153344 | None:intergenic | 25.0% |
| ! | ATATAGCTGTAACAAATATC+AGG | + | chr3_3:85153324-85153343 | Msa0479980:intron | 25.0% |
| ! | AAAATGATTGAGTATTTCCA+CGG | - | chr3_3:85153367-85153386 | None:intergenic | 25.0% |
| !! | TTTATCATTTTGAATTGCTC+TGG | + | chr3_3:85153391-85153410 | Msa0479980:intron | 25.0% |
| ! | GACAATAAATAACTAAGGTT+TGG | + | chr3_3:85153477-85153496 | Msa0479980:intron | 25.0% |
| ! | TCTTTCACTTTACATATGAT+AGG | + | chr3_3:85153589-85153608 | Msa0479980:intron | 25.0% |
| ! | CTTTCACTTTACATATGATA+GGG | + | chr3_3:85153590-85153609 | Msa0479980:intron | 25.0% |
| ! | CCAGAATTTATTCTAATGTA+AGG | - | chr3_3:85153653-85153672 | None:intergenic | 25.0% |
| ! | CCTTACATTAGAATAAATTC+TGG | + | chr3_3:85153650-85153669 | Msa0479980:intron | 25.0% |
| !!! | TAGAATAAATTCTGGAATAC+TGG | + | chr3_3:85153658-85153677 | Msa0479980:intron | 25.0% |
| !!! | AGAATAAATTCTGGAATACT+GGG | + | chr3_3:85153659-85153678 | Msa0479980:intron | 25.0% |
| ! | ATAGGATATATAAAGGGAAA+AGG | - | chr3_3:85153934-85153953 | None:intergenic | 25.0% |
| ! | GATAGTCATAGGATATATAA+AGG | - | chr3_3:85153941-85153960 | None:intergenic | 25.0% |
| ! | TTCAACAAAAACTATTAGTG+AGG | + | chr3_3:85154113-85154132 | Msa0479980:CDS | 25.0% |
| ! | TGAATATGTGATTATAAACG+GGG | + | chr3_3:85154771-85154790 | Msa0479980:intron | 25.0% |
| !! | TTTCTTTCTTTTAATGTAGC+AGG | - | chr3_3:85154910-85154929 | None:intergenic | 25.0% |
| !! | GTCTGAAAAATATTTTATGC+AGG | + | chr3_3:85154933-85154952 | Msa0479980:intron | 25.0% |
| !! | AATATTTTATGCAGGGATAA+TGG | + | chr3_3:85154941-85154960 | Msa0479980:intron | 25.0% |
| ! | AATATTAAAGAAAGTAGCTG+GGG | - | chr3_3:85155018-85155037 | None:intergenic | 25.0% |
| ! | TAATTGTGATTCTTTCAATG+GGG | - | chr3_3:85155151-85155170 | None:intergenic | 25.0% |
| !!! | AAATTGCGTTTTGATTTTAC+TGG | + | chr3_3:85155340-85155359 | Msa0479980:intron | 25.0% |
| !!! | CTCGGTTCTATTTTTAAAAT+AGG | - | chr3_3:85155368-85155387 | None:intergenic | 25.0% |
| !!! | TCGTTATCTTCTGAAAATTT+TGG | + | chr3_3:85155627-85155646 | Msa0479980:intron | 25.0% |
| !!! | TTTTTGAAACTGGAAAAATC+TGG | + | chr3_3:85155664-85155683 | Msa0479980:intron | 25.0% |
| ! | ATTTATGTGACTTTGCTTAA+GGG | + | chr3_3:85155687-85155706 | Msa0479980:intron | 25.0% |
| ! | CTTGAATTTGATGTTGTATT+TGG | + | chr3_3:85155727-85155746 | Msa0479980:intron | 25.0% |
| !! | TTTTCCAGATCTGAATTTTT+AGG | + | chr3_3:85155977-85155996 | Msa0479980:intron | 25.0% |
| ! | TTGATGAAGACGAATAATAA+TGG | + | chr3_3:85156022-85156041 | Msa0479980:intron | 25.0% |
| ! | CTATAATAAAAGTTGGGAAT+GGG | - | chr3_3:85156095-85156114 | None:intergenic | 25.0% |
| ! | TCTATAATAAAAGTTGGGAA+TGG | - | chr3_3:85156096-85156115 | None:intergenic | 25.0% |
| ! | ATTATAGACAATTTAAAGGC+GGG | + | chr3_3:85156108-85156127 | Msa0479980:intron | 25.0% |
| ! | ATTCATATATCATCCAATCT+GGG | - | chr3_3:85156453-85156472 | None:intergenic | 25.0% |
| !!! | CAAGTTGATTCTTAGAATTT+GGG | - | chr3_3:85156545-85156564 | None:intergenic | 25.0% |
| ! | TATATATATATAACCGATGC+AGG | + | chr3_3:85156837-85156856 | Msa0479980:intron | 25.0% |
| !!! | CTATTTTGTCTCTAAAAATG+AGG | - | chr3_3:85156882-85156901 | None:intergenic | 25.0% |
| ! | AAACTAGTATAAATGGTTCT+AGG | - | chr3_3:85157006-85157025 | None:intergenic | 25.0% |
| !! | TTTTCCCTTGATTACAATTA+GGG | - | chr3_3:85157149-85157168 | None:intergenic | 25.0% |
| !! | TTTTTCCCTTGATTACAATT+AGG | - | chr3_3:85157150-85157169 | None:intergenic | 25.0% |
| !! | ATTGCAATAAGACGTTATTT+TGG | - | chr3_3:85157278-85157297 | None:intergenic | 25.0% |
| !! | CAATCGCAAAAAGTATAAAA+GGG | - | chr3_3:85157349-85157368 | None:intergenic | 25.0% |
| !! | ACAATCGCAAAAAGTATAAA+AGG | - | chr3_3:85157350-85157369 | None:intergenic | 25.0% |
| !!! | AACTTTAGCTTTTCATTTAC+GGG | - | chr3_3:85157571-85157590 | None:intergenic | 25.0% |
| ! | AAATCTTATAGAAGCAACAT+GGG | - | chr3_3:85157653-85157672 | None:intergenic | 25.0% |
| !! | TCTACTAGTAGATATCTTTT+AGG | + | chr3_3:85157696-85157715 | Msa0479980:intron | 25.0% |
| !! | CTACTAGTAGATATCTTTTA+GGG | + | chr3_3:85157697-85157716 | Msa0479980:intron | 25.0% |
| !! | GAAAATAACTATGAGGATTT+TGG | - | chr3_3:85157900-85157919 | None:intergenic | 25.0% |
| !! | TATTTTGTTGCATGATACTT+TGG | + | chr3_3:85158378-85158397 | Msa0479980:CDS | 25.0% |
| ! | GGTTTCTGATAAAATTATAC+AGG | + | chr3_3:85158592-85158611 | Msa0479980:three_prime_UTR | 25.0% |
| ! | CAAGATTAAAACTTAGGATT+TGG | + | chr3_3:85158644-85158663 | Msa0479980:three_prime_UTR | 25.0% |
| ! | ATTAAAACTTAGGATTTGGA+TGG | + | chr3_3:85158648-85158667 | Msa0479980:three_prime_UTR | 25.0% |
| !!! | GTGAAATTTTAATGCTCAAA+TGG | + | chr3_3:85158670-85158689 | Msa0479980:three_prime_UTR | 25.0% |
