Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140110 | XP_003600586.1 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.46e-42 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140110 | G7J780 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 1.17e-42 | 142 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0140110 | 0.835505 | 1.613950e-56 | -8.615850e-47 |
| Msa0004840 | Msa0140110 | 0.816386 | 5.679815e-52 | -8.615850e-47 |
| Msa0008090 | Msa0140110 | 0.822143 | 2.772912e-53 | -8.615850e-47 |
| Msa0020390 | Msa0140110 | 0.852119 | 5.688634e-61 | -8.615850e-47 |
| Msa0020410 | Msa0140110 | 0.800366 | 1.490702e-48 | -8.615850e-47 |
| Msa0023000 | Msa0140110 | 0.813848 | 2.078984e-51 | -8.615850e-47 |
| Msa0029260 | Msa0140110 | 0.805547 | 1.266188e-49 | -8.615850e-47 |
| Msa0029630 | Msa0140110 | 0.801986 | 6.951120e-49 | -8.615850e-47 |
| Msa0037840 | Msa0140110 | 0.808932 | 2.428883e-50 | -8.615850e-47 |
| Msa0038870 | Msa0140110 | 0.815816 | 7.616310e-52 | -8.615850e-47 |
| Msa0043980 | Msa0140110 | 0.817388 | 3.384967e-52 | -8.615850e-47 |
| Msa0044000 | Msa0140110 | 0.801991 | 6.933739e-49 | -8.615850e-47 |
| Msa0046740 | Msa0140110 | 0.817073 | 3.984527e-52 | -8.615850e-47 |
| Msa0047980 | Msa0140110 | 0.808054 | 3.739800e-50 | -8.615850e-47 |
| Msa0054230 | Msa0140110 | 0.801317 | 9.533172e-49 | -8.615850e-47 |
| Msa0056470 | Msa0140110 | 0.820714 | 5.928370e-53 | -8.615850e-47 |
| Msa0064350 | Msa0140110 | 0.820828 | 5.579377e-53 | -8.615850e-47 |
| Msa0065950 | Msa0140110 | 0.815039 | 1.134023e-51 | -8.615850e-47 |
| Msa0068020 | Msa0140110 | 0.823927 | 1.064299e-53 | -8.615850e-47 |
| Msa0084940 | Msa0140110 | 0.814680 | 1.362130e-51 | -8.615850e-47 |
| Msa0090520 | Msa0140110 | 0.805567 | 1.254070e-49 | -8.615850e-47 |
| Msa0090550 | Msa0140110 | 0.818480 | 1.918136e-52 | -8.615850e-47 |
| Msa0090570 | Msa0140110 | 0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0091610 | Msa0140110 | 0.819395 | 1.187827e-52 | -8.615850e-47 |
| Msa0093010 | Msa0140110 | 0.820592 | 6.324141e-53 | -8.615850e-47 |
| Msa0093420 | Msa0140110 | 0.806172 | 9.358564e-50 | -8.615850e-47 |
| Msa0096980 | Msa0140110 | 0.824156 | 9.403593e-54 | -8.615850e-47 |
| Msa0100740 | Msa0140110 | 0.801454 | 8.935529e-49 | -8.615850e-47 |
| Msa0115370 | Msa0140110 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0115390 | Msa0140110 | 0.806850 | 6.733822e-50 | -8.615850e-47 |
| Msa0115990 | Msa0140110 | 0.830228 | 3.305578e-55 | -8.615850e-47 |
| Msa0118540 | Msa0140110 | 0.811055 | 8.476984e-51 | -8.615850e-47 |
| Msa0118780 | Msa0140110 | 0.800049 | 1.729241e-48 | -8.615850e-47 |
| Msa0123560 | Msa0140110 | 0.816398 | 5.646255e-52 | -8.615850e-47 |
