AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0405040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405040 MtrunA17_Chr3g0095661 98.734 395 5 0 1 395 1 395 0.0 810
Msa0405040 MtrunA17_Chr5g0442671 79.648 398 68 4 1 395 1 388 0.0 648
Msa0405040 MtrunA17_Chr5g0433601 73.669 357 85 2 37 388 77 429 0.0 540
Msa0405040 MtrunA17_Chr3g0121311 69.395 281 86 0 98 378 87 367 7.10e-153 437
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0405040 AT5G17230.2 76.136 352 79 2 29 378 59 407 0.0 551
Msa0405040 AT5G17230.1 76.136 352 79 2 29 378 59 407 0.0 551
Msa0405040 AT5G17230.4 76.136 352 79 2 29 378 59 407 0.0 551
Msa0405040 AT5G17230.3 73.025 367 79 3 29 378 59 422 0.0 542

Find 95 sgRNAs with CRISPR-Local

Find 518 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATGTCTGGTGTTCTTCTT+TGG 0.203427 3_2:-38624766 Msa0405040:CDS
TGTTCATCTTGTAGTCATTT+TGG 0.206973 3_2:+38621135 None:intergenic
CCTTCAATCATGTCTTTAAA+TGG 0.223849 3_2:+38622017 None:intergenic
AGAGAATGCCATTTCCTTAA+TGG 0.264096 3_2:-38624726 Msa0405040:CDS
CTAATTAGACATACCGTAAA+TGG 0.264788 3_2:+38623557 None:intergenic
GAGAATGCCATTTCCTTAAT+GGG 0.302605 3_2:-38624725 Msa0405040:CDS
CAGCAAGTAGATGGCCTGTT+TGG 0.307680 3_2:-38621309 Msa0405040:CDS
GTGAGGCAATTAAATGGTTT+AGG 0.310639 3_2:+38624893 None:intergenic
TTATCACTTCCTGTTGCTCT+TGG 0.315689 3_2:-38621187 Msa0405040:CDS
TTCAAAAGCATTGAATAGTT+TGG 0.322489 3_2:-38621103 Msa0405040:three_prime_UTR
GATGCTCTCTGTTGAAGCTT+TGG 0.337629 3_2:+38621872 None:intergenic
CTTATGAGTGTTCCTGTAAT+GGG 0.347887 3_2:-38621909 Msa0405040:CDS
GCCATTTCCTTAATGGGTCT+TGG 0.351168 3_2:-38624719 Msa0405040:CDS
TGTGGTTCTATCCCCATTAC+AGG 0.351831 3_2:+38621897 None:intergenic
AGGAGGTTTAGACATTGTTC+TGG 0.362139 3_2:-38624674 Msa0405040:CDS
TCCCATCTGTCCAAGGCCTT+TGG 0.363807 3_2:+38623389 None:intergenic
CATGAAATTGCGCCATTTGT+CGG 0.363909 3_2:+38621399 None:intergenic
AGAAGAACACCAGACATCTT+AGG 0.368071 3_2:+38624770 None:intergenic
GGGCATCTTTGCTGTTGTAT+AGG 0.372606 3_2:-38621288 Msa0405040:CDS
CTATATTGCTACTATGTTGC+TGG 0.386898 3_2:-38621942 Msa0405040:CDS
GATGTCTGGTGTTCTTCTTT+GGG 0.389571 3_2:-38624765 Msa0405040:CDS
CAGCAACATAGTAGCAATAT+AGG 0.392016 3_2:+38621943 None:intergenic
AGCAAGTAGATGGCCTGTTT+GGG 0.395898 3_2:-38621308 Msa0405040:CDS
TAACCTACCTGTATATCAAC+AGG 0.395934 3_2:+38623287 None:intergenic
AAAGCCATATGGGCCATTTA+CGG 0.401396 3_2:-38623570 Msa0405040:intron
CTCTCCTCTGAGGATCTTGT+AGG 0.415075 3_2:+38624614 None:intergenic
GCTCTTGGAATAGCAACGTT+TGG 0.415641 3_2:-38621172 Msa0405040:CDS
TTGGTGAAATCACCTTCAAT+AGG 0.419066 3_2:+38624503 None:intergenic
TCCAAGACCCATTAAGGAAA+TGG 0.420248 3_2:+38624718 None:intergenic
GAAATATTATTCTAAATTTG+AGG 0.423196 3_2:+38624915 None:intergenic
AGCTCAGTTCAGCAAGTAGA+TGG 0.427080 3_2:-38621318 Msa0405040:CDS
GTACCTTCCGCAAGATGAAT+TGG 0.429606 3_2:-38621467 Msa0405040:CDS
TGTTCTATTCCTAAGATGTC+TGG 0.436560 3_2:-38624779 Msa0405040:exon
CCTTATGAGTGTTCCTGTAA+TGG 0.441118 3_2:-38621910 Msa0405040:CDS
TACTATGTTGCTGGGACTGT+GGG 0.445506 3_2:-38621933 Msa0405040:CDS
ACTATAATAACTTCACCAAA+CGG 0.449049 3_2:-38621237 Msa0405040:CDS
CATACCGTAAATGGCCCATA+TGG 0.458649 3_2:+38623566 None:intergenic
AAAGTACCCTGTTGATATAC+AGG 0.460407 3_2:-38623294 Msa0405040:intron
GTTCTTCTTTGGGTGAATTG+TGG 0.464290 3_2:-38624755 Msa0405040:CDS
GGTGTGATGTGTGAAGCATT+AGG 0.465088 3_2:+38623410 None:intergenic
AAGAGAGAAGAAAAGCCATA+TGG 0.465862 3_2:-38623581 Msa0405040:CDS
GTTGCTATTCCAAGAGCAAC+AGG 0.466089 3_2:+38621178 None:intergenic
TATTGTGTGTTTCCGAGATA+CGG 0.468415 3_2:-38620948 Msa0405040:three_prime_UTR
AACAGCAAAGATGCCCAAAC+AGG 0.470763 3_2:+38621295 None:intergenic
ACACATCACACCAAAGGCCT+TGG 0.473491 3_2:-38623399 Msa0405040:CDS
CTATAATAACTTCACCAAAC+GGG 0.476146 3_2:-38621236 Msa0405040:CDS
TTGGATGATAAGCCTATTGA+AGG 0.477265 3_2:-38624515 Msa0405040:CDS
TACAATGCTGCATTGGCACT+TGG 0.478711 3_2:-38621849 Msa0405040:CDS
CACCAAAGGCCTTGGACAGA+TGG 0.481447 3_2:-38623391 Msa0405040:CDS
CCATTTAAAGACATGATTGA+AGG 0.482461 3_2:-38622017 Msa0405040:CDS
CTACTATGTTGCTGGGACTG+TGG 0.486893 3_2:-38621934 Msa0405040:CDS
TATATTGCTACTATGTTGCT+GGG 0.488882 3_2:-38621941 Msa0405040:CDS
GCAGCATCATACATATCATA+AGG 0.497935 3_2:+38623335 None:intergenic
TCTGTTGAAGCTTTGGATTG+TGG 0.503008 3_2:+38621879 None:intergenic
AAAACACACTTTCCGTATCT+CGG 0.503216 3_2:+38620936 None:intergenic
TTGAAGGTGATTTCACCAAT+GGG 0.504638 3_2:-38624499 Msa0405040:CDS
ATTTCCTTAATGGGTCTTGG+AGG 0.509366 3_2:-38624716 Msa0405040:CDS
CAGAAGAACAGATGAGTTAG+TGG 0.511011 3_2:-38623438 Msa0405040:CDS
CCATTACAGGAACACTCATA+AGG 0.511875 3_2:+38621910 None:intergenic
CAAGATGAATTGGCACAAGC+TGG 0.511937 3_2:-38621457 Msa0405040:CDS
AAGACATGATTGAAGGGATG+AGG 0.513888 3_2:-38622010 Msa0405040:CDS
ATTGAAGGTGATTTCACCAA+TGG 0.516585 3_2:-38624500 Msa0405040:CDS
CATGATTGAAGGGATGAGGC+TGG 0.519563 3_2:-38622006 Msa0405040:CDS
TCTTTGTTCCCATCTGTCCA+AGG 0.520607 3_2:+38623382 None:intergenic
GAGGCAGAGTAACCGACAAA+TGG 0.531514 3_2:-38621411 Msa0405040:CDS
CTTCAACATTACTAAACTTG+AGG 0.532257 3_2:+38620989 None:intergenic
ACCAAAGGCCTTGGACAGAT+GGG 0.533995 3_2:-38623390 Msa0405040:CDS
CATTTAAAGACATGATTGAA+GGG 0.534248 3_2:-38622016 Msa0405040:CDS
TTCACCAAACGGGCTTATGT+AGG 0.535111 3_2:-38621226 Msa0405040:CDS
AGAGAGAAGAAAAGCCATAT+GGG 0.536115 3_2:-38623580 Msa0405040:CDS
TACAAGATCCTCAGAGGAGA+GGG 0.538242 3_2:-38624612 Msa0405040:CDS
GAGCATCTACAATGCTGCAT+TGG 0.547623 3_2:-38621856 Msa0405040:CDS
TAGTTTCCTAGAAATCAGAA+TGG 0.573289 3_2:-38621064 Msa0405040:three_prime_UTR
CAAATGGCGCAATTTCATGA+AGG 0.578152 3_2:-38621395 Msa0405040:CDS
GTGCCAATTCATCTTGCGGA+AGG 0.588837 3_2:+38621464 None:intergenic
TCCAACGTCTCTAAGTATGT+TGG 0.590935 3_2:+38621809 None:intergenic
AGAACTCAAAAGTTCCCCAT+TGG 0.594991 3_2:+38624484 None:intergenic
GCTTGTGCCAATTCATCTTG+CGG 0.595244 3_2:+38621460 None:intergenic
AGGGTCAAATAAAGAGAGCA+AGG 0.603555 3_2:-38621375 Msa0405040:CDS
ACCAACATACTTAGAGACGT+TGG 0.613097 3_2:-38621810 Msa0405040:CDS
AGAACAGATGAGTTAGTGGA+TGG 0.619649 3_2:-38623434 Msa0405040:CDS
AAATGGCGCAATTTCATGAA+GGG 0.620886 3_2:-38621394 Msa0405040:CDS
AGAGGAGAGGGTGTATGAAG+TGG 0.622701 3_2:-38624600 Msa0405040:CDS
GAAAAGATGTAAGAACTCAA+AGG 0.626190 3_2:-38624694 Msa0405040:CDS
TTATGAGTGTTCCTGTAATG+GGG 0.627271 3_2:-38621908 Msa0405040:CDS
