Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469850 | XP_003602033.1 | 83.392 | 283 | 11 | 3 | 1 | 248 | 6 | 287 | 9.75e-155 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469850 | G7J4X1 | 83.392 | 283 | 11 | 3 | 1 | 248 | 6 | 287 | 4.66e-155 | 441 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0140110 | Msa0469850 | 0.814312 | 1.642886e-51 | -8.615850e-47 |
| Msa0194480 | Msa0469850 | 0.824753 | 6.805456e-54 | -8.615850e-47 |
| Msa0201500 | Msa0469850 | 0.809817 | 1.568862e-50 | -8.615850e-47 |
| Msa0231980 | Msa0469850 | 0.821437 | 4.039293e-53 | -8.615850e-47 |
| Msa0232050 | Msa0469850 | 0.823186 | 1.586582e-53 | -8.615850e-47 |
| Msa0376300 | Msa0469850 | 0.806890 | 6.603782e-50 | -8.615850e-47 |
| Msa0376310 | Msa0469850 | 0.810538 | 1.096521e-50 | -8.615850e-47 |
| Msa0415430 | Msa0469850 | 0.813494 | 2.487601e-51 | -8.615850e-47 |
| Msa0469850 | Msa0485850 | 0.810270 | 1.252921e-50 | -8.615850e-47 |
| Msa0469850 | Msa0524500 | 0.803723 | 3.041704e-49 | -8.615850e-47 |
| Msa0469850 | Msa0650190 | 0.824814 | 6.581216e-54 | -8.615850e-47 |
| Msa0469850 | Msa0713820 | 0.836216 | 1.065514e-56 | -8.615850e-47 |
| Msa0469850 | Msa0756060 | 0.833947 | 3.979957e-56 | -8.615850e-47 |
| Msa0469850 | Msa0771280 | 0.801227 | 9.944318e-49 | -8.615850e-47 |
| Msa0469850 | Msa0797750 | 0.806007 | 1.013870e-49 | -8.615850e-47 |
| Msa0469850 | Msa0801110 | 0.816204 | 6.239297e-52 | -8.615850e-47 |
| Msa0469850 | Msa0808080 | 0.801985 | 6.951859e-49 | -8.615850e-47 |
| Msa0469850 | Msa0833310 | 0.811010 | 8.670017e-51 | -8.615850e-47 |
| Msa0469850 | Msa0835280 | 0.827392 | 1.604273e-54 | -8.615850e-47 |
| Msa0469850 | Msa0849030 | 0.811216 | 7.823767e-51 | -8.615850e-47 |
| Msa0469850 | Msa0947800 | 0.809786 | 1.592525e-50 | -8.615850e-47 |
| Msa0469850 | Msa1023180 | 0.803629 | 3.182142e-49 | -8.615850e-47 |
| Msa0469850 | Msa1043050 | 0.805402 | 1.358067e-49 | -8.615850e-47 |
| Msa0469850 | Msa1060220 | 0.815662 | 8.241348e-52 | -8.615850e-47 |
| Msa0469850 | Msa1081930 | 0.806571 | 7.710838e-50 | -8.615850e-47 |
| Msa0469850 | Msa1150710 | 0.809242 | 2.084074e-50 | -8.615850e-47 |
| Msa0469850 | Msa1174040 | 0.812158 | 4.880112e-51 | -8.615850e-47 |
| Msa0469850 | Msa1250530 | 0.800318 | 1.524707e-48 | -8.615850e-47 |
| Msa0469850 | Msa1368120 | 0.800883 | 1.169179e-48 | -8.615850e-47 |
| Msa0244160 | Msa0469850 | 0.800152 | 1.648216e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469850 | MtrunA17_Chr3g0124721 | 83.392 | 283 | 11 | 3 | 1 | 248 | 6 | 287 | 8.97e-159 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0469850 | AT1G21790.1 | 59.790 | 286 | 71 | 4 | 2 | 248 | 8 | 288 | 4.24e-116 | 334 |
Find 64 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAAGGATGCTCACAAATT+TGG | 0.191248 | 3_3:-71835002 | Msa0469850:CDS |
| CTGGCTCTGTTTGGCATGGC+TGG | 0.219114 | 3_3:-71834960 | Msa0469850:CDS |
| TGTCTAAGTGTTACATTATA+AGG | 0.229453 | 3_3:+71834615 | None:intergenic |
| CGCGGTTGAGCTATTCTTCT+TGG | 0.262347 | 3_3:-71836948 | Msa0469850:CDS |
| AAGCAAGAGTGAAGCAAATA+AGG | 0.291250 | 3_3:+71835442 | None:intergenic |
| CGCAGATAAGAGTGAGAATA+AGG | 0.297124 | 3_3:+71835394 | None:intergenic |
| TGTCTAAGTGCTACATTATA+AGG | 0.304625 | 3_3:+71834720 | None:intergenic |
| AGTTAGAATGGTTTCTGAAT+TGG | 0.333137 | 3_3:-71835079 | Msa0469850:CDS |
| CGCAGTTGGTTGAAGGTACT+TGG | 0.348261 | 3_3:-71835587 | Msa0469850:intron |
| CTTCATTACCGTTTATATAG+TGG | 0.352549 | 3_3:-71835501 | Msa0469850:CDS |
| AGATGATGCAGAAGGATAGA+AGG | 0.368489 | 3_3:+71835471 | None:intergenic |
| GGATAAGGGTGTTGGATGTT+TGG | 0.368947 | 3_3:+71836831 | None:intergenic |
| TCTTGGCAACTCTCATTCTC+TGG | 0.369484 | 3_3:-71836931 | Msa0469850:CDS |
| AAGAGGAGAAGAAACGGATA+AGG | 0.410157 | 3_3:+71836816 | None:intergenic |
| AATATTCTCAACATTGGTCT+TGG | 0.415865 | 3_3:-71834933 | Msa0469850:CDS |
| AGTGAGAATAAGGTAGTTGA+TGG | 0.418257 | 3_3:+71835404 | None:intergenic |
| CATCTTTCTGCATGTGAGAA+AGG | 0.421567 | 3_3:-71835147 | Msa0469850:CDS |
| GAATTGGACCACCTTCTTTG+TGG | 0.431001 | 3_3:-71835063 | Msa0469850:CDS |
| GAGTTACCACTGGCTCTGTT+TGG | 0.431537 | 3_3:-71834969 | Msa0469850:CDS |
| TGGCTCTGTTTGGCATGGCT+GGG | 0.443083 | 3_3:-71834959 | Msa0469850:CDS |
| GCGTTATTGTTAAGTTAGAA+TGG | 0.457315 | 3_3:-71835091 | Msa0469850:CDS |
| GGATCAAACCACTATATAAA+CGG | 0.467090 | 3_3:+71835493 | None:intergenic |
| TTTGGTGTGTGAGAAGAATC+TGG | 0.478114 | 3_3:+71836891 | None:intergenic |
