Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415430 | XP_003600586.1 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.46e-42 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415430 | G7J780 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 1.17e-42 | 142 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0415430 | 0.831383 | 1.722446e-55 | -8.615850e-47 |
| Msa0004840 | Msa0415430 | 0.811125 | 8.186642e-51 | -8.615850e-47 |
| Msa0008090 | Msa0415430 | 0.823744 | 1.174531e-53 | -8.615850e-47 |
| Msa0020390 | Msa0415430 | 0.848882 | 4.615517e-60 | -8.615850e-47 |
| Msa0023000 | Msa0415430 | 0.812151 | 4.898554e-51 | -8.615850e-47 |
| Msa0029260 | Msa0415430 | 0.803994 | 2.671851e-49 | -8.615850e-47 |
| Msa0037840 | Msa0415430 | 0.807682 | 4.486876e-50 | -8.615850e-47 |
| Msa0038870 | Msa0415430 | 0.810060 | 1.390621e-50 | -8.615850e-47 |
| Msa0043980 | Msa0415430 | 0.810803 | 9.611335e-51 | -8.615850e-47 |
| Msa0046740 | Msa0415430 | 0.814910 | 1.210940e-51 | -8.615850e-47 |
| Msa0047980 | Msa0415430 | 0.812138 | 4.929166e-51 | -8.615850e-47 |
| Msa0056470 | Msa0415430 | 0.821564 | 3.776034e-53 | -8.615850e-47 |
| Msa0064350 | Msa0415430 | 0.822786 | 1.966479e-53 | -8.615850e-47 |
| Msa0065950 | Msa0415430 | 0.807505 | 4.892801e-50 | -8.615850e-47 |
| Msa0068020 | Msa0415430 | 0.824912 | 6.242760e-54 | -8.615850e-47 |
| Msa0084940 | Msa0415430 | 0.815134 | 1.080156e-51 | -8.615850e-47 |
| Msa0090520 | Msa0415430 | 0.800444 | 1.437269e-48 | -8.615850e-47 |
| Msa0090550 | Msa0415430 | 0.812603 | 3.901870e-51 | -8.615850e-47 |
| Msa0091610 | Msa0415430 | 0.815692 | 8.114426e-52 | -8.615850e-47 |
| Msa0093010 | Msa0415430 | 0.818875 | 1.560025e-52 | -8.615850e-47 |
| Msa0093420 | Msa0415430 | 0.808370 | 3.202502e-50 | -8.615850e-47 |
| Msa0096980 | Msa0415430 | 0.819862 | 9.291574e-53 | -8.615850e-47 |
| Msa0100740 | Msa0415430 | 0.801256 | 9.808719e-49 | -8.615850e-47 |
| Msa0115370 | Msa0415430 | 0.803088 | 4.119562e-49 | -8.615850e-47 |
| Msa0115390 | Msa0415430 | 0.805846 | 1.096036e-49 | -8.615850e-47 |
| Msa0115990 | Msa0415430 | 0.829461 | 5.082579e-55 | -8.615850e-47 |
| Msa0118540 | Msa0415430 | 0.808851 | 2.527750e-50 | -8.615850e-47 |
| Msa0121820 | Msa0415430 | 0.801205 | 1.005030e-48 | -8.615850e-47 |
| Msa0123560 | Msa0415430 | 0.812248 | 4.665174e-51 | -8.615850e-47 |
| Msa0125450 | Msa0415430 | 0.818012 | 2.447020e-52 | -8.615850e-47 |
| Msa0125540 | Msa0415430 | 0.821434 | 4.045721e-53 | -8.615850e-47 |
| Msa0137820 | Msa0415430 | 0.805162 | 1.524956e-49 | -8.615850e-47 |
| Msa0137990 | Msa0415430 | 0.800006 | 1.764879e-48 | -8.615850e-47 |
| Msa0140110 | Msa0415430 | 0.998940 | 1.004044e-282 | -8.615850e-47 |
| Msa0140650 | Msa0415430 | 0.834825 | 2.395246e-56 | -8.615850e-47 |
| Msa0140820 | Msa0415430 | 0.813976 | 1.948895e-51 | -8.615850e-47 |
| Msa0145010 | Msa0415430 | 0.817415 | 3.336594e-52 | -8.615850e-47 |
| Msa0149190 | Msa0415430 | 0.800081 | 1.703352e-48 | -8.615850e-47 |
| Msa0159420 | Msa0415430 | 0.813031 | 3.144114e-51 | -8.615850e-47 |
| Msa0162130 | Msa0415430 | 0.809995 | 1.436293e-50 | -8.615850e-47 |
| Msa0169300 | Msa0415430 | 0.803161 | 3.978687e-49 | -8.615850e-47 |
| Msa0173070 | Msa0415430 | 0.802209 | 6.254758e-49 | -8.615850e-47 |
| Msa0183460 | Msa0415430 | 0.812655 | 3.801696e-51 | -8.615850e-47 |
| Msa0183870 | Msa0415430 | 0.817178 | 3.772209e-52 | -8.615850e-47 |
| Msa0183900 | Msa0415430 | 0.801540 | 8.582610e-49 | -8.615850e-47 |
| Msa0189520 | Msa0415430 | 0.834604 | 2.723376e-56 | -8.615850e-47 |
| Msa0190120 | Msa0415430 | 0.827669 | 1.377332e-54 | -8.615850e-47 |
| Msa0190590 | Msa0415430 | 0.804327 | 2.278336e-49 | -8.615850e-47 |
| Msa0191050 | Msa0415430 | 0.810942 | 8.970064e-51 | -8.615850e-47 |
| Msa0191440 | Msa0415430 | 0.814632 | 1.395721e-51 | -8.615850e-47 |
| Msa0194480 | Msa0415430 | 0.854506 | 1.176155e-61 | -8.615850e-47 |
| Msa0199690 | Msa0415430 | 0.829552 | 4.830368e-55 | -8.615850e-47 |
| Msa0199880 | Msa0415430 | 0.809133 | 2.200222e-50 | -8.615850e-47 |
| Msa0209080 | Msa0415430 | 0.802032 | 6.799490e-49 | -8.615850e-47 |
| Msa0209350 | Msa0415430 | 0.811710 | 6.110088e-51 | -8.615850e-47 |
| Msa0209500 | Msa0415430 | 0.803662 | 3.132376e-49 | -8.615850e-47 |
| Msa0220250 | Msa0415430 | 0.809583 | 1.761259e-50 | -8.615850e-47 |
| Msa0231790 | Msa0415430 | 0.831481 | 1.629478e-55 | -8.615850e-47 |
| Msa0231980 | Msa0415430 | 0.817966 | 2.507006e-52 | -8.615850e-47 |
| Msa0232050 | Msa0415430 | 0.818523 | 1.874869e-52 | -8.615850e-47 |
| Msa0233350 | Msa0415430 | 0.814558 | 1.449595e-51 | -8.615850e-47 |
| Msa0233370 | Msa0415430 | 0.807564 | 4.753293e-50 | -8.615850e-47 |
| Msa0236270 | Msa0415430 | 0.832293 | 1.026638e-55 | -8.615850e-47 |
| Msa0366890 | Msa0415430 | 0.803602 | 3.224158e-49 | -8.615850e-47 |
| Msa0375980 | Msa0415430 | 0.826308 | 2.912783e-54 | -8.615850e-47 |
| Msa0376300 | Msa0415430 | 0.810258 | 1.260632e-50 | -8.615850e-47 |
