AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0428420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428420 MtrunA17_Chr3g0131771 97.879 330 6 1 1 329 1 330 0.0 671
Msa0428420 MtrunA17_Chr8g0385911 58.017 343 112 12 1 328 1 326 1.13e-107 317
Msa0428420 MtrunA17_Chr7g0234761 57.516 153 45 3 85 217 236 388 1.82e-42 154
Msa0428420 MtrunA17_Chr3g0144641 63.200 125 30 1 110 218 139 263 1.95e-42 151
Msa0428420 MtrunA17_Chr8g0365941 69.091 110 31 1 112 218 268 377 3.50e-42 152
Msa0428420 MtrunA17_Chr8g0339091 62.500 136 40 4 108 235 245 377 4.18e-42 152
Msa0428420 MtrunA17_Chr1g0152131 61.667 120 37 2 120 233 228 344 5.66e-42 150
Msa0428420 MtrunA17_Chr5g0415291 60.976 123 46 2 96 217 62 183 9.01e-42 145
Msa0428420 MtrunA17_Chr5g0421111 56.738 141 49 2 90 218 297 437 7.60e-41 150
Msa0428420 MtrunA17_Chr4g0035101 70.642 109 28 3 112 218 109 215 5.82e-40 143
Msa0428420 MtrunA17_Chr8g0363921 86.667 75 10 0 143 217 148 222 1.86e-39 140
Msa0428420 MtrunA17_Chr1g0174161 55.652 115 42 2 143 251 157 268 6.14e-36 132
Msa0428420 MtrunA17_Chr7g0258161 68.889 90 25 1 143 232 170 256 4.32e-35 130
Msa0428420 MtrunA17_Chr6g0484271 56.452 124 34 4 111 230 134 241 8.46e-35 128
Msa0428420 MtrunA17_Chr4g0074161 41.722 151 71 4 146 292 206 343 2.43e-23 99.8
Msa0428420 MtrunA17_Chr1g0190731 47.619 105 54 1 135 239 182 285 1.05e-21 94.4
Msa0428420 MtrunA17_Chr4g0014771 60.000 65 26 0 146 210 118 182 6.73e-18 80.5
Msa0428420 MtrunA17_Chr4g0032951 61.538 65 25 0 146 210 355 419 4.94e-17 81.6
Msa0428420 MtrunA17_Chr1g0174271 50.633 79 39 0 146 224 298 376 5.26e-16 78.2
Msa0428420 MtrunA17_Chr1g0182791 40.952 105 60 2 117 220 287 390 7.74e-16 78.2
Msa0428420 MtrunA17_Chr1g0184841 40.909 132 72 2 109 235 78 208 1.27e-15 75.9
Msa0428420 MtrunA17_Chr7g0258181 49.367 79 40 0 134 212 231 309 3.38e-15 75.1
Msa0428420 MtrunA17_Chr2g0329041 55.385 65 29 0 144 208 330 394 3.83e-15 75.9
Msa0428420 MtrunA17_Chr1g0193321 37.273 110 64 3 106 211 418 526 1.01e-14 75.1
Msa0428420 MtrunA17_Chr3g0087771 53.846 65 30 0 146 210 322 386 3.17e-14 72.8
Msa0428420 MtrunA17_Chr8g0351881 49.231 65 33 0 146 210 316 380 1.48e-12 67.8
Msa0428420 MtrunA17_Chr5g0402031 37.391 115 67 3 111 221 67 180 1.50e-12 67.8
Msa0428420 MtrunA17_Chr3g0095391 47.945 73 36 2 148 220 311 381 2.83e-12 67.4
Msa0428420 MtrunA17_Chr1g0153241 39.130 92 54 2 148 238 87 177 6.51e-12 65.1
Msa0428420 MtrunA17_Chr1g0152651 53.125 64 29 1 147 210 275 337 6.56e-12 65.9
Msa0428420 MtrunA17_Chr1g0213791 50.000 64 32 0 146 209 265 328 1.37e-11 64.7
Msa0428420 MtrunA17_Chr3g0134741 48.052 77 38 2 147 222 230 305 3.79e-11 63.2
Msa0428420 MtrunA17_Chr7g0262691 44.872 78 36 2 149 220 255 331 4.34e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0428420 AT5G50915.1 47.148 263 98 10 73 328 57 285 3.51e-62 199
Msa0428420 AT5G50915.2 47.148 263 98 10 73 328 57 285 3.51e-62 199
Msa0428420 AT5G50915.3 50.228 219 82 6 73 285 57 254 9.10e-59 190
Msa0428420 AT5G50915.4 50.228 219 82 6 73 285 57 254 9.10e-59 190
Msa0428420 AT1G68920.1 57.718 149 59 2 85 233 243 387 3.92e-46 163
Msa0428420 AT1G68920.4 57.718 149 59 2 85 233 243 387 3.92e-46 163
Msa0428420 AT1G68920.2 57.718 149 59 2 85 233 243 387 3.92e-46 163
Msa0428420 AT1G68920.3 56.209 153 54 2 91 233 237 386 3.98e-46 163
Msa0428420 AT1G10120.2 60.976 123 45 1 111 233 171 290 3.43e-44 155
Msa0428420 AT1G10120.1 60.976 123 45 1 111 233 171 290 3.43e-44 155
Msa0428420 AT1G59640.1 68.966 116 31 2 107 217 92 207 3.87e-44 152
Msa0428420 AT3G07340.2 65.079 126 43 1 92 217 205 329 5.98e-44 156
Msa0428420 AT3G07340.1 65.079 126 43 1 92 217 205 329 1.19e-43 156
Msa0428420 AT1G26260.3 52.353 170 49 4 93 233 90 256 1.29e-43 153
Msa0428420 AT1G26260.5 52.353 170 49 4 93 233 119 285 1.46e-43 154
Msa0428420 AT1G26260.4 52.353 170 49 4 93 233 141 307 2.54e-43 154
Msa0428420 AT1G26260.1 52.353 170 49 4 93 233 141 307 2.54e-43 154
Msa0428420 AT1G26260.6 52.353 170 49 4 93 233 141 307 2.54e-43 154
Msa0428420 AT1G26260.2 52.353 170 49 4 93 233 141 307 2.54e-43 154
Msa0428420 AT1G59640.2 68.966 116 31 2 107 217 92 207 5.88e-43 151