| GTTGGATGTTTGGTAAAAGA+AGG | 0.479443 | 3_3:+71836841 | None:intergenic |
| GCTCCTTGCATCGCGAATGC+CGG | 0.485343 | 3_3:+71835112 | None:intergenic |
| AGAGGAGAAGAAACGGATAA+GGG | 0.493108 | 3_3:+71836817 | None:intergenic |
| CTTTCTCACATGCAGAAAGA+TGG | 0.493157 | 3_3:+71835148 | None:intergenic |
| TGATATAGAGAAGTTGTGTT+TGG | 0.494987 | 3_3:+71836873 | None:intergenic |
| TGGTTGAAGGTACTTGGCCA+TGG | 0.506876 | 3_3:-71835581 | Msa0469850:intron |
| GAAGAAACGGATAAGGGTGT+TGG | 0.514439 | 3_3:+71836823 | None:intergenic |
| ACCACTGGCTCTGTTTGGCA+TGG | 0.525327 | 3_3:-71834964 | Msa0469850:CDS |
| TTGAAGGAGATGGAGGAAGG+TGG | 0.536920 | 3_3:-71836980 | None:intergenic |
| AGATGGAGGAAGGTGGAAAA+CGG | 0.539247 | 3_3:-71836973 | Msa0469850:CDS |
| TCTCAACATTGGTCTTGGCA+TGG | 0.539727 | 3_3:-71834928 | Msa0469850:CDS |
| GGACCACCTTCTTTGTGGCA+AGG | 0.543909 | 3_3:-71835058 | Msa0469850:CDS |
| TGGCCGGCATTCGCGATGCA+AGG | 0.549710 | 3_3:-71835115 | Msa0469850:CDS |
| AGAAAGGTGAGACGAATGGC+CGG | 0.554709 | 3_3:-71835131 | Msa0469850:CDS |
| CACACACCTTGCCACAAAGA+AGG | 0.554711 | 3_3:+71835052 | None:intergenic |
| GATGCTCACAAATTTGGAAA+GGG | 0.564979 | 3_3:-71834996 | Msa0469850:CDS |
| GGTTGAAGGTACTTGGCCAT+GGG | 0.567709 | 3_3:-71835580 | Msa0469850:intron |
| GGATGCTCACAAATTTGGAA+AGG | 0.568150 | 3_3:-71834997 | Msa0469850:CDS |
| AATTTGAAGGAGATGGAGGA+AGG | 0.573008 | 3_3:-71836983 | None:intergenic |
| GTTACTTTGCATATGATCAG+TGG | 0.584062 | 3_3:-71835530 | Msa0469850:CDS |
| TTACTTTGCATATGATCAGT+GGG | 0.586308 | 3_3:-71835529 | Msa0469850:CDS |
| GGAGAACGAGATGATGCAGA+AGG | 0.592742 | 3_3:+71835463 | None:intergenic |
| AAAGGGTGTGGAGTTACCAC+TGG | 0.594748 | 3_3:-71834979 | Msa0469850:CDS |
| ATCATATGCAAAGTAACCGC+AGG | 0.594905 | 3_3:+71835536 | None:intergenic |
| CAACTTCTCTATATCATCGC+CGG | 0.599036 | 3_3:-71836866 | Msa0469850:CDS |
| CATCACAGCGAAACTCATCA+AGG | 0.603697 | 3_3:-71835018 | Msa0469850:CDS |
| TATTCTCAGTGAAGCGCGAG+TGG | 0.604695 | 3_3:+71834772 | None:intergenic |
| TCACAAATTTGGAAAGGGTG+TGG | 0.605756 | 3_3:-71834991 | Msa0469850:CDS |
| CACAATGCTTCAAATGCCCA+TGG | 0.606526 | 3_3:+71835564 | None:intergenic |
| GATGATGCAGAAGGATAGAA+GGG | 0.615579 | 3_3:+71835472 | None:intergenic |
| GGGATGAATATTCTCAACAT+TGG | 0.620763 | 3_3:-71834939 | Msa0469850:CDS |
| TGTTTGGTAAAAGAAGGAAC+CGG | 0.629088 | 3_3:+71836847 | None:intergenic |
| ACGGCGGTGTTAACGAAGAG+AGG | 0.635825 | 3_3:+71836773 | None:intergenic |
| AAGAATCTGGAAGGAAACAG+AGG | 0.648409 | 3_3:+71836904 | None:intergenic |
| GCCATGCCAAACAGAGCCAG+TGG | 0.650373 | 3_3:+71834963 | None:intergenic |
| ACACCTTGCCACAAAGAAGG+TGG | 0.663377 | 3_3:+71835055 | None:intergenic |
| GGAAGGTGGAAAACGGAACG+CGG | 0.672189 | 3_3:-71836966 | Msa0469850:CDS |
| TATTCTCACTCTTATCTGCG+AGG | 0.677343 | 3_3:-71835391 | Msa0469850:intron |
| GTGTGTGAGAAGAATCTGGA+AGG | 0.695311 | 3_3:+71836895 | None:intergenic |
| TGTGAGAAAGGTGAGACGAA+TGG | 0.699729 | 3_3:-71835135 | Msa0469850:CDS |
| TATAATGTAACACTTAGACA+AGG | 0.731275 | 3_3:-71834612 | Msa0469850:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTAAAAA+AGG | - | chr3_3:71835171-71835190 | Msa0469850:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTAAAAA+AGG | - | chr3_3:71835171-71835190 | Msa0469850:intron | 0.0% |
| !! | TATAATCCTTTATAAATAAA+GGG | + | chr3_3:71835666-71835685 | None:intergenic | 10.0% |
| !! | TTATAATCCTTTATAAATAA+AGG | + | chr3_3:71835667-71835686 | None:intergenic | 10.0% |
| !! | TATAATCCTTTATAAATAAA+GGG | + | chr3_3:71835666-71835685 | None:intergenic | 10.0% |
| !! | TTATAATCCTTTATAAATAA+AGG | + | chr3_3:71835667-71835686 | None:intergenic | 10.0% |
| !! | AAAAGTAAATTATTCAAACA+GGG | + | chr3_3:71835366-71835385 | None:intergenic | 15.0% |
| !!! | TAAATTTTAATAGTCTTACT+TGG | - | chr3_3:71835684-71835703 | Msa0469850:intron | 15.0% |
| !! | ACAAAAATTAATTATTGCAA+AGG | + | chr3_3:71835796-71835815 | None:intergenic | 15.0% |
| !!! | TTGCAATAATTAATTTTTGT+TGG | - | chr3_3:71835796-71835815 | Msa0469850:intron | 15.0% |
| !! | AAAAGTAAATTATTCAAACA+GGG | + | chr3_3:71835366-71835385 | None:intergenic | 15.0% |
| !!! | TAAATTTTAATAGTCTTACT+TGG | - | chr3_3:71835684-71835703 | Msa0469850:intron | 15.0% |
| !! | ACAAAAATTAATTATTGCAA+AGG | + | chr3_3:71835796-71835815 | None:intergenic | 15.0% |
| !!! | TTGCAATAATTAATTTTTGT+TGG | - | chr3_3:71835796-71835815 | Msa0469850:intron | 15.0% |
| !!! | CCATTTGTTATTATAGAAAT+AGG | + | chr3_3:71834924-71834943 | None:intergenic | 20.0% |