| Msa0376310 | Msa0415430 | 0.811139 | 8.127395e-51 | -8.615850e-47 |
| Msa0376690 | Msa0415430 | 0.824544 | 7.621812e-54 | -8.615850e-47 |
| Msa0376910 | Msa0415430 | 0.801530 | 8.619734e-49 | -8.615850e-47 |
| Msa0378490 | Msa0415430 | 0.821509 | 3.887246e-53 | -8.615850e-47 |
| Msa0380300 | Msa0415430 | 0.833729 | 4.511447e-56 | -8.615850e-47 |
| Msa0385500 | Msa0415430 | 0.829147 | 6.056297e-55 | -8.615850e-47 |
| Msa0391690 | Msa0415430 | 0.837878 | 4.008761e-57 | -8.615850e-47 |
| Msa0414800 | Msa0415430 | 0.811148 | 8.091703e-51 | -8.615850e-47 |
| Msa0415430 | Msa0433360 | 0.808823 | 2.562476e-50 | -8.615850e-47 |
| Msa0415430 | Msa0442200 | 0.801240 | 9.884691e-49 | -8.615850e-47 |
| Msa0415430 | Msa0453350 | 0.811796 | 5.853448e-51 | -8.615850e-47 |
| Msa0415430 | Msa0458060 | 0.804303 | 2.304635e-49 | -8.615850e-47 |
| Msa0415430 | Msa0460100 | 0.803576 | 3.263180e-49 | -8.615850e-47 |
| Msa0415430 | Msa0469850 | 0.813494 | 2.487601e-51 | -8.615850e-47 |
| Msa0415430 | Msa0471440 | 0.804516 | 2.080770e-49 | -8.615850e-47 |
| Msa0415430 | Msa0471590 | 0.842317 | 2.783597e-58 | -8.615850e-47 |
| Msa0415430 | Msa0477080 | 0.817889 | 2.609293e-52 | -8.615850e-47 |
| Msa0415430 | Msa0479270 | 0.816479 | 5.412971e-52 | -8.615850e-47 |
| Msa0415430 | Msa0481480 | 0.814143 | 1.789902e-51 | -8.615850e-47 |
| Msa0415430 | Msa0481810 | 0.850146 | 2.050377e-60 | -8.615850e-47 |
| Msa0415430 | Msa0484740 | 0.813655 | 2.293726e-51 | -8.615850e-47 |
| Msa0415430 | Msa0485850 | 0.994195 | 2.608408e-205 | -8.615850e-47 |
| Msa0415430 | Msa0489610 | 0.808321 | 3.280679e-50 | -8.615850e-47 |
| Msa0415430 | Msa0520790 | 0.818245 | 2.168235e-52 | -8.615850e-47 |
| Msa0415430 | Msa0521050 | 0.801463 | 8.900023e-49 | -8.615850e-47 |
| Msa0415430 | Msa0524500 | 0.817993 | 2.471195e-52 | -8.615850e-47 |
| Msa0415430 | Msa0531530 | 0.805950 | 1.041958e-49 | -8.615850e-47 |
| Msa0415430 | Msa0534410 | 0.811940 | 5.444155e-51 | -8.615850e-47 |
| Msa0415430 | Msa0534900 | 0.818951 | 1.498882e-52 | -8.615850e-47 |
| Msa0415430 | Msa0542290 | 0.808031 | 3.781069e-50 | -8.615850e-47 |
| Msa0415430 | Msa0542560 | 0.829056 | 6.370738e-55 | -8.615850e-47 |
| Msa0415430 | Msa0544840 | 0.806050 | 9.929382e-50 | -8.615850e-47 |
| Msa0415430 | Msa0547160 | 0.843018 | 1.813920e-58 | -8.615850e-47 |
| Msa0415430 | Msa0548240 | 0.810467 | 1.136241e-50 | -8.615850e-47 |
| Msa0415430 | Msa0552810 | 0.822124 | 2.801577e-53 | -8.615850e-47 |
| Msa0415430 | Msa0556060 | 0.820867 | 5.465189e-53 | -8.615850e-47 |
| Msa0415430 | Msa0557480 | 0.820499 | 6.639855e-53 | -8.615850e-47 |
| Msa0415430 | Msa0580280 | 0.814374 | 1.591903e-51 | -8.615850e-47 |
| Msa0415430 | Msa0581070 | 0.808113 | 3.632375e-50 | -8.615850e-47 |
| Msa0415430 | Msa0581110 | 0.829218 | 5.822381e-55 | -8.615850e-47 |
| Msa0415430 | Msa0588240 | 0.806698 | 7.249442e-50 | -8.615850e-47 |
| Msa0415430 | Msa0588260 | 0.846371 | 2.264660e-59 | -8.615850e-47 |
| Msa0415430 | Msa0589190 | 0.829517 | 4.924384e-55 | -8.615850e-47 |
| Msa0415430 | Msa0590650 | 0.830297 | 3.179970e-55 | -8.615850e-47 |
| Msa0415430 | Msa0600450 | 0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0415430 | Msa0603540 | 0.803865 | 2.842536e-49 | -8.615850e-47 |
| Msa0415430 | Msa0603570 | 0.843005 | 1.827980e-58 | -8.615850e-47 |
| Msa0415430 | Msa0604290 | 0.826859 | 2.152964e-54 | -8.615850e-47 |
| Msa0415430 | Msa0608710 | 0.816083 | 6.639807e-52 | -8.615850e-47 |
| Msa0415430 | Msa0610390 | 0.811864 | 5.657153e-51 | -8.615850e-47 |
| Msa0415430 | Msa0630950 | 0.803257 | 3.800535e-49 | -8.615850e-47 |
| Msa0415430 | Msa0631350 | 0.824861 | 6.416746e-54 | -8.615850e-47 |
| Msa0415430 | Msa0642970 | 0.829240 | 5.749108e-55 | -8.615850e-47 |
| Msa0415430 | Msa0647490 | 0.800051 | 1.727623e-48 | -8.615850e-47 |
| Msa0415430 | Msa0650190 | 0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa0415430 | Msa0650920 | 0.815345 | 9.696664e-52 | -8.615850e-47 |
| Msa0415430 | Msa0657120 | 0.800093 | 1.694314e-48 | -8.615850e-47 |
| Msa0415430 | Msa0661300 | 0.830084 | 3.582855e-55 | -8.615850e-47 |
| Msa0415430 | Msa0662630 | 0.833734 | 4.498658e-56 | -8.615850e-47 |
| Msa0415430 | Msa0663900 | 0.810684 | 1.019771e-50 | -8.615850e-47 |
| Msa0415430 | Msa0666270 | 0.811869 | 5.642987e-51 | -8.615850e-47 |
| Msa0415430 | Msa0673470 | 0.818166 | 2.258843e-52 | -8.615850e-47 |
| Msa0415430 | Msa0679360 | 0.802784 | 4.759627e-49 | -8.615850e-47 |
| Msa0415430 | Msa0682680 | 0.842290 | 2.831046e-58 | -8.615850e-47 |
| Msa0415430 | Msa0687630 | 0.817399 | 3.365134e-52 | -8.615850e-47 |
| Msa0415430 | Msa0689500 | 0.827420 | 1.579729e-54 | -8.615850e-47 |
| Msa0415430 | Msa0692840 | 0.823568 | 1.291644e-53 | -8.615850e-47 |
| Msa0415430 | Msa0692940 | 0.846943 | 1.580497e-59 | -8.615850e-47 |
| Msa0415430 | Msa0697940 | 0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0415430 | Msa0698540 | 0.822506 | 2.284176e-53 | -8.615850e-47 |