| Msa0125450 | Msa0140110 | 0.819390 | 1.190972e-52 | -8.615850e-47 |
| Msa0125540 | Msa0140110 | 0.823423 | 1.396419e-53 | -8.615850e-47 |
| Msa0127800 | Msa0140110 | 0.804631 | 1.968571e-49 | -8.615850e-47 |
| Msa0137820 | Msa0140110 | 0.801129 | 1.041447e-48 | -8.615850e-47 |
| Msa0137990 | Msa0140110 | 0.805120 | 1.555992e-49 | -8.615850e-47 |
| Msa0140110 | Msa0140650 | 0.834192 | 3.455606e-56 | -8.615850e-47 |
| Msa0140110 | Msa0140820 | 0.816419 | 5.585286e-52 | -8.615850e-47 |
| Msa0140110 | Msa0145010 | 0.822243 | 2.629743e-53 | -8.615850e-47 |
| Msa0140110 | Msa0159420 | 0.819430 | 1.166041e-52 | -8.615850e-47 |
| Msa0140110 | Msa0162130 | 0.812732 | 3.656257e-51 | -8.615850e-47 |
| Msa0140110 | Msa0169300 | 0.804869 | 1.756424e-49 | -8.615850e-47 |
| Msa0140110 | Msa0173070 | 0.808670 | 2.763779e-50 | -8.615850e-47 |
| Msa0140110 | Msa0183460 | 0.810479 | 1.129148e-50 | -8.615850e-47 |
| Msa0140110 | Msa0183850 | 0.800093 | 1.694337e-48 | -8.615850e-47 |
| Msa0140110 | Msa0183870 | 0.820684 | 6.023952e-53 | -8.615850e-47 |
| Msa0140110 | Msa0183900 | 0.805721 | 1.164312e-49 | -8.615850e-47 |
| Msa0140110 | Msa0189520 | 0.838237 | 3.239978e-57 | -8.615850e-47 |
| Msa0140110 | Msa0190120 | 0.830041 | 3.670614e-55 | -8.615850e-47 |
| Msa0140110 | Msa0190590 | 0.804105 | 2.533740e-49 | -8.615850e-47 |
| Msa0140110 | Msa0191050 | 0.808856 | 2.521486e-50 | -8.615850e-47 |
| Msa0140110 | Msa0191070 | 0.805578 | 1.247833e-49 | -8.615850e-47 |
| Msa0140110 | Msa0191440 | 0.814846 | 1.251310e-51 | -8.615850e-47 |
| Msa0140110 | Msa0194480 | 0.851985 | 6.211432e-61 | -8.615850e-47 |
| Msa0140110 | Msa0199690 | 0.824910 | 6.248289e-54 | -8.615850e-47 |
| Msa0140110 | Msa0199880 | 0.808073 | 3.704354e-50 | -8.615850e-47 |
| Msa0140110 | Msa0209080 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0140110 | Msa0209350 | 0.814059 | 1.868322e-51 | -8.615850e-47 |
| Msa0140110 | Msa0209500 | 0.809452 | 1.879379e-50 | -8.615850e-47 |
| Msa0140110 | Msa0220250 | 0.814062 | 1.865059e-51 | -8.615850e-47 |
| Msa0140110 | Msa0231790 | 0.832411 | 9.597715e-56 | -8.615850e-47 |
| Msa0140110 | Msa0231980 | 0.820649 | 6.135136e-53 | -8.615850e-47 |
| Msa0140110 | Msa0232050 | 0.819825 | 9.473745e-53 | -8.615850e-47 |
| Msa0140110 | Msa0233350 | 0.812312 | 4.516967e-51 | -8.615850e-47 |
| Msa0140110 | Msa0233370 | 0.813758 | 2.176728e-51 | -8.615850e-47 |
| Msa0140110 | Msa0236270 | 0.828970 | 6.687198e-55 | -8.615850e-47 |
| Msa0140110 | Msa0243090 | 0.817995 | 2.469576e-52 | -8.615850e-47 |
| Msa0140110 | Msa0257490 | 0.838956 | 2.113231e-57 | -8.615850e-47 |
| Msa0140110 | Msa0261550 | 0.815837 | 7.534657e-52 | -8.615850e-47 |
| Msa0140110 | Msa0261720 | 0.821753 | 3.414518e-53 | -8.615850e-47 |