TGCTTCACACATCACACCAA+AGG 0.631660 3_2:-38623405 Msa0405040:CDS
AGTTCTGCTTATGATAGATG+TGG 0.632966 3_2:-38624467 Msa0405040:CDS
GAAGCAAGCAGCCCTAGTGA+AGG 0.638244 3_2:-38624573 Msa0405040:CDS
CTACAAGATCCTCAGAGGAG+AGG 0.648794 3_2:-38624613 Msa0405040:CDS
TCGTCTTATAGTGCTAGAAG+AGG 0.652452 3_2:-38621496 Msa0405040:intron
TTCATACACCCTCTCCTCTG+AGG 0.670132 3_2:+38624604 None:intergenic
AAGATGTAAGAACTCAAAGG+AGG 0.687423 3_2:-38624691 Msa0405040:CDS
TGAAGGTGATTTCACCAATG+GGG 0.696835 3_2:-38624498 Msa0405040:CDS
AACCTACCTGTATATCAACA+GGG 0.701397 3_2:+38623288 None:intergenic
TGAACCTACAAGATCCTCAG+AGG 0.724557 3_2:-38624618 Msa0405040:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTTAACCATATTTATTA+TGG - chr3_2:38624279-38624298 Msa0405040:intron 10.0%
!! ATATTTAACCATATTTATTA+TGG - chr3_2:38624279-38624298 Msa0405040:intron 10.0%
!! GAAATATTATTCTAAATTTG+AGG + chr3_2:38620964-38620983 None:intergenic 15.0%
!!! TTGATAACATGAATATTTTT+TGG - chr3_2:38621520-38621539 Msa0405040:intron 15.0%
!!! TTATAATTTTGTCAAAATCA+CGG + chr3_2:38621979-38621998 None:intergenic 15.0%
!!! TATAATTTTTGAAGGTATAA+AGG + chr3_2:38622657-38622676 None:intergenic 15.0%
!!! ATTTAGCATTATTTTTGTTT+TGG + chr3_2:38623239-38623258 None:intergenic 15.0%
!!! ATTTATGTATATGTATTTTG+TGG + chr3_2:38623308-38623327 None:intergenic 15.0%
!!! ATTTCGTTATTTTTTGAAAA+GGG + chr3_2:38623495-38623514 None:intergenic 15.0%
!! GAAATATTATTCTAAATTTG+AGG + chr3_2:38620964-38620983 None:intergenic 15.0%
!!! TTGATAACATGAATATTTTT+TGG - chr3_2:38621520-38621539 Msa0405040:intron 15.0%
!!! TTATAATTTTGTCAAAATCA+CGG + chr3_2:38621979-38621998 None:intergenic 15.0%
!!! TATAATTTTTGAAGGTATAA+AGG + chr3_2:38622657-38622676 None:intergenic 15.0%
!!! ATTTAGCATTATTTTTGTTT+TGG + chr3_2:38623239-38623258 None:intergenic 15.0%
!!! ATTTATGTATATGTATTTTG+TGG + chr3_2:38623308-38623327 None:intergenic 15.0%
!!! ATTTCGTTATTTTTTGAAAA+GGG + chr3_2:38623495-38623514 None:intergenic 15.0%
!! TAGAGAAAAATATGAATGAA+AGG + chr3_2:38620936-38620955 None:intergenic 20.0%
!! AGAAAAGATATTAAAAAGAG+AGG - chr3_2:38621331-38621350 Msa0405040:CDS 20.0%
!!! TATGCAAAGACATTTTATTT+AGG - chr3_2:38621448-38621467 Msa0405040:CDS 20.0%
!! AATTTAGACGATATATCATA+GGG - chr3_2:38621681-38621700 Msa0405040:intron 20.0%
!!! TTTGAAGTTTTGATCAATAA+AGG + chr3_2:38622251-38622270 None:intergenic 20.0%
!! AAATTTCACATTTCAACTTT+GGG + chr3_2:38622632-38622651 None:intergenic 20.0%
!! TAAATTTCACATTTCAACTT+TGG + chr3_2:38622633-38622652 None:intergenic 20.0%
!! GAATATGTTTGCTTAAAATT+AGG - chr3_2:38622727-38622746 Msa0405040:intron 20.0%
!! ACCATCTTAAAATTTGTATT+TGG + chr3_2:38622943-38622962 None:intergenic 20.0%
!!! GATTTCGTTATTTTTTGAAA+AGG + chr3_2:38623496-38623515 None:intergenic 20.0%
!! ATAAATATGACTTGAAAATG+TGG - chr3_2:38623682-38623701 Msa0405040:intron 20.0%
!!! ATAGAAGGTACTTAATTTTA+AGG - chr3_2:38623791-38623810 Msa0405040:intron 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG - chr3_2:38624247-38624266 Msa0405040:intron 20.0%
!! TAGAGAAAAATATGAATGAA+AGG + chr3_2:38620936-38620955 None:intergenic 20.0%
!! AGAAAAGATATTAAAAAGAG+AGG - chr3_2:38621331-38621350 Msa0405040:CDS 20.0%
!!! TATGCAAAGACATTTTATTT+AGG - chr3_2:38621448-38621467 Msa0405040:CDS 20.0%
!! AATTTAGACGATATATCATA+GGG - chr3_2:38621681-38621700 Msa0405040:intron 20.0%
!!! TTTGAAGTTTTGATCAATAA+AGG + chr3_2:38622251-38622270 None:intergenic 20.0%
!! AAATTTCACATTTCAACTTT+GGG + chr3_2:38622632-38622651 None:intergenic 20.0%
!! TAAATTTCACATTTCAACTT+TGG + chr3_2:38622633-38622652 None:intergenic 20.0%
!! GAATATGTTTGCTTAAAATT+AGG - chr3_2:38622727-38622746 Msa0405040:intron 20.0%
!! ACCATCTTAAAATTTGTATT+TGG + chr3_2:38622943-38622962 None:intergenic 20.0%
!!! GATTTCGTTATTTTTTGAAA+AGG + chr3_2:38623496-38623515 None:intergenic 20.0%
!! ATAAATATGACTTGAAAATG+TGG - chr3_2:38623682-38623701 Msa0405040:intron 20.0%
!!! ATAGAAGGTACTTAATTTTA+AGG - chr3_2:38623791-38623810 Msa0405040:intron 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG - chr3_2:38624247-38624266 Msa0405040:intron 20.0%
!!! TGTAAAAGTACATCATTTTG+AGG + chr3_2:38620909-38620928 None:intergenic 25.0%
!!! TTTTTTGTGAGGCAATTAAA+TGG + chr3_2:38620992-38621011 None:intergenic 25.0%
!!! AAAAACTGTACTTTTTTGTG+AGG + chr3_2:38621003-38621022 None:intergenic 25.0%
! TAAAAAGAGAGGTTTGAATT+TGG - chr3_2:38621342-38621361 Msa0405040:CDS 25.0%
!! GCGAAAAATCTAAAACAAAA+GGG + chr3_2:38621486-38621505 None:intergenic 25.0%
!! TGCGAAAAATCTAAAACAAA+AGG + chr3_2:38621487-38621506 None:intergenic 25.0%
! GAATTTAGACGATATATCAT+AGG - chr3_2:38621680-38621699 Msa0405040:intron 25.0%
! ATGCTAATTAATAGTTCAGT+CGG + chr3_2:38621799-38621818 None:intergenic 25.0%
!! AAGACATCGTAAACTATTTT+TGG + chr3_2:38621853-38621872 None:intergenic 25.0%
! TTTGCGAATATGTTACATAA+CGG - chr3_2:38622033-38622052 Msa0405040:intron 25.0%
!!! ATATGTTACATAACGGATTT+AGG - chr3_2:38622040-38622059 Msa0405040:intron 25.0%
!!! TATGTTACATAACGGATTTA+GGG - chr3_2:38622041-38622060 Msa0405040:intron 25.0%
! ATATTGTAAGTTTGAATTGG+CGG + chr3_2:38622166-38622185 None:intergenic 25.0%
! CTTCAAAATTTCTGTTACAA+AGG - chr3_2:38622347-38622366 Msa0405040:intron 25.0%
! CTGTAATAATACATAAAGAG+TGG + chr3_2:38622411-38622430 None:intergenic 25.0%
! CTTTATGTATTATTACAGTG+TGG - chr3_2:38622413-38622432 Msa0405040:intron 25.0%
!!! AGATTAACTGATGTTTTTGA+AGG - chr3_2:38622514-38622533 Msa0405040:intron 25.0%
!! CAACTAGCTATAATTTTTGA+AGG + chr3_2:38622665-38622684 None:intergenic 25.0%
!! AAATTGATTTCATCTCTCTA+AGG - chr3_2:38622752-38622771 Msa0405040:intron 25.0%
!!! GCCAAATACAAATTTTAAGA+TGG - chr3_2:38622939-38622958 Msa0405040:intron 25.0%
!! AGAGACTATCTAAAATTTGA+TGG - chr3_2:38622966-38622985 Msa0405040:intron 25.0%
!! GAGACTATCTAAAATTTGAT+GGG - chr3_2:38622967-38622986 Msa0405040:intron 25.0%
! GTAATCAAGGTTATCAAAAT+CGG - chr3_2:38623063-38623082 Msa0405040:intron 25.0%
! TAATCAAGGTTATCAAAATC+GGG - chr3_2:38623064-38623083 Msa0405040:intron 25.0%
! AAATGAACATGTAACTAGTT+AGG - chr3_2:38623324-38623343 Msa0405040:CDS 25.0%
!! AGTGAAAGAATGAAATGTTT+TGG - chr3_2:38623399-38623418 Msa0405040:CDS 25.0%
!! TTGTCATTTAAGCAAATAGA+AGG - chr3_2:38623776-38623795 Msa0405040:intron 25.0%
! CATTTAAAGACATGATTGAA+GGG - chr3_2:38623860-38623879 Msa0405040:intron 25.0%