| Msa0415430 | Msa0701100 | 0.824896 | 6.296178e-54 | -8.615850e-47 |
| Msa0415430 | Msa0706960 | 0.843160 | 1.662291e-58 | -8.615850e-47 |
| Msa0415430 | Msa0713820 | 0.815059 | 1.122404e-51 | -8.615850e-47 |
| Msa0415430 | Msa0722020 | 0.836285 | 1.023279e-56 | -8.615850e-47 |
| Msa0415430 | Msa0737600 | 0.831284 | 1.820999e-55 | -8.615850e-47 |
| Msa0415430 | Msa0756060 | 0.812706 | 3.704065e-51 | -8.615850e-47 |
| Msa0415430 | Msa0763020 | 0.822715 | 2.042645e-53 | -8.615850e-47 |
| Msa0415430 | Msa0763070 | 0.826304 | 2.919414e-54 | -8.615850e-47 |
| Msa0415430 | Msa0771720 | 0.800809 | 1.210902e-48 | -8.615850e-47 |
| Msa0415430 | Msa0800370 | 0.808604 | 2.854257e-50 | -8.615850e-47 |
| Msa0415430 | Msa0801110 | 0.836103 | 1.138353e-56 | -8.615850e-47 |
| Msa0415430 | Msa0805500 | 0.804403 | 2.196287e-49 | -8.615850e-47 |
| Msa0415430 | Msa0833310 | 0.816603 | 5.077712e-52 | -8.615850e-47 |
| Msa0415430 | Msa0835280 | 0.807794 | 4.246564e-50 | -8.615850e-47 |
| Msa0415430 | Msa0837660 | 0.800122 | 1.671513e-48 | -8.615850e-47 |
| Msa0415430 | Msa0838370 | 0.802220 | 6.221253e-49 | -8.615850e-47 |
| Msa0415430 | Msa0842830 | 0.854877 | 9.182154e-62 | -8.615850e-47 |
| Msa0415430 | Msa0847080 | 0.813854 | 2.073014e-51 | -8.615850e-47 |
| Msa0415430 | Msa0851620 | 0.803127 | 4.043214e-49 | -8.615850e-47 |
| Msa0415430 | Msa0858440 | 0.810521 | 1.106049e-50 | -8.615850e-47 |
| Msa0415430 | Msa0869120 | 0.814475 | 1.511524e-51 | -8.615850e-47 |
| Msa0415430 | Msa0881270 | 0.823398 | 1.415480e-53 | -8.615850e-47 |
| Msa0415430 | Msa0930140 | 0.806585 | 7.658192e-50 | -8.615850e-47 |
| Msa0415430 | Msa0932830 | 0.810582 | 1.072736e-50 | -8.615850e-47 |
| Msa0415430 | Msa0947800 | 0.811379 | 7.211643e-51 | -8.615850e-47 |
| Msa0415430 | Msa0963090 | -0.801811 | 7.551197e-49 | -8.615850e-47 |
| Msa0415430 | Msa0971020 | 0.840092 | 1.070941e-57 | -8.615850e-47 |
| Msa0415430 | Msa0974810 | 0.812160 | 4.874249e-51 | -8.615850e-47 |
| Msa0415430 | Msa1006710 | 0.804897 | 1.732592e-49 | -8.615850e-47 |
| Msa0415430 | Msa1023180 | 0.851753 | 7.226719e-61 | -8.615850e-47 |
| Msa0415430 | Msa1034150 | 0.817075 | 3.979337e-52 | -8.615850e-47 |
| Msa0415430 | Msa1039900 | 0.805715 | 1.167725e-49 | -8.615850e-47 |
| Msa0415430 | Msa1043050 | 0.857510 | 1.553993e-62 | -8.615850e-47 |
| Msa0415430 | Msa1046020 | 0.837073 | 6.445509e-57 | -8.615850e-47 |
| Msa0415430 | Msa1046060 | 0.831540 | 1.575391e-55 | -8.615850e-47 |
| Msa0415430 | Msa1071320 | 0.800532 | 1.378866e-48 | -8.615850e-47 |
| Msa0415430 | Msa1081930 | 0.811749 | 5.991740e-51 | -8.615850e-47 |
| Msa0415430 | Msa1089320 | 0.804031 | 2.625535e-49 | -8.615850e-47 |
| Msa0415430 | Msa1089840 | 0.810212 | 1.289334e-50 | -8.615850e-47 |
| Msa0415430 | Msa1091100 | 0.851674 | 7.610750e-61 | -8.615850e-47 |
| Msa0415430 | Msa1107900 | 0.802891 | 4.523385e-49 | -8.615850e-47 |
| Msa0415430 | Msa1113670 | 0.803939 | 2.743400e-49 | -8.615850e-47 |
| Msa0415430 | Msa1126770 | 0.804192 | 2.430109e-49 | -8.615850e-47 |
| Msa0415430 | Msa1126830 | 0.827929 | 1.192256e-54 | -8.615850e-47 |
| Msa0415430 | Msa1130980 | 0.814745 | 1.317580e-51 | -8.615850e-47 |
| Msa0415430 | Msa1134090 | 0.848786 | 4.909434e-60 | -8.615850e-47 |
| Msa0415430 | Msa1150710 | 0.869255 | 3.552188e-66 | -8.615850e-47 |
| Msa0415430 | Msa1165780 | 0.818723 | 1.689437e-52 | -8.615850e-47 |
| Msa0415430 | Msa1165940 | 0.828891 | 6.984778e-55 | -8.615850e-47 |
| Msa0415430 | Msa1190930 | 0.812481 | 4.148833e-51 | -8.615850e-47 |
| Msa0415430 | Msa1199990 | 0.817762 | 2.787457e-52 | -8.615850e-47 |
| Msa0415430 | Msa1205590 | 0.811699 | 6.144878e-51 | -8.615850e-47 |
| Msa0415430 | Msa1208380 | 0.807282 | 5.455442e-50 | -8.615850e-47 |
| Msa0415430 | Msa1233850 | 0.802560 | 5.294543e-49 | -8.615850e-47 |
| Msa0415430 | Msa1239910 | 0.831553 | 1.564178e-55 | -8.615850e-47 |
| Msa0415430 | Msa1244600 | 0.825610 | 4.267698e-54 | -8.615850e-47 |
| Msa0415430 | Msa1250530 | 0.812314 | 4.511251e-51 | -8.615850e-47 |
| Msa0415430 | Msa1254730 | 0.810102 | 1.362070e-50 | -8.615850e-47 |
| Msa0415430 | Msa1256470 | 0.833009 | 6.822097e-56 | -8.615850e-47 |
| Msa0415430 | Msa1269300 | 0.812900 | 3.358984e-51 | -8.615850e-47 |
| Msa0415430 | Msa1296830 | 0.864846 | 9.059492e-65 | -8.615850e-47 |
| Msa0415430 | Msa1304820 | 0.817325 | 3.497276e-52 | -8.615850e-47 |
| Msa0415430 | Msa1310400 | 0.802486 | 5.484229e-49 | -8.615850e-47 |
| Msa0415430 | Msa1320390 | 0.814957 | 1.182461e-51 | -8.615850e-47 |
| Msa0415430 | Msa1336560 | 0.811521 | 6.716175e-51 | -8.615850e-47 |
| Msa0415430 | Msa1339190 | 0.804630 | 1.969989e-49 | -8.615850e-47 |
| Msa0415430 | Msa1343290 | 0.827439 | 1.563335e-54 | -8.615850e-47 |
| Msa0415430 | Msa1348850 | 0.812781 | 3.566309e-51 | -8.615850e-47 |
| Msa0415430 | Msa1362420 | 0.815671 | 8.204052e-52 | -8.615850e-47 |