Msa0428420 AT5G48560.2 83.146 89 15 0 138 226 293 381 6.06e-43 154
Msa0428420 AT5G48560.1 83.146 89 15 0 138 226 293 381 9.08e-43 154
Msa0428420 AT3G23690.1 60.000 135 41 4 111 233 146 279 1.05e-41 149
Msa0428420 AT4G34530.1 87.179 78 10 0 141 218 167 244 8.61e-41 145
Msa0428420 AT5G62610.2 71.910 89 25 0 129 217 136 224 1.75e-38 138
Msa0428420 AT5G62610.1 71.910 89 25 0 129 217 136 224 1.75e-38 138
Msa0428420 AT4G36540.2 57.143 133 46 3 110 234 97 226 8.70e-38 137
Msa0428420 AT4G36540.1 57.143 133 46 3 110 234 97 226 9.11e-38 137
Msa0428420 AT2G18300.1 49.057 159 70 4 84 242 131 278 1.58e-37 137
Msa0428420 AT2G18300.2 55.556 135 52 3 84 218 131 257 3.11e-37 136
Msa0428420 AT2G18300.3 55.556 135 52 3 84 218 131 257 7.19e-37 136
Msa0428420 AT2G42300.4 64.583 96 31 1 143 238 182 274 1.78e-36 132
Msa0428420 AT1G18400.2 71.264 87 24 1 144 230 143 228 2.65e-36 131
Msa0428420 AT3G57800.2 71.111 90 23 1 143 232 201 287 2.96e-36 134
Msa0428420 AT1G18400.1 71.264 87 24 1 144 230 143 228 4.33e-36 131
Msa0428420 AT1G73830.2 68.478 92 28 1 145 236 146 236 1.35e-35 130
Msa0428420 AT2G42300.1 66.304 92 28 1 143 234 182 270 2.96e-35 130
Msa0428420 AT1G73830.1 70.930 86 24 1 145 230 146 230 3.21e-35 129
Msa0428420 AT1G25330.1 52.518 139 54 4 98 230 51 183 3.13e-33 122
Msa0428420 AT3G57800.1 46.763 139 24 2 143 234 201 336 1.57e-27 112
Msa0428420 AT2G24260.2 65.753 73 24 1 139 211 28 99 1.67e-23 97.4
Msa0428420 AT2G24260.1 65.753 73 24 1 139 211 131 202 1.41e-22 97.1
Msa0428420 AT5G58010.1 52.427 103 38 3 145 243 98 193 2.89e-22 95.1
Msa0428420 AT4G30980.1 71.212 66 18 1 146 211 130 194 5.10e-22 94.7
Msa0428420 AT4G30980.2 71.212 66 18 1 146 211 178 242 7.22e-22 95.1
Msa0428420 AT2G42300.5 83.721 43 7 0 143 185 182 224 1.10e-18 84.0
Msa0428420 AT2G42300.3 83.721 43 7 0 143 185 182 224 1.10e-18 84.0
Msa0428420 AT2G42300.2 83.721 43 7 0 143 185 182 224 1.25e-18 84.0
Msa0428420 AT4G09180.1 53.731 67 31 0 144 210 182 248 3.69e-15 74.7
Msa0428420 AT1G35460.1 53.846 65 30 0 146 210 181 245 3.72e-15 74.7
Msa0428420 AT2G42280.1 54.688 64 29 0 146 209 279 342 5.67e-15 75.5
Msa0428420 AT1G51140.1 57.812 64 27 0 146 209 304 367 8.33e-15 75.1
Msa0428420 AT2G42280.3 56.061 66 27 1 146 209 279 344 1.08e-14 74.3
Msa0428420 AT4G28790.1 35.200 125 73 2 97 221 229 345 1.97e-14 73.9
Msa0428420 AT1G09530.3 43.820 89 46 2 123 211 317 401 3.03e-14 73.9
Msa0428420 AT1G09530.2 43.820 89 46 2 123 211 317 401 3.03e-14 73.9
Msa0428420 AT1G09530.5 43.820 89 46 2 123 211 317 401 3.03e-14 73.9
Msa0428420 AT1G09530.1 43.820 89 46 2 123 211 317 401 3.03e-14 73.9
Msa0428420 AT1G09530.4 43.820 89 46 2 123 211 317 401 3.03e-14 73.9
Msa0428420 AT1G09530.6 43.820 89 46 2 123 211 317 401 3.03e-14 73.9
Msa0428420 AT4G02590.3 40.310 129 63 4 108 223 36 163 5.06e-14 71.2
Msa0428420 AT4G02590.2 40.310 129 63 4 108 223 99 226 5.29e-14 72.0
Msa0428420 AT4G02590.1 40.310 129 63 4 108 223 99 226 5.29e-14 72.0
Msa0428420 AT4G28800.1 48.611 72 36 1 149 220 252 322 6.46e-14 72.8
Msa0428420 AT2G20180.7 52.381 63 29 1 149 211 210 271 7.79e-14 72.4
Msa0428420 AT2G20180.1 52.381 63 29 1 149 211 210 271 7.79e-14 72.4
Msa0428420 AT2G20180.5 52.381 63 29 1 149 211 210 271 7.79e-14 72.4
Msa0428420 AT2G20180.4 52.381 63 29 1 149 211 281 342 9.25e-14 72.4
Msa0428420 AT2G20180.6 52.381 63 29 1 149 211 281 342 9.25e-14 72.4
Msa0428420 AT2G20180.2 52.381 63 29 1 149 211 281 342 9.25e-14 72.4
Msa0428420 AT2G20180.3 52.381 63 29 1 149 211 281 342 9.25e-14 72.4
Msa0428420 AT4G28815.2 50.000 70 33 2 149 217 71 139 1.07e-13 70.1
Msa0428420 AT1G03040.2 53.659 82 33 2 146 223 139 219 3.71e-13 69.3
Msa0428420 AT4G28815.1 50.000 70 33 2 149 217 147 215 3.82e-13 69.3
Msa0428420 AT1G03040.1 53.659 82 33 2 146 223 144 224 4.18e-13 69.3
Msa0428420 AT1G03040.3 53.659 82 33 2 146 223 144 224 7.09e-13 68.9
Msa0428420 AT2G43140.1 53.125 64 30 0 146 209 134 197 8.24e-13 67.0
Msa0428420 AT2G43140.2 53.125 64 30 0 146 209 231 294 8.72e-13 68.6
Msa0428420 AT4G28800.2 52.459 61 28 1 149 209 264 323 1.93e-12 68.2
Msa0428420 AT2G20180.8 51.667 60 28 1 149 208 281 339 2.50e-12 67.4