!! TATTGTATCTTGATTTTCTC+AGG + chr3_2:38623897-38623916 None:intergenic 25.0%
! CATTAATTAGAAATCGAACT+CGG - chr3_2:38624146-38624165 Msa0405040:intron 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG - chr3_2:38624246-38624265 Msa0405040:intron 25.0%
! ACCATATTTATTATGGATGA+TGG - chr3_2:38624286-38624305 Msa0405040:intron 25.0%
!!! CTAATTTTTTCTTGTTTCCA+TGG - chr3_2:38624357-38624376 Msa0405040:intron 25.0%
! ACTATAATAACTTCACCAAA+CGG - chr3_2:38624639-38624658 Msa0405040:CDS 25.0%
!!! TCATTTTGGTTAACTTTTGT+GGG + chr3_2:38624730-38624749 None:intergenic 25.0%
!!! TTCAAAAGCATTGAATAGTT+TGG - chr3_2:38624773-38624792 Msa0405040:exon 25.0%
!! TTTTTACCATTCTGATTTCT+AGG + chr3_2:38624821-38624840 None:intergenic 25.0%
!!! TGTAAAAGTACATCATTTTG+AGG + chr3_2:38620909-38620928 None:intergenic 25.0%
!!! TTTTTTGTGAGGCAATTAAA+TGG + chr3_2:38620992-38621011 None:intergenic 25.0%
!!! AAAAACTGTACTTTTTTGTG+AGG + chr3_2:38621003-38621022 None:intergenic 25.0%
! TAAAAAGAGAGGTTTGAATT+TGG - chr3_2:38621342-38621361 Msa0405040:CDS 25.0%
!! GCGAAAAATCTAAAACAAAA+GGG + chr3_2:38621486-38621505 None:intergenic 25.0%
!! TGCGAAAAATCTAAAACAAA+AGG + chr3_2:38621487-38621506 None:intergenic 25.0%
! GAATTTAGACGATATATCAT+AGG - chr3_2:38621680-38621699 Msa0405040:intron 25.0%
! ATGCTAATTAATAGTTCAGT+CGG + chr3_2:38621799-38621818 None:intergenic 25.0%
!! AAGACATCGTAAACTATTTT+TGG + chr3_2:38621853-38621872 None:intergenic 25.0%
! TTTGCGAATATGTTACATAA+CGG - chr3_2:38622033-38622052 Msa0405040:intron 25.0%
!!! ATATGTTACATAACGGATTT+AGG - chr3_2:38622040-38622059 Msa0405040:intron 25.0%
!!! TATGTTACATAACGGATTTA+GGG - chr3_2:38622041-38622060 Msa0405040:intron 25.0%
! ATATTGTAAGTTTGAATTGG+CGG + chr3_2:38622166-38622185 None:intergenic 25.0%
! CTTCAAAATTTCTGTTACAA+AGG - chr3_2:38622347-38622366 Msa0405040:intron 25.0%
! CTGTAATAATACATAAAGAG+TGG + chr3_2:38622411-38622430 None:intergenic 25.0%
! CTTTATGTATTATTACAGTG+TGG - chr3_2:38622413-38622432 Msa0405040:intron 25.0%
!!! AGATTAACTGATGTTTTTGA+AGG - chr3_2:38622514-38622533 Msa0405040:intron 25.0%
!! CAACTAGCTATAATTTTTGA+AGG + chr3_2:38622665-38622684 None:intergenic 25.0%
!! AAATTGATTTCATCTCTCTA+AGG - chr3_2:38622752-38622771 Msa0405040:intron 25.0%
!!! GCCAAATACAAATTTTAAGA+TGG - chr3_2:38622939-38622958 Msa0405040:intron 25.0%
!! AGAGACTATCTAAAATTTGA+TGG - chr3_2:38622966-38622985 Msa0405040:intron 25.0%
!! GAGACTATCTAAAATTTGAT+GGG - chr3_2:38622967-38622986 Msa0405040:intron 25.0%
! GTAATCAAGGTTATCAAAAT+CGG - chr3_2:38623063-38623082 Msa0405040:intron 25.0%
! TAATCAAGGTTATCAAAATC+GGG - chr3_2:38623064-38623083 Msa0405040:intron 25.0%
! AAATGAACATGTAACTAGTT+AGG - chr3_2:38623324-38623343 Msa0405040:CDS 25.0%
!! AGTGAAAGAATGAAATGTTT+TGG - chr3_2:38623399-38623418 Msa0405040:CDS 25.0%
!! TTGTCATTTAAGCAAATAGA+AGG - chr3_2:38623776-38623795 Msa0405040:intron 25.0%
! CATTTAAAGACATGATTGAA+GGG - chr3_2:38623860-38623879 Msa0405040:intron 25.0%
!! TATTGTATCTTGATTTTCTC+AGG + chr3_2:38623897-38623916 None:intergenic 25.0%
! CATTAATTAGAAATCGAACT+CGG - chr3_2:38624146-38624165 Msa0405040:intron 25.0%
!!! CGAAAAGTTGGTATATTTAT+AGG - chr3_2:38624246-38624265 Msa0405040:intron 25.0%
! ACCATATTTATTATGGATGA+TGG - chr3_2:38624286-38624305 Msa0405040:intron 25.0%
!!! CTAATTTTTTCTTGTTTCCA+TGG - chr3_2:38624357-38624376 Msa0405040:intron 25.0%
! ACTATAATAACTTCACCAAA+CGG - chr3_2:38624639-38624658 Msa0405040:CDS 25.0%
!!! TCATTTTGGTTAACTTTTGT+GGG + chr3_2:38624730-38624749 None:intergenic 25.0%
!!! TTCAAAAGCATTGAATAGTT+TGG - chr3_2:38624773-38624792 Msa0405040:exon 25.0%
!! TTTTTACCATTCTGATTTCT+AGG + chr3_2:38624821-38624840 None:intergenic 25.0%
GAAAAGATGTAAGAACTCAA+AGG - chr3_2:38621182-38621201 Msa0405040:CDS 30.0%
! TTTTCTTTGTTCCTTCACTA+GGG + chr3_2:38621317-38621336 None:intergenic 30.0%
! ATGTAAAGAAGCTTTAGTCA+TGG - chr3_2:38621575-38621594 Msa0405040:intron 30.0%
ATGAAATTTGAACCGATATG+TGG + chr3_2:38621621-38621640 None:intergenic 30.0%
! CATACTTTTATCTTGCCTTT+TGG - chr3_2:38621638-38621657 Msa0405040:intron 30.0%
! ATTTGAGTTCAAATCCTAAC+TGG - chr3_2:38621743-38621762 Msa0405040:intron 30.0%
TAATTAATAGTTCAGTCGGA+AGG + chr3_2:38621795-38621814 None:intergenic 30.0%
GACTGAACTATTAATTAGCA+TGG - chr3_2:38621798-38621817 Msa0405040:intron 30.0%
TCTCTATCGAACTACTTATA+TGG + chr3_2:38621942-38621961 None:intergenic 30.0%
! TTTAGAGCTTCAACAAAACA+CGG + chr3_2:38622092-38622111 None:intergenic 30.0%
GTAAGCTATTGTCAAAAACA+CGG - chr3_2:38622114-38622133 Msa0405040:intron 30.0%
GCCAATTCAAACTTACAATA+TGG - chr3_2:38622165-38622184 Msa0405040:intron 30.0%
GCCATATTGTAAGTTTGAAT+TGG + chr3_2:38622169-38622188 None:intergenic 30.0%
GATCAATAAAGGACGAATAA+AGG + chr3_2:38622240-38622259 None:intergenic 30.0%
TGATCAAAACTTCAAATCTC+AGG - chr3_2:38622255-38622274 Msa0405040:intron 30.0%
CTAATTAGACATACCGTAAA+TGG + chr3_2:38622322-38622341 None:intergenic 30.0%
CTTGTATGACACACATATAA+GGG - chr3_2:38622779-38622798 Msa0405040:intron 30.0%
TCTTAAAACGTGTCATAAGT+GGG - chr3_2:38622873-38622892 Msa0405040:intron 30.0%
AAAATCGCAATCAAAATCGA+AGG - chr3_2:38623130-38623149 Msa0405040:intron 30.0%
! AAATCGAAGGATTTTACTCA+AGG - chr3_2:38623143-38623162 Msa0405040:intron 30.0%
! GACTTTTGTAGAATCGATAT+AGG - chr3_2:38623165-38623184 Msa0405040:intron 30.0%
TAAAATCGCAATCAAAATCG+AGG - chr3_2:38623129-38623148 Msa0405040:intron 30.0%
GTATTTATAGAACTGGATCA+TGG - chr3_2:38623430-38623449 Msa0405040:CDS 30.0%
!!! AGGATTTTGATGGATTTTGA+AGG + chr3_2:38623518-38623537 None:intergenic 30.0%
!! ATAGGATTTTGCCTGTTTTT+GGG - chr3_2:38623566-38623585 Msa0405040:intron 30.0%
CCTTCAATCATGTCTTTAAA+TGG + chr3_2:38623862-38623881 None:intergenic 30.0%
CCATTTAAAGACATGATTGA+AGG - chr3_2:38623859-38623878 Msa0405040:intron 30.0%
TATATTGCTACTATGTTGCT+GGG - chr3_2:38623935-38623954 Msa0405040:intron 30.0%
AGACATGTGGTTATAATTAG+AGG - chr3_2:38624215-38624234 Msa0405040:intron 30.0%
GCCATCATCCATAATAAATA+TGG + chr3_2:38624290-38624309 None:intergenic 30.0%
!!! GTGAGTTTTGAAGAAAACAT+GGG + chr3_2:38624314-38624333 None:intergenic 30.0%
!!! TGTGAGTTTTGAAGAAAACA+TGG + chr3_2:38624315-38624334 None:intergenic 30.0%
GAAAAATGTCATCATCTGAT+AGG + chr3_2:38624445-38624464 None:intergenic 30.0%
CTATAATAACTTCACCAAAC+GGG - chr3_2:38624640-38624659 Msa0405040:CDS 30.0%