| Msa0415430 | Msa1364210 | 0.805919 | 1.057963e-49 | -8.615850e-47 |
| Msa0415430 | Msa1364910 | 0.831213 | 1.896524e-55 | -8.615850e-47 |
| Msa0415430 | Msa1365800 | 0.812224 | 4.722169e-51 | -8.615850e-47 |
| Msa0415430 | Msa1367590 | 0.812052 | 5.145734e-51 | -8.615850e-47 |
| Msa0415430 | Msa1368120 | 0.801003 | 1.105060e-48 | -8.615850e-47 |
| Msa0415430 | Msa1368530 | 0.816530 | 5.274800e-52 | -8.615850e-47 |
| Msa0415430 | Msa1376650 | 0.829623 | 4.640725e-55 | -8.615850e-47 |
| Msa0415430 | Msa1382020 | 0.810011 | 1.424644e-50 | -8.615850e-47 |
| Msa0415430 | Msa1385770 | 0.835048 | 2.105370e-56 | -8.615850e-47 |
| Msa0415430 | Msa1393740 | 0.855519 | 5.975407e-62 | -8.615850e-47 |
| Msa0415430 | Msa1402420 | -0.804002 | 2.661880e-49 | -8.615850e-47 |
| Msa0415430 | Msa1404010 | 0.836287 | 1.022082e-56 | -8.615850e-47 |
| Msa0415430 | Msa1404190 | 0.806040 | 9.977967e-50 | -8.615850e-47 |
| Msa0415430 | Msa1409240 | 0.835172 | 1.958305e-56 | -8.615850e-47 |
| Msa0415430 | Msa1418340 | 0.814919 | 1.205501e-51 | -8.615850e-47 |
| Msa0415430 | Msa1419640 | 0.826548 | 2.554409e-54 | -8.615850e-47 |
| Msa0415430 | Msa1420990 | 0.838191 | 3.329168e-57 | -8.615850e-47 |
| Msa0415430 | Msa1423910 | 0.841737 | 3.963957e-58 | -8.615850e-47 |
| Msa0415430 | Msa1428880 | 0.800974 | 1.120224e-48 | -8.615850e-47 |
| Msa0415430 | Msa1434140 | 0.825813 | 3.819159e-54 | -8.615850e-47 |
| Msa0415430 | Msa1434420 | -0.832038 | 1.187549e-55 | -8.615850e-47 |
| Msa0415430 | Msa1435750 | 0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0415430 | Msa1444740 | 0.801103 | 1.054498e-48 | -8.615850e-47 |
| Msa0415430 | Msa1447890 | 0.836094 | 1.144291e-56 | -8.615850e-47 |
| Msa0415430 | Msa1448620 | 0.800405 | 1.463892e-48 | -8.615850e-47 |
| Msa0415430 | Msa1448630 | 0.850418 | 1.720057e-60 | -8.615850e-47 |
| Msa0415430 | Msa1451560 | 0.824643 | 7.222387e-54 | -8.615850e-47 |
| Msa0415430 | Msa1459960 | 0.801819 | 7.521309e-49 | -8.615850e-47 |
| Msa0415430 | Msa1461280 | 0.830696 | 2.539286e-55 | -8.615850e-47 |
| Msa0415430 | Msa1462290 | 0.801337 | 9.443033e-49 | -8.615850e-47 |
| Msa0243090 | Msa0415430 | 0.813733 | 2.204708e-51 | -8.615850e-47 |
| Msa0257490 | Msa0415430 | 0.831910 | 1.276654e-55 | -8.615850e-47 |
| Msa0261550 | Msa0415430 | 0.811343 | 7.341845e-51 | -8.615850e-47 |
| Msa0261720 | Msa0415430 | 0.815672 | 8.198338e-52 | -8.615850e-47 |
| Msa0266360 | Msa0415430 | 0.803714 | 3.056026e-49 | -8.615850e-47 |
| Msa0269470 | Msa0415430 | 0.826867 | 2.142546e-54 | -8.615850e-47 |
| Msa0271360 | Msa0415430 | 0.809053 | 2.288760e-50 | -8.615850e-47 |
| Msa0271890 | Msa0415430 | 0.826990 | 2.003215e-54 | -8.615850e-47 |
| Msa0273900 | Msa0415430 | 0.804462 | 2.135675e-49 | -8.615850e-47 |
| Msa0280430 | Msa0415430 | 0.806246 | 9.027352e-50 | -8.615850e-47 |
| Msa0284820 | Msa0415430 | 0.823356 | 1.447493e-53 | -8.615850e-47 |
| Msa0296790 | Msa0415430 | 0.823262 | 1.522935e-53 | -8.615850e-47 |
| Msa0296920 | Msa0415430 | 0.844132 | 9.134566e-59 | -8.615850e-47 |
| Msa0298700 | Msa0415430 | 0.821277 | 4.398370e-53 | -8.615850e-47 |
| Msa0300120 | Msa0415430 | 0.805822 | 1.108800e-49 | -8.615850e-47 |
| Msa0304590 | Msa0415430 | 0.821745 | 3.428539e-53 | -8.615850e-47 |
| Msa0304660 | Msa0415430 | 0.822374 | 2.451614e-53 | -8.615850e-47 |
| Msa0309880 | Msa0415430 | 0.818403 | 1.996315e-52 | -8.615850e-47 |
| Msa0310860 | Msa0415430 | 0.830743 | 2.473108e-55 | -8.615850e-47 |
| Msa0311700 | Msa0415430 | 0.809321 | 2.005016e-50 | -8.615850e-47 |
| Msa0314720 | Msa0415430 | 0.818980 | 1.476971e-52 | -8.615850e-47 |
| Msa0315440 | Msa0415430 | -0.806336 | 8.644099e-50 | -8.615850e-47 |
| Msa0315850 | Msa0415430 | 0.811306 | 7.479808e-51 | -8.615850e-47 |
| Msa0331700 | Msa0415430 | 0.821592 | 3.720775e-53 | -8.615850e-47 |
| Msa0337060 | Msa0415430 | 0.816052 | 6.744628e-52 | -8.615850e-47 |
| Msa0346430 | Msa0415430 | 0.840209 | 9.980262e-58 | -8.615850e-47 |
| Msa0359560 | Msa0415430 | 0.820914 | 5.331920e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415430 | MtrunA17_Chr3g0109351 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.26e-46 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0415430 | AT3G14430.1 | 65.079 | 63 | 21 | 1 | 9 | 71 | 15 | 76 | 1.08e-24 | 87.8 |
Find 36 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATACTCAGTTCTCAAATT+TGG | 0.144615 | 3_2:+61627110 | Msa0415430:three_prime_UTR |
| CAAACATCAATTCCTTTAAA+AGG | 0.150864 | 3_2:-61626760 | None:intergenic |
| TATCTTTCATGTCAAAGATA+TGG | 0.312816 | 3_2:-61627158 | None:intergenic |
| ATTTCTTACGAAGGCGAAAA+TGG | 0.322719 | 3_2:-61625611 | None:intergenic |
| GTTAATGTTACATTCTAGTT+AGG | 0.334854 | 3_2:+61626956 | Msa0415430:three_prime_UTR |
| ACAAATACTTGATTGTATTC+AGG | 0.336136 | 3_2:-61626705 | None:intergenic |
| GTATCTTTATGTAAGTTTGT+AGG | 0.358607 | 3_2:+61626899 | Msa0415430:three_prime_UTR |