Msa0428420 AT1G27740.1 34.532 139 77 3 85 222 118 243 3.42e-12 66.2
Msa0428420 AT4G00050.2 49.275 69 34 1 142 210 101 168 1.40e-11 64.7
Msa0428420 AT4G00050.1 49.275 69 34 1 142 210 203 270 2.62e-11 64.7
Msa0428420 AT1G05805.1 48.438 64 33 0 146 209 283 346 2.76e-11 64.3
Msa0428420 AT4G00050.3 49.275 69 34 1 142 210 203 270 3.04e-11 64.3
Msa0428420 AT2G14760.1 45.349 86 42 3 146 227 237 321 5.29e-11 63.2
Msa0428420 AT4G28790.2 45.455 66 35 1 148 213 273 337 6.22e-11 63.2

Find 95 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATAGGAGTAGCTTCTTTC+TGG 0.119843 3_2:-79290895 None:intergenic
GTGAGGGTTAGTATTGTTTC+TGG 0.191984 3_2:-79289111 None:intergenic
AAAAGATATGGTCTTATATT+TGG 0.232847 3_2:-79291002 None:intergenic
AATCAATATGAGTACATTAA+AGG 0.261803 3_2:+79290934 Msa0428420:three_prime_UTR
GATCTTGTTAATGTTATTGT+AGG 0.288213 3_2:-79291557 None:intergenic
TCCACAGTCTTCCATGGTTC+TGG 0.296713 3_2:+79289022 Msa0428420:CDS
GCAAAAGTTGTGCCTTGTTT+AGG 0.309108 3_2:-79290375 None:intergenic
CTCAGTTATGGTAGTAACTT+TGG 0.320242 3_2:-79288967 None:intergenic
TGAATGAATCTACTGAGTTT+TGG 0.336323 3_2:+79291453 Msa0428420:three_prime_UTR
ATGTGTTTGAAAATGCAATT+AGG 0.344019 3_2:-79288801 None:intergenic
AAAGTTGGTGTGTGACAAAA+AGG 0.346586 3_2:-79288730 None:intergenic
AGCTACTAATGACTACCTTT+TGG 0.348899 3_2:+79290434 Msa0428420:CDS
TATTTATGGTTTCAGCTGTA+TGG 0.367453 3_2:+79291529 Msa0428420:three_prime_UTR
AAAAGATCAGAGAAAGTGTT+TGG 0.372452 3_2:+79289514 Msa0428420:CDS
GGACGTGGATATAGCCAGTT+GGG 0.373564 3_2:-79289544 None:intergenic
CTACAAGGCCATGCATTTGT+TGG 0.376272 3_2:+79291404 Msa0428420:three_prime_UTR
TTTGGCATCATTATACTGTA+TGG 0.378797 3_2:+79291471 Msa0428420:three_prime_UTR
ATCAATATGAGTACATTAAA+GGG 0.387629 3_2:+79290935 Msa0428420:three_prime_UTR
TCCCTTTGTAACCAGGTAAC+TGG 0.390578 3_2:+79289955 Msa0428420:intron
AACAGACCTAGACACTCTTT+TGG 0.397586 3_2:+79290185 Msa0428420:CDS
GTTCTGGACAAGCTTGAAAA+TGG 0.416319 3_2:+79289038 Msa0428420:CDS
CAACGGATCTAGAAAAGATA+TGG 0.418235 3_2:-79291014 None:intergenic
AGAAGGTTCATTCTCAGTTA+TGG 0.434337 3_2:-79288979 None:intergenic
TTATCAGAAATTAAATAACT+TGG 0.449559 3_2:+79290311 Msa0428420:intron
TGAAACTGTGAAGGTGGAGG+AGG 0.452082 3_2:-79288900 None:intergenic
TGGCCTGACCCCTTCTTGCT+CGG 0.454614 3_2:-79289565 None:intergenic
TAGCCACAGCCTTGCTGAAA+GGG 0.456249 3_2:+79289592 Msa0428420:CDS
GACCCCTTCTTGCTCGGACG+TGG 0.465774 3_2:-79289559 None:intergenic
CGTCCGAGCAAGAAGGGGTC+AGG 0.472206 3_2:+79289562 Msa0428420:CDS
ATAGTAATGAAGCGCTCAAA+AGG 0.477883 3_2:-79288753 None:intergenic
ATTTCAATGTCTACTTAGCT+AGG 0.480096 3_2:-79291096 None:intergenic
GAAGATGTTGGTTGGAGTCA+TGG 0.483883 3_2:-79290409 None:intergenic
AAAGGTAGTCATTAGTAGCT+TGG 0.489051 3_2:-79290431 None:intergenic
CAAAAGTTTCTTCATTCACA+TGG 0.489577 3_2:+79290640 Msa0428420:CDS
GAAGAGAGAAAATAAGTGAA+AGG 0.496748 3_2:+79289755 Msa0428420:CDS
CCAGAAAGAAGCTACTCCTA+TGG 0.497309 3_2:+79290895 Msa0428420:three_prime_UTR
ATTAGTAGCTTGGAAGATGT+TGG 0.500421 3_2:-79290421 None:intergenic
AGTGGAACCCATTGGCTACA+AGG 0.504045 3_2:+79291389 Msa0428420:intron
GACACAGATGATAATGTTGA+TGG 0.508396 3_2:-79290339 None:intergenic
TGTGGTGGCAGTTATTCTGT+TGG 0.516906 3_2:+79291157 Msa0428420:three_prime_UTR
GCTTGAAAATGGTGATGAGC+AGG 0.517364 3_2:+79289049 Msa0428420:CDS
AATATTATTACATGAGAGTG+AGG 0.517794 3_2:-79289128 None:intergenic
GGCCATGCATTTGTTGGTCT+AGG 0.518577 3_2:+79291410 Msa0428420:three_prime_UTR
TGACAGGATAATGCAGCAGA+AGG 0.520312 3_2:+79289437 Msa0428420:intron
AAGTTGCAGCAACTTGTGCC+AGG 0.526665 3_2:+79289784 Msa0428420:CDS
GGGTGAAACTGTGAAGGTGG+AGG 0.526667 3_2:-79288903 None:intergenic
GTAGCTTGGAAGATGTTGGT+TGG 0.528925 3_2:-79290417 None:intergenic
ATAGCCACAGCCTTGCTGAA+AGG 0.530497 3_2:+79289591 Msa0428420:CDS
ACTTGTGCCAGGCTGTGATA+AGG 0.531492 3_2:+79289795 Msa0428420:CDS
CCATGGAAGACTGTGGACTA+AGG 0.533292 3_2:-79289016 None:intergenic
CCTTAGTCCACAGTCTTCCA+TGG 0.535388 3_2:+79289016 Msa0428420:CDS
GAAGCGCTCAAAAGGAAAGT+TGG 0.535635 3_2:-79288745 None:intergenic
TTAATAATATCTTGATGAAG+AGG 0.545994 3_2:-79288924 None:intergenic
TCATATACATAAATCTAGCT+AGG 0.546802 3_2:-79291433 None:intergenic