| AAGAGAAGAGAACATAAATG+AGG | - | chr3_3:85151917-85151936 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAAGAAAAAG+AGG | - | chr3_3:85151955-85151974 | None:intergenic | 30.0% | |
| !! | AATAAAAAACATGATGGTGG+GGG | - | chr3_3:85151984-85152003 | None:intergenic | 30.0% |
| GGAAATAAAAAACATGATGG+TGG | - | chr3_3:85151987-85152006 | None:intergenic | 30.0% | |
| AGCGGAAATAAAAAACATGA+TGG | - | chr3_3:85151990-85152009 | None:intergenic | 30.0% | |
| ! | ATAAGAAAGAAGTAGCCTTT+TGG | - | chr3_3:85152157-85152176 | None:intergenic | 30.0% |
| ACTTCTTTCTTATCAATCCT+TGG | + | chr3_3:85152164-85152183 | Msa0479980:CDS | 30.0% | |
| ! | TTTTTGGACAATAAGTCAGA+TGG | - | chr3_3:85152403-85152422 | None:intergenic | 30.0% |
| ATTCATGTACTACAGAATGA+TGG | - | chr3_3:85152471-85152490 | None:intergenic | 30.0% | |
| AATGCATTGTAGATGATCAT+TGG | - | chr3_3:85152536-85152555 | None:intergenic | 30.0% | |
| ! | GTATTGATCGCATTATGATT+TGG | + | chr3_3:85153239-85153258 | Msa0479980:intron | 30.0% |
| AAGATTTATAGCATTTCCGT+TGG | - | chr3_3:85153289-85153308 | None:intergenic | 30.0% | |
| ACGGAAATGCTATAAATCTT+AGG | + | chr3_3:85153289-85153308 | Msa0479980:intron | 30.0% | |
| ! | GCAGACAAACATTTAGATTT+TGG | + | chr3_3:85153455-85153474 | Msa0479980:intron | 30.0% |
| AAGACAATGAGAAAATCAGA+GGG | - | chr3_3:85153774-85153793 | None:intergenic | 30.0% | |
| AAAGACAATGAGAAAATCAG+AGG | - | chr3_3:85153775-85153794 | None:intergenic | 30.0% | |
| TATATAAAGGGAAAAGGAAG+TGG | - | chr3_3:85153928-85153947 | None:intergenic | 30.0% | |
| ! | ATGCTATGATTGATAGTCAT+AGG | - | chr3_3:85153952-85153971 | None:intergenic | 30.0% |
| TCATAGCATCTAGTAATAAG+AGG | + | chr3_3:85153963-85153982 | Msa0479980:intron | 30.0% | |
| !! | GTGATCAACATATAATGGAT+TGG | + | chr3_3:85153987-85154006 | Msa0479980:intron | 30.0% |
| ! | TTAGCTATCAAATTTTCCTG+CGG | + | chr3_3:85154045-85154064 | Msa0479980:intron | 30.0% |
| ATTAATTACCACCACTGAAT+GGG | - | chr3_3:85154262-85154281 | None:intergenic | 30.0% | |
| TATTAATTACCACCACTGAA+TGG | - | chr3_3:85154263-85154282 | None:intergenic | 30.0% | |
| TCAAACTCAATAAGAAGGTT+CGG | + | chr3_3:85154352-85154371 | Msa0479980:CDS | 30.0% | |
| TAAGAAAGAAGGCAATGATA+AGG | - | chr3_3:85154450-85154469 | None:intergenic | 30.0% | |
| TATGTAGTGTGAATTTACTC+TGG | + | chr3_3:85154673-85154692 | Msa0479980:intron | 30.0% | |
| !! | ATCTAGCTTTCAGCTAATAT+GGG | - | chr3_3:85154992-85155011 | None:intergenic | 30.0% |
| !! | TATCTAGCTTTCAGCTAATA+TGG | - | chr3_3:85154993-85155012 | None:intergenic | 30.0% |
| TTTATCTGTGAGAAAACCTT+AGG | + | chr3_3:85155038-85155057 | Msa0479980:intron | 30.0% | |
| AATTGTGATTCTTTCAATGG+GGG | - | chr3_3:85155150-85155169 | None:intergenic | 30.0% | |
| AAGAAGAAAGATGAGATTCA+TGG | - | chr3_3:85155481-85155500 | None:intergenic | 30.0% | |
| GATTTATGTGACTTTGCTTA+AGG | + | chr3_3:85155686-85155705 | Msa0479980:intron | 30.0% | |
| TTTATGTGACTTTGCTTAAG+GGG | + | chr3_3:85155688-85155707 | Msa0479980:intron | 30.0% | |
| !! | TAAAAAATTATAGTGGGTGG+AGG | - | chr3_3:85155783-85155802 | None:intergenic | 30.0% |
| TCTTCCTAAAAATTCAGATC+TGG | - | chr3_3:85155984-85156003 | None:intergenic | 30.0% | |
| TTATAGACAATTTAAAGGCG+GGG | + | chr3_3:85156109-85156128 | Msa0479980:intron | 30.0% | |
| TCAATGGATGAGAAAGTAAT+TGG | + | chr3_3:85156231-85156250 | Msa0479980:intron | 30.0% | |
| ATGAGAAAGTAATTGGTGTA+TGG | + | chr3_3:85156238-85156257 | Msa0479980:intron | 30.0% | |
| ! | ACAAATTTGTGTTTTGTGCA+TGG | + | chr3_3:85156264-85156283 | Msa0479980:intron | 30.0% |
| CATTCATATATCATCCAATC+TGG | - | chr3_3:85156454-85156473 | None:intergenic | 30.0% | |
| ! | CCTTACAAAACTAACTTGTA+AGG | - | chr3_3:85156507-85156526 | None:intergenic | 30.0% |
| !!! | CCTTACAAGTTAGTTTTGTA+AGG | + | chr3_3:85156504-85156523 | Msa0479980:intron | 30.0% |
| !!! | TAGTTTTGTAAGGTTGAGTT+AGG | + | chr3_3:85156514-85156533 | Msa0479980:intron | 30.0% |
| ! | TGATTCTTAGAATTTGGGTT+GGG | - | chr3_3:85156540-85156559 | None:intergenic | 30.0% |
| TTGATTCTTAGAATTTGGGT+TGG | - | chr3_3:85156541-85156560 | None:intergenic | 30.0% | |
| !! | GCAAGTTGATTCTTAGAATT+TGG | - | chr3_3:85156546-85156565 | None:intergenic | 30.0% |
| TCCAAAGTATGGTCAATAAA+GGG | + | chr3_3:85157074-85157093 | Msa0479980:intron | 30.0% | |
| TACAATTAGGGTTACATACA+TGG | - | chr3_3:85157137-85157156 | None:intergenic | 30.0% | |
| TGTAACCCTAATTGTAATCA+AGG | + | chr3_3:85157141-85157160 | Msa0479980:intron | 30.0% | |
| GTAACCCTAATTGTAATCAA+GGG | + | chr3_3:85157142-85157161 | Msa0479980:intron | 30.0% | |
| !!! | GAATTTTTTCAATCAACTGG+AGG | + | chr3_3:85157513-85157532 | Msa0479980:CDS | 30.0% |
| !!! | ACTTTAGCTTTTCATTTACG+GGG | - | chr3_3:85157570-85157589 | None:intergenic | 30.0% |
| AAACTGATACTTACAATGGA+TGG | - | chr3_3:85157628-85157647 | None:intergenic | 30.0% | |
| GGTAAAACTGATACTTACAA+TGG | - | chr3_3:85157632-85157651 | None:intergenic | 30.0% | |