!!! GTCATTTTGGTTAACTTTTG+TGG + chr3_2:38624731-38624750 None:intergenic 30.0%
! TGTTCATCTTGTAGTCATTT+TGG + chr3_2:38624744-38624763 None:intergenic 30.0%
TAGTTTCCTAGAAATCAGAA+TGG - chr3_2:38624812-38624831 Msa0405040:five_prime_UTR 30.0%
CTTCAACATTACTAAACTTG+AGG + chr3_2:38624890-38624909 None:intergenic 30.0%
!! ATACGGAAAGTGTGTTTTTA+GGG - chr3_2:38624945-38624964 Msa0405040:five_prime_UTR 30.0%
GAAAAGATGTAAGAACTCAA+AGG - chr3_2:38621182-38621201 Msa0405040:CDS 30.0%
! TTTTCTTTGTTCCTTCACTA+GGG + chr3_2:38621317-38621336 None:intergenic 30.0%
! ATGTAAAGAAGCTTTAGTCA+TGG - chr3_2:38621575-38621594 Msa0405040:intron 30.0%
ATGAAATTTGAACCGATATG+TGG + chr3_2:38621621-38621640 None:intergenic 30.0%
! CATACTTTTATCTTGCCTTT+TGG - chr3_2:38621638-38621657 Msa0405040:intron 30.0%
! ATTTGAGTTCAAATCCTAAC+TGG - chr3_2:38621743-38621762 Msa0405040:intron 30.0%
TAATTAATAGTTCAGTCGGA+AGG + chr3_2:38621795-38621814 None:intergenic 30.0%
GACTGAACTATTAATTAGCA+TGG - chr3_2:38621798-38621817 Msa0405040:intron 30.0%
TCTCTATCGAACTACTTATA+TGG + chr3_2:38621942-38621961 None:intergenic 30.0%
! TTTAGAGCTTCAACAAAACA+CGG + chr3_2:38622092-38622111 None:intergenic 30.0%
GTAAGCTATTGTCAAAAACA+CGG - chr3_2:38622114-38622133 Msa0405040:intron 30.0%
GCCAATTCAAACTTACAATA+TGG - chr3_2:38622165-38622184 Msa0405040:intron 30.0%
GCCATATTGTAAGTTTGAAT+TGG + chr3_2:38622169-38622188 None:intergenic 30.0%
GATCAATAAAGGACGAATAA+AGG + chr3_2:38622240-38622259 None:intergenic 30.0%
TGATCAAAACTTCAAATCTC+AGG - chr3_2:38622255-38622274 Msa0405040:intron 30.0%
CTAATTAGACATACCGTAAA+TGG + chr3_2:38622322-38622341 None:intergenic 30.0%
CTTGTATGACACACATATAA+GGG - chr3_2:38622779-38622798 Msa0405040:intron 30.0%
TCTTAAAACGTGTCATAAGT+GGG - chr3_2:38622873-38622892 Msa0405040:intron 30.0%
AAAATCGCAATCAAAATCGA+AGG - chr3_2:38623130-38623149 Msa0405040:intron 30.0%
! AAATCGAAGGATTTTACTCA+AGG - chr3_2:38623143-38623162 Msa0405040:intron 30.0%
! GACTTTTGTAGAATCGATAT+AGG - chr3_2:38623165-38623184 Msa0405040:intron 30.0%
TAAAATCGCAATCAAAATCG+AGG - chr3_2:38623129-38623148 Msa0405040:intron 30.0%
GTATTTATAGAACTGGATCA+TGG - chr3_2:38623430-38623449 Msa0405040:CDS 30.0%
!!! AGGATTTTGATGGATTTTGA+AGG + chr3_2:38623518-38623537 None:intergenic 30.0%
!! ATAGGATTTTGCCTGTTTTT+GGG - chr3_2:38623566-38623585 Msa0405040:intron 30.0%
CCTTCAATCATGTCTTTAAA+TGG + chr3_2:38623862-38623881 None:intergenic 30.0%
CCATTTAAAGACATGATTGA+AGG - chr3_2:38623859-38623878 Msa0405040:intron 30.0%
TATATTGCTACTATGTTGCT+GGG - chr3_2:38623935-38623954 Msa0405040:intron 30.0%
AGACATGTGGTTATAATTAG+AGG - chr3_2:38624215-38624234 Msa0405040:intron 30.0%
GCCATCATCCATAATAAATA+TGG + chr3_2:38624290-38624309 None:intergenic 30.0%
!!! GTGAGTTTTGAAGAAAACAT+GGG + chr3_2:38624314-38624333 None:intergenic 30.0%
!!! TGTGAGTTTTGAAGAAAACA+TGG + chr3_2:38624315-38624334 None:intergenic 30.0%
GAAAAATGTCATCATCTGAT+AGG + chr3_2:38624445-38624464 None:intergenic 30.0%
CTATAATAACTTCACCAAAC+GGG - chr3_2:38624640-38624659 Msa0405040:CDS 30.0%
!!! GTCATTTTGGTTAACTTTTG+TGG + chr3_2:38624731-38624750 None:intergenic 30.0%
! TGTTCATCTTGTAGTCATTT+TGG + chr3_2:38624744-38624763 None:intergenic 30.0%
TAGTTTCCTAGAAATCAGAA+TGG - chr3_2:38624812-38624831 Msa0405040:five_prime_UTR 30.0%
CTTCAACATTACTAAACTTG+AGG + chr3_2:38624890-38624909 None:intergenic 30.0%
!! ATACGGAAAGTGTGTTTTTA+GGG - chr3_2:38624945-38624964 Msa0405040:five_prime_UTR 30.0%
GTGAGGCAATTAAATGGTTT+AGG + chr3_2:38620986-38621005 None:intergenic 35.0%
TGTTCTATTCCTAAGATGTC+TGG - chr3_2:38621097-38621116 Msa0405040:three_prime_UTR 35.0%
! AGAGAATGCCATTTCCTTAA+TGG - chr3_2:38621150-38621169 Msa0405040:CDS 35.0%
! GAGAATGCCATTTCCTTAAT+GGG - chr3_2:38621151-38621170 Msa0405040:CDS 35.0%
AAGATGTAAGAACTCAAAGG+AGG - chr3_2:38621185-38621204 Msa0405040:CDS 35.0%
! CTTTTCTTTGTTCCTTCACT+AGG + chr3_2:38621318-38621337 None:intergenic 35.0%
TTGGATGATAAGCCTATTGA+AGG - chr3_2:38621361-38621380 Msa0405040:CDS 35.0%
TTGGTGAAATCACCTTCAAT+AGG + chr3_2:38621376-38621395 None:intergenic 35.0%
ATTGAAGGTGATTTCACCAA+TGG - chr3_2:38621376-38621395 Msa0405040:CDS 35.0%
TTGAAGGTGATTTCACCAAT+GGG - chr3_2:38621377-38621396 Msa0405040:CDS 35.0%
AGTTCTGCTTATGATAGATG+TGG - chr3_2:38621409-38621428 Msa0405040:CDS 35.0%
! CTCTAGAAGTAACCACATAT+CGG - chr3_2:38621606-38621625 Msa0405040:intron 35.0%
TTCCACTAGAATCAACCAAA+AGG + chr3_2:38621656-38621675 None:intergenic 35.0%
TAAAACGATTGACGAGCAAA+AGG + chr3_2:38621720-38621739 None:intergenic 35.0%
ATCCTAACTGGAACAATCAT+CGG - chr3_2:38621755-38621774 Msa0405040:intron 35.0%
CTTAACTTTGTACCGAAATG+TGG - chr3_2:38621870-38621889 Msa0405040:CDS 35.0%
! GTGTCACTAGGATATTCTTT+CGG + chr3_2:38621910-38621929 None:intergenic 35.0%
AAGAGAGAAGAAAAGCCATA+TGG - chr3_2:38622295-38622314 Msa0405040:intron 35.0%
AGAGAGAAGAAAAGCCATAT+GGG - chr3_2:38622296-38622315 Msa0405040:intron 35.0%
TTACAAAGGCTTCTCTAATG+TGG - chr3_2:38622361-38622380 Msa0405040:intron 35.0%
GCAGCATCATACATATCATA+AGG + chr3_2:38622544-38622563 None:intergenic 35.0%
! AAAGTACCCTGTTGATATAC+AGG - chr3_2:38622582-38622601 Msa0405040:intron 35.0%
AACCTACCTGTATATCAACA+GGG + chr3_2:38622591-38622610 None:intergenic 35.0%
TAACCTACCTGTATATCAAC+AGG + chr3_2:38622592-38622611 None:intergenic 35.0%
AGAACTCAAACTAGTCAATG+AGG - chr3_2:38622705-38622724 Msa0405040:intron 35.0%
GCTTGTATGACACACATATA+AGG - chr3_2:38622778-38622797 Msa0405040:intron 35.0%
GTCTTAAAACGTGTCATAAG+TGG - chr3_2:38622872-38622891 Msa0405040:intron 35.0%
!! ACAACTGGCTTGTAAGTTTA+TGG + chr3_2:38622905-38622924 None:intergenic 35.0%
! AACTTACAAGCCAGTTGTTT+TGG - chr3_2:38622907-38622926 Msa0405040:intron 35.0%
! ATTTCAAGTGTTCGATGTGA+TGG - chr3_2:38623020-38623039 Msa0405040:intron 35.0%
GGAGTCTTACATTGTAATCA+AGG - chr3_2:38623050-38623069 Msa0405040:intron 35.0%
GACTTTACTTCAAGTCGAAA+GGG - chr3_2:38623086-38623105 Msa0405040:intron 35.0%
TCGATATAGGATAGCAAAGT+CGG - chr3_2:38623178-38623197 Msa0405040:intron 35.0%
AGATGAACGTGTAACTATTG+AGG - chr3_2:38623365-38623384 Msa0405040:CDS 35.0%
!!! AATGAAATGTTTTGGCCTTG+TGG - chr3_2:38623407-38623426 Msa0405040:CDS 35.0%
!!! ATGAAATGTTTTGGCCTTGT+GGG - chr3_2:38623408-38623427 Msa0405040:CDS 35.0%
CAGTTCTATAAATACCCACA+AGG + chr3_2:38623425-38623444 None:intergenic 35.0%