| !!! | CCTATTTCTATAATAACAAA+TGG | - | chr3_3:71834921-71834940 | Msa0469850:CDS | 20.0% |
| !! | ACAATAACTTAAGAAGATTA+AGG | + | chr3_3:71835070-71835089 | None:intergenic | 20.0% |
| !! | CAAAAGTAAATTATTCAAAC+AGG | + | chr3_3:71835367-71835386 | None:intergenic | 20.0% |
| !! | ATTTATACCTTATATACAGA+CGG | - | chr3_3:71835483-71835502 | Msa0469850:CDS | 20.0% |
| !!! | TGTAGATTTGTTTTGAAATT+TGG | + | chr3_3:71835737-71835756 | None:intergenic | 20.0% |
| !!! | TGTTTTGTATTTATTCATTC+TGG | - | chr3_3:71836897-71836916 | Msa0469850:CDS | 20.0% |
| !!! | CCATTTGTTATTATAGAAAT+AGG | + | chr3_3:71834924-71834943 | None:intergenic | 20.0% |
| !!! | CCTATTTCTATAATAACAAA+TGG | - | chr3_3:71834921-71834940 | Msa0469850:CDS | 20.0% |
| !! | ACAATAACTTAAGAAGATTA+AGG | + | chr3_3:71835070-71835089 | None:intergenic | 20.0% |
| !! | CAAAAGTAAATTATTCAAAC+AGG | + | chr3_3:71835367-71835386 | None:intergenic | 20.0% |
| !! | ATTTATACCTTATATACAGA+CGG | - | chr3_3:71835483-71835502 | Msa0469850:CDS | 20.0% |
| !!! | TGTAGATTTGTTTTGAAATT+TGG | + | chr3_3:71835737-71835756 | None:intergenic | 20.0% |
| !!! | TGTTTTGTATTTATTCATTC+TGG | - | chr3_3:71836897-71836916 | Msa0469850:CDS | 20.0% |
| !!! | TTCTCTCATTATTAATTTGC+AGG | - | chr3_3:71834849-71834868 | Msa0469850:exon | 25.0% |
| ! | TAAAGTAAATCATACGCATA+GGG | + | chr3_3:71835028-71835047 | None:intergenic | 25.0% |
| ! | AAAACCTTTATAGCAATTAC+TGG | - | chr3_3:71835320-71835339 | Msa0469850:intron | 25.0% |
| ! | AAACCTTTATAGCAATTACT+GGG | - | chr3_3:71835321-71835340 | Msa0469850:intron | 25.0% |
| !! | TGATTTGTGTTATGTGTAAT+TGG | - | chr3_3:71835435-71835454 | Msa0469850:CDS | 25.0% |
| ! | GATTTGTGTTATGTGTAATT+GGG | - | chr3_3:71835436-71835455 | Msa0469850:CDS | 25.0% |
| ! | TTTATACCTTATATACAGAC+GGG | - | chr3_3:71835484-71835503 | Msa0469850:CDS | 25.0% |
| !! | GTGTATCCCTTTATTTATAA+AGG | - | chr3_3:71835657-71835676 | Msa0469850:intron | 25.0% |
| !! | ATTTTCATCTTGTTCAAACA+GGG | - | chr3_3:71835898-71835917 | Msa0469850:intron | 25.0% |
| ! | ATTAGATAGAACAAAGAAGA+AGG | + | chr3_3:71836189-71836208 | None:intergenic | 25.0% |
| ! | TATACATACACACATTCAAA+GGG | + | chr3_3:71836265-71836284 | None:intergenic | 25.0% |
| ! | ATATACATACACACATTCAA+AGG | + | chr3_3:71836266-71836285 | None:intergenic | 25.0% |
| ! | TGTCTAAGTGTTACATTATA+AGG | + | chr3_3:71836931-71836950 | None:intergenic | 25.0% |
| ! | TATAATGTAACACTTAGACA+AGG | - | chr3_3:71836931-71836950 | Msa0469850:CDS | 25.0% |
| !!! | TTCTCTCATTATTAATTTGC+AGG | - | chr3_3:71834849-71834868 | Msa0469850:exon | 25.0% |
| ! | TAAAGTAAATCATACGCATA+GGG | + | chr3_3:71835028-71835047 | None:intergenic | 25.0% |
| ! | AAAACCTTTATAGCAATTAC+TGG | - | chr3_3:71835320-71835339 | Msa0469850:intron | 25.0% |
| ! | AAACCTTTATAGCAATTACT+GGG | - | chr3_3:71835321-71835340 | Msa0469850:intron | 25.0% |
| !! | TGATTTGTGTTATGTGTAAT+TGG | - | chr3_3:71835435-71835454 | Msa0469850:CDS | 25.0% |
| ! | GATTTGTGTTATGTGTAATT+GGG | - | chr3_3:71835436-71835455 | Msa0469850:CDS | 25.0% |
| ! | TTTATACCTTATATACAGAC+GGG | - | chr3_3:71835484-71835503 | Msa0469850:CDS | 25.0% |
| !! | GTGTATCCCTTTATTTATAA+AGG | - | chr3_3:71835657-71835676 | Msa0469850:intron | 25.0% |
| !! | ATTTTCATCTTGTTCAAACA+GGG | - | chr3_3:71835898-71835917 | Msa0469850:intron | 25.0% |
| ! | ATTAGATAGAACAAAGAAGA+AGG | + | chr3_3:71836189-71836208 | None:intergenic | 25.0% |
| ! | TATACATACACACATTCAAA+GGG | + | chr3_3:71836265-71836284 | None:intergenic | 25.0% |
| ! | ATATACATACACACATTCAA+AGG | + | chr3_3:71836266-71836285 | None:intergenic | 25.0% |
| ! | TGTCTAAGTGTTACATTATA+AGG | + | chr3_3:71836931-71836950 | None:intergenic | 25.0% |
| ! | TATAATGTAACACTTAGACA+AGG | - | chr3_3:71836931-71836950 | Msa0469850:CDS | 25.0% |
| TGATATAGAGAAGTTGTGTT+TGG | + | chr3_3:71834673-71834692 | None:intergenic | 30.0% | |
| !! | ATTTTGAAGAGGAGAAGAAA+CGG | + | chr3_3:71834736-71834755 | None:intergenic | 30.0% |
| CTAAAGTAAATCATACGCAT+AGG | + | chr3_3:71835029-71835048 | None:intergenic | 30.0% | |
| ! | AACAAGCAAATTGACCATTT+TGG | + | chr3_3:71835120-71835139 | None:intergenic | 30.0% |
| AACCTTTATAGCAATTACTG+GGG | - | chr3_3:71835322-71835341 | Msa0469850:intron | 30.0% | |
| TGTCAAAGATATATCCATCA+AGG | - | chr3_3:71835385-71835404 | Msa0469850:intron | 30.0% | |
| ATGCAAAACAAAACATGATG+AGG | + | chr3_3:71835411-71835430 | None:intergenic | 30.0% | |