AATACCAAGTGTTAATCCAT+AGG 0.549267 3_2:-79290911 None:intergenic
AGCAAGGCTGTGGCTATCAG+TGG 0.554257 3_2:-79289585 None:intergenic
AGGTTGTTCTTAAGAAAGAG+TGG 0.556213 3_2:-79288781 None:intergenic
TATCCACGTCCGAGCAAGAA+GGG 0.556525 3_2:+79289556 Msa0428420:CDS
TTGAAGCTGAAGTATCCAAA+AGG 0.556829 3_2:-79290449 None:intergenic
GTTCTCCTCTTCTTCTCCGT+AGG 0.559768 3_2:-79289089 None:intergenic
CGGACGTGGATATAGCCAGT+TGG 0.559837 3_2:-79289545 None:intergenic
ATAGTCCTACGGAGAAGAAG+AGG 0.562653 3_2:+79289084 Msa0428420:CDS
AATGATGAGTCAACAAGGAA+AGG 0.563177 3_2:-79288852 None:intergenic
ATGAGTCAACAAGGAAAGGA+TGG 0.563812 3_2:-79288848 None:intergenic
TACTCCTATGGATTAACACT+TGG 0.565564 3_2:+79290907 Msa0428420:three_prime_UTR
ATACCCTTTCAGCAAGGCTG+TGG 0.567250 3_2:-79289595 None:intergenic
TTAAAGGGTATCAAAATGAA+AGG 0.570876 3_2:+79290950 Msa0428420:three_prime_UTR
TAGGATCAATACTAGTCTCT+CGG 0.571968 3_2:-79291077 None:intergenic
TTGAGAGCTTACAAACATGT+TGG 0.572623 3_2:-79290730 None:intergenic
TGACCTACCTTATCACAGCC+TGG 0.577941 3_2:-79289802 None:intergenic
TATCATTATTGATAAATGAG+AGG 0.580449 3_2:+79291197 Msa0428420:three_prime_UTR
GTCTAACCAAAAGAGTGTCT+AGG 0.588703 3_2:-79290191 None:intergenic
TTCAAGCTTGTCCAGAACCA+TGG 0.592122 3_2:-79289033 None:intergenic
GTTGCCATGTCATAGAACAT+AGG 0.595363 3_2:-79290165 None:intergenic
ATATCCACGTCCGAGCAAGA+AGG 0.602822 3_2:+79289555 Msa0428420:CDS
AGAGGGTGAAACTGTGAAGG+TGG 0.604355 3_2:-79288906 None:intergenic
GTCTTTACAGAATCAAGTAG+AGG 0.604540 3_2:+79290017 Msa0428420:CDS
GTCATCAAATGTTGTCTCTG+AGG 0.606377 3_2:+79290491 Msa0428420:CDS
GGCCTAGACCAACAAATGCA+TGG 0.608179 3_2:-79291412 None:intergenic
TTGTAACCAGGTAACTGGAA+AGG 0.610256 3_2:+79289960 Msa0428420:intron
ATATTATTACATGAGAGTGA+GGG 0.611838 3_2:-79289127 None:intergenic
TAATAATATCTTGATGAAGA+GGG 0.621927 3_2:-79288923 None:intergenic
GACGTGGATATAGCCAGTTG+GGG 0.624086 3_2:-79289543 None:intergenic
GACAGGATAATGCAGCAGAA+GGG 0.624145 3_2:+79289438 Msa0428420:intron
ATCCACGTCCGAGCAAGAAG+GGG 0.635705 3_2:+79289557 Msa0428420:CDS
TCCAGAACCATGGAAGACTG+TGG 0.648687 3_2:-79289023 None:intergenic
GCATGAATGATGAGTCAACA+AGG 0.650211 3_2:-79288857 None:intergenic
AAATAACTGAAACGGAACAA+CGG 0.653139 3_2:-79291031 None:intergenic
CATTGCAATAGTCCTAAACA+AGG 0.657273 3_2:+79290363 Msa0428420:CDS
TGTACTATACCCTTTCAGCA+AGG 0.661128 3_2:-79289601 None:intergenic
GTAGTGATTGATTCTTGTGG+TGG 0.663454 3_2:+79291142 Msa0428420:three_prime_UTR
TGAAGAGGGTGAAACTGTGA+AGG 0.663457 3_2:-79288909 None:intergenic
GAATCCTATGTTCTATGACA+TGG 0.666100 3_2:+79290161 Msa0428420:CDS
GAAGTAGTGATTGATTCTTG+TGG 0.683457 3_2:+79291139 Msa0428420:three_prime_UTR
ACGTGGATATAGCCAGTTGG+GGG 0.714907 3_2:-79289542 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTTACTTAATAATACT+TGG + chr3_2:79290777-79290796 Msa0428420:intron 10.0%
!! TTATCAGAAATTAAATAACT+TGG + chr3_2:79290311-79290330 Msa0428420:intron 15.0%
!!! TTAGGATTAAATCATTTTTT+TGG - chr3_2:79290534-79290553 None:intergenic 15.0%
!! AAAATGATTTAATCCTAAAA+TGG + chr3_2:79290536-79290555 Msa0428420:intron 15.0%
!!! GTGAATTTTAAATTAATGAA+AGG - chr3_2:79290686-79290705 None:intergenic 15.0%
!! AATTATATAATATAAGAGAC+AGG - chr3_2:79290758-79290777 None:intergenic 15.0%
!!! CTTATAATTTTTTTTTCTTC+AGG + chr3_2:79290815-79290834 Msa0428420:intron 15.0%
!!! ATTTTTAGCTTTTTTACATT+AGG + chr3_2:79290838-79290857 Msa0428420:three_prime_UTR 15.0%
!!! AAATGTTTTGTTAAATGAAA+TGG + chr3_2:79291588-79291607 Msa0428420:three_prime_UTR 15.0%
!! TAATAATATCTTGATGAAGA+GGG - chr3_2:79288926-79288945 None:intergenic 20.0%
!! TTAATAATATCTTGATGAAG+AGG - chr3_2:79288927-79288946 None:intergenic 20.0%
!!! AAACTTGTGGATAATTTTTT+TGG + chr3_2:79289290-79289309 Msa0428420:intron 20.0%
!!! TTAGCACTTTTTTTATACTA+TGG + chr3_2:79289323-79289342 Msa0428420:intron 20.0%
!! TGTTAGTAATTAAATATGAC+AGG + chr3_2:79289421-79289440 Msa0428420:intron 20.0%
!! TGTTGCAAATTGAATTAAAT+TGG + chr3_2:79289713-79289732 Msa0428420:intron 20.0%
!! AAATTGGATGAATTATATTC+AGG + chr3_2:79289729-79289748 Msa0428420:intron 20.0%
!!! AGAATAATTACATCCATTTT+AGG - chr3_2:79290552-79290571 None:intergenic 20.0%