| Msa0140110 | Msa0266360 | 0.802069 | 6.682934e-49 | -8.615850e-47 |
| Msa0140110 | Msa0269470 | 0.829172 | 5.971708e-55 | -8.615850e-47 |
| Msa0140110 | Msa0271360 | 0.811965 | 5.377670e-51 | -8.615850e-47 |
| Msa0140110 | Msa0271890 | 0.829170 | 5.980114e-55 | -8.615850e-47 |
| Msa0140110 | Msa0272300 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0140110 | Msa0273900 | 0.804530 | 2.067066e-49 | -8.615850e-47 |
| Msa0140110 | Msa0280430 | 0.801205 | 1.005030e-48 | -8.615850e-47 |
| Msa0140110 | Msa0284820 | 0.824971 | 6.045128e-54 | -8.615850e-47 |
| Msa0140110 | Msa0291500 | 0.801498 | 8.754175e-49 | -8.615850e-47 |
| Msa0140110 | Msa0296790 | 0.828117 | 1.074471e-54 | -8.615850e-47 |
| Msa0140110 | Msa0296920 | 0.845477 | 3.962984e-59 | -8.615850e-47 |
| Msa0140110 | Msa0298700 | 0.821715 | 3.483923e-53 | -8.615850e-47 |
| Msa0140110 | Msa0300120 | 0.807348 | 5.280577e-50 | -8.615850e-47 |
| Msa0140110 | Msa0304590 | 0.818519 | 1.879441e-52 | -8.615850e-47 |
| Msa0140110 | Msa0304660 | 0.819685 | 1.020147e-52 | -8.615850e-47 |
| Msa0140110 | Msa0309880 | 0.824732 | 6.881173e-54 | -8.615850e-47 |
| Msa0140110 | Msa0310860 | 0.833131 | 6.360940e-56 | -8.615850e-47 |
| Msa0140110 | Msa0311700 | 0.811527 | 6.695046e-51 | -8.615850e-47 |
| Msa0140110 | Msa0314720 | 0.815583 | 8.583522e-52 | -8.615850e-47 |
| Msa0140110 | Msa0315440 | -0.808840 | 2.541899e-50 | -8.615850e-47 |
| Msa0140110 | Msa0315850 | 0.812129 | 4.951037e-51 | -8.615850e-47 |
| Msa0140110 | Msa0331700 | 0.818774 | 1.644440e-52 | -8.615850e-47 |
| Msa0140110 | Msa0337060 | 0.822044 | 2.924508e-53 | -8.615850e-47 |
| Msa0140110 | Msa0346430 | 0.843654 | 1.227152e-58 | -8.615850e-47 |
| Msa0140110 | Msa0359560 | 0.819779 | 9.707022e-53 | -8.615850e-47 |
| Msa0140110 | Msa0366890 | 0.802575 | 5.256685e-49 | -8.615850e-47 |
| Msa0140110 | Msa0375980 | 0.827559 | 1.463344e-54 | -8.615850e-47 |
| Msa0140110 | Msa0376300 | 0.812005 | 5.270825e-51 | -8.615850e-47 |
| Msa0140110 | Msa0376310 | 0.813639 | 2.311361e-51 | -8.615850e-47 |
| Msa0140110 | Msa0376690 | 0.819206 | 1.311571e-52 | -8.615850e-47 |
| Msa0140110 | Msa0376910 | 0.809386 | 1.941232e-50 | -8.615850e-47 |
| Msa0140110 | Msa0378490 | 0.817643 | 2.965406e-52 | -8.615850e-47 |
| Msa0140110 | Msa0380300 | 0.837525 | 4.937682e-57 | -8.615850e-47 |
| Msa0140110 | Msa0385500 | 0.833402 | 5.445774e-56 | -8.615850e-47 |
| Msa0140110 | Msa0391690 | 0.841060 | 5.972856e-58 | -8.615850e-47 |
| Msa0140110 | Msa0403770 | 0.801171 | 1.021259e-48 | -8.615850e-47 |
| Msa0140110 | Msa0414800 | 0.808801 | 2.591239e-50 | -8.615850e-47 |
| Msa0140110 | Msa0415430 | 0.998940 | 1.004044e-282 | -8.615850e-47 |
| Msa0140110 | Msa0433360 | 0.812981 | 3.225100e-51 | -8.615850e-47 |