CTTGTGGGTATTTATAGAAC+TGG - chr3_2:38623423-38623442 Msa0405040:CDS 35.0%
AACTGGATCATGGATTCAAT+CGG - chr3_2:38623440-38623459 Msa0405040:CDS 35.0%
AATCGGGTCAATTTACAAAC+CGG - chr3_2:38623457-38623476 Msa0405040:intron 35.0%
! AAAAGGGTCAATTTTTGACC+CGG + chr3_2:38623479-38623498 None:intergenic 35.0%
! TCAAAATCGCAGGATTTTGA+TGG + chr3_2:38623528-38623547 None:intergenic 35.0%
! CAAAATCCTGCGATTTTGAA+CGG - chr3_2:38623529-38623548 Msa0405040:intron 35.0%
!! ACGGATTTCACGATTTTGAT+AGG - chr3_2:38623548-38623567 Msa0405040:intron 35.0%
! GATAGGATTTTGCCTGTTTT+TGG - chr3_2:38623565-38623584 Msa0405040:intron 35.0%
! GTCGTAAAAACCTGGATTTT+TGG - chr3_2:38623626-38623645 Msa0405040:intron 35.0%
! AAAAATGACTTGCAAGACGA+AGG + chr3_2:38623721-38623740 None:intergenic 35.0%
CAGCAACATAGTAGCAATAT+AGG + chr3_2:38623936-38623955 None:intergenic 35.0%
CTATATTGCTACTATGTTGC+TGG - chr3_2:38623934-38623953 Msa0405040:intron 35.0%
CTTATGAGTGTTCCTGTAAT+GGG - chr3_2:38623967-38623986 Msa0405040:intron 35.0%
TTATGAGTGTTCCTGTAATG+GGG - chr3_2:38623968-38623987 Msa0405040:intron 35.0%
GAGGAACTAAAACGAAAAGT+TGG - chr3_2:38624234-38624253 Msa0405040:intron 35.0%
! TCAGATGATGACATTTTTCG+AGG - chr3_2:38624446-38624465 Msa0405040:CDS 35.0%
AAATGGCGCAATTTCATGAA+GGG - chr3_2:38624482-38624501 Msa0405040:CDS 35.0%
!!! AGCAAGGATGTTTTTTGATG+AGG - chr3_2:38624517-38624536 Msa0405040:CDS 35.0%
!!! TTTTTTGATGAGGCAGAGAA+GGG - chr3_2:38624527-38624546 Msa0405040:CDS 35.0%
TATTGTGTGTTTCCGAGATA+CGG - chr3_2:38624928-38624947 Msa0405040:five_prime_UTR 35.0%
AAAACACACTTTCCGTATCT+CGG + chr3_2:38624943-38624962 None:intergenic 35.0%
!! GATACGGAAAGTGTGTTTTT+AGG - chr3_2:38624944-38624963 Msa0405040:five_prime_UTR 35.0%
!!! TACGGAAAGTGTGTTTTTAG+GGG - chr3_2:38624946-38624965 Msa0405040:five_prime_UTR 35.0%
!! TTTTAGGGGACAAAAAGTGT+TGG - chr3_2:38624960-38624979 Msa0405040:five_prime_UTR 35.0%
!! TTTAGGGGACAAAAAGTGTT+GGG - chr3_2:38624961-38624980 Msa0405040:five_prime_UTR 35.0%
GTGAGGCAATTAAATGGTTT+AGG + chr3_2:38620986-38621005 None:intergenic 35.0%
TGTTCTATTCCTAAGATGTC+TGG - chr3_2:38621097-38621116 Msa0405040:three_prime_UTR 35.0%
! AGAGAATGCCATTTCCTTAA+TGG - chr3_2:38621150-38621169 Msa0405040:CDS 35.0%
! GAGAATGCCATTTCCTTAAT+GGG - chr3_2:38621151-38621170 Msa0405040:CDS 35.0%
AAGATGTAAGAACTCAAAGG+AGG - chr3_2:38621185-38621204 Msa0405040:CDS 35.0%
! CTTTTCTTTGTTCCTTCACT+AGG + chr3_2:38621318-38621337 None:intergenic 35.0%
TTGGATGATAAGCCTATTGA+AGG - chr3_2:38621361-38621380 Msa0405040:CDS 35.0%
TTGGTGAAATCACCTTCAAT+AGG + chr3_2:38621376-38621395 None:intergenic 35.0%
ATTGAAGGTGATTTCACCAA+TGG - chr3_2:38621376-38621395 Msa0405040:CDS 35.0%
TTGAAGGTGATTTCACCAAT+GGG - chr3_2:38621377-38621396 Msa0405040:CDS 35.0%
AGTTCTGCTTATGATAGATG+TGG - chr3_2:38621409-38621428 Msa0405040:CDS 35.0%
! CTCTAGAAGTAACCACATAT+CGG - chr3_2:38621606-38621625 Msa0405040:intron 35.0%
TTCCACTAGAATCAACCAAA+AGG + chr3_2:38621656-38621675 None:intergenic 35.0%
TAAAACGATTGACGAGCAAA+AGG + chr3_2:38621720-38621739 None:intergenic 35.0%
ATCCTAACTGGAACAATCAT+CGG - chr3_2:38621755-38621774 Msa0405040:intron 35.0%
CTTAACTTTGTACCGAAATG+TGG - chr3_2:38621870-38621889 Msa0405040:CDS 35.0%
! GTGTCACTAGGATATTCTTT+CGG + chr3_2:38621910-38621929 None:intergenic 35.0%
AAGAGAGAAGAAAAGCCATA+TGG - chr3_2:38622295-38622314 Msa0405040:intron 35.0%
AGAGAGAAGAAAAGCCATAT+GGG - chr3_2:38622296-38622315 Msa0405040:intron 35.0%
TTACAAAGGCTTCTCTAATG+TGG - chr3_2:38622361-38622380 Msa0405040:intron 35.0%
GCAGCATCATACATATCATA+AGG + chr3_2:38622544-38622563 None:intergenic 35.0%
! AAAGTACCCTGTTGATATAC+AGG - chr3_2:38622582-38622601 Msa0405040:intron 35.0%
AACCTACCTGTATATCAACA+GGG + chr3_2:38622591-38622610 None:intergenic 35.0%
TAACCTACCTGTATATCAAC+AGG + chr3_2:38622592-38622611 None:intergenic 35.0%
AGAACTCAAACTAGTCAATG+AGG - chr3_2:38622705-38622724 Msa0405040:intron 35.0%
GCTTGTATGACACACATATA+AGG - chr3_2:38622778-38622797 Msa0405040:intron 35.0%
GTCTTAAAACGTGTCATAAG+TGG - chr3_2:38622872-38622891 Msa0405040:intron 35.0%
!! ACAACTGGCTTGTAAGTTTA+TGG + chr3_2:38622905-38622924 None:intergenic 35.0%
! AACTTACAAGCCAGTTGTTT+TGG - chr3_2:38622907-38622926 Msa0405040:intron 35.0%
! ATTTCAAGTGTTCGATGTGA+TGG - chr3_2:38623020-38623039 Msa0405040:intron 35.0%
GGAGTCTTACATTGTAATCA+AGG - chr3_2:38623050-38623069 Msa0405040:intron 35.0%
GACTTTACTTCAAGTCGAAA+GGG - chr3_2:38623086-38623105 Msa0405040:intron 35.0%
TCGATATAGGATAGCAAAGT+CGG - chr3_2:38623178-38623197 Msa0405040:intron 35.0%
AGATGAACGTGTAACTATTG+AGG - chr3_2:38623365-38623384 Msa0405040:CDS 35.0%
!!! AATGAAATGTTTTGGCCTTG+TGG - chr3_2:38623407-38623426 Msa0405040:CDS 35.0%
!!! ATGAAATGTTTTGGCCTTGT+GGG - chr3_2:38623408-38623427 Msa0405040:CDS 35.0%
CAGTTCTATAAATACCCACA+AGG + chr3_2:38623425-38623444 None:intergenic 35.0%
CTTGTGGGTATTTATAGAAC+TGG - chr3_2:38623423-38623442 Msa0405040:CDS 35.0%
AACTGGATCATGGATTCAAT+CGG - chr3_2:38623440-38623459 Msa0405040:CDS 35.0%
AATCGGGTCAATTTACAAAC+CGG - chr3_2:38623457-38623476 Msa0405040:intron 35.0%
! AAAAGGGTCAATTTTTGACC+CGG + chr3_2:38623479-38623498 None:intergenic 35.0%
! TCAAAATCGCAGGATTTTGA+TGG + chr3_2:38623528-38623547 None:intergenic 35.0%
! CAAAATCCTGCGATTTTGAA+CGG - chr3_2:38623529-38623548 Msa0405040:intron 35.0%
!! ACGGATTTCACGATTTTGAT+AGG - chr3_2:38623548-38623567 Msa0405040:intron 35.0%
! GATAGGATTTTGCCTGTTTT+TGG - chr3_2:38623565-38623584 Msa0405040:intron 35.0%
! GTCGTAAAAACCTGGATTTT+TGG - chr3_2:38623626-38623645 Msa0405040:intron 35.0%
! AAAAATGACTTGCAAGACGA+AGG + chr3_2:38623721-38623740 None:intergenic 35.0%
CAGCAACATAGTAGCAATAT+AGG + chr3_2:38623936-38623955 None:intergenic 35.0%
CTATATTGCTACTATGTTGC+TGG - chr3_2:38623934-38623953 Msa0405040:intron 35.0%
CTTATGAGTGTTCCTGTAAT+GGG - chr3_2:38623967-38623986 Msa0405040:intron 35.0%
TTATGAGTGTTCCTGTAATG+GGG - chr3_2:38623968-38623987 Msa0405040:intron 35.0%
GAGGAACTAAAACGAAAAGT+TGG - chr3_2:38624234-38624253 Msa0405040:intron 35.0%
! TCAGATGATGACATTTTTCG+AGG - chr3_2:38624446-38624465 Msa0405040:CDS 35.0%
AAATGGCGCAATTTCATGAA+GGG - chr3_2:38624482-38624501 Msa0405040:CDS 35.0%
!!! AGCAAGGATGTTTTTTGATG+AGG - chr3_2:38624517-38624536 Msa0405040:CDS 35.0%
!!! TTTTTTGATGAGGCAGAGAA+GGG - chr3_2:38624527-38624546 Msa0405040:CDS 35.0%