| GAAATCTTATAGAAGCAACA+TGG | - | chr3_3:85157654-85157673 | None:intergenic | 30.0% | |
| TGCTTCTATAAGATTTCTCA+TGG | + | chr3_3:85157657-85157676 | Msa0479980:intron | 30.0% | |
| ! | ATAACTATGAGGATTTTGGA+GGG | - | chr3_3:85157896-85157915 | None:intergenic | 30.0% |
| ! | AATAACTATGAGGATTTTGG+AGG | - | chr3_3:85157897-85157916 | None:intergenic | 30.0% |
| TCACACTTACCAACTTATTT+AGG | + | chr3_3:85157963-85157982 | Msa0479980:intron | 30.0% | |
| !! | TCTCCATCATTTTTGTAAGA+TGG | + | chr3_3:85158251-85158270 | Msa0479980:intron | 30.0% |
| GATCCATCTTACAAAAATGA+TGG | - | chr3_3:85158257-85158276 | None:intergenic | 30.0% | |
| TTATTTGGGTGTGGATTTAT+TGG | - | chr3_3:85158458-85158477 | None:intergenic | 30.0% | |
| TAAATCCACACCCAAATAAA+TGG | + | chr3_3:85158459-85158478 | Msa0479980:exon | 30.0% | |
| ACTACCTCAACCATTTATTT+GGG | - | chr3_3:85158472-85158491 | None:intergenic | 30.0% | |
| TACTACCTCAACCATTTATT+TGG | - | chr3_3:85158473-85158492 | None:intergenic | 30.0% | |
| GTACTAAACTTCATTTACTC+AGG | + | chr3_3:85158502-85158521 | Msa0479980:three_prime_UTR | 30.0% | |
| AACTTCATTTACTCAGGATT+AGG | + | chr3_3:85158508-85158527 | Msa0479980:three_prime_UTR | 30.0% | |
| CTCAAGCAAAATATTCTCAT+TGG | - | chr3_3:85158573-85158592 | None:intergenic | 30.0% | |
| ! | CAATGAGAATATTTTGCTTG+AGG | + | chr3_3:85158571-85158590 | Msa0479980:three_prime_UTR | 30.0% |
| ! | CTCAAATGGTTAAGTTGTTA+TGG | + | chr3_3:85158684-85158703 | Msa0479980:three_prime_UTR | 30.0% |
| !! | AAAAAGAGGTACCTAACTAG+CGG | - | chr3_3:85151941-85151960 | None:intergenic | 35.0% |
| !! | GTAGGTTGATTCTTCAGTTA+TGG | + | chr3_3:85152119-85152138 | Msa0479980:intron | 35.0% |
| TTTCTTATCAATCCTTGGCA+CGG | + | chr3_3:85152169-85152188 | Msa0479980:CDS | 35.0% | |
| GAATGCAATGTACCAAGATA+CGG | - | chr3_3:85152254-85152273 | None:intergenic | 35.0% | |
| !! | AGTAGAAGTAGAAAAGCGTT+GGG | - | chr3_3:85152365-85152384 | None:intergenic | 35.0% |
| TCTGTAGTACATGAATATGC+TGG | + | chr3_3:85152475-85152494 | Msa0479980:intron | 35.0% | |
| TTGCATGAGATAAAGCAGAA+AGG | - | chr3_3:85152505-85152524 | None:intergenic | 35.0% | |
| CTTGAGTCTTGACAAACTTT+AGG | - | chr3_3:85152617-85152636 | None:intergenic | 35.0% | |
| !! | TGCTTCTGCTCTAAAATTGA+AGG | + | chr3_3:85152694-85152713 | Msa0479980:intron | 35.0% |
| !!! | GTGCTCCAACCTTTTTTTTT+AGG | + | chr3_3:85152855-85152874 | Msa0479980:intron | 35.0% |
| CTTTGTTCTCGTTCTTGAAA+AGG | - | chr3_3:85152893-85152912 | None:intergenic | 35.0% | |
| !! | AACTCATCTAGTCTTGATCA+TGG | + | chr3_3:85153003-85153022 | Msa0479980:intron | 35.0% |
| !! | ACTCATCTAGTCTTGATCAT+GGG | + | chr3_3:85153004-85153023 | Msa0479980:intron | 35.0% |
| AACTTTCACAACGAAGACAA+GGG | + | chr3_3:85153122-85153141 | Msa0479980:CDS | 35.0% | |
| ! | TTTTGATATGCCTATTCGGA+AGG | + | chr3_3:85153169-85153188 | Msa0479980:CDS | 35.0% |
| TGAACTATATCCTTCCGAAT+AGG | - | chr3_3:85153182-85153201 | None:intergenic | 35.0% | |
| ATAATGCGATCAATACCTGT+TGG | - | chr3_3:85153235-85153254 | None:intergenic | 35.0% | |
| ! | ATGATTTGGAACCATTGAAC+TGG | + | chr3_3:85153253-85153272 | Msa0479980:intron | 35.0% |
| ! | TGATTTGGAACCATTGAACT+GGG | + | chr3_3:85153254-85153273 | Msa0479980:intron | 35.0% |
| TGTATTCAATTGTTGAACCG+TGG | + | chr3_3:85153347-85153366 | Msa0479980:intron | 35.0% | |
| !!! | TCTCATTGATTTTTGCCAAC+AGG | + | chr3_3:85154083-85154102 | Msa0479980:intron | 35.0% |
| !!! | CTCATTGATTTTTGCCAACA+GGG | + | chr3_3:85154084-85154103 | Msa0479980:intron | 35.0% |
| AAAACTATTAGTGAGGTCAG+TGG | + | chr3_3:85154120-85154139 | Msa0479980:CDS | 35.0% | |
| AAACTATTAGTGAGGTCAGT+GGG | + | chr3_3:85154121-85154140 | Msa0479980:CDS | 35.0% | |
| TAAAGAATGTTCTGTACCTG+AGG | - | chr3_3:85154210-85154229 | None:intergenic | 35.0% | |
| AATGGGAGGAGGAATAAAAT+GGG | - | chr3_3:85154245-85154264 | None:intergenic | 35.0% | |
| TTAATGAATGGCAACAGTTC+AGG | + | chr3_3:85154286-85154305 | Msa0479980:intron | 35.0% | |
| TAATGAATGGCAACAGTTCA+GGG | + | chr3_3:85154287-85154306 | Msa0479980:intron | 35.0% | |
| CGCTTTCAAACTCAATAAGA+AGG | + | chr3_3:85154347-85154366 | Msa0479980:CDS | 35.0% | |
| AATGATAAGGAGAGTGATAG+AGG | - | chr3_3:85154437-85154456 | None:intergenic | 35.0% | |
| CAATGTTAAGAGTCTCACAT+TGG | + | chr3_3:85154735-85154754 | Msa0479980:intron | 35.0% | |
| GAGAGGTGAAATTTACCTAA+CGG | - | chr3_3:85155241-85155260 | None:intergenic | 35.0% | |
| AATAATCCATTGAAGAGTGG+AGG | - | chr3_3:85155441-85155460 | None:intergenic | 35.0% | |
| TGGAATAATCCATTGAAGAG+TGG | - | chr3_3:85155444-85155463 | None:intergenic | 35.0% | |
| AAGAAAGATGAGATTCATGG+TGG | - | chr3_3:85155478-85155497 | None:intergenic | 35.0% | |
| TGCTTAAGGGGTAATATGAA+TGG | + | chr3_3:85155700-85155719 | Msa0479980:intron | 35.0% | |