| Msa0140110 | Msa0442200 | 0.803933 | 2.751949e-49 | -8.615850e-47 |
| Msa0140110 | Msa0453350 | 0.817976 | 2.493971e-52 | -8.615850e-47 |
| Msa0140110 | Msa0458060 | 0.800415 | 1.456758e-48 | -8.615850e-47 |
| Msa0140110 | Msa0460100 | 0.804673 | 1.929295e-49 | -8.615850e-47 |
| Msa0140110 | Msa0469850 | 0.814312 | 1.642886e-51 | -8.615850e-47 |
| Msa0140110 | Msa0469990 | 0.803788 | 2.949373e-49 | -8.615850e-47 |
| Msa0140110 | Msa0471440 | 0.805108 | 1.564796e-49 | -8.615850e-47 |
| Msa0140110 | Msa0471590 | 0.837487 | 5.049032e-57 | -8.615850e-47 |
| Msa0140110 | Msa0477080 | 0.821577 | 3.750816e-53 | -8.615850e-47 |
| Msa0140110 | Msa0479270 | 0.823825 | 1.124551e-53 | -8.615850e-47 |
| Msa0140110 | Msa0481480 | 0.809672 | 1.685293e-50 | -8.615850e-47 |
| Msa0140110 | Msa0481810 | 0.848831 | 4.769267e-60 | -8.615850e-47 |
| Msa0140110 | Msa0484740 | 0.816958 | 4.227875e-52 | -8.615850e-47 |
| Msa0140110 | Msa0485850 | 0.991608 | 1.461938e-188 | -8.615850e-47 |
| Msa0140110 | Msa0489610 | 0.808054 | 3.739800e-50 | -8.615850e-47 |
| Msa0140110 | Msa0520790 | 0.822681 | 2.079611e-53 | -8.615850e-47 |
| Msa0140110 | Msa0521050 | 0.801524 | 8.644573e-49 | -8.615850e-47 |
| Msa0140110 | Msa0524500 | 0.819482 | 1.134850e-52 | -8.615850e-47 |
| Msa0140110 | Msa0531530 | 0.811490 | 6.822809e-51 | -8.615850e-47 |
| Msa0140110 | Msa0534410 | 0.812995 | 3.201398e-51 | -8.615850e-47 |
| Msa0140110 | Msa0534900 | 0.818061 | 2.385974e-52 | -8.615850e-47 |
| Msa0140110 | Msa0542290 | 0.815173 | 1.058698e-51 | -8.615850e-47 |
| Msa0140110 | Msa0542560 | 0.834259 | 3.323345e-56 | -8.615850e-47 |
| Msa0140110 | Msa0544840 | 0.810059 | 1.391490e-50 | -8.615850e-47 |
| Msa0140110 | Msa0547160 | 0.848361 | 6.435641e-60 | -8.615850e-47 |
| Msa0140110 | Msa0548240 | 0.814184 | 1.753604e-51 | -8.615850e-47 |
| Msa0140110 | Msa0552810 | 0.818776 | 1.642595e-52 | -8.615850e-47 |
| Msa0140110 | Msa0556060 | 0.825503 | 4.523017e-54 | -8.615850e-47 |
| Msa0140110 | Msa0557480 | 0.821446 | 4.019415e-53 | -8.615850e-47 |
| Msa0140110 | Msa0580280 | 0.814337 | 1.621770e-51 | -8.615850e-47 |
| Msa0140110 | Msa0581070 | 0.806534 | 7.851806e-50 | -8.615850e-47 |
| Msa0140110 | Msa0581110 | 0.830996 | 2.143696e-55 | -8.615850e-47 |
| Msa0140110 | Msa0588240 | 0.809684 | 1.675660e-50 | -8.615850e-47 |
| Msa0140110 | Msa0588260 | 0.849382 | 3.352879e-60 | -8.615850e-47 |
| Msa0140110 | Msa0589190 | 0.831739 | 1.407541e-55 | -8.615850e-47 |
| Msa0140110 | Msa0590650 | 0.830408 | 2.986977e-55 | -8.615850e-47 |
| Msa0140110 | Msa0600450 | 0.807000 | 6.259889e-50 | -8.615850e-47 |
| Msa0140110 | Msa0603540 | 0.803946 | 2.734991e-49 | -8.615850e-47 |
| Msa0140110 | Msa0603570 | 0.842141 | 3.099523e-58 | -8.615850e-47 |
| Msa0