| TTTGAGAACTGAGTATGAAT+AGG | 0.363509 | 3_2:-61627105 | None:intergenic |
| CTGGTGGTGGACCAGAGCTT+TGG | 0.389186 | 3_2:+61626736 | Msa0415430:CDS |
| CTTTAAAAGGGCCAAAGCTC+TGG | 0.402112 | 3_2:-61626747 | None:intergenic |
| TCTCATTCTATATCTCGTTT+CGG | 0.403988 | 3_2:+61627054 | Msa0415430:three_prime_UTR |
| ATCTCGTTTCGGTTTAGCTT+AGG | 0.404307 | 3_2:+61627065 | Msa0415430:three_prime_UTR |
| TGTCTGTCTCTATTTCAGAT+TGG | 0.429046 | 3_2:+61627022 | Msa0415430:three_prime_UTR |
| AAACATCAATTCCTTTAAAA+GGG | 0.443719 | 3_2:-61626759 | None:intergenic |
| TTGAGAACTGAGTATGAATA+GGG | 0.461008 | 3_2:-61627104 | None:intergenic |
| AAAGGAATTGATGTTTGGAC+AGG | 0.475928 | 3_2:+61626766 | Msa0415430:exon |
| CAAAGCTCTGGTCCACCACC+AGG | 0.488950 | 3_2:-61626735 | None:intergenic |
| CAAGTATTTGTGAAGAAGCC+TGG | 0.508253 | 3_2:+61626717 | Msa0415430:CDS |
| GACAGGTTGGACGTCATCCA+TGG | 0.522357 | 3_2:+61626783 | Msa0415430:three_prime_UTR |
| CATAAAGATACAAATACAAA+CGG | 0.528427 | 3_2:-61626887 | None:intergenic |
| CAGAGAGAAGAAGACTAGAC+TGG | 0.543222 | 3_2:+61625497 | Msa0415430:five_prime_UTR |
| GAATTGATGTTTGGACAGGT+TGG | 0.543485 | 3_2:+61626770 | Msa0415430:three_prime_UTR |
| AGCTTAGGAACAGAAATGCT+CGG | 0.563945 | 3_2:+61627080 | Msa0415430:three_prime_UTR |
| TGAAGAAGAAAAGAAAGAAG+AGG | 0.565354 | 3_2:-61625648 | None:intergenic |
| AGAGAACAGCGATGGCTAGA+CGG | 0.584999 | 3_2:+61625542 | Msa0415430:exon |
| CTAGACGGCGAGTCGAGACT+CGG | 0.585126 | 3_2:+61625557 | Msa0415430:CDS |
| GAAATATGTAAAATCATCAC+AGG | 0.585504 | 3_2:-61626865 | None:intergenic |
| AAAATATGTGAAATCATCAC+AGG | 0.600529 | 3_2:-61626824 | None:intergenic |
| GGAACGAGTCGTTATTGACT+CGG | 0.604165 | 3_2:+61625578 | Msa0415430:CDS |
| TTTGTGAAGAAGCCTGGTGG+TGG | 0.604245 | 3_2:+61626723 | Msa0415430:CDS |
| ATTAACATCATTCAAATCTG+TGG | 0.614330 | 3_2:-61626939 | None:intergenic |
| GAGGTGAGAGAGAACAGCGA+TGG | 0.620676 | 3_2:+61625534 | Msa0415430:exon |
| AAACTCAGCATTTCTTACGA+AGG | 0.638252 | 3_2:-61625620 | None:intergenic |
| GCGTGCTTAGAATACCTCCA+TGG | 0.702615 | 3_2:-61626800 | None:intergenic |
| AGGTTGGACGTCATCCATGG+AGG | 0.746774 | 3_2:+61626786 | Msa0415430:three_prime_UTR |
| GTATTTGTGAAGAAGCCTGG+TGG | 0.787083 | 3_2:+61626720 | Msa0415430:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGGATAATTATATCAAAA+AGG | + | chr3_2:61625884-61625903 | Msa0415430:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr3_2:61626254-61626273 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr3_2:61626155-61626174 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr3_2:61626254-61626273 | Msa0415430:intron | 15.0% |
| !!! | TTTTGATAAGTGAATATTTT+TGG | + | chr3_2:61626562-61626581 | Msa0415430:intron | 15.0% |
| !! | ATTGGATAATTATATCAAAA+AGG | + | chr3_2:61625884-61625903 | Msa0415430:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr3_2:61626254-61626273 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr3_2:61626155-61626174 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr3_2:61626254-61626273 | Msa0415430:intron | 15.0% |
| !!! | TTTTGATAAGTGAATATTTT+TGG | + | chr3_2:61626562-61626581 | Msa0415430:intron | 15.0% |
| !! | ACAAAAAAAAAAAAAGAGAG+AGG | - | chr3_2:61625711-61625730 | None:intergenic | 20.0% |
| !!! | CTTTTAATGTTTGAGAAATT+AGG | + | chr3_2:61625800-61625819 | Msa0415430:intron | 20.0% |
| !! | TTAGTTACTAAATTGAAAAC+TGG | + | chr3_2:61625850-61625869 | Msa0415430:intron | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | chr3_2:61626535-61626554 | Msa0415430:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | chr3_2:61626539-61626558 | Msa0415430:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | chr3_2:61626762-61626781 | None:intergenic | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | chr3_2:61626890-61626909 | None:intergenic | 20.0% |
| !! | ACAAAAAAAAAAAAAGAGAG+AGG | - | chr3_2:61625711-61625730 | None:intergenic | 20.0% |
| !!! | CTTTTAATGTTTGAGAAATT+AGG | + | chr3_2:61625800-61625819 | Msa0415430:intron | 20.0% |
| !! | TTAGTTACTAAATTGAAAAC+TGG | + | chr3_2:61625850-61625869 | Msa0415430:intron | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | chr3_2:61626535-61626554 | Msa0415430:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | chr3_2:61626539-61626558 | Msa0415430:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | chr3_2:61626762-61626781 | None:intergenic | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | chr3_2:61626890-61626909 | None:intergenic | 20.0% |
| ! | TTTGAACAAATGATGCAAAT+GGG | - | chr3_2:61625746-61625765 | None:intergenic | 25.0% |
| ! | ATTTGAACAAATGATGCAAA+TGG | - | chr3_2:61625747-61625766 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATC+TGG | + | chr3_2:61625764-61625783 | Msa0415430:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATCT+GGG | + | chr3_2:61625765-61625784 | Msa0415430:intron | 25.0% |
| ! | AACTATATACCAATTCCAAT+TGG | - | chr3_2:61625924-61625943 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr3_2:61626180-61626199 | Msa0415430:intron | 25.0% |