| GCAGATATGAACATTTCTTG+TGG | + | chr3_3:85155948-85155967 | Msa0479980:intron | 35.0% | |
| TAACCCAACTATACAAAACC+GGG | - | chr3_3:85156300-85156319 | None:intergenic | 35.0% | |
| CTAACCCAACTATACAAAAC+CGG | - | chr3_3:85156301-85156320 | None:intergenic | 35.0% | |
| ! | CAAAACTAACTTGTAAGGTG+AGG | - | chr3_3:85156502-85156521 | None:intergenic | 35.0% |
| CTCCAAAGTATGGTCAATAA+AGG | + | chr3_3:85157073-85157092 | Msa0479980:intron | 35.0% | |
| ACCCTTTATTGACCATACTT+TGG | - | chr3_3:85157078-85157097 | None:intergenic | 35.0% | |
| TCATTGAACTCAAAGAAAGC+CGG | - | chr3_3:85157227-85157246 | None:intergenic | 35.0% | |
| TATACAGCTTCTAGTGTTTG+AGG | + | chr3_3:85157453-85157472 | Msa0479980:intron | 35.0% | |
| !!! | AAGTTCTTGGTTTTATGCGT+GGG | - | chr3_3:85157490-85157509 | None:intergenic | 35.0% |
| !!! | AAAGTTCTTGGTTTTATGCG+TGG | - | chr3_3:85157491-85157510 | None:intergenic | 35.0% |
| ATCTACGATCAGAAGTTTCT+TGG | - | chr3_3:85157542-85157561 | None:intergenic | 35.0% | |
| AAACTTCTGATCGTAGATGA+CGG | + | chr3_3:85157544-85157563 | Msa0479980:CDS | 35.0% | |
| !! | TAACTATGAGGATTTTGGAG+GGG | - | chr3_3:85157895-85157914 | None:intergenic | 35.0% |
| GGAAACTCTCCTAAATAAGT+TGG | - | chr3_3:85157975-85157994 | None:intergenic | 35.0% | |
| TAGATTCTTCAGTCTGAGTT+TGG | + | chr3_3:85158169-85158188 | Msa0479980:intron | 35.0% | |
| AATTCTGTTCACAGCATCTT+TGG | - | chr3_3:85158410-85158429 | None:intergenic | 35.0% | |
| TGTTACAGAAATGAGGACAT+GGG | - | chr3_3:85158543-85158562 | None:intergenic | 35.0% | |
| ATCACTGTGTTACAGAAATG+AGG | - | chr3_3:85158550-85158569 | None:intergenic | 35.0% | |
| ! | GAGAACCAACAGGTTTGTTT+CGG | - | chr3_3:85151864-85151883 | None:intergenic | 40.0% |
| !! | GAAACAAACCTGTTGGTTCT+CGG | + | chr3_3:85151863-85151882 | Msa0479980:five_prime_UTR | 40.0% |
| GGCAATTTGAGCTTAACTAG+CGG | - | chr3_3:85152008-85152027 | None:intergenic | 40.0% | |
| TGGCTTCTTTCATCTCCAAA+AGG | + | chr3_3:85152139-85152158 | Msa0479980:CDS | 40.0% | |
| ! | CAGTAGAAGTAGAAAAGCGT+TGG | - | chr3_3:85152366-85152385 | None:intergenic | 40.0% |
| TGAGCGTGATATAGGTATGA+AGG | + | chr3_3:85152438-85152457 | Msa0479980:intron | 40.0% | |
| AATTGAAGGAATTTGTGGCC+AGG | + | chr3_3:85152708-85152727 | Msa0479980:intron | 40.0% | |
| ATTGAAGGAATTTGTGGCCA+GGG | + | chr3_3:85152709-85152728 | Msa0479980:intron | 40.0% | |
| AAGACCCAAAAGTTAAACCC+TGG | - | chr3_3:85152729-85152748 | None:intergenic | 40.0% | |
| AGATGAGTTGCCATGATAGA+TGG | - | chr3_3:85152992-85153011 | None:intergenic | 40.0% | |
| AATGTGGTTCATTATGCTGC+AGG | + | chr3_3:85153068-85153087 | Msa0479980:intron | 40.0% | |
| ATGTGGTTCATTATGCTGCA+GGG | + | chr3_3:85153069-85153088 | Msa0479980:intron | 40.0% | |
| !! | TCGTTGTGAAAGTTGGTAAC+TGG | - | chr3_3:85153116-85153135 | None:intergenic | 40.0% |
| CTTGTCTTCGTTGTGAAAGT+TGG | - | chr3_3:85153123-85153142 | None:intergenic | 40.0% | |
| CAACTTTCACAACGAAGACA+AGG | + | chr3_3:85153121-85153140 | Msa0479980:CDS | 40.0% | |
| !!! | AAGGGCTTTATGGTTTTAGC+TGG | + | chr3_3:85153140-85153159 | Msa0479980:CDS | 40.0% |
| !!! | TAGTTCACCGTGTTGTTTTG+TGG | + | chr3_3:85153195-85153214 | Msa0479980:CDS | 40.0% |
| GATTACATGTCCCAGTTCAA+TGG | - | chr3_3:85153267-85153286 | None:intergenic | 40.0% | |
| AACTGGGACATGTAATCCAA+CGG | + | chr3_3:85153270-85153289 | Msa0479980:intron | 40.0% | |
| ! | AGAATTGTGTAGAGAGGCAT+CGG | - | chr3_3:85153730-85153749 | None:intergenic | 40.0% |
| ACAATGAGAAAATCAGAGGG+CGG | - | chr3_3:85153771-85153790 | None:intergenic | 40.0% | |
| TCCTTGATATGTGACAGCAA+GGG | - | chr3_3:85153828-85153847 | None:intergenic | 40.0% | |
| ATCCTTGATATGTGACAGCA+AGG | - | chr3_3:85153829-85153848 | None:intergenic | 40.0% | |
| GAGGCGTGATCAACATATAA+TGG | + | chr3_3:85153982-85154001 | Msa0479980:intron | 40.0% | |
| AAAACAAGTAACATAGCCGC+AGG | - | chr3_3:85154064-85154083 | None:intergenic | 40.0% | |
| TTGTTGAATGAGTTCCCTGT+TGG | - | chr3_3:85154101-85154120 | None:intergenic | 40.0% | |
| AGAAAGCCTTGGAACCAAAA+GGG | + | chr3_3:85154150-85154169 | Msa0479980:CDS | 40.0% | |
| GAATGGGAGGAGGAATAAAA+TGG | - | chr3_3:85154246-85154265 | None:intergenic | 40.0% | |
| AATGAATGGCAACAGTTCAG+GGG | + | chr3_3:85154288-85154307 | Msa0479980:intron | 40.0% | |
| ! | TGAGTTTGAAAGCGTGACTT+CGG | - | chr3_3:85154341-85154360 | None:intergenic | 40.0% |
| TAATAGTTTACCAGCCAAGC+TGG | + | chr3_3:85154605-85154624 | Msa0479980:intron | 40.0% | |
| TTGTAAATGCCACCCAAAAC+CGG | - | chr3_3:85154816-85154835 | None:intergenic | 40.0% | |
| TAGCTTTCAGCTAATATGGG+AGG | - | chr3_3:85154989-85155008 | None:intergenic | 40.0% | |
| ! | ACCGAGCCTCTAAAAACTAT+GGG | + | chr3_3:85155099-85155118 | Msa0479980:intron | 40.0% |
| !! | TTGAGGCCCATAGTTTTTAG+AGG | - | chr3_3:85155108-85155127 | None:intergenic | 40.0% |