| !!! | CATCATGTTTTGTTTTGCAT+TGG | - | chr3_3:71835411-71835430 | Msa0469850:CDS | 30.0% |
| AATTGGGCCTAATTTACTAT+TGG | - | chr3_3:71835452-71835471 | Msa0469850:CDS | 30.0% | |
| CCTAAGAAAATATTAAGAGG+AGG | + | chr3_3:71835552-71835571 | None:intergenic | 30.0% | |
| ! | CCTCCTCTTAATATTTTCTT+AGG | - | chr3_3:71835549-71835568 | Msa0469850:CDS | 30.0% |
| CCTCCTAAGAAAATATTAAG+AGG | + | chr3_3:71835555-71835574 | None:intergenic | 30.0% | |
| ! | CCTCTTAATATTTTCTTAGG+AGG | - | chr3_3:71835552-71835571 | Msa0469850:CDS | 30.0% |
| ATTGTTAGGGATGATGATAT+CGG | + | chr3_3:71835611-71835630 | None:intergenic | 30.0% | |
| TTTGAGGAGGATCATATAAA+AGG | - | chr3_3:71835630-71835649 | Msa0469850:intron | 30.0% | |
| ! | GATTTTCATCTTGTTCAAAC+AGG | - | chr3_3:71835897-71835916 | Msa0469850:intron | 30.0% |
| ! | TTTTCATCTTGTTCAAACAG+GGG | - | chr3_3:71835899-71835918 | Msa0469850:intron | 30.0% |
| TTACTTTGCATATGATCAGT+GGG | - | chr3_3:71836014-71836033 | Msa0469850:intron | 30.0% | |
| CTTCATTACCGTTTATATAG+TGG | - | chr3_3:71836042-71836061 | Msa0469850:intron | 30.0% | |
| GGATCAAACCACTATATAAA+CGG | + | chr3_3:71836053-71836072 | None:intergenic | 30.0% | |
| ACTATAGTATCAGAACTAAG+AGG | - | chr3_3:71836231-71836250 | Msa0469850:intron | 30.0% | |
| GCGTTATTGTTAAGTTAGAA+TGG | - | chr3_3:71836452-71836471 | Msa0469850:intron | 30.0% | |
| AGTTAGAATGGTTTCTGAAT+TGG | - | chr3_3:71836464-71836483 | Msa0469850:intron | 30.0% | |
| ! | AATATTCTCAACATTGGTCT+TGG | - | chr3_3:71836610-71836629 | Msa0469850:intron | 30.0% |
| !! | TAAAAGCTTTTAAGAGAGAG+AGG | - | chr3_3:71836644-71836663 | Msa0469850:intron | 30.0% |
| TGTCTAAGTGCTACATTATA+AGG | + | chr3_3:71836826-71836845 | None:intergenic | 30.0% | |
| TGATATAGAGAAGTTGTGTT+TGG | + | chr3_3:71834673-71834692 | None:intergenic | 30.0% | |
| !! | ATTTTGAAGAGGAGAAGAAA+CGG | + | chr3_3:71834736-71834755 | None:intergenic | 30.0% |
| CTAAAGTAAATCATACGCAT+AGG | + | chr3_3:71835029-71835048 | None:intergenic | 30.0% | |
| ! | AACAAGCAAATTGACCATTT+TGG | + | chr3_3:71835120-71835139 | None:intergenic | 30.0% |
| AACCTTTATAGCAATTACTG+GGG | - | chr3_3:71835322-71835341 | Msa0469850:intron | 30.0% | |
| TGTCAAAGATATATCCATCA+AGG | - | chr3_3:71835385-71835404 | Msa0469850:intron | 30.0% | |
| ATGCAAAACAAAACATGATG+AGG | + | chr3_3:71835411-71835430 | None:intergenic | 30.0% | |
| !!! | CATCATGTTTTGTTTTGCAT+TGG | - | chr3_3:71835411-71835430 | Msa0469850:CDS | 30.0% |
| AATTGGGCCTAATTTACTAT+TGG | - | chr3_3:71835452-71835471 | Msa0469850:CDS | 30.0% | |
| CCTAAGAAAATATTAAGAGG+AGG | + | chr3_3:71835552-71835571 | None:intergenic | 30.0% | |
| ! | CCTCCTCTTAATATTTTCTT+AGG | - | chr3_3:71835549-71835568 | Msa0469850:CDS | 30.0% |
| CCTCCTAAGAAAATATTAAG+AGG | + | chr3_3:71835555-71835574 | None:intergenic | 30.0% | |
| ! | CCTCTTAATATTTTCTTAGG+AGG | - | chr3_3:71835552-71835571 | Msa0469850:CDS | 30.0% |
| ATTGTTAGGGATGATGATAT+CGG | + | chr3_3:71835611-71835630 | None:intergenic | 30.0% | |
| TTTGAGGAGGATCATATAAA+AGG | - | chr3_3:71835630-71835649 | Msa0469850:intron | 30.0% | |
| ! | GATTTTCATCTTGTTCAAAC+AGG | - | chr3_3:71835897-71835916 | Msa0469850:intron | 30.0% |
| ! | TTTTCATCTTGTTCAAACAG+GGG | - | chr3_3:71835899-71835918 | Msa0469850:intron | 30.0% |
| TTACTTTGCATATGATCAGT+GGG | - | chr3_3:71836014-71836033 | Msa0469850:intron | 30.0% | |
| CTTCATTACCGTTTATATAG+TGG | - | chr3_3:71836042-71836061 | Msa0469850:intron | 30.0% | |
| GGATCAAACCACTATATAAA+CGG | + | chr3_3:71836053-71836072 | None:intergenic | 30.0% | |
| ACTATAGTATCAGAACTAAG+AGG | - | chr3_3:71836231-71836250 | Msa0469850:intron | 30.0% | |
| GCGTTATTGTTAAGTTAGAA+TGG | - | chr3_3:71836452-71836471 | Msa0469850:intron | 30.0% | |
| AGTTAGAATGGTTTCTGAAT+TGG | - | chr3_3:71836464-71836483 | Msa0469850:intron | 30.0% | |
| ! | AATATTCTCAACATTGGTCT+TGG | - | chr3_3:71836610-71836629 | Msa0469850:intron | 30.0% |
| !! | TAAAAGCTTTTAAGAGAGAG+AGG | - | chr3_3:71836644-71836663 | Msa0469850:intron | 30.0% |
| TGTCTAAGTGCTACATTATA+AGG | + | chr3_3:71836826-71836845 | None:intergenic | 30.0% | |
| TGTTTGGTAAAAGAAGGAAC+CGG | + | chr3_3:71834699-71834718 | None:intergenic | 35.0% | |
| GTTGGATGTTTGGTAAAAGA+AGG | + | chr3_3:71834705-71834724 | None:intergenic | 35.0% | |
| !! | AGAGAGTGATGATTTTGAAG+AGG | + | chr3_3:71834747-71834766 | None:intergenic | 35.0% |
| TCTGCAACATTGCAATATCA+TGG | - | chr3_3:71835194-71835213 | Msa0469850:intron | 35.0% | |
| TGTGATATTGTGGAGAATAG+TGG | + | chr3_3:71835277-71835296 | None:intergenic | 35.0% | |