TATTGTGTGTTTCCGAGATA+CGG - chr3_2:38624928-38624947 Msa0405040:five_prime_UTR 35.0%
AAAACACACTTTCCGTATCT+CGG + chr3_2:38624943-38624962 None:intergenic 35.0%
!! GATACGGAAAGTGTGTTTTT+AGG - chr3_2:38624944-38624963 Msa0405040:five_prime_UTR 35.0%
!!! TACGGAAAGTGTGTTTTTAG+GGG - chr3_2:38624946-38624965 Msa0405040:five_prime_UTR 35.0%
!! TTTTAGGGGACAAAAAGTGT+TGG - chr3_2:38624960-38624979 Msa0405040:five_prime_UTR 35.0%
!! TTTAGGGGACAAAAAGTGTT+GGG - chr3_2:38624961-38624980 Msa0405040:five_prime_UTR 35.0%
AGAAGAACACCAGACATCTT+AGG + chr3_2:38621109-38621128 None:intergenic 40.0%
AGATGTCTGGTGTTCTTCTT+TGG - chr3_2:38621110-38621129 Msa0405040:three_prime_UTR 40.0%
GATGTCTGGTGTTCTTCTTT+GGG - chr3_2:38621111-38621130 Msa0405040:three_prime_UTR 40.0%
GTTCTTCTTTGGGTGAATTG+TGG - chr3_2:38621121-38621140 Msa0405040:exon 40.0%
TCCAAGACCCATTAAGGAAA+TGG + chr3_2:38621161-38621180 None:intergenic 40.0%
! ATTTCCTTAATGGGTCTTGG+AGG - chr3_2:38621160-38621179 Msa0405040:CDS 40.0%
! TTTTCCTCCAAGACCCATTA+AGG + chr3_2:38621167-38621186 None:intergenic 40.0%
AGGAGGTTTAGACATTGTTC+TGG - chr3_2:38621202-38621221 Msa0405040:CDS 40.0%
TGAAGGTGATTTCACCAATG+GGG - chr3_2:38621378-38621397 Msa0405040:CDS 40.0%
AGAACTCAAAAGTTCCCCAT+TGG + chr3_2:38621395-38621414 None:intergenic 40.0%
!! TGCCTTTTGGTTGATTCTAG+TGG - chr3_2:38621651-38621670 Msa0405040:intron 40.0%
TCCATCTCTTCTACGAATGA+AGG - chr3_2:38621821-38621840 Msa0405040:CDS 40.0%
ACCTTCATTCGTAGAAGAGA+TGG + chr3_2:38621825-38621844 None:intergenic 40.0%
GGAAACTTGAGACCACATTT+CGG + chr3_2:38621885-38621904 None:intergenic 40.0%
CACTAGGATATTCTTTCGGT+AGG + chr3_2:38621906-38621925 None:intergenic 40.0%
! TGGATGATTGTAGTGTCACT+AGG + chr3_2:38621922-38621941 None:intergenic 40.0%
CACGCGTGATTATGTTAAAC+TGG - chr3_2:38622140-38622159 Msa0405040:intron 40.0%
AAAGCCATATGGGCCATTTA+CGG - chr3_2:38622306-38622325 Msa0405040:intron 40.0%
CAGAAGAACAGATGAGTTAG+TGG - chr3_2:38622438-38622457 Msa0405040:intron 40.0%
AGAACAGATGAGTTAGTGGA+TGG - chr3_2:38622442-38622461 Msa0405040:intron 40.0%
TACCCTGTTGATATACAGGT+AGG - chr3_2:38622586-38622605 Msa0405040:intron 40.0%
ACATTTCAACTTTGGGCATG+TGG + chr3_2:38622625-38622644 None:intergenic 40.0%
GTATGACACACATATAAGGG+TGG - chr3_2:38622782-38622801 Msa0405040:intron 40.0%
CCTAAATCAGCCAAAACAAC+TGG + chr3_2:38622920-38622939 None:intergenic 40.0%
!!! CCAGTTGTTTTGGCTGATTT+AGG - chr3_2:38622917-38622936 Msa0405040:intron 40.0%
CTGAAATGTAACCTGCAAGT+GGG + chr3_2:38623000-38623019 None:intergenic 40.0%
! TCTGAAATGTAACCTGCAAG+TGG + chr3_2:38623001-38623020 None:intergenic 40.0%
GGACTTTACTTCAAGTCGAA+AGG - chr3_2:38623085-38623104 Msa0405040:intron 40.0%
CGATATAGGATAGCAAAGTC+GGG - chr3_2:38623179-38623198 Msa0405040:intron 40.0%
! GTAACTATTGAGGAAGTGTG+AGG - chr3_2:38623375-38623394 Msa0405040:CDS 40.0%
ACTGGATCATGGATTCAATC+GGG - chr3_2:38623441-38623460 Msa0405040:CDS 40.0%
ATCGGGTCAATTTACAAACC+GGG - chr3_2:38623458-38623477 Msa0405040:intron 40.0%
TGAAATCCGTTCAAAATCGC+AGG + chr3_2:38623538-38623557 None:intergenic 40.0%
!!! CTGTTTTTGGGACTTTGCTA+GGG - chr3_2:38623578-38623597 Msa0405040:CDS 40.0%
TACGCAAAGTCGTAAAAACC+TGG - chr3_2:38623618-38623637 Msa0405040:intron 40.0%
CGACTTAAGTCCAAAAATCC+AGG + chr3_2:38623639-38623658 None:intergenic 40.0%
AAGACATGATTGAAGGGATG+AGG - chr3_2:38623866-38623885 Msa0405040:intron 40.0%
CCATTACAGGAACACTCATA+AGG + chr3_2:38623969-38623988 None:intergenic 40.0%
CCTTATGAGTGTTCCTGTAA+TGG - chr3_2:38623966-38623985 Msa0405040:intron 40.0%
!! TCTGTTGAAGCTTTGGATTG+TGG + chr3_2:38624000-38624019 None:intergenic 40.0%
ACCAACATACTTAGAGACGT+TGG - chr3_2:38624066-38624085 Msa0405040:intron 40.0%
TCCAACGTCTCTAAGTATGT+TGG + chr3_2:38624070-38624089 None:intergenic 40.0%
TCGTCTTATAGTGCTAGAAG+AGG - chr3_2:38624380-38624399 Msa0405040:intron 40.0%
CATGAAATTGCGCCATTTGT+CGG + chr3_2:38624480-38624499 None:intergenic 40.0%
CAAATGGCGCAATTTCATGA+AGG - chr3_2:38624481-38624500 Msa0405040:CDS 40.0%
AGGGTCAAATAAAGAGAGCA+AGG - chr3_2:38624501-38624520 Msa0405040:CDS 40.0%
!!! GTTTTTTGATGAGGCAGAGA+AGG - chr3_2:38624526-38624545 Msa0405040:CDS 40.0%
! TTTTCCTACATAAGCCCGTT+TGG + chr3_2:38624657-38624676 None:intergenic 40.0%
TTATCACTTCCTGTTGCTCT+TGG - chr3_2:38624689-38624708 Msa0405040:CDS 40.0%
!! TTAGGGGACAAAAAGTGTTG+GGG - chr3_2:38624962-38624981 Msa0405040:five_prime_UTR 40.0%
AGAAGAACACCAGACATCTT+AGG + chr3_2:38621109-38621128 None:intergenic 40.0%
AGATGTCTGGTGTTCTTCTT+TGG - chr3_2:38621110-38621129 Msa0405040:three_prime_UTR 40.0%
GATGTCTGGTGTTCTTCTTT+GGG - chr3_2:38621111-38621130 Msa0405040:three_prime_UTR 40.0%
GTTCTTCTTTGGGTGAATTG+TGG - chr3_2:38621121-38621140 Msa0405040:exon 40.0%
TCCAAGACCCATTAAGGAAA+TGG + chr3_2:38621161-38621180 None:intergenic 40.0%
! ATTTCCTTAATGGGTCTTGG+AGG - chr3_2:38621160-38621179 Msa0405040:CDS 40.0%
! TTTTCCTCCAAGACCCATTA+AGG + chr3_2:38621167-38621186 None:intergenic 40.0%
AGGAGGTTTAGACATTGTTC+TGG - chr3_2:38621202-38621221 Msa0405040:CDS 40.0%
TGAAGGTGATTTCACCAATG+GGG - chr3_2:38621378-38621397 Msa0405040:CDS 40.0%
AGAACTCAAAAGTTCCCCAT+TGG + chr3_2:38621395-38621414 None:intergenic 40.0%
!! TGCCTTTTGGTTGATTCTAG+TGG - chr3_2:38621651-38621670 Msa0405040:intron 40.0%
TCCATCTCTTCTACGAATGA+AGG - chr3_2:38621821-38621840 Msa0405040:CDS 40.0%
ACCTTCATTCGTAGAAGAGA+TGG + chr3_2:38621825-38621844 None:intergenic 40.0%
GGAAACTTGAGACCACATTT+CGG + chr3_2:38621885-38621904 None:intergenic 40.0%
CACTAGGATATTCTTTCGGT+AGG + chr3_2:38621906-38621925 None:intergenic 40.0%
! TGGATGATTGTAGTGTCACT+AGG + chr3_2:38621922-38621941 None:intergenic 40.0%
CACGCGTGATTATGTTAAAC+TGG - chr3_2:38622140-38622159 Msa0405040:intron 40.0%
AAAGCCATATGGGCCATTTA+CGG - chr3_2:38622306-38622325 Msa0405040:intron 40.0%
CAGAAGAACAGATGAGTTAG+TGG - chr3_2:38622438-38622457 Msa0405040:intron 40.0%
AGAACAGATGAGTTAGTGGA+TGG - chr3_2:38622442-38622461 Msa0405040:intron 40.0%
TACCCTGTTGATATACAGGT+AGG - chr3_2:38622586-38622605 Msa0405040:intron 40.0%
ACATTTCAACTTTGGGCATG+TGG + chr3_2:38622625-38622644 None:intergenic 40.0%
GTATGACACACATATAAGGG+TGG - chr3_2:38622782-38622801 Msa0405040:intron 40.0%
CCTAAATCAGCCAAAACAAC+TGG + chr3_2:38622920-38622939 None:intergenic 40.0%
!!! CCAGTTGTTTTGGCTGATTT+AGG - chr3_2:38622917-38622936 Msa0405040:intron 40.0%
CTGAAATGTAACCTGCAAGT+GGG + chr3_2:38623000-38623019 None:intergenic 40.0%