| ! | ATGTATGTGGTACATATTTA+TGG | - | chr3_2:61626207-61626226 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr3_2:61626180-61626199 | None:intergenic | 25.0% |
| ! | TTAAATTACAATCAGCATGT+TGG | + | chr3_2:61626335-61626354 | Msa0415430:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr3_2:61626460-61626479 | Msa0415430:intron | 25.0% |
| !! | TTGTCTTGTAATTTCACTTT+TGG | + | chr3_2:61626637-61626656 | Msa0415430:intron | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | chr3_2:61626708-61626727 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | chr3_2:61626763-61626782 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | chr3_2:61626761-61626780 | Msa0415430:exon | 25.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | chr3_2:61626827-61626846 | None:intergenic | 25.0% |
| ! | GAAATATGTAAAATCATCAC+AGG | - | chr3_2:61626868-61626887 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | chr3_2:61626899-61626918 | Msa0415430:three_prime_UTR | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | chr3_2:61626942-61626961 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | chr3_2:61626956-61626975 | Msa0415430:three_prime_UTR | 25.0% |
| ! | TATCTTTCATGTCAAAGATA+TGG | - | chr3_2:61627161-61627180 | None:intergenic | 25.0% |
| ! | TTTGAACAAATGATGCAAAT+GGG | - | chr3_2:61625746-61625765 | None:intergenic | 25.0% |
| ! | ATTTGAACAAATGATGCAAA+TGG | - | chr3_2:61625747-61625766 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATC+TGG | + | chr3_2:61625764-61625783 | Msa0415430:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATCT+GGG | + | chr3_2:61625765-61625784 | Msa0415430:intron | 25.0% |
| ! | AACTATATACCAATTCCAAT+TGG | - | chr3_2:61625924-61625943 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr3_2:61626180-61626199 | Msa0415430:intron | 25.0% |
| ! | ATGTATGTGGTACATATTTA+TGG | - | chr3_2:61626207-61626226 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr3_2:61626180-61626199 | None:intergenic | 25.0% |
| ! | TTAAATTACAATCAGCATGT+TGG | + | chr3_2:61626335-61626354 | Msa0415430:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr3_2:61626460-61626479 | Msa0415430:intron | 25.0% |
| !! | TTGTCTTGTAATTTCACTTT+TGG | + | chr3_2:61626637-61626656 | Msa0415430:intron | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | chr3_2:61626708-61626727 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | chr3_2:61626763-61626782 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | chr3_2:61626761-61626780 | Msa0415430:exon | 25.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | chr3_2:61626827-61626846 | None:intergenic | 25.0% |
| ! | GAAATATGTAAAATCATCAC+AGG | - | chr3_2:61626868-61626887 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | chr3_2:61626899-61626918 | Msa0415430:three_prime_UTR | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | chr3_2:61626942-61626961 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | chr3_2:61626956-61626975 | Msa0415430:three_prime_UTR | 25.0% |
| ! | TATCTTTCATGTCAAAGATA+TGG | - | chr3_2:61627161-61627180 | None:intergenic | 25.0% |
| ! | ACTGGATTGTTAGAATTTTG+AGG | + | chr3_2:61625515-61625534 | Msa0415430:five_prime_UTR | 30.0% |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | chr3_2:61625651-61625670 | None:intergenic | 30.0% | |
| ATTCTGTTTCCAATTGGAAT+TGG | + | chr3_2:61625912-61625931 | Msa0415430:intron | 30.0% | |
| ACTGATGAAAACAACTTACA+AGG | - | chr3_2:61626090-61626109 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr3_2:61626258-61626277 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr3_2:61626257-61626276 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr3_2:61626257-61626276 | Msa0415430:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr3_2:61626258-61626277 | Msa0415430:intron | 30.0% |
| TGAAATTACAAGACAAACAG+AGG | - | chr3_2:61626633-61626652 | None:intergenic | 30.0% | |
| TCTCATTCTATATCTCGTTT+CGG | + | chr3_2:61627054-61627073 | Msa0415430:three_prime_UTR | 30.0% | |
| TTGAGAACTGAGTATGAATA+GGG | - | chr3_2:61627107-61627126 | None:intergenic | 30.0% | |
| TTTGAGAACTGAGTATGAAT+AGG | - | chr3_2:61627108-61627127 | None:intergenic | 30.0% | |
| TCATACTCAGTTCTCAAATT+TGG | + | chr3_2:61627110-61627129 | Msa0415430:three_prime_UTR | 30.0% | |
| ! | ACTGGATTGTTAGAATTTTG+AGG | + | chr3_2:61625515-61625534 | Msa0415430:five_prime_UTR | 30.0% |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | chr3_2:61625651-61625670 | None:intergenic | 30.0% | |
| ATTCTGTTTCCAATTGGAAT+TGG | + | chr3_2:61625912-61625931 | Msa0415430:intron | 30.0% | |
| ACTGATGAAAACAACTTACA+AGG | - | chr3_2:61626090-61626109 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr3_2:61626258-61626277 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr3_2:61626257-61626276 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr3_2:61626257-61626276 | Msa0415430:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr3_2:61626258-61626277 | Msa0415430:intron | 30.0% |