| ACTATTCTCCACAATATCAC+AGG | - | chr3_3:71835276-71835295 | Msa0469850:intron | 35.0% | |
| TACCCCAGTAATTGCTATAA+AGG | + | chr3_3:71835327-71835346 | None:intergenic | 35.0% | |
| GAGTGCACCAATAGTAAATT+AGG | + | chr3_3:71835462-71835481 | None:intergenic | 35.0% | |
| TCATCATCCCTAACAATTTG+AGG | - | chr3_3:71835614-71835633 | Msa0469850:intron | 35.0% | |
| TGATCCTCCTCAAATTGTTA+GGG | + | chr3_3:71835624-71835643 | None:intergenic | 35.0% | |
| ATGATCCTCCTCAAATTGTT+AGG | + | chr3_3:71835625-71835644 | None:intergenic | 35.0% | |
| TCATTATCCTCTCTTCTCAT+CGG | - | chr3_3:71835843-71835862 | Msa0469850:intron | 35.0% | |
| ! | GTTACTTTGCATATGATCAG+TGG | - | chr3_3:71836013-71836032 | Msa0469850:intron | 35.0% |
| AAGCAAGAGTGAAGCAAATA+AGG | + | chr3_3:71836104-71836123 | None:intergenic | 35.0% | |
| AGTGAGAATAAGGTAGTTGA+TGG | + | chr3_3:71836142-71836161 | None:intergenic | 35.0% | |
| TAAATACGACTTCTCTGTGA+TGG | - | chr3_3:71836360-71836379 | Msa0469850:intron | 35.0% | |
| ATCAAGGATGCTCACAAATT+TGG | - | chr3_3:71836541-71836560 | Msa0469850:intron | 35.0% | |
| GATGCTCACAAATTTGGAAA+GGG | - | chr3_3:71836547-71836566 | Msa0469850:intron | 35.0% | |
| GGGATGAATATTCTCAACAT+TGG | - | chr3_3:71836604-71836623 | Msa0469850:intron | 35.0% | |
| TGTTTGGTAAAAGAAGGAAC+CGG | + | chr3_3:71834699-71834718 | None:intergenic | 35.0% | |
| GTTGGATGTTTGGTAAAAGA+AGG | + | chr3_3:71834705-71834724 | None:intergenic | 35.0% | |
| !! | AGAGAGTGATGATTTTGAAG+AGG | + | chr3_3:71834747-71834766 | None:intergenic | 35.0% |
| TCTGCAACATTGCAATATCA+TGG | - | chr3_3:71835194-71835213 | Msa0469850:intron | 35.0% | |
| TGTGATATTGTGGAGAATAG+TGG | + | chr3_3:71835277-71835296 | None:intergenic | 35.0% | |
| ACTATTCTCCACAATATCAC+AGG | - | chr3_3:71835276-71835295 | Msa0469850:intron | 35.0% | |
| TACCCCAGTAATTGCTATAA+AGG | + | chr3_3:71835327-71835346 | None:intergenic | 35.0% | |
| GAGTGCACCAATAGTAAATT+AGG | + | chr3_3:71835462-71835481 | None:intergenic | 35.0% | |
| TCATCATCCCTAACAATTTG+AGG | - | chr3_3:71835614-71835633 | Msa0469850:intron | 35.0% | |
| TGATCCTCCTCAAATTGTTA+GGG | + | chr3_3:71835624-71835643 | None:intergenic | 35.0% | |
| ATGATCCTCCTCAAATTGTT+AGG | + | chr3_3:71835625-71835644 | None:intergenic | 35.0% | |
| TCATTATCCTCTCTTCTCAT+CGG | - | chr3_3:71835843-71835862 | Msa0469850:intron | 35.0% | |
| ! | GTTACTTTGCATATGATCAG+TGG | - | chr3_3:71836013-71836032 | Msa0469850:intron | 35.0% |
| AAGCAAGAGTGAAGCAAATA+AGG | + | chr3_3:71836104-71836123 | None:intergenic | 35.0% | |
| AGTGAGAATAAGGTAGTTGA+TGG | + | chr3_3:71836142-71836161 | None:intergenic | 35.0% | |
| TAAATACGACTTCTCTGTGA+TGG | - | chr3_3:71836360-71836379 | Msa0469850:intron | 35.0% | |
| ATCAAGGATGCTCACAAATT+TGG | - | chr3_3:71836541-71836560 | Msa0469850:intron | 35.0% | |
| GATGCTCACAAATTTGGAAA+GGG | - | chr3_3:71836547-71836566 | Msa0469850:intron | 35.0% | |
| GGGATGAATATTCTCAACAT+TGG | - | chr3_3:71836604-71836623 | Msa0469850:intron | 35.0% | |
| AAGAATCTGGAAGGAAACAG+AGG | + | chr3_3:71834642-71834661 | None:intergenic | 40.0% | |
| ! | TTTGGTGTGTGAGAAGAATC+TGG | + | chr3_3:71834655-71834674 | None:intergenic | 40.0% |
| CAACTTCTCTATATCATCGC+CGG | - | chr3_3:71834677-71834696 | Msa0469850:three_prime_UTR | 40.0% | |
| AGAGGAGAAGAAACGGATAA+GGG | + | chr3_3:71834729-71834748 | None:intergenic | 40.0% | |
| AAGAGGAGAAGAAACGGATA+AGG | + | chr3_3:71834730-71834749 | None:intergenic | 40.0% | |
| ! | TTTGCGCTTGATGACCAAAA+TGG | - | chr3_3:71835103-71835122 | Msa0469850:CDS | 40.0% |
| ATGTCTGTGTGATTGCAATG+CGG | - | chr3_3:71835229-71835248 | Msa0469850:intron | 40.0% | |
| TCTCCACAATATCACAGGAT+TGG | - | chr3_3:71835281-71835300 | Msa0469850:intron | 40.0% | |
| CTCCACAATATCACAGGATT+GGG | - | chr3_3:71835282-71835301 | Msa0469850:intron | 40.0% | |
| AAAACATGATGAGGCCTTGA+TGG | + | chr3_3:71835402-71835421 | None:intergenic | 40.0% | |
| ACGGAATAAACTCTGCTTTG+AGG | + | chr3_3:71835586-71835605 | None:intergenic | 40.0% | |
| AGGGATGATGATATCGGAAA+CGG | + | chr3_3:71835605-71835624 | None:intergenic | 40.0% | |
| TCATCCCTAACAATTTGAGG+AGG | - | chr3_3:71835617-71835636 | Msa0469850:intron | 40.0% | |
| TTCAAACAGGGGTTGAGTAA+TGG | - | chr3_3:71835910-71835929 | Msa0469850:intron | 40.0% | |
| AATGTTTGATCACTCGCAGT+TGG | - | chr3_3:71835942-71835961 | Msa0469850:intron | 40.0% | |
| !!! | GAAGCATTGTGTTTTTCCTG+CGG | - | chr3_3:71835991-71836010 | Msa0469850:intron | 40.0% |