!!! TGACAAAAAATAACATTTTC+AGG + chr3_2:79290582-79290601 Msa0428420:intron 20.0%
!!! AAAAAATAACATTTTCAGGA+TGG + chr3_2:79290586-79290605 Msa0428420:intron 20.0%
!! AATCAATATGAGTACATTAA+AGG + chr3_2:79290934-79290953 Msa0428420:three_prime_UTR 20.0%
!! ATCAATATGAGTACATTAAA+GGG + chr3_2:79290935-79290954 Msa0428420:three_prime_UTR 20.0%
!!! AAAAGATATGGTCTTATATT+TGG - chr3_2:79291005-79291024 None:intergenic 20.0%
!! TATCATTATTGATAAATGAG+AGG + chr3_2:79291197-79291216 Msa0428420:three_prime_UTR 20.0%
! ATGTGTTTGAAAATGCAATT+AGG - chr3_2:79288804-79288823 None:intergenic 25.0%
! ATATTATTACATGAGAGTGA+GGG - chr3_2:79289130-79289149 None:intergenic 25.0%
! AATATTATTACATGAGAGTG+AGG - chr3_2:79289131-79289150 None:intergenic 25.0%
!! CCACAAGTTTTCTTAAAATA+AGG - chr3_2:79289280-79289299 None:intergenic 25.0%
!!! CCTTATTTTAAGAAAACTTG+TGG + chr3_2:79289277-79289296 Msa0428420:intron 25.0%
! TTCAGTACAAAATTCATAAC+AGG - chr3_2:79289399-79289418 None:intergenic 25.0%
!! ACTAGTATTTTCATTTCATG+TGG + chr3_2:79289626-79289645 Msa0428420:intron 25.0%
!! CTAGTATTTTCATTTCATGT+GGG + chr3_2:79289627-79289646 Msa0428420:intron 25.0%
!! TAGTATTTTCATTTCATGTG+GGG + chr3_2:79289628-79289647 Msa0428420:intron 25.0%
!! ATAACTAAAAGGGACATTTT+TGG - chr3_2:79289674-79289693 None:intergenic 25.0%
! AGACATGAAGATAACTAAAA+GGG - chr3_2:79289684-79289703 None:intergenic 25.0%
!!! TTTGAGACTTTTAATTGCAT+GGG - chr3_2:79289857-79289876 None:intergenic 25.0%
!!! TTTTGAGACTTTTAATTGCA+TGG - chr3_2:79289858-79289877 None:intergenic 25.0%
!!! TAGCTTTTTTACATTAGGTA+AGG + chr3_2:79290843-79290862 Msa0428420:three_prime_UTR 25.0%
!!! TTAAAGGGTATCAAAATGAA+AGG + chr3_2:79290950-79290969 Msa0428420:three_prime_UTR 25.0%
! AGAGTCAAAAATAACTGAAA+CGG - chr3_2:79291042-79291061 None:intergenic 25.0%
! TCATATACATAAATCTAGCT+AGG - chr3_2:79291436-79291455 None:intergenic 25.0%
! GATCTTGTTAATGTTATTGT+AGG - chr3_2:79291560-79291579 None:intergenic 25.0%
! TTGCATTTTCAAACACATCA+TGG + chr3_2:79288806-79288825 Msa0428420:exon 30.0%
TACTCAGAAAAATAGTCCTA+CGG + chr3_2:79289073-79289092 Msa0428420:CDS 30.0%
! AGTGATATATATGATGGAGA+TGG - chr3_2:79289168-79289187 None:intergenic 30.0%
TCTAGCAGTGATATATATGA+TGG - chr3_2:79289174-79289193 None:intergenic 30.0%
ATCTCTAATTCTTCTGTCAT+AGG - chr3_2:79289243-79289262 None:intergenic 30.0%
GAAAAACAAAGAAGATGAGA+AGG + chr3_2:79289478-79289497 Msa0428420:CDS 30.0%
!! AAAAGATCAGAGAAAGTGTT+TGG + chr3_2:79289514-79289533 Msa0428420:CDS 30.0%
TTGGAATTGTATCATACAAG+TGG - chr3_2:79289655-79289674 None:intergenic 30.0%
GAGACATGAAGATAACTAAA+AGG - chr3_2:79289685-79289704 None:intergenic 30.0%
GAAGAGAGAAAATAAGTGAA+AGG + chr3_2:79289755-79289774 Msa0428420:CDS 30.0%
!! AATATTCTCAAGCTGTTTTG+TGG + chr3_2:79290047-79290066 Msa0428420:intron 30.0%
! TCAGCTTCAATTTTTCTACA+AGG + chr3_2:79290462-79290481 Msa0428420:CDS 30.0%
! CAGCTTCAATTTTTCTACAA+GGG + chr3_2:79290463-79290482 Msa0428420:CDS 30.0%
CAAAAGTTTCTTCATTCACA+TGG + chr3_2:79290640-79290659 Msa0428420:CDS 30.0%
!!! AACATGTTGGTAGTTTTGTA+GGG - chr3_2:79290720-79290739 None:intergenic 30.0%
!!! AAACATGTTGGTAGTTTTGT+AGG - chr3_2:79290721-79290740 None:intergenic 30.0%
!!! TCAACTCTTATGTTGCTTTT+TGG - chr3_2:79290874-79290893 None:intergenic 30.0%
AATACCAAGTGTTAATCCAT+AGG - chr3_2:79290914-79290933 None:intergenic 30.0%
!!! TCTGCATTTTCTGTCATTTT+CGG - chr3_2:79290982-79291001 None:intergenic 30.0%
AAATAACTGAAACGGAACAA+CGG - chr3_2:79291034-79291053 None:intergenic 30.0%
ATTTCAATGTCTACTTAGCT+AGG - chr3_2:79291099-79291118 None:intergenic 30.0%
GTTGAATACATTATTCGCTA+CGG + chr3_2:79291219-79291238 Msa0428420:intron 30.0%
! TGAATGAATCTACTGAGTTT+TGG + chr3_2:79291453-79291472 Msa0428420:three_prime_UTR 30.0%
TTTGGCATCATTATACTGTA+TGG + chr3_2:79291471-79291490 Msa0428420:three_prime_UTR 30.0%
TATTTATGGTTTCAGCTGTA+TGG + chr3_2:79291529-79291548 Msa0428420:three_prime_UTR 30.0%
!! AAAGTTGGTGTGTGACAAAA+AGG - chr3_2:79288733-79288752 None:intergenic 35.0%
! ATAGTAATGAAGCGCTCAAA+AGG - chr3_2:79288756-79288775 None:intergenic 35.0%
AGGTTGTTCTTAAGAAAGAG+TGG - chr3_2:79288784-79288803 None:intergenic 35.0%