| !! | ATTTACCTAACGGTGTCGTT+TGG | - | chr3_3:85155231-85155250 | None:intergenic | 40.0% |
| TTCCTATGAAATAGGAGGCT+CGG | - | chr3_3:85155386-85155405 | None:intergenic | 40.0% | |
| AGCCTCCTATTTCATAGGAA+CGG | + | chr3_3:85155386-85155405 | Msa0479980:intron | 40.0% | |
| GTTTCAATAGCCTAAGGTCA+GGG | - | chr3_3:85155412-85155431 | None:intergenic | 40.0% | |
| ! | TCATGGTGGTAATGCATAAC+TGG | - | chr3_3:85155464-85155483 | None:intergenic | 40.0% |
| !!! | GGGGTCACTATTTTTGTTGT+TGG | + | chr3_3:85156128-85156147 | Msa0479980:intron | 40.0% |
| CGACAGTTCAGATCAAAAGT+TGG | - | chr3_3:85156183-85156202 | None:intergenic | 40.0% | |
| AACCCAACTATACAAAACCG+GGG | - | chr3_3:85156299-85156318 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTATAGTTGGGTT+AGG | + | chr3_3:85156299-85156318 | Msa0479980:intron | 40.0% |
| ! | GATTGTGGAAACTTGATAGC+AGG | - | chr3_3:85156378-85156397 | None:intergenic | 40.0% |
| GCTATCAAGTTTCCACAATC+AGG | + | chr3_3:85156378-85156397 | Msa0479980:intron | 40.0% | |
| ACGCTTCAGATGTGAATCTT+GGG | + | chr3_3:85156403-85156422 | Msa0479980:intron | 40.0% | |
| TTTAGAAGAACAGCCTGCAT+CGG | - | chr3_3:85156853-85156872 | None:intergenic | 40.0% | |
| ! | GTCTTCACAGAATTGCTGTT+CGG | + | chr3_3:85156910-85156929 | Msa0479980:intron | 40.0% |
| TGTTTGTGTACACTGATCTC+TGG | + | chr3_3:85157420-85157439 | Msa0479980:intron | 40.0% | |
| GCTTCTAGTGTTTGAGGATT+TGG | + | chr3_3:85157459-85157478 | Msa0479980:intron | 40.0% | |
| TCTAGTGTTTGAGGATTTGG+AGG | + | chr3_3:85157462-85157481 | Msa0479980:CDS | 40.0% | |
| !!! | TCTTTTAGGGTATGTTGCGA+TGG | + | chr3_3:85157710-85157729 | Msa0479980:intron | 40.0% |
| AAGTGTGAGAAGAACAATGG+AGG | - | chr3_3:85157951-85157970 | None:intergenic | 40.0% | |
| GGTAAGTGTGAGAAGAACAA+TGG | - | chr3_3:85157954-85157973 | None:intergenic | 40.0% | |
| TTTCCTCATCTTCTCCTCAA+AGG | + | chr3_3:85157990-85158009 | Msa0479980:intron | 40.0% | |
| TTCCTCATCTTCTCCTCAAA+GGG | + | chr3_3:85157991-85158010 | Msa0479980:intron | 40.0% | |
| AGTGAAGTTGAACAGTGAAG+CGG | - | chr3_3:85158115-85158134 | None:intergenic | 40.0% | |
| GGTGTGGATTTATTGGAGAT+TGG | - | chr3_3:85158451-85158470 | None:intergenic | 40.0% | |
| CTCAACCATTTATTTGGGTG+TGG | - | chr3_3:85158467-85158486 | None:intergenic | 40.0% | |
| CACACCCAAATAAATGGTTG+AGG | + | chr3_3:85158465-85158484 | Msa0479980:exon | 40.0% | |
| GTTACAGAAATGAGGACATG+GGG | - | chr3_3:85158542-85158561 | None:intergenic | 40.0% | |
| GTGTTACAGAAATGAGGACA+TGG | - | chr3_3:85158544-85158563 | None:intergenic | 40.0% | |
| !! | GTTTCGGAGAGATGGGTTTT+GGG | - | chr3_3:85151848-85151867 | None:intergenic | 45.0% |
| !! | TGTTTCGGAGAGATGGGTTT+TGG | - | chr3_3:85151849-85151868 | None:intergenic | 45.0% |
| ! | CAGGTTTGTTTCGGAGAGAT+GGG | - | chr3_3:85151855-85151874 | None:intergenic | 45.0% |
| ! | ACAGGTTTGTTTCGGAGAGA+TGG | - | chr3_3:85151856-85151875 | None:intergenic | 45.0% |
| TCTCTCCGAAACAAACCTGT+TGG | + | chr3_3:85151856-85151875 | Msa0479980:five_prime_UTR | 45.0% | |
| CATTTCTGCTCACCGTATCT+TGG | + | chr3_3:85152239-85152258 | Msa0479980:CDS | 45.0% | |
| !! | AAAGCGTTGGGTGATTGATC+CGG | - | chr3_3:85152353-85152372 | None:intergenic | 45.0% |
| ! | AGATGTTGCGAGAGGCTTTT+TGG | - | chr3_3:85152419-85152438 | None:intergenic | 45.0% |
| GCAACATCTGAGCGTGATAT+AGG | + | chr3_3:85152430-85152449 | Msa0479980:CDS | 45.0% | |
| !! | TGTGGCCAGGGTTTAACTTT+TGG | + | chr3_3:85152721-85152740 | Msa0479980:intron | 45.0% |
| !! | GTGGCCAGGGTTTAACTTTT+GGG | + | chr3_3:85152722-85152741 | Msa0479980:intron | 45.0% |
| ! | TTGCCATGATAGATGGTGGT+AGG | - | chr3_3:85152985-85153004 | None:intergenic | 45.0% |
| TGAGTTGCCATGATAGATGG+TGG | - | chr3_3:85152989-85153008 | None:intergenic | 45.0% | |
| CAACGAAGACAAGGGCTTTA+TGG | + | chr3_3:85153130-85153149 | Msa0479980:CDS | 45.0% | |
| AATTGTCTGTGAGGATGGAG+TGG | + | chr3_3:85153415-85153434 | Msa0479980:intron | 45.0% | |
| !! | GAATTGTGTAGAGAGGCATC+GGG | - | chr3_3:85153729-85153748 | None:intergenic | 45.0% |
| GCAGGTAGAATTGTGTAGAG+AGG | - | chr3_3:85153736-85153755 | None:intergenic | 45.0% | |
| ! | TCCCTTGCTGTCACATATCA+AGG | + | chr3_3:85153824-85153843 | Msa0479980:intron | 45.0% |
| TCAAGTGAGCAAGAGAAGTG+AGG | - | chr3_3:85153897-85153916 | None:intergenic | 45.0% | |
| GAGAAAGCCTTGGAACCAAA+AGG | + | chr3_3:85154149-85154168 | Msa0479980:CDS | 45.0% | |
| TTATTCCTCCTCCCATTCAG+TGG | + | chr3_3:85154248-85154267 | Msa0479980:intron | 45.0% | |
| AATTACCACCACTGAATGGG+AGG | - | chr3_3:85154259-85154278 | None:intergenic | 45.0% | |
| ! | AGTTTGAAAGCGTGACTTCG+GGG | - | chr3_3:85154339-85154358 | None:intergenic | 45.0% |
| ! | GAGTTTGAAAGCGTGACTTC+GGG | - | chr3_3:85154340-85154359 | None:intergenic | 45.0% |
| AATAAGAAGGTTCGGCGACT+GGG | + | chr3_3:85154360-85154379 | Msa0479980:CDS | 45.0% | |