| ATCATATGCAAAGTAACCGC+AGG | + | chr3_3:71836010-71836029 | None:intergenic | 40.0% | |
| GATGATGCAGAAGGATAGAA+GGG | + | chr3_3:71836074-71836093 | None:intergenic | 40.0% | |
| AGATGATGCAGAAGGATAGA+AGG | + | chr3_3:71836075-71836094 | None:intergenic | 40.0% | |
| CGCAGATAAGAGTGAGAATA+AGG | + | chr3_3:71836152-71836171 | None:intergenic | 40.0% | |
| TATTCTCACTCTTATCTGCG+AGG | - | chr3_3:71836152-71836171 | Msa0469850:intron | 40.0% | |
| ACACACATTCAAAGGGAGAA+GGG | + | chr3_3:71836258-71836277 | None:intergenic | 40.0% | |
| TACACACATTCAAAGGGAGA+AGG | + | chr3_3:71836259-71836278 | None:intergenic | 40.0% | |
| CTTTCTCACATGCAGAAAGA+TGG | + | chr3_3:71836398-71836417 | None:intergenic | 40.0% | |
| CATCTTTCTGCATGTGAGAA+AGG | - | chr3_3:71836396-71836415 | Msa0469850:intron | 40.0% | |
| GGATGCTCACAAATTTGGAA+AGG | - | chr3_3:71836546-71836565 | Msa0469850:intron | 40.0% | |
| TCACAAATTTGGAAAGGGTG+TGG | - | chr3_3:71836552-71836571 | Msa0469850:intron | 40.0% | |
| !! | AAGCTTTTAAGAGAGAGAGG+AGG | - | chr3_3:71836647-71836666 | Msa0469850:intron | 40.0% |
| AAGAATCTGGAAGGAAACAG+AGG | + | chr3_3:71834642-71834661 | None:intergenic | 40.0% | |
| ! | TTTGGTGTGTGAGAAGAATC+TGG | + | chr3_3:71834655-71834674 | None:intergenic | 40.0% |
| CAACTTCTCTATATCATCGC+CGG | - | chr3_3:71834677-71834696 | Msa0469850:three_prime_UTR | 40.0% | |
| AGAGGAGAAGAAACGGATAA+GGG | + | chr3_3:71834729-71834748 | None:intergenic | 40.0% | |
| AAGAGGAGAAGAAACGGATA+AGG | + | chr3_3:71834730-71834749 | None:intergenic | 40.0% | |
| ! | TTTGCGCTTGATGACCAAAA+TGG | - | chr3_3:71835103-71835122 | Msa0469850:CDS | 40.0% |
| ATGTCTGTGTGATTGCAATG+CGG | - | chr3_3:71835229-71835248 | Msa0469850:intron | 40.0% | |
| TCTCCACAATATCACAGGAT+TGG | - | chr3_3:71835281-71835300 | Msa0469850:intron | 40.0% | |
| CTCCACAATATCACAGGATT+GGG | - | chr3_3:71835282-71835301 | Msa0469850:intron | 40.0% | |
| AAAACATGATGAGGCCTTGA+TGG | + | chr3_3:71835402-71835421 | None:intergenic | 40.0% | |
| ACGGAATAAACTCTGCTTTG+AGG | + | chr3_3:71835586-71835605 | None:intergenic | 40.0% | |
| AGGGATGATGATATCGGAAA+CGG | + | chr3_3:71835605-71835624 | None:intergenic | 40.0% | |
| TCATCCCTAACAATTTGAGG+AGG | - | chr3_3:71835617-71835636 | Msa0469850:intron | 40.0% | |
| TTCAAACAGGGGTTGAGTAA+TGG | - | chr3_3:71835910-71835929 | Msa0469850:intron | 40.0% | |
| AATGTTTGATCACTCGCAGT+TGG | - | chr3_3:71835942-71835961 | Msa0469850:intron | 40.0% | |
| !!! | GAAGCATTGTGTTTTTCCTG+CGG | - | chr3_3:71835991-71836010 | Msa0469850:intron | 40.0% |
| ATCATATGCAAAGTAACCGC+AGG | + | chr3_3:71836010-71836029 | None:intergenic | 40.0% | |
| GATGATGCAGAAGGATAGAA+GGG | + | chr3_3:71836074-71836093 | None:intergenic | 40.0% | |
| AGATGATGCAGAAGGATAGA+AGG | + | chr3_3:71836075-71836094 | None:intergenic | 40.0% | |
| CGCAGATAAGAGTGAGAATA+AGG | + | chr3_3:71836152-71836171 | None:intergenic | 40.0% | |
| TATTCTCACTCTTATCTGCG+AGG | - | chr3_3:71836152-71836171 | Msa0469850:intron | 40.0% | |
| ACACACATTCAAAGGGAGAA+GGG | + | chr3_3:71836258-71836277 | None:intergenic | 40.0% | |
| TACACACATTCAAAGGGAGA+AGG | + | chr3_3:71836259-71836278 | None:intergenic | 40.0% | |
| CTTTCTCACATGCAGAAAGA+TGG | + | chr3_3:71836398-71836417 | None:intergenic | 40.0% | |
| CATCTTTCTGCATGTGAGAA+AGG | - | chr3_3:71836396-71836415 | Msa0469850:intron | 40.0% | |
| GGATGCTCACAAATTTGGAA+AGG | - | chr3_3:71836546-71836565 | Msa0469850:intron | 40.0% | |
| TCACAAATTTGGAAAGGGTG+TGG | - | chr3_3:71836552-71836571 | Msa0469850:intron | 40.0% | |
| !! | AAGCTTTTAAGAGAGAGAGG+AGG | - | chr3_3:71836647-71836666 | Msa0469850:intron | 40.0% |
| TCTTGGCAACTCTCATTCTC+TGG | - | chr3_3:71834612-71834631 | Msa0469850:three_prime_UTR | 45.0% | |
| GTGTGTGAGAAGAATCTGGA+AGG | + | chr3_3:71834651-71834670 | None:intergenic | 45.0% | |
| !! | GGATAAGGGTGTTGGATGTT+TGG | + | chr3_3:71834715-71834734 | None:intergenic | 45.0% |
| ! | GAAGAAACGGATAAGGGTGT+TGG | + | chr3_3:71834723-71834742 | None:intergenic | 45.0% |
| GACGGAGTGGATAAGTGATA+CGG | + | chr3_3:71834792-71834811 | None:intergenic | 45.0% | |
| GAAAGAGAGAGAACCTGAAG+AGG | + | chr3_3:71834822-71834841 | None:intergenic | 45.0% | |
| ! | TCATACGCATAGGGCTTGTT+TGG | + | chr3_3:71835019-71835038 | None:intergenic | 45.0% |
| GTCCCAATCCTGTGATATTG+TGG | + | chr3_3:71835287-71835306 | None:intergenic | 45.0% | |
| ACTGGGGTAAGTAGAGAATC+AGG | - | chr3_3:71835338-71835357 | Msa0469850:intron | 45.0% | |