AATGATGAGTCAACAAGGAA+AGG - chr3_2:79288855-79288874 None:intergenic 35.0%
CTCAGTTATGGTAGTAACTT+TGG - chr3_2:79288970-79288989 None:intergenic 35.0%
AGAAGGTTCATTCTCAGTTA+TGG - chr3_2:79288982-79289001 None:intergenic 35.0%
!!! AGGTTTTTGGTGAAAGAAGA+AGG - chr3_2:79288999-79289018 None:intergenic 35.0%
GTCTTTACAGAATCAAGTAG+AGG + chr3_2:79290017-79290036 Msa0428420:CDS 35.0%
GAATCCTATGTTCTATGACA+TGG + chr3_2:79290161-79290180 Msa0428420:CDS 35.0%
TGATGATTCACATGTTAGCT+AGG + chr3_2:79290244-79290263 Msa0428420:intron 35.0%
! GACACAGATGATAATGTTGA+TGG - chr3_2:79290342-79290361 None:intergenic 35.0%
CATTGCAATAGTCCTAAACA+AGG + chr3_2:79290363-79290382 Msa0428420:CDS 35.0%
ATTAGTAGCTTGGAAGATGT+TGG - chr3_2:79290424-79290443 None:intergenic 35.0%
AAAGGTAGTCATTAGTAGCT+TGG - chr3_2:79290434-79290453 None:intergenic 35.0%
! AGCTACTAATGACTACCTTT+TGG + chr3_2:79290434-79290453 Msa0428420:CDS 35.0%
! TTGAAGCTGAAGTATCCAAA+AGG - chr3_2:79290452-79290471 None:intergenic 35.0%
! CAATTTTTCTACAAGGGCAA+AGG + chr3_2:79290469-79290488 Msa0428420:CDS 35.0%
!! TTCAGGATGGTAGTCATTTT+TGG + chr3_2:79290599-79290618 Msa0428420:intron 35.0%
!!! TCAGGATGGTAGTCATTTTT+GGG + chr3_2:79290600-79290619 Msa0428420:intron 35.0%
TTGAGAGCTTACAAACATGT+TGG - chr3_2:79290733-79290752 None:intergenic 35.0%
! TACTCCTATGGATTAACACT+TGG + chr3_2:79290907-79290926 Msa0428420:three_prime_UTR 35.0%
CAACGGATCTAGAAAAGATA+TGG - chr3_2:79291017-79291036 None:intergenic 35.0%
! TAGGATCAATACTAGTCTCT+CGG - chr3_2:79291080-79291099 None:intergenic 35.0%
! GAAGTAGTGATTGATTCTTG+TGG + chr3_2:79291139-79291158 Msa0428420:three_prime_UTR 35.0%
AATACTTCCATGACATTGCT+TGG + chr3_2:79291244-79291263 Msa0428420:intron 35.0%
ATACTTCCATGACATTGCTT+GGG + chr3_2:79291245-79291264 Msa0428420:intron 35.0%
ATGAGTCAACAAGGAAAGGA+TGG - chr3_2:79288851-79288870 None:intergenic 40.0%
GCATGAATGATGAGTCAACA+AGG - chr3_2:79288860-79288879 None:intergenic 40.0%
!! AGACTGTGGACTAAGGTTTT+TGG - chr3_2:79289012-79289031 None:intergenic 40.0%
! GTTCTGGACAAGCTTGAAAA+TGG + chr3_2:79289038-79289057 Msa0428420:CDS 40.0%
! GTGAGGGTTAGTATTGTTTC+TGG - chr3_2:79289114-79289133 None:intergenic 40.0%
TGTACTATACCCTTTCAGCA+AGG - chr3_2:79289604-79289623 None:intergenic 40.0%
ACCTTCATGACAGCACATAT+AGG + chr3_2:79289831-79289850 Msa0428420:intron 40.0%
! ATTTTGCTCCCTTTGTAACC+AGG + chr3_2:79289948-79289967 Msa0428420:intron 40.0%
TCCAGTTACCTGGTTACAAA+GGG - chr3_2:79289959-79289978 None:intergenic 40.0%
TTCCAGTTACCTGGTTACAA+AGG - chr3_2:79289960-79289979 None:intergenic 40.0%
TTGTAACCAGGTAACTGGAA+AGG + chr3_2:79289960-79289979 Msa0428420:intron 40.0%
GTTGCCATGTCATAGAACAT+AGG - chr3_2:79290168-79290187 None:intergenic 40.0%
! AACAGACCTAGACACTCTTT+TGG + chr3_2:79290185-79290204 Msa0428420:CDS 40.0%
!! GTCTAACCAAAAGAGTGTCT+AGG - chr3_2:79290194-79290213 None:intergenic 40.0%
!! CACTCTTTTGGTTAGACAAG+AGG + chr3_2:79290197-79290216 Msa0428420:CDS 40.0%
!! GCAAAAGTTGTGCCTTGTTT+AGG - chr3_2:79290378-79290397 None:intergenic 40.0%
GTCATCAAATGTTGTCTCTG+AGG + chr3_2:79290491-79290510 Msa0428420:CDS 40.0%
! GTAGTGATTGATTCTTGTGG+TGG + chr3_2:79291142-79291161 Msa0428420:three_prime_UTR 40.0%
!! GTTTGATTTTTCACTCGAGC+TGG - chr3_2:79291615-79291634 None:intergenic 40.0%
! GAAGCGCTCAAAAGGAAAGT+TGG - chr3_2:79288748-79288767 None:intergenic 45.0%
TGAAGAGGGTGAAACTGTGA+AGG - chr3_2:79288912-79288931 None:intergenic 45.0%
TTCAAGCTTGTCCAGAACCA+TGG - chr3_2:79289036-79289055 None:intergenic 45.0%
! GCTTGAAAATGGTGATGAGC+AGG + chr3_2:79289049-79289068 Msa0428420:CDS 45.0%
ATAGTCCTACGGAGAAGAAG+AGG + chr3_2:79289084-79289103 Msa0428420:CDS 45.0%
TGACAGGATAATGCAGCAGA+AGG + chr3_2:79289437-79289456 Msa0428420:intron 45.0%
GACAGGATAATGCAGCAGAA+GGG + chr3_2:79289438-79289457 Msa0428420:intron 45.0%
GCCTATATGTGCTGTCATGA+AGG - chr3_2:79289835-79289854 None:intergenic 45.0%
TCCCTTTGTAACCAGGTAAC+TGG + chr3_2:79289955-79289974 Msa0428420:intron 45.0%
TAAGAGCCTTTCCAGTTACC+TGG - chr3_2:79289969-79289988 None:intergenic 45.0%
! GAAGATGTTGGTTGGAGTCA+TGG - chr3_2:79290412-79290431 None:intergenic 45.0%
GTAGCTTGGAAGATGTTGGT+TGG - chr3_2:79290420-79290439 None:intergenic 45.0%