| TGAAATTACAAGACAAACAG+AGG | - | chr3_2:61626633-61626652 | None:intergenic | 30.0% | |
| TCTCATTCTATATCTCGTTT+CGG | + | chr3_2:61627054-61627073 | Msa0415430:three_prime_UTR | 30.0% | |
| TTGAGAACTGAGTATGAATA+GGG | - | chr3_2:61627107-61627126 | None:intergenic | 30.0% | |
| TTTGAGAACTGAGTATGAAT+AGG | - | chr3_2:61627108-61627127 | None:intergenic | 30.0% | |
| TCATACTCAGTTCTCAAATT+TGG | + | chr3_2:61627110-61627129 | Msa0415430:three_prime_UTR | 30.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | chr3_2:61625614-61625633 | None:intergenic | 35.0% | |
| AAACTCAGCATTTCTTACGA+AGG | - | chr3_2:61625623-61625642 | None:intergenic | 35.0% | |
| !! | AAACTGGTTTGACGATTGAT+TGG | + | chr3_2:61625866-61625885 | Msa0415430:intron | 35.0% |
| GTAGAGATTCTGTTTCCAAT+TGG | + | chr3_2:61625906-61625925 | Msa0415430:intron | 35.0% | |
| GATTACGAGTCTGTTTGAAT+TGG | - | chr3_2:61626312-61626331 | None:intergenic | 35.0% | |
| ATTACAAGACAAACAGAGGA+GGG | - | chr3_2:61626629-61626648 | None:intergenic | 35.0% | |
| AATTACAAGACAAACAGAGG+AGG | - | chr3_2:61626630-61626649 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | chr3_2:61626766-61626785 | Msa0415430:exon | 35.0% | |
| TGTCTGTCTCTATTTCAGAT+TGG | + | chr3_2:61627022-61627041 | Msa0415430:three_prime_UTR | 35.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | chr3_2:61625614-61625633 | None:intergenic | 35.0% | |
| AAACTCAGCATTTCTTACGA+AGG | - | chr3_2:61625623-61625642 | None:intergenic | 35.0% | |
| !! | AAACTGGTTTGACGATTGAT+TGG | + | chr3_2:61625866-61625885 | Msa0415430:intron | 35.0% |
| GTAGAGATTCTGTTTCCAAT+TGG | + | chr3_2:61625906-61625925 | Msa0415430:intron | 35.0% | |
| GATTACGAGTCTGTTTGAAT+TGG | - | chr3_2:61626312-61626331 | None:intergenic | 35.0% | |
| ATTACAAGACAAACAGAGGA+GGG | - | chr3_2:61626629-61626648 | None:intergenic | 35.0% | |
| AATTACAAGACAAACAGAGG+AGG | - | chr3_2:61626630-61626649 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | chr3_2:61626766-61626785 | Msa0415430:exon | 35.0% | |
| TGTCTGTCTCTATTTCAGAT+TGG | + | chr3_2:61627022-61627041 | Msa0415430:three_prime_UTR | 35.0% | |
| !!! | ACAATCAGCATGTTGGCTTT+TGG | + | chr3_2:61626342-61626361 | Msa0415430:intron | 40.0% |
| TGGTGTATCATGTGTGAACA+CGG | + | chr3_2:61626362-61626381 | Msa0415430:intron | 40.0% | |
| TTCTCAAATTAGGTGTGTCC+CGG | - | chr3_2:61626506-61626525 | None:intergenic | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | chr3_2:61626717-61626736 | Msa0415430:CDS | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | chr3_2:61626770-61626789 | Msa0415430:three_prime_UTR | 40.0% | |
| ! | ATCTCGTTTCGGTTTAGCTT+AGG | + | chr3_2:61627065-61627084 | Msa0415430:three_prime_UTR | 40.0% |
| AGCTTAGGAACAGAAATGCT+CGG | + | chr3_2:61627080-61627099 | Msa0415430:three_prime_UTR | 40.0% | |
| !!! | ACAATCAGCATGTTGGCTTT+TGG | + | chr3_2:61626342-61626361 | Msa0415430:intron | 40.0% |
| TGGTGTATCATGTGTGAACA+CGG | + | chr3_2:61626362-61626381 | Msa0415430:intron | 40.0% | |
| TTCTCAAATTAGGTGTGTCC+CGG | - | chr3_2:61626506-61626525 | None:intergenic | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | chr3_2:61626717-61626736 | Msa0415430:CDS | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | chr3_2:61626770-61626789 | Msa0415430:three_prime_UTR | 40.0% | |
| ! | ATCTCGTTTCGGTTTAGCTT+AGG | + | chr3_2:61627065-61627084 | Msa0415430:three_prime_UTR | 40.0% |
| AGCTTAGGAACAGAAATGCT+CGG | + | chr3_2:61627080-61627099 | Msa0415430:three_prime_UTR | 40.0% | |
| CAGAGAGAAGAAGACTAGAC+TGG | + | chr3_2:61625497-61625516 | Msa0415430:five_prime_UTR | 45.0% | |
| ! | GGAACGAGTCGTTATTGACT+CGG | + | chr3_2:61625578-61625597 | Msa0415430:CDS | 45.0% |
| ! | TTGAAACGGAGGGAGTATGT+CGG | + | chr3_2:61626268-61626287 | Msa0415430:intron | 45.0% |
| TGCAGACATCAGACACGAAA+CGG | + | chr3_2:61626392-61626411 | Msa0415430:intron | 45.0% | |
| GCACGCACACTTCTCAAATT+AGG | - | chr3_2:61626516-61626535 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | chr3_2:61626720-61626739 | Msa0415430:CDS | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | chr3_2:61626750-61626769 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | chr3_2:61626748-61626767 | Msa0415430:CDS | 45.0% |
| CAGAGAGAAGAAGACTAGAC+TGG | + | chr3_2:61625497-61625516 | Msa0415430:five_prime_UTR | 45.0% | |
| ! | GGAACGAGTCGTTATTGACT+CGG | + | chr3_2:61625578-61625597 | Msa0415430:CDS | 45.0% |
| ! | TTGAAACGGAGGGAGTATGT+CGG | + | chr3_2:61626268-61626287 | Msa0415430:intron | 45.0% |
| TGCAGACATCAGACACGAAA+CGG | + | chr3_2:61626392-61626411 | Msa0415430:intron | 45.0% | |