| TATTGTGTCTCTTGCCAGCT+TGG | - | chr3_3:85154622-85154641 | None:intergenic | 45.0% | |
| ATAGTCCTCACCTTACAAGC+CGG | + | chr3_3:85154794-85154813 | Msa0479980:intron | 45.0% | |
| !! | TCACCTTACAAGCCGGTTTT+GGG | + | chr3_3:85154801-85154820 | Msa0479980:intron | 45.0% |
| CTGTGAGAAAACCTTAGGCA+AGG | + | chr3_3:85155043-85155062 | Msa0479980:intron | 45.0% | |
| ! | CACCGAGCCTCTAAAAACTA+TGG | + | chr3_3:85155098-85155117 | Msa0479980:intron | 45.0% |
| !! | GCCCATAGTTTTTAGAGGCT+CGG | - | chr3_3:85155103-85155122 | None:intergenic | 45.0% |
| GTGATTCTTTCAATGGGGGT+GGG | - | chr3_3:85155146-85155165 | None:intergenic | 45.0% | |
| TGTGATTCTTTCAATGGGGG+TGG | - | chr3_3:85155147-85155166 | None:intergenic | 45.0% | |
| GTAGGAAAGGGGAAAACGAA+TGG | - | chr3_3:85155191-85155210 | None:intergenic | 45.0% | |
| ACATTCCAAACGACACCGTT+AGG | + | chr3_3:85155223-85155242 | Msa0479980:intron | 45.0% | |
| AACCGAGCCTCCTATTTCAT+AGG | + | chr3_3:85155381-85155400 | Msa0479980:intron | 45.0% | |
| GGTTTCAATAGCCTAAGGTC+AGG | - | chr3_3:85155413-85155432 | None:intergenic | 45.0% | |
| CGTGTGGTTTCAATAGCCTA+AGG | - | chr3_3:85155418-85155437 | None:intergenic | 45.0% | |
| AAAAGGACGTGGTACTGTTC+TGG | + | chr3_3:85155918-85155937 | Msa0479980:intron | 45.0% | |
| !! | CACCCCGGTTTTGTATAGTT+GGG | + | chr3_3:85156294-85156313 | Msa0479980:intron | 45.0% |
| TAGCCTATCCTAGAACCGTT+AGG | + | chr3_3:85156349-85156368 | Msa0479980:intron | 45.0% | |
| ! | TGTGGAAACTTGATAGCAGG+TGG | - | chr3_3:85156375-85156394 | None:intergenic | 45.0% |
| CACGCTTCAGATGTGAATCT+TGG | + | chr3_3:85156402-85156421 | Msa0479980:intron | 45.0% | |
| CTCTTAACACACACACACTC+AGG | - | chr3_3:85156429-85156448 | None:intergenic | 45.0% | |
| GTGTGTTAAGAGTCCCAGAT+TGG | + | chr3_3:85156437-85156456 | Msa0479980:intron | 45.0% | |
| CGAGTGAGTCTCCCAAAATA+TGG | + | chr3_3:85156608-85156627 | Msa0479980:intron | 45.0% | |
| GATGCAGGCTGTTCTTCTAA+AGG | + | chr3_3:85156852-85156871 | Msa0479980:intron | 45.0% | |
| ! | TCACAGAATTGCTGTTCGGT+AGG | + | chr3_3:85156914-85156933 | Msa0479980:intron | 45.0% |
| ! | CACAGAATTGCTGTTCGGTA+GGG | + | chr3_3:85156915-85156934 | Msa0479980:intron | 45.0% |
| TCGGTAGGGAGAATTGAAGT+AGG | + | chr3_3:85156929-85156948 | Msa0479980:intron | 45.0% | |
| TCTGGATGTGCATTTAGTGG+GGG | - | chr3_3:85157052-85157071 | None:intergenic | 45.0% | |
| CTCTGGATGTGCATTTAGTG+GGG | - | chr3_3:85157053-85157072 | None:intergenic | 45.0% | |
| ! | GCTCTGGATGTGCATTTAGT+GGG | - | chr3_3:85157054-85157073 | None:intergenic | 45.0% |
| !! | AGCTCTGGATGTGCATTTAG+TGG | - | chr3_3:85157055-85157074 | None:intergenic | 45.0% |
| ACATCCAGAGCTCCAAAGTA+TGG | + | chr3_3:85157063-85157082 | Msa0479980:intron | 45.0% | |
| !! | TTGACCATACTTTGGAGCTC+TGG | - | chr3_3:85157070-85157089 | None:intergenic | 45.0% |
| AACTCAAAGAAAGCCGGCAA+AGG | - | chr3_3:85157221-85157240 | None:intergenic | 45.0% | |
| ! | TTTAGGGTATGTTGCGATGG+AGG | + | chr3_3:85157713-85157732 | Msa0479980:intron | 45.0% |
| TTAGGGTATGTTGCGATGGA+GGG | + | chr3_3:85157714-85157733 | Msa0479980:intron | 45.0% | |
| ! | TATGTTGCGATGGAGGGTTT+TGG | + | chr3_3:85157720-85157739 | Msa0479980:intron | 45.0% |
| ! | AGAACAATGGAGGCTCTAGT+GGG | - | chr3_3:85157941-85157960 | None:intergenic | 45.0% |
| ! | AAGAACAATGGAGGCTCTAG+TGG | - | chr3_3:85157942-85157961 | None:intergenic | 45.0% |
| AGTTGAAGTGACACCCTTTG+AGG | - | chr3_3:85158007-85158026 | None:intergenic | 45.0% | |
| !! | GTGTCACTTCAACTTTCTCC+CGG | + | chr3_3:85158013-85158032 | Msa0479980:intron | 45.0% |
| !! | ATTTAAATAAATAAAACAAA+CGG | - | chr3_3:85152325-85152344 | None:intergenic | 5.0% |
| !! | TAATTAATAAATTTAATGAA+TGG | + | chr3_3:85154274-85154293 | Msa0479980:intron | 5.0% |
| !! | TAATTGTAAATATTAAAAAA+AGG | + | chr3_3:85155901-85155920 | Msa0479980:intron | 5.0% |
| !! | ATATAATAATAATATATCAA+TGG | + | chr3_3:85156205-85156224 | Msa0479980:intron | 5.0% |
| CTCTTCTCTTGCCGCTAGTT+AGG | + | chr3_3:85151927-85151946 | Msa0479980:five_prime_UTR | 50.0% | |
| TTTGATTCACCCAGTGCTGC+TGG | + | chr3_3:85152198-85152217 | Msa0479980:CDS | 50.0% | |
| ! | TTGATTCACCCAGTGCTGCT+GGG | + | chr3_3:85152199-85152218 | Msa0479980:CDS | 50.0% |
| CCATATAACCCAGCAGCACT+GGG | - | chr3_3:85152210-85152229 | None:intergenic | 50.0% | |
| ! | CCAGTGCTGCTGGGTTATAT+GGG | + | chr3_3:85152208-85152227 | Msa0479980:CDS | 50.0% |
| ! | CAGTGCTGCTGGGTTATATG+GGG | + | chr3_3:85152209-85152228 | Msa0479980:CDS | 50.0% |
| CTGCCTACCACCATCTATCA+TGG | + | chr3_3:85152979-85152998 | Msa0479980:intron | 50.0% | |
| CACGCTGCCACAAAACAACA+CGG | - | chr3_3:85153205-85153224 | None:intergenic | 50.0% | |
| TGCTCTGGCAATTGTCTGTG+AGG | + | chr3_3:85153406-85153425 | Msa0479980:intron | 50.0% | |
| CTGGCAATTGTCTGTGAGGA+TGG | + | chr3_3:85153410-85153429 | Msa0479980:intron | 50.0% | |