| CTGGGGTAAGTAGAGAATCA+GGG | - | chr3_3:71835339-71835358 | Msa0469850:intron | 45.0% | |
| TGGGGTAAGTAGAGAATCAG+GGG | - | chr3_3:71835340-71835359 | Msa0469850:intron | 45.0% | |
| ACGCTACCCGTCTGTATATA+AGG | + | chr3_3:71835493-71835512 | None:intergenic | 45.0% | |
| !! | GGGTTGAGTAATGGATTCAG+CGG | - | chr3_3:71835919-71835938 | Msa0469850:intron | 45.0% |
| CACAATGCTTCAAATGCCCA+TGG | + | chr3_3:71835982-71836001 | None:intergenic | 45.0% | |
| TGTGAGAAAGGTGAGACGAA+TGG | - | chr3_3:71836408-71836427 | Msa0469850:intron | 45.0% | |
| GAATTGGACCACCTTCTTTG+TGG | - | chr3_3:71836480-71836499 | Msa0469850:intron | 45.0% | |
| CATCACAGCGAAACTCATCA+AGG | - | chr3_3:71836525-71836544 | Msa0469850:intron | 45.0% | |
| !! | TCTCAACATTGGTCTTGGCA+TGG | - | chr3_3:71836615-71836634 | Msa0469850:intron | 45.0% |
| TCTTGGCAACTCTCATTCTC+TGG | - | chr3_3:71834612-71834631 | Msa0469850:three_prime_UTR | 45.0% | |
| GTGTGTGAGAAGAATCTGGA+AGG | + | chr3_3:71834651-71834670 | None:intergenic | 45.0% | |
| !! | GGATAAGGGTGTTGGATGTT+TGG | + | chr3_3:71834715-71834734 | None:intergenic | 45.0% |
| ! | GAAGAAACGGATAAGGGTGT+TGG | + | chr3_3:71834723-71834742 | None:intergenic | 45.0% |
| GACGGAGTGGATAAGTGATA+CGG | + | chr3_3:71834792-71834811 | None:intergenic | 45.0% | |
| GAAAGAGAGAGAACCTGAAG+AGG | + | chr3_3:71834822-71834841 | None:intergenic | 45.0% | |
| ! | TCATACGCATAGGGCTTGTT+TGG | + | chr3_3:71835019-71835038 | None:intergenic | 45.0% |
| GTCCCAATCCTGTGATATTG+TGG | + | chr3_3:71835287-71835306 | None:intergenic | 45.0% | |
| ACTGGGGTAAGTAGAGAATC+AGG | - | chr3_3:71835338-71835357 | Msa0469850:intron | 45.0% | |
| CTGGGGTAAGTAGAGAATCA+GGG | - | chr3_3:71835339-71835358 | Msa0469850:intron | 45.0% | |
| TGGGGTAAGTAGAGAATCAG+GGG | - | chr3_3:71835340-71835359 | Msa0469850:intron | 45.0% | |
| ACGCTACCCGTCTGTATATA+AGG | + | chr3_3:71835493-71835512 | None:intergenic | 45.0% | |
| !! | GGGTTGAGTAATGGATTCAG+CGG | - | chr3_3:71835919-71835938 | Msa0469850:intron | 45.0% |
| CACAATGCTTCAAATGCCCA+TGG | + | chr3_3:71835982-71836001 | None:intergenic | 45.0% | |
| TGTGAGAAAGGTGAGACGAA+TGG | - | chr3_3:71836408-71836427 | Msa0469850:intron | 45.0% | |
| GAATTGGACCACCTTCTTTG+TGG | - | chr3_3:71836480-71836499 | Msa0469850:intron | 45.0% | |
| CATCACAGCGAAACTCATCA+AGG | - | chr3_3:71836525-71836544 | Msa0469850:intron | 45.0% | |
| !! | TCTCAACATTGGTCTTGGCA+TGG | - | chr3_3:71836615-71836634 | Msa0469850:intron | 45.0% |
| CGCGGTTGAGCTATTCTTCT+TGG | - | chr3_3:71834595-71834614 | Msa0469850:three_prime_UTR | 50.0% | |
| GGAGTGGATAAGTGATACGG+CGG | + | chr3_3:71834789-71834808 | None:intergenic | 50.0% | |
| AGAGAGAGAACCTGAAGAGG+AGG | + | chr3_3:71834819-71834838 | None:intergenic | 50.0% | |
| GGTCACGATTGAGACTGCAT+TGG | - | chr3_3:71835250-71835269 | Msa0469850:intron | 50.0% | |
| CAAGACTCCGATGAGAAGAG+AGG | + | chr3_3:71835853-71835872 | None:intergenic | 50.0% | |
| GATCACTCGCAGTTGGTTGA+AGG | - | chr3_3:71835949-71835968 | Msa0469850:intron | 50.0% | |
| !! | CGCAGTTGGTTGAAGGTACT+TGG | - | chr3_3:71835956-71835975 | Msa0469850:intron | 50.0% |
| !! | TGGTTGAAGGTACTTGGCCA+TGG | - | chr3_3:71835962-71835981 | Msa0469850:intron | 50.0% |
| !! | GGTTGAAGGTACTTGGCCAT+GGG | - | chr3_3:71835963-71835982 | Msa0469850:intron | 50.0% |
| GGAGAACGAGATGATGCAGA+AGG | + | chr3_3:71836083-71836102 | None:intergenic | 50.0% | |
| AGAAAGGTGAGACGAATGGC+CGG | - | chr3_3:71836412-71836431 | Msa0469850:intron | 50.0% | |
| ACACCTTGCCACAAAGAAGG+TGG | + | chr3_3:71836491-71836510 | None:intergenic | 50.0% | |
| CACACACCTTGCCACAAAGA+AGG | + | chr3_3:71836494-71836513 | None:intergenic | 50.0% | |
| ! | AAAGGGTGTGGAGTTACCAC+TGG | - | chr3_3:71836564-71836583 | Msa0469850:intron | 50.0% |
| !! | GAGTTACCACTGGCTCTGTT+TGG | - | chr3_3:71836574-71836593 | Msa0469850:intron | 50.0% |
| TATTCTCAGTGAAGCGCGAG+TGG | + | chr3_3:71836774-71836793 | None:intergenic | 50.0% | |
| CGCGGTTGAGCTATTCTTCT+TGG | - | chr3_3:71834595-71834614 | Msa0469850:three_prime_UTR | 50.0% | |
| GGAGTGGATAAGTGATACGG+CGG | + | chr3_3:71834789-71834808 | None:intergenic | 50.0% | |
| AGAGAGAGAACCTGAAGAGG+AGG | + | chr3_3:71834819-71834838 | None:intergenic | 50.0% | |
| GGTCACGATTGAGACTGCAT+TGG | - | chr3_3:71835250-71835269 | Msa0469850:intron | 50.0% | |
| CAAGACTCCGATGAGAAGAG+AGG | + | chr3_3:71835853-71835872 | None:intergenic | 50.0% | |
| GATCACTCGCAGTTGGTTGA+AGG | - | chr3_3:71835949-71835968 | Msa0469850:intron | 50.0% | |