! TCTGAAATGTAACCTGCAAG+TGG + chr3_2:38623001-38623020 None:intergenic 40.0%
GGACTTTACTTCAAGTCGAA+AGG - chr3_2:38623085-38623104 Msa0405040:intron 40.0%
CGATATAGGATAGCAAAGTC+GGG - chr3_2:38623179-38623198 Msa0405040:intron 40.0%
! GTAACTATTGAGGAAGTGTG+AGG - chr3_2:38623375-38623394 Msa0405040:CDS 40.0%
ACTGGATCATGGATTCAATC+GGG - chr3_2:38623441-38623460 Msa0405040:CDS 40.0%
ATCGGGTCAATTTACAAACC+GGG - chr3_2:38623458-38623477 Msa0405040:intron 40.0%
TGAAATCCGTTCAAAATCGC+AGG + chr3_2:38623538-38623557 None:intergenic 40.0%
!!! CTGTTTTTGGGACTTTGCTA+GGG - chr3_2:38623578-38623597 Msa0405040:CDS 40.0%
TACGCAAAGTCGTAAAAACC+TGG - chr3_2:38623618-38623637 Msa0405040:intron 40.0%
CGACTTAAGTCCAAAAATCC+AGG + chr3_2:38623639-38623658 None:intergenic 40.0%
AAGACATGATTGAAGGGATG+AGG - chr3_2:38623866-38623885 Msa0405040:intron 40.0%
CCATTACAGGAACACTCATA+AGG + chr3_2:38623969-38623988 None:intergenic 40.0%
CCTTATGAGTGTTCCTGTAA+TGG - chr3_2:38623966-38623985 Msa0405040:intron 40.0%
!! TCTGTTGAAGCTTTGGATTG+TGG + chr3_2:38624000-38624019 None:intergenic 40.0%
ACCAACATACTTAGAGACGT+TGG - chr3_2:38624066-38624085 Msa0405040:intron 40.0%
TCCAACGTCTCTAAGTATGT+TGG + chr3_2:38624070-38624089 None:intergenic 40.0%
TCGTCTTATAGTGCTAGAAG+AGG - chr3_2:38624380-38624399 Msa0405040:intron 40.0%
CATGAAATTGCGCCATTTGT+CGG + chr3_2:38624480-38624499 None:intergenic 40.0%
CAAATGGCGCAATTTCATGA+AGG - chr3_2:38624481-38624500 Msa0405040:CDS 40.0%
AGGGTCAAATAAAGAGAGCA+AGG - chr3_2:38624501-38624520 Msa0405040:CDS 40.0%
!!! GTTTTTTGATGAGGCAGAGA+AGG - chr3_2:38624526-38624545 Msa0405040:CDS 40.0%
! TTTTCCTACATAAGCCCGTT+TGG + chr3_2:38624657-38624676 None:intergenic 40.0%
TTATCACTTCCTGTTGCTCT+TGG - chr3_2:38624689-38624708 Msa0405040:CDS 40.0%
!! TTAGGGGACAAAAAGTGTTG+GGG - chr3_2:38624962-38624981 Msa0405040:five_prime_UTR 40.0%
! GCCATTTCCTTAATGGGTCT+TGG - chr3_2:38621157-38621176 Msa0405040:CDS 45.0%
TGAACCTACAAGATCCTCAG+AGG - chr3_2:38621258-38621277 Msa0405040:CDS 45.0%
TACAAGATCCTCAGAGGAGA+GGG - chr3_2:38621264-38621283 Msa0405040:CDS 45.0%
GACCGATGATTGTTCCAGTT+AGG + chr3_2:38621760-38621779 None:intergenic 45.0%
CATACCGTAAATGGCCCATA+TGG + chr3_2:38622313-38622332 None:intergenic 45.0%
! GGCTTCTCTAATGTGGATTG+TGG - chr3_2:38622368-38622387 Msa0405040:intron 45.0%
AGAGTGGTCAGTTTCTACTG+AGG + chr3_2:38622395-38622414 None:intergenic 45.0%
! GGTGTGATGTGTGAAGCATT+AGG + chr3_2:38622469-38622488 None:intergenic 45.0%
TGCTTCACACATCACACCAA+AGG - chr3_2:38622471-38622490 Msa0405040:intron 45.0%
TCTTTGTTCCCATCTGTCCA+AGG + chr3_2:38622497-38622516 None:intergenic 45.0%
! GTTCGATGTGATGGAGTGTA+AGG - chr3_2:38623029-38623048 Msa0405040:intron 45.0%
TCGAAAGGGAGTAGCGAAAT+CGG - chr3_2:38623100-38623119 Msa0405040:intron 45.0%
CCTAGCAAAGTCCCAAAAAC+AGG + chr3_2:38623580-38623599 None:intergenic 45.0%
!!! CCTGTTTTTGGGACTTTGCT+AGG - chr3_2:38623577-38623596 Msa0405040:CDS 45.0%
TACTATGTTGCTGGGACTGT+GGG - chr3_2:38623943-38623962 Msa0405040:intron 45.0%
! TGTGGTTCTATCCCCATTAC+AGG + chr3_2:38623982-38624001 None:intergenic 45.0%
GATGCTCTCTGTTGAAGCTT+TGG + chr3_2:38624007-38624026 None:intergenic 45.0%
GAGCATCTACAATGCTGCAT+TGG - chr3_2:38624020-38624039 Msa0405040:intron 45.0%
! TACAATGCTGCATTGGCACT+TGG - chr3_2:38624027-38624046 Msa0405040:intron 45.0%
AGTGCTTGGTATGGAAAGTG+TGG + chr3_2:38624189-38624208 None:intergenic 45.0%
TCTAGCACAAGTGCTTGGTA+TGG + chr3_2:38624198-38624217 None:intergenic 45.0%
ACATGTCTAGCACAAGTGCT+TGG + chr3_2:38624203-38624222 None:intergenic 45.0%
AAGCACTTGTGCTAGACATG+TGG - chr3_2:38624202-38624221 Msa0405040:intron 45.0%
CTAGCACTATAAGACGACCA+TGG + chr3_2:38624377-38624396 None:intergenic 45.0%
GTACCTTCCGCAAGATGAAT+TGG - chr3_2:38624409-38624428 Msa0405040:intron 45.0%
GCTTGTGCCAATTCATCTTG+CGG + chr3_2:38624419-38624438 None:intergenic 45.0%
CAAGATGAATTGGCACAAGC+TGG - chr3_2:38624419-38624438 Msa0405040:intron 45.0%
AGCTCAGTTCAGCAAGTAGA+TGG - chr3_2:38624558-38624577 Msa0405040:CDS 45.0%
AGCAAGTAGATGGCCTGTTT+GGG - chr3_2:38624568-38624587 Msa0405040:CDS 45.0%
AACAGCAAAGATGCCCAAAC+AGG + chr3_2:38624584-38624603 None:intergenic 45.0%
!! GGGCATCTTTGCTGTTGTAT+AGG - chr3_2:38624588-38624607 Msa0405040:CDS 45.0%
! TTCACCAAACGGGCTTATGT+AGG - chr3_2:38624650-38624669 Msa0405040:CDS 45.0%
! GTTGCTATTCCAAGAGCAAC+AGG + chr3_2:38624701-38624720 None:intergenic 45.0%
GCTCTTGGAATAGCAACGTT+TGG - chr3_2:38624704-38624723 Msa0405040:CDS 45.0%
! GCCATTTCCTTAATGGGTCT+TGG - chr3_2:38621157-38621176 Msa0405040:CDS 45.0%
TGAACCTACAAGATCCTCAG+AGG - chr3_2:38621258-38621277 Msa0405040:CDS 45.0%
TACAAGATCCTCAGAGGAGA+GGG - chr3_2:38621264-38621283 Msa0405040:CDS 45.0%
GACCGATGATTGTTCCAGTT+AGG + chr3_2:38621760-38621779 None:intergenic 45.0%
CATACCGTAAATGGCCCATA+TGG + chr3_2:38622313-38622332 None:intergenic 45.0%
! GGCTTCTCTAATGTGGATTG+TGG - chr3_2:38622368-38622387 Msa0405040:intron 45.0%
AGAGTGGTCAGTTTCTACTG+AGG + chr3_2:38622395-38622414 None:intergenic 45.0%
! GGTGTGATGTGTGAAGCATT+AGG + chr3_2:38622469-38622488 None:intergenic 45.0%
TGCTTCACACATCACACCAA+AGG - chr3_2:38622471-38622490 Msa0405040:intron 45.0%
TCTTTGTTCCCATCTGTCCA+AGG + chr3_2:38622497-38622516 None:intergenic 45.0%
! GTTCGATGTGATGGAGTGTA+AGG - chr3_2:38623029-38623048 Msa0405040:intron 45.0%
TCGAAAGGGAGTAGCGAAAT+CGG - chr3_2:38623100-38623119 Msa0405040:intron 45.0%
CCTAGCAAAGTCCCAAAAAC+AGG + chr3_2:38623580-38623599 None:intergenic 45.0%
!!! CCTGTTTTTGGGACTTTGCT+AGG - chr3_2:38623577-38623596 Msa0405040:CDS 45.0%
TACTATGTTGCTGGGACTGT+GGG - chr3_2:38623943-38623962 Msa0405040:intron 45.0%
! TGTGGTTCTATCCCCATTAC+AGG + chr3_2:38623982-38624001 None:intergenic 45.0%
GATGCTCTCTGTTGAAGCTT+TGG + chr3_2:38624007-38624026 None:intergenic 45.0%
GAGCATCTACAATGCTGCAT+TGG - chr3_2:38624020-38624039 Msa0405040:intron 45.0%
! TACAATGCTGCATTGGCACT+TGG - chr3_2:38624027-38624046 Msa0405040:intron 45.0%
AGTGCTTGGTATGGAAAGTG+TGG + chr3_2:38624189-38624208 None:intergenic 45.0%
TCTAGCACAAGTGCTTGGTA+TGG + chr3_2:38624198-38624217 None:intergenic 45.0%
ACATGTCTAGCACAAGTGCT+TGG + chr3_2:38624203-38624222 None:intergenic 45.0%
AAGCACTTGTGCTAGACATG+TGG - chr3_2:38624202-38624221 Msa0405040:intron 45.0%
CTAGCACTATAAGACGACCA+TGG + chr3_2:38624377-38624396 None:intergenic 45.0%