| TGTGAGGATGGAGTGGAGTA+GGG | + | chr3_3:85153422-85153441 | Msa0479980:intron | 50.0% | |
| ACAGCAAGGGAAGAAGAGTG+AGG | - | chr3_3:85153815-85153834 | None:intergenic | 50.0% | |
| ATTAGTGAGGTCAGTGGGAC+TGG | + | chr3_3:85154126-85154145 | Msa0479980:CDS | 50.0% | |
| TTAGTGAGGTCAGTGGGACT+GGG | + | chr3_3:85154127-85154146 | Msa0479980:CDS | 50.0% | |
| !!! | CCAGTTCCCTTTTGGTTCCA+AGG | - | chr3_3:85154159-85154178 | None:intergenic | 50.0% |
| CCTTGGAACCAAAAGGGAAC+TGG | + | chr3_3:85154156-85154175 | Msa0479980:CDS | 50.0% | |
| ! | TTGCTCGACCAGTTCCCTTT+TGG | - | chr3_3:85154167-85154186 | None:intergenic | 50.0% |
| AAAAGGGAACTGGTCGAGCA+AGG | + | chr3_3:85154166-85154185 | Msa0479980:CDS | 50.0% | |
| GGAGGAGGAATAAAATGGGC+TGG | - | chr3_3:85154241-85154260 | None:intergenic | 50.0% | |
| CAATAAGAAGGTTCGGCGAC+TGG | + | chr3_3:85154359-85154378 | Msa0479980:CDS | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr3_3:85154802-85154821 | None:intergenic | 50.0% |
| !! | CTCACCTTACAAGCCGGTTT+TGG | + | chr3_3:85154800-85154819 | Msa0479980:intron | 50.0% |
| GAGAAAACCTTAGGCAAGGC+CGG | + | chr3_3:85155047-85155066 | Msa0479980:intron | 50.0% | |
| TTTCCCCTTTCCTACGACGT+AGG | + | chr3_3:85155196-85155215 | Msa0479980:intron | 50.0% | |
| ACTCCTACGTCGTAGGAAAG+GGG | - | chr3_3:85155202-85155221 | None:intergenic | 50.0% | |
| CACTCCTACGTCGTAGGAAA+GGG | - | chr3_3:85155203-85155222 | None:intergenic | 50.0% | |
| TCACTCCTACGTCGTAGGAA+AGG | - | chr3_3:85155204-85155223 | None:intergenic | 50.0% | |
| GAATGTCACTCCTACGTCGT+AGG | - | chr3_3:85155209-85155228 | None:intergenic | 50.0% | |
| GGCCGTTCCTATGAAATAGG+AGG | - | chr3_3:85155391-85155410 | None:intergenic | 50.0% | |
| CAGGGCCGTTCCTATGAAAT+AGG | - | chr3_3:85155394-85155413 | None:intergenic | 50.0% | |
| CCAACTATACAAAACCGGGG+TGG | - | chr3_3:85156296-85156315 | None:intergenic | 50.0% | |
| !! | CCACCCCGGTTTTGTATAGT+TGG | + | chr3_3:85156293-85156312 | Msa0479980:intron | 50.0% |
| !! | TGGCCTAACGGTTCTAGGAT+AGG | - | chr3_3:85156355-85156374 | None:intergenic | 50.0% |
| ! | CTTGATAGCAGGTGGCCTAA+CGG | - | chr3_3:85156367-85156386 | None:intergenic | 50.0% |
| ! | TCTGAAGCGTGACCTGATTG+TGG | - | chr3_3:85156393-85156412 | None:intergenic | 50.0% |
| AAAGGACAGCTGATGCAGTG+CGG | - | chr3_3:85157203-85157222 | None:intergenic | 50.0% | |
| !!! | TTGCGATGGAGGGTTTTGGA+GGG | + | chr3_3:85157724-85157743 | Msa0479980:intron | 50.0% |
| ! | CACCCTTTGAGGAGAAGATG+AGG | - | chr3_3:85157996-85158015 | None:intergenic | 50.0% |
| TTGAACAGTGAAGCGGCGAT+AGG | - | chr3_3:85158108-85158127 | None:intergenic | 50.0% | |
| CAAGAGCTCCGAGAACCAAC+AGG | - | chr3_3:85151874-85151893 | None:intergenic | 55.0% | |
| ! | CCCAGTGCTGCTGGGTTATA+TGG | + | chr3_3:85152207-85152226 | Msa0479980:CDS | 55.0% |
| CCCATATAACCCAGCAGCAC+TGG | - | chr3_3:85152211-85152230 | None:intergenic | 55.0% | |
| TCACGCTCAGATGTTGCGAG+AGG | - | chr3_3:85152427-85152446 | None:intergenic | 55.0% | |
| TTATGCTGCAGGGCTCTGTC+AGG | + | chr3_3:85153079-85153098 | Msa0479980:intron | 55.0% | |
| CTGTGAGGATGGAGTGGAGT+AGG | + | chr3_3:85153421-85153440 | Msa0479980:intron | 55.0% | |
| GTGAGGATGGAGTGGAGTAG+GGG | + | chr3_3:85153423-85153442 | Msa0479980:intron | 55.0% | |
| TGAGGATGGAGTGGAGTAGG+GGG | + | chr3_3:85153424-85153443 | Msa0479980:intron | 55.0% | |
| ATGGAGTGGAGTAGGGGGTT+GGG | + | chr3_3:85153429-85153448 | Msa0479980:intron | 55.0% | |
| !! | GTGTAGAGAGGCATCGGGTA+GGG | - | chr3_3:85153724-85153743 | None:intergenic | 55.0% |
| !! | TGTGTAGAGAGGCATCGGGT+AGG | - | chr3_3:85153725-85153744 | None:intergenic | 55.0% |
| GAACTGGTCGAGCAAGGCAT+GGG | + | chr3_3:85154172-85154191 | Msa0479980:CDS | 55.0% | |
| CAAGGCATGGGTCATTGCGT+GGG | + | chr3_3:85154184-85154203 | Msa0479980:CDS | 55.0% | |
| TTCCTCCTCCCATTCAGTGG+TGG | + | chr3_3:85154251-85154270 | Msa0479980:intron | 55.0% | |
| TACCACCACTGAATGGGAGG+AGG | - | chr3_3:85154256-85154275 | None:intergenic | 55.0% | |
| GAATGGCAACAGTTCAGGGG+TGG | + | chr3_3:85154291-85154310 | Msa0479980:intron | 55.0% | |
| AAAGCGTGACTTCGGGGCTT+AGG | - | chr3_3:85154333-85154352 | None:intergenic | 55.0% | |
| AGCTCGTGCAGCAGAAGGAA+AGG | + | chr3_3:85154401-85154420 | Msa0479980:CDS | 55.0% | |
| !! | CCACCCAAAACCGGCTTGTA+AGG | - | chr3_3:85154807-85154826 | None:intergenic | 55.0% |
| !!! | CCTTACAAGCCGGTTTTGGG+TGG | + | chr3_3:85154804-85154823 | Msa0479980:intron | 55.0% |
| TTCTTGCACTCCCCAAGGTC+CGG | - | chr3_3:85155069-85155088 | None:intergenic | 55.0% | |
| ATAGGAACGGCCCTGACCTT+AGG | + | chr3_3:85155399-85155418 | Msa0479980:intron | 55.0% | |
| ! | CATTGAAGAGTGGAGGCGTG+TGG | - | chr3_3:85155434-85155453 | None:intergenic | 55.0% |
| CACACGCCTCCACTCTTCAA+TGG | + | chr3_3:85155432-85155451 | Msa0479980:intron | 55.0% | |