!!! GGATGGTAGTCATTTTTGGG+AGG + chr3_2:79290603-79290622 Msa0428420:intron 45.0%
CCATAGGAGTAGCTTCTTTC+TGG - chr3_2:79290898-79290917 None:intergenic 45.0%
CCAGAAAGAAGCTACTCCTA+TGG + chr3_2:79290895-79290914 Msa0428420:three_prime_UTR 45.0%
TGTGGTGGCAGTTATTCTGT+TGG + chr3_2:79291157-79291176 Msa0428420:three_prime_UTR 45.0%
GATTGCATCAGTGACACCAA+TGG - chr3_2:79291273-79291292 None:intergenic 45.0%
CACCCATCAACACACATCAA+CGG - chr3_2:79291300-79291319 None:intergenic 45.0%
! TTGATGTGTGTTGATGGGTG+TGG + chr3_2:79291300-79291319 Msa0428420:intron 45.0%
! TGATGTGTGTTGATGGGTGT+GGG + chr3_2:79291301-79291320 Msa0428420:intron 45.0%
ACACAACTATGGCACCAAAG+TGG + chr3_2:79291371-79291390 Msa0428420:intron 45.0%
CTACAAGGCCATGCATTTGT+TGG + chr3_2:79291404-79291423 Msa0428420:three_prime_UTR 45.0%
!! TCATAAAATATAATTATTTA+TGG + chr3_2:79289923-79289942 Msa0428420:intron 5.0%
!!! AATATTTTTTTTACTATTTA+TGG + chr3_2:79291515-79291534 Msa0428420:three_prime_UTR 5.0%
TGAAACTGTGAAGGTGGAGG+AGG - chr3_2:79288903-79288922 None:intergenic 50.0%
AGAGGGTGAAACTGTGAAGG+TGG - chr3_2:79288909-79288928 None:intergenic 50.0%
! CCATGGAAGACTGTGGACTA+AGG - chr3_2:79289019-79289038 None:intergenic 50.0%
CCTTAGTCCACAGTCTTCCA+TGG + chr3_2:79289016-79289035 Msa0428420:CDS 50.0%
TCCACAGTCTTCCATGGTTC+TGG + chr3_2:79289022-79289041 Msa0428420:CDS 50.0%
TCCAGAACCATGGAAGACTG+TGG - chr3_2:79289026-79289045 None:intergenic 50.0%
GTTCTCCTCTTCTTCTCCGT+AGG - chr3_2:79289092-79289111 None:intergenic 50.0%
TGTGTGTGTGTGTGTGTGCA+TGG - chr3_2:79289363-79289382 None:intergenic 50.0%
ACGTGGATATAGCCAGTTGG+GGG - chr3_2:79289545-79289564 None:intergenic 50.0%
GACGTGGATATAGCCAGTTG+GGG - chr3_2:79289546-79289565 None:intergenic 50.0%
GGACGTGGATATAGCCAGTT+GGG - chr3_2:79289547-79289566 None:intergenic 50.0%
ATATCCACGTCCGAGCAAGA+AGG + chr3_2:79289555-79289574 Msa0428420:CDS 50.0%
TATCCACGTCCGAGCAAGAA+GGG + chr3_2:79289556-79289575 Msa0428420:CDS 50.0%
ATAGCCACAGCCTTGCTGAA+AGG + chr3_2:79289591-79289610 Msa0428420:CDS 50.0%
TAGCCACAGCCTTGCTGAAA+GGG + chr3_2:79289592-79289611 Msa0428420:CDS 50.0%
ATACCCTTTCAGCAAGGCTG+TGG - chr3_2:79289598-79289617 None:intergenic 50.0%
AAGTTGCAGCAACTTGTGCC+AGG + chr3_2:79289784-79289803 Msa0428420:CDS 50.0%
ACTTGTGCCAGGCTGTGATA+AGG + chr3_2:79289795-79289814 Msa0428420:CDS 50.0%
TGACCTACCTTATCACAGCC+TGG - chr3_2:79289805-79289824 None:intergenic 50.0%
ATGGCACCCAAGCAATGTCA+TGG - chr3_2:79291254-79291273 None:intergenic 50.0%
! TGACATTGCTTGGGTGCCAT+TGG + chr3_2:79291254-79291273 Msa0428420:intron 50.0%
!! TGGTGTCACTGATGCAATCC+TGG + chr3_2:79291274-79291293 Msa0428420:intron 50.0%
ATCAACACACATCAACGGCC+AGG - chr3_2:79291295-79291314 None:intergenic 50.0%
TGGCCGTTGATGTGTGTTGA+TGG + chr3_2:79291294-79291313 Msa0428420:intron 50.0%
! GGCCGTTGATGTGTGTTGAT+GGG + chr3_2:79291295-79291314 Msa0428420:intron 50.0%
! GATGTGTGTTGATGGGTGTG+GGG + chr3_2:79291302-79291321 Msa0428420:intron 50.0%
GTGTGTGATGTGTGTGTGTG+TGG + chr3_2:79291329-79291348 Msa0428420:intron 50.0%
TGTGATGTGTGTGTGTGTGG+TGG + chr3_2:79291332-79291351 Msa0428420:intron 50.0%
GCACCAATGGCACACAACTA+TGG + chr3_2:79291360-79291379 Msa0428420:intron 50.0%
GTGCCATAGTTGTGTGCCAT+TGG - chr3_2:79291366-79291385 None:intergenic 50.0%
! GTAGCCAATGGGTTCCACTT+TGG - chr3_2:79291388-79291407 None:intergenic 50.0%
! AGTGGAACCCATTGGCTACA+AGG + chr3_2:79291389-79291408 Msa0428420:intron 50.0%
!! TGCATGGCCTTGTAGCCAAT+GGG - chr3_2:79291399-79291418 None:intergenic 50.0%
!! ATGCATGGCCTTGTAGCCAA+TGG - chr3_2:79291400-79291419 None:intergenic 50.0%
! GGCCATGCATTTGTTGGTCT+AGG + chr3_2:79291410-79291429 Msa0428420:three_prime_UTR 50.0%
GGCCTAGACCAACAAATGCA+TGG - chr3_2:79291415-79291434 None:intergenic 50.0%
GGGTGAAACTGTGAAGGTGG+AGG - chr3_2:79288906-79288925 None:intergenic 55.0%
TGTTTGGATGAGCCCCCAAC+TGG + chr3_2:79289530-79289549 Msa0428420:CDS 55.0%
CGGACGTGGATATAGCCAGT+TGG - chr3_2:79289548-79289567 None:intergenic 55.0%
ATCCACGTCCGAGCAAGAAG+GGG + chr3_2:79289557-79289576 Msa0428420:CDS 55.0%
AGCAAGGCTGTGGCTATCAG+TGG - chr3_2:79289588-79289607 None:intergenic 55.0%
GTGCCAGGCTGTGATAAGGT+AGG + chr3_2:79289799-79289818 Msa0428420:intron 55.0%