| GCACGCACACTTCTCAAATT+AGG | - | chr3_2:61626516-61626535 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | chr3_2:61626720-61626739 | Msa0415430:CDS | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | chr3_2:61626750-61626769 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | chr3_2:61626748-61626767 | Msa0415430:CDS | 45.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | chr3_2:61626435-61626454 | None:intergenic | 5.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | chr3_2:61626435-61626454 | None:intergenic | 5.0% |
| AGAGAACAGCGATGGCTAGA+CGG | + | chr3_2:61625542-61625561 | Msa0415430:exon | 50.0% | |
| ATCATGTGTGAACACGGACG+CGG | + | chr3_2:61626368-61626387 | Msa0415430:intron | 50.0% | |
| CATCAGACACGAAACGGACA+TGG | + | chr3_2:61626398-61626417 | Msa0415430:intron | 50.0% | |
| !! | CATATGTGTCGGTGTCGTGT+TGG | + | chr3_2:61626471-61626490 | Msa0415430:intron | 50.0% |
| AATTAGGTGTGTCCCGGTGT+CGG | - | chr3_2:61626500-61626519 | None:intergenic | 50.0% | |
| AAGACAAACAGAGGAGGGAG+CGG | - | chr3_2:61626624-61626643 | None:intergenic | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | chr3_2:61626723-61626742 | Msa0415430:CDS | 50.0% | |
| GCGTGCTTAGAATACCTCCA+TGG | - | chr3_2:61626803-61626822 | None:intergenic | 50.0% | |
| AGAGAACAGCGATGGCTAGA+CGG | + | chr3_2:61625542-61625561 | Msa0415430:exon | 50.0% | |
| ATCATGTGTGAACACGGACG+CGG | + | chr3_2:61626368-61626387 | Msa0415430:intron | 50.0% | |
| CATCAGACACGAAACGGACA+TGG | + | chr3_2:61626398-61626417 | Msa0415430:intron | 50.0% | |
| !! | CATATGTGTCGGTGTCGTGT+TGG | + | chr3_2:61626471-61626490 | Msa0415430:intron | 50.0% |
| AATTAGGTGTGTCCCGGTGT+CGG | - | chr3_2:61626500-61626519 | None:intergenic | 50.0% | |
| AAGACAAACAGAGGAGGGAG+CGG | - | chr3_2:61626624-61626643 | None:intergenic | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | chr3_2:61626723-61626742 | Msa0415430:CDS | 50.0% | |
| GCGTGCTTAGAATACCTCCA+TGG | - | chr3_2:61626803-61626822 | None:intergenic | 50.0% | |
| GAGGTGAGAGAGAACAGCGA+TGG | + | chr3_2:61625534-61625553 | Msa0415430:exon | 55.0% | |
| AGACAAACAGAGGAGGGAGC+GGG | - | chr3_2:61626623-61626642 | None:intergenic | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | chr3_2:61626783-61626802 | Msa0415430:three_prime_UTR | 55.0% |
| AGGTTGGACGTCATCCATGG+AGG | + | chr3_2:61626786-61626805 | Msa0415430:three_prime_UTR | 55.0% | |
| GAGGTGAGAGAGAACAGCGA+TGG | + | chr3_2:61625534-61625553 | Msa0415430:exon | 55.0% | |
| AGACAAACAGAGGAGGGAGC+GGG | - | chr3_2:61626623-61626642 | None:intergenic | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | chr3_2:61626783-61626802 | Msa0415430:three_prime_UTR | 55.0% |
| AGGTTGGACGTCATCCATGG+AGG | + | chr3_2:61626786-61626805 | Msa0415430:three_prime_UTR | 55.0% | |
| CTAGACGGCGAGTCGAGACT+CGG | + | chr3_2:61625557-61625576 | Msa0415430:CDS | 60.0% | |
| ! | GTCGTGTTGGTGTCCGACAC+CGG | + | chr3_2:61626484-61626503 | Msa0415430:intron | 60.0% |
| ! | TCGTGTTGGTGTCCGACACC+GGG | + | chr3_2:61626485-61626504 | Msa0415430:intron | 60.0% |
| ACAAACAGAGGAGGGAGCGG+GGG | - | chr3_2:61626621-61626640 | None:intergenic | 60.0% | |
| GACAAACAGAGGAGGGAGCG+GGG | - | chr3_2:61626622-61626641 | None:intergenic | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | chr3_2:61626738-61626757 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | chr3_2:61626736-61626755 | Msa0415430:CDS | 60.0% |
| CTAGACGGCGAGTCGAGACT+CGG | + | chr3_2:61625557-61625576 | Msa0415430:CDS | 60.0% | |
| ! | GTCGTGTTGGTGTCCGACAC+CGG | + | chr3_2:61626484-61626503 | Msa0415430:intron | 60.0% |
| ! | TCGTGTTGGTGTCCGACACC+GGG | + | chr3_2:61626485-61626504 | Msa0415430:intron | 60.0% |
| ACAAACAGAGGAGGGAGCGG+GGG | - | chr3_2:61626621-61626640 | None:intergenic | 60.0% | |
| GACAAACAGAGGAGGGAGCG+GGG | - | chr3_2:61626622-61626641 | None:intergenic | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | chr3_2:61626738-61626757 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | chr3_2:61626736-61626755 | Msa0415430:CDS | 60.0% |
| AACAGAGGAGGGAGCGGGGG+TGG | - | chr3_2:61626618-61626637 | None:intergenic | 70.0% | |
| AACAGAGGAGGGAGCGGGGG+TGG | - | chr3_2:61626618-61626637 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 61625485 | 61627219 | 61625485 | ID=Msa0415430;Name=Msa0415430 |
| chr3_2 | mRNA | 61625485 | 61627219 | 61625485 | ID=Msa0415430-mRNA-1;Parent=Msa0415430;Name=Msa0415430-mRNA-1;_AED=0.02;_eAED=0.02;_QI=68|1|1|1|1|1|2|452|71 |
| chr3_2 | exon | 61625485 | 61625696 | 61625485 | ID=Msa0415430-mRNA-1:exon:13020;Parent=Msa0415430-mRNA-1 |
| chr3_2 | exon | 61626696 | 61627219 | 61626696 | ID=Msa0415430-mRNA-1:exon:13021;Parent=Msa0415430-mRNA-1 |
| chr3_2 | five_prime_UTR | 61625485 | 61625552 | 61625485 | ID=Msa0415430-mRNA-1:five_prime_utr;Parent=Msa0415430-mRNA-1 |
| chr3_2 | CDS | 61625553 | 61625696 | 61625553 | ID=Msa0415430-mRNA-1:cds;Parent=Msa0415430-mRNA-1 |
| chr3_2 | CDS | 61626696 | 61626767 | 61626696 | ID=Msa0415430-mRNA-1:cds;Parent=Msa0415430-mRNA-1 |
| chr3_2 | three_prime_UTR | 61626768 | 61627219 | 61626768 | ID=Msa0415430-mRNA-1:three_prime_utr;Parent=Msa0415430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