GTACCTTCCGCAAGATGAAT+TGG - chr3_2:38624409-38624428 Msa0405040:intron 45.0%
GCTTGTGCCAATTCATCTTG+CGG + chr3_2:38624419-38624438 None:intergenic 45.0%
CAAGATGAATTGGCACAAGC+TGG - chr3_2:38624419-38624438 Msa0405040:intron 45.0%
AGCTCAGTTCAGCAAGTAGA+TGG - chr3_2:38624558-38624577 Msa0405040:CDS 45.0%
AGCAAGTAGATGGCCTGTTT+GGG - chr3_2:38624568-38624587 Msa0405040:CDS 45.0%
AACAGCAAAGATGCCCAAAC+AGG + chr3_2:38624584-38624603 None:intergenic 45.0%
!! GGGCATCTTTGCTGTTGTAT+AGG - chr3_2:38624588-38624607 Msa0405040:CDS 45.0%
! TTCACCAAACGGGCTTATGT+AGG - chr3_2:38624650-38624669 Msa0405040:CDS 45.0%
! GTTGCTATTCCAAGAGCAAC+AGG + chr3_2:38624701-38624720 None:intergenic 45.0%
GCTCTTGGAATAGCAACGTT+TGG - chr3_2:38624704-38624723 Msa0405040:CDS 45.0%
! CTCTCCTCTGAGGATCTTGT+AGG + chr3_2:38621265-38621284 None:intergenic 50.0%
CTACAAGATCCTCAGAGGAG+AGG - chr3_2:38621263-38621282 Msa0405040:CDS 50.0%
TTCATACACCCTCTCCTCTG+AGG + chr3_2:38621275-38621294 None:intergenic 50.0%
! AGAGGAGAGGGTGTATGAAG+TGG - chr3_2:38621276-38621295 Msa0405040:CDS 50.0%
ACACATCACACCAAAGGCCT+TGG - chr3_2:38622477-38622496 Msa0405040:intron 50.0%
ACCAAAGGCCTTGGACAGAT+GGG - chr3_2:38622486-38622505 Msa0405040:intron 50.0%
CGAAAGGGAGTAGCGAAATC+GGG - chr3_2:38623101-38623120 Msa0405040:intron 50.0%
CATGATTGAAGGGATGAGGC+TGG - chr3_2:38623870-38623889 Msa0405040:intron 50.0%
CTACTATGTTGCTGGGACTG+TGG - chr3_2:38623942-38623961 Msa0405040:intron 50.0%
GTGCCAATTCATCTTGCGGA+AGG + chr3_2:38624415-38624434 None:intergenic 50.0%
GAGGCAGAGTAACCGACAAA+TGG - chr3_2:38624465-38624484 Msa0405040:CDS 50.0%
CAGCAAGTAGATGGCCTGTT+TGG - chr3_2:38624567-38624586 Msa0405040:CDS 50.0%
! CTCTCCTCTGAGGATCTTGT+AGG + chr3_2:38621265-38621284 None:intergenic 50.0%
CTACAAGATCCTCAGAGGAG+AGG - chr3_2:38621263-38621282 Msa0405040:CDS 50.0%
TTCATACACCCTCTCCTCTG+AGG + chr3_2:38621275-38621294 None:intergenic 50.0%
! AGAGGAGAGGGTGTATGAAG+TGG - chr3_2:38621276-38621295 Msa0405040:CDS 50.0%
ACACATCACACCAAAGGCCT+TGG - chr3_2:38622477-38622496 Msa0405040:intron 50.0%
ACCAAAGGCCTTGGACAGAT+GGG - chr3_2:38622486-38622505 Msa0405040:intron 50.0%
CGAAAGGGAGTAGCGAAATC+GGG - chr3_2:38623101-38623120 Msa0405040:intron 50.0%
CATGATTGAAGGGATGAGGC+TGG - chr3_2:38623870-38623889 Msa0405040:intron 50.0%
CTACTATGTTGCTGGGACTG+TGG - chr3_2:38623942-38623961 Msa0405040:intron 50.0%
GTGCCAATTCATCTTGCGGA+AGG + chr3_2:38624415-38624434 None:intergenic 50.0%
GAGGCAGAGTAACCGACAAA+TGG - chr3_2:38624465-38624484 Msa0405040:CDS 50.0%
CAGCAAGTAGATGGCCTGTT+TGG - chr3_2:38624567-38624586 Msa0405040:CDS 50.0%
GAAGCAAGCAGCCCTAGTGA+AGG - chr3_2:38621303-38621322 Msa0405040:CDS 55.0%
CACCAAAGGCCTTGGACAGA+TGG - chr3_2:38622485-38622504 Msa0405040:intron 55.0%
TCCCATCTGTCCAAGGCCTT+TGG + chr3_2:38622490-38622509 None:intergenic 55.0%
GAAGCAAGCAGCCCTAGTGA+AGG - chr3_2:38621303-38621322 Msa0405040:CDS 55.0%
CACCAAAGGCCTTGGACAGA+TGG - chr3_2:38622485-38622504 Msa0405040:intron 55.0%
TCCCATCTGTCCAAGGCCTT+TGG + chr3_2:38622490-38622509 None:intergenic 55.0%
TGGGACTCACACCCACTTGC+AGG - chr3_2:38622986-38623005 Msa0405040:intron 60.0%
TGGGACTCACACCCACTTGC+AGG - chr3_2:38622986-38623005 Msa0405040:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 38620897 38625001 38620897 ID=Msa0405040;Name=Msa0405040
chr3_2 mRNA 38620897 38625001 38620897 ID=Msa0405040-mRNA-1;Parent=Msa0405040;Name=Msa0405040-mRNA-1;_AED=0.02;_eAED=0.02;_QI=215|1|1|1|1|1|5|241|395
chr3_2 exon 38620897 38621507 38620897 ID=Msa0405040-mRNA-1:exon:7655;Parent=Msa0405040-mRNA-1
chr3_2 exon 38621804 38622039 38621804 ID=Msa0405040-mRNA-1:exon:7654;Parent=Msa0405040-mRNA-1
chr3_2 exon 38623295 38623467 38623295 ID=Msa0405040-mRNA-1:exon:7653;Parent=Msa0405040-mRNA-1
chr3_2 exon 38623571 38623621 38623571 ID=Msa0405040-mRNA-1:exon:7652;Parent=Msa0405040-mRNA-1
chr3_2 exon 38624429 38625001 38624429 ID=Msa0405040-mRNA-1:exon:7651;Parent=Msa0405040-mRNA-1
chr3_2 five_prime_UTR 38624787 38625001 38624787 ID=Msa0405040-mRNA-1:five_prime_utr;Parent=Msa0405040-mRNA-1
chr3_2 CDS 38624429 38624786 38624429 ID=Msa0405040-mRNA-1:cds;Parent=Msa0405040-mRNA-1
chr3_2 CDS 38623571 38623621 38623571 ID=Msa0405040-mRNA-1:cds;Parent=Msa0405040-mRNA-1
chr3_2 CDS 38623295 38623467 38623295 ID=Msa0405040-mRNA-1:cds;Parent=Msa0405040-mRNA-1
chr3_2 CDS 38621804 38622039 38621804 ID=Msa0405040-mRNA-1:cds;Parent=Msa0405040-mRNA-1
chr3_2 CDS 38621138 38621507 38621138 ID=Msa0405040-mRNA-1:cds;Parent=Msa0405040-mRNA-1
chr3_2 three_prime_UTR 38620897 38621137 38620897 ID=Msa0405040-mRNA-1:three_prime_utr;Parent=Msa0405040-mRNA-1
Gene Sequence

>Msa0405040

ATGTCTGGTGTTCTTCTTTGGGTGAATTGTGGACTCAAAGAGAATGCCATTTCCTTAATGGGTCTTGGAGGAAAAGATGTAAGAACTCAAAGGAGGTTTAGACATTGTTCTGGAATTAGCTTTGCTAGCTTTTCAAGTGCAATTGTTGAACCTACAAGATCCTCAGAGGAGAGGGTGTATGAAGTGGTGTTGAAGCAAGCAGCCCTAGTGAAGGAACAAAGAAAAGATATTAAAAAGAGAGGTTTGAATTTGGATGATAAGCCTATTGAAGGTGATTTCACCAATGGGGAACTTTTGAGTTCTGCTTATGATAGATGTGGTGATGTATGTGCTGAGTATGCAAAGACATTTTATTTAGGCACACAATTGATGACTCAAGAGAGAAGAAAAGCCATATGGGCCATTTACGTGTGGTGCAGAAGAACAGATGAGTTAGTGGATGGTCCTAATGCTTCACACATCACACCAAAGGCCTTGGACAGATGGGAACAAAGATTAACTGATGTTTTTGAAGGACGTCCTTATGATATGTATGATGCTGCACTTTCAGATACAGTTACAAAGTACCCTGTTGATATACAGCCATTTAAAGACATGATTGAAGGGATGAGGCTGGACCTGAGAAAATCAAGATACAATAACTTTGATGAACTATACCTATATTGCTACTATGTTGCTGGGACTGTGGGCCTTATGAGTGTTCCTGTAATGGGGATAGAACCACAATCCAAAGCTTCAACAGAGAGCATCTACAATGCTGCATTGGCACTTGGCATTGCTAATCAACTTACCAACATACTTAGAGACGTTGGAGAAGATGCTAGAAGAGGAAGAGTGTACCTTCCGCAAGATGAATTGGCACAAGCTGGCCTATCAGATGATGACATTTTTCGAGGCAGAGTAACCGACAAATGGCGCAATTTCATGAAGGGTCAAATAAAGAGAGCAAGGATGTTTTTTGATGAGGCAGAGAAGGGAGTTTCAGAGCTCAGTTCAGCAAGTAGATGGCCTGTTTGGGCATCTTTGCTGTTGTATAGGCAGATATTAGATTCTATTGAAGCTAATGACTATAATAACTTCACCAAACGGGCTTATGTAGGAAAAGCTAAAAAGCTCTTATCACTTCCTGTTGCTCTTGGAATAGCAACGTTTGGCCCACAAAAGTTAACCAAAATGACTACAAGATGA

Protein sequence

>Msa0405040

MSGVLLWVNCGLKENAISLMGLGGKDVRTQRRFRHCSGISFASFSSAIVEPTRSSEERVYEVVLKQAALVKEQRKDIKKRGLNLDDKPIEGDFTNGELLSSAYDRCGDVCAEYAKTFYLGTQLMTQERRKAIWAIYVWCRRTDELVDGPNASHITPKALDRWEQRLTDVFEGRPYDMYDAALSDTVTKYPVDIQPFKDMIEGMRLDLRKSRYNNFDELYLYCYYVAGTVGLMSVPVMGIEPQSKASTESIYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDDDIFRGRVTDKWRNFMKGQIKRARMFFDEAEKGVSELSSASRWPVWASLLLYRQILDSIEANDYNNFTKRAYVGKAKKLLSLPVALGIATFGPQKLTKMTTR*