! GTGTGTGTGTGTGGTGGAGA+TGG + chr3_2:79291338-79291357 Msa0428420:intron 55.0%
! TGTGGTGGAGATGGCACCAA+TGG + chr3_2:79291347-79291366 Msa0428420:intron 55.0%
GGCACCAAAGTGGAACCCAT+TGG + chr3_2:79291381-79291400 Msa0428420:intron 55.0%
TGGCCTGACCCCTTCTTGCT+CGG - chr3_2:79289568-79289587 None:intergenic 60.0%
GACCCCTTCTTGCTCGGACG+TGG - chr3_2:79289562-79289581 None:intergenic 65.0%
CGTCCGAGCAAGAAGGGGTC+AGG + chr3_2:79289562-79289581 Msa0428420:CDS 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 79288730 79291694 79288730 ID=Msa0428420;Name=Msa0428420
chr3_2 mRNA 79288730 79291694 79288730 ID=Msa0428420-mRNA-1;Parent=Msa0428420;Name=Msa0428420-mRNA-1;_AED=0.13;_eAED=0.13;_QI=95|1|1|1|0.75|0.66|9|737|329
chr3_2 exon 79288730 79289139 79288730 ID=Msa0428420-mRNA-1:exon:21383;Parent=Msa0428420-mRNA-1
chr3_2 exon 79289443 79289613 79289443 ID=Msa0428420-mRNA-1:exon:21384;Parent=Msa0428420-mRNA-1
chr3_2 exon 79289751 79289816 79289751 ID=Msa0428420-mRNA-1:exon:21385;Parent=Msa0428420-mRNA-1
chr3_2 exon 79289970 79290038 79289970 ID=Msa0428420-mRNA-1:exon:21386;Parent=Msa0428420-mRNA-1
chr3_2 exon 79290135 79290218 79290135 ID=Msa0428420-mRNA-1:exon:21387;Parent=Msa0428420-mRNA-1
chr3_2 exon 79290318 79290512 79290318 ID=Msa0428420-mRNA-1:exon:21388;Parent=Msa0428420-mRNA-1
chr3_2 exon 79290604 79290740 79290604 ID=Msa0428420-mRNA-1:exon:21389;Parent=Msa0428420-mRNA-1
chr3_2 exon 79290837 79291235 79290837 ID=Msa0428420-mRNA-1:exon:21390;Parent=Msa0428420-mRNA-1
chr3_2 exon 79291404 79291694 79291404 ID=Msa0428420-mRNA-1:exon:21391;Parent=Msa0428420-mRNA-1
chr3_2 five_prime_UTR 79288730 79288824 79288730 ID=Msa0428420-mRNA-1:five_prime_utr;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79288825 79289139 79288825 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79289443 79289613 79289443 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79289751 79289816 79289751 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79289970 79290038 79289970 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79290135 79290218 79290135 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79290318 79290512 79290318 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 CDS 79290604 79290693 79290604 ID=Msa0428420-mRNA-1:cds;Parent=Msa0428420-mRNA-1
chr3_2 three_prime_UTR 79290694 79290740 79290694 ID=Msa0428420-mRNA-1:three_prime_utr;Parent=Msa0428420-mRNA-1
chr3_2 three_prime_UTR 79290837 79291235 79290837 ID=Msa0428420-mRNA-1:three_prime_utr;Parent=Msa0428420-mRNA-1
chr3_2 three_prime_UTR 79291404 79291694 79291404 ID=Msa0428420-mRNA-1:three_prime_utr;Parent=Msa0428420-mRNA-1
Gene Sequence

>Msa0428420

ATGGCAGCTTTTTCATATCAATACCATCCTTTCCTTGTTGACTCATCATTCATGCTCAACATGAACACTGCTTCTCCTCCTCCACCTTCACAGTTTCACCCTCTTCATCAAGATATTATTAACTGTGTTGATCAACAAAGCTCCAAAGTTACTACCATAACTGAGAATGAACCTTCTTCTTTCACCAAAAACCTTAGTCCACAGTCTTCCATGGTTCTGGACAAGCTTGAAAATGGTGATGAGCAGGTTACTCAGAAAAATAGTCCTACGGAGAAGAAGAGGAGAACCAGAAACAATACTAACCCTCACTCTCATGATAATGCAGCAGAAGGGAAAAACAAGAAACTGAAGAAAAACAAAGAAGATGAGAAGGCAAAAGCAGAGAAAAAAGATCAGAGAAAGTGTTTGGATGAGCCCCCAACTGGCTATATCCACGTCCGAGCAAGAAGGGGTCAGGCCACTGATAGCCACAGCCTTGCTGAAAGGGTAAGAAGAGAGAAAATAAGTGAAAGGATGAAGAAGTTGCAGCAACTTGTGCCAGGCTGTGATAAGGTAACTGGAAAGGCTCTTATGTTAGATGAAATAATCAATTATGTTCAGTCTTTACAGAATCAAGTAGAGTTCTTGTCAATGAAACTTACTTCTGTGAATCCTATGTTCTATGACATGGCAACAGACCTAGACACTCTTTTGGTTAGACAAGAGAAATTAAATAACTTGGCATCACCATCAACATTATCATCTGTGTCACATTGCAATAGTCCTAAACAAGGCACAACTTTTGCTGATACAACAACCATGACTCCAACCAACATCTTCCAAGCTACTAATGACTACCTTTTGGATACTTCAGCTTCAATTTTTCTACAAGGGCAAAGGTCATCAAATGTTGTCTCTGAGGATGGTAGTCATTTTTGGGAGGTAGAAGAGCAGAGACAAAAGTTTCTTCATTCACATGGATTCAACAGCAACTTATGTTCCTTTCATTAA
Protein sequence

>Msa0428420

MAAFSYQYHPFLVDSSFMLNMNTASPPPPSQFHPLHQDIINCVDQQSSKVTTITENEPSSFTKNLSPQSSMVLDKLENGDEQVTQKNSPTEKKRRTRNNTNPHSHDNAAEGKNKKLKKNKEDEKAKAEKKDQRKCLDEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKKLQQLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSMKLTSVNPMFYDMATDLDTLLVRQEKLNNLASPSTLSSVSHCNSPKQGTTFADTTTMTPTNIFQATNDYLLDTSASIFLQGQRSSNVVSEDGSHFWEVEEQRQKFLHSHGFNSNLCSFH*