| !! | CGCAGTTGGTTGAAGGTACT+TGG | - | chr3_3:71835956-71835975 | Msa0469850:intron | 50.0% |
| !! | TGGTTGAAGGTACTTGGCCA+TGG | - | chr3_3:71835962-71835981 | Msa0469850:intron | 50.0% |
| !! | GGTTGAAGGTACTTGGCCAT+GGG | - | chr3_3:71835963-71835982 | Msa0469850:intron | 50.0% |
| GGAGAACGAGATGATGCAGA+AGG | + | chr3_3:71836083-71836102 | None:intergenic | 50.0% | |
| AGAAAGGTGAGACGAATGGC+CGG | - | chr3_3:71836412-71836431 | Msa0469850:intron | 50.0% | |
| ACACCTTGCCACAAAGAAGG+TGG | + | chr3_3:71836491-71836510 | None:intergenic | 50.0% | |
| CACACACCTTGCCACAAAGA+AGG | + | chr3_3:71836494-71836513 | None:intergenic | 50.0% | |
| ! | AAAGGGTGTGGAGTTACCAC+TGG | - | chr3_3:71836564-71836583 | Msa0469850:intron | 50.0% |
| !! | GAGTTACCACTGGCTCTGTT+TGG | - | chr3_3:71836574-71836593 | Msa0469850:intron | 50.0% |
| TATTCTCAGTGAAGCGCGAG+TGG | + | chr3_3:71836774-71836793 | None:intergenic | 50.0% | |
| GGAAGGTGGAAAACGGAACG+CGG | - | chr3_3:71834577-71834596 | Msa0469850:three_prime_UTR | 55.0% | |
| ! | ACGGCGGTGTTAACGAAGAG+AGG | + | chr3_3:71834773-71834792 | None:intergenic | 55.0% |
| ACCTGAAGAGGAGGTGACGA+CGG | + | chr3_3:71834810-71834829 | None:intergenic | 55.0% | |
| GGACCACCTTCTTTGTGGCA+AGG | - | chr3_3:71836485-71836504 | Msa0469850:intron | 55.0% | |
| !! | ACCACTGGCTCTGTTTGGCA+TGG | - | chr3_3:71836579-71836598 | Msa0469850:intron | 55.0% |
| ! | TGGCTCTGTTTGGCATGGCT+GGG | - | chr3_3:71836584-71836603 | Msa0469850:intron | 55.0% |
| GGAAGGTGGAAAACGGAACG+CGG | - | chr3_3:71834577-71834596 | Msa0469850:three_prime_UTR | 55.0% | |
| ! | ACGGCGGTGTTAACGAAGAG+AGG | + | chr3_3:71834773-71834792 | None:intergenic | 55.0% |
| ACCTGAAGAGGAGGTGACGA+CGG | + | chr3_3:71834810-71834829 | None:intergenic | 55.0% | |
| GGACCACCTTCTTTGTGGCA+AGG | - | chr3_3:71836485-71836504 | Msa0469850:intron | 55.0% | |
| !! | ACCACTGGCTCTGTTTGGCA+TGG | - | chr3_3:71836579-71836598 | Msa0469850:intron | 55.0% |
| ! | TGGCTCTGTTTGGCATGGCT+GGG | - | chr3_3:71836584-71836603 | Msa0469850:intron | 55.0% |
| AAGAGGAGGTGACGACGGAG+TGG | + | chr3_3:71834805-71834824 | None:intergenic | 60.0% | |
| TCCGTCGTCACCTCCTCTTC+AGG | - | chr3_3:71834806-71834825 | Msa0469850:three_prime_UTR | 60.0% | |
| GCTCCTTGCATCGCGAATGC+CGG | + | chr3_3:71836434-71836453 | None:intergenic | 60.0% | |
| GCCATGCCAAACAGAGCCAG+TGG | + | chr3_3:71836583-71836602 | None:intergenic | 60.0% | |
| !! | CTGGCTCTGTTTGGCATGGC+TGG | - | chr3_3:71836583-71836602 | Msa0469850:intron | 60.0% |
| AAGAGGAGGTGACGACGGAG+TGG | + | chr3_3:71834805-71834824 | None:intergenic | 60.0% | |
| TCCGTCGTCACCTCCTCTTC+AGG | - | chr3_3:71834806-71834825 | Msa0469850:three_prime_UTR | 60.0% | |
| GCTCCTTGCATCGCGAATGC+CGG | + | chr3_3:71836434-71836453 | None:intergenic | 60.0% | |
| GCCATGCCAAACAGAGCCAG+TGG | + | chr3_3:71836583-71836602 | None:intergenic | 60.0% | |
| !! | CTGGCTCTGTTTGGCATGGC+TGG | - | chr3_3:71836583-71836602 | Msa0469850:intron | 60.0% |
| TGGCCGGCATTCGCGATGCA+AGG | - | chr3_3:71836428-71836447 | Msa0469850:intron | 65.0% | |
| TGGCCGGCATTCGCGATGCA+AGG | - | chr3_3:71836428-71836447 | Msa0469850:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 71834572 | 71836993 | 71834572 | ID=Msa0469850;Name=Msa0469850 |
| chr3_3 | mRNA | 71834572 | 71836993 | 71834572 | ID=Msa0469850-mRNA-1;Parent=Msa0469850;Name=Msa0469850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.33|0.25|1|0.33|0.25|4|288|248 |
| chr3_3 | exon | 71834572 | 71835177 | 71834572 | ID=Msa0469850-mRNA-1:exon:17717;Parent=Msa0469850-mRNA-1 |
| chr3_3 | exon | 71835392 | 71835594 | 71835392 | ID=Msa0469850-mRNA-1:exon:17716;Parent=Msa0469850-mRNA-1 |
| chr3_3 | exon | 71835640 | 71835646 | 71835640 | ID=Msa0469850-mRNA-1:exon:17715;Parent=Msa0469850-mRNA-1 |
| chr3_3 | exon | 71836775 | 71836993 | 71836775 | ID=Msa0469850-mRNA-1:exon:17714;Parent=Msa0469850-mRNA-1 |
| chr3_3 | CDS | 71836775 | 71836993 | 71836775 | ID=Msa0469850-mRNA-1:cds;Parent=Msa0469850-mRNA-1 |
| chr3_3 | CDS | 71835640 | 71835646 | 71835640 | ID=Msa0469850-mRNA-1:cds;Parent=Msa0469850-mRNA-1 |
| chr3_3 | CDS | 71835392 | 71835594 | 71835392 | ID=Msa0469850-mRNA-1:cds;Parent=Msa0469850-mRNA-1 |
| chr3_3 | CDS | 71834860 | 71835177 | 71834860 | ID=Msa0469850-mRNA-1:cds;Parent=Msa0469850-mRNA-1 |
| chr3_3 | three_prime_UTR | 71834572 | 71834859 | 71834572 | ID=Msa0469850-mRNA-1:three_prime_utr;Parent=Msa0469850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