| AGGACGTGGTACTGTTCTGG+TGG | + | chr3_3:85155921-85155940 | Msa0479980:intron | 55.0% | |
| GTGCATGGTAAATGCCACCC+CGG | + | chr3_3:85156279-85156298 | Msa0479980:intron | 55.0% | |
| AAGGACAGCTGATGCAGTGC+GGG | - | chr3_3:85157202-85157221 | None:intergenic | 55.0% | |
| CTGCATCAGCTGTCCTTTGC+CGG | + | chr3_3:85157205-85157224 | Msa0479980:intron | 55.0% | |
| !! | GTTGCGATGGAGGGTTTTGG+AGG | + | chr3_3:85157723-85157742 | Msa0479980:intron | 55.0% |
| !!! | TGCGATGGAGGGTTTTGGAG+GGG | + | chr3_3:85157725-85157744 | Msa0479980:intron | 55.0% |
| !!! | ATGGAGGGTTTTGGAGGGGA+GGG | + | chr3_3:85157729-85157748 | Msa0479980:intron | 55.0% |
| ! | GGAGGCTCTAGTGGGAAAAG+TGG | - | chr3_3:85157933-85157952 | None:intergenic | 55.0% |
| ATCAAAGCAGCGCCGTGCCA+AGG | - | chr3_3:85152184-85152203 | None:intergenic | 60.0% | |
| GCAGCGTGCAAAACGCCAAC+AGG | + | chr3_3:85153217-85153236 | Msa0479980:CDS | 60.0% | |
| GATGGAGTGGAGTAGGGGGT+TGG | + | chr3_3:85153428-85153447 | Msa0479980:intron | 60.0% | |
| !! | AGAGAGGCATCGGGTAGGGT+TGG | - | chr3_3:85153720-85153739 | None:intergenic | 60.0% |
| CAGAGGGCGGAAAAGACGCA+AGG | - | chr3_3:85153758-85153777 | None:intergenic | 60.0% | |
| GTGGGACTGGGAGAAAGCCT+TGG | + | chr3_3:85154139-85154158 | Msa0479980:CDS | 60.0% | |
| GGAACTGGTCGAGCAAGGCA+TGG | + | chr3_3:85154171-85154190 | Msa0479980:CDS | 60.0% | |
| GCAAGGCATGGGTCATTGCG+TGG | + | chr3_3:85154183-85154202 | Msa0479980:CDS | 60.0% | |
| AGGGGTGGTGAAGCGAAGCA+TGG | + | chr3_3:85154306-85154325 | Msa0479980:CDS | 60.0% | |
| CTGTCAGCTCGTGCAGCAGA+AGG | + | chr3_3:85154396-85154415 | Msa0479980:CDS | 60.0% | |
| GTGTCTCTTGCCAGCTTGGC+TGG | - | chr3_3:85154618-85154637 | None:intergenic | 60.0% | |
| CTTAGGCAAGGCCGGACCTT+GGG | + | chr3_3:85155055-85155074 | Msa0479980:intron | 60.0% | |
| TTAGGCAAGGCCGGACCTTG+GGG | + | chr3_3:85155056-85155075 | Msa0479980:intron | 60.0% | |
| AGCGCTTCTTGCACTCCCCA+AGG | - | chr3_3:85155074-85155093 | None:intergenic | 60.0% | |
| GCAGGTGGCCTAACGGTTCT+AGG | - | chr3_3:85156360-85156379 | None:intergenic | 60.0% | |
| !!! | GATGGAGGGTTTTGGAGGGG+AGG | + | chr3_3:85157728-85157747 | Msa0479980:intron | 60.0% |
| GGGCGGAAAAGACGCAAGGC+AGG | - | chr3_3:85153754-85153773 | None:intergenic | 65.0% | |
| TGGGTCATTGCGTGGGCCTC+AGG | + | chr3_3:85154191-85154210 | Msa0479980:CDS | 65.0% | |
| CCAAGGTCCGGCCTTGCCTA+AGG | - | chr3_3:85155057-85155076 | None:intergenic | 65.0% | |
| CCTTAGGCAAGGCCGGACCT+TGG | + | chr3_3:85155054-85155073 | Msa0479980:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 85151827 | 85158712 | 85151827 | ID=Msa0479980;Name=Msa0479980 |
| chr3_3 | mRNA | 85151827 | 85158712 | 85151827 | ID=Msa0479980-mRNA-1;Parent=Msa0479980;Name=Msa0479980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=137|1|1|1|0.85|0.75|8|235|297 |
| chr3_3 | exon | 85151827 | 85151948 | 85151827 | ID=Msa0479980-mRNA-1:exon:24307;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85152123 | 85152260 | 85152123 | ID=Msa0479980-mRNA-1:exon:24308;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85152349 | 85152451 | 85152349 | ID=Msa0479980-mRNA-1:exon:24309;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85153090 | 85153238 | 85153090 | ID=Msa0479980-mRNA-1:exon:24310;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85154105 | 85154212 | 85154105 | ID=Msa0479980-mRNA-1:exon:24311;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85154303 | 85154422 | 85154303 | ID=Msa0479980-mRNA-1:exon:24312;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85157460 | 85157633 | 85157460 | ID=Msa0479980-mRNA-1:exon:24313;Parent=Msa0479980-mRNA-1 |
| chr3_3 | exon | 85158361 | 85158712 | 85158361 | ID=Msa0479980-mRNA-1:exon:24314;Parent=Msa0479980-mRNA-1 |
| chr3_3 | five_prime_UTR | 85151827 | 85151948 | 85151827 | ID=Msa0479980-mRNA-1:five_prime_utr;Parent=Msa0479980-mRNA-1 |
| chr3_3 | five_prime_UTR | 85152123 | 85152137 | 85152123 | ID=Msa0479980-mRNA-1:five_prime_utr;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85152138 | 85152260 | 85152138 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85152349 | 85152451 | 85152349 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85153090 | 85153238 | 85153090 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85154105 | 85154212 | 85154105 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85154303 | 85154422 | 85154303 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85157460 | 85157633 | 85157460 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | CDS | 85158361 | 85158477 | 85158361 | ID=Msa0479980-mRNA-1:cds;Parent=Msa0479980-mRNA-1 |
| chr3_3 | three_prime_UTR | 85158478 | 85158712 | 85158478 | ID=Msa0479980-mRNA-1:three_prime_utr;Parent=Msa0479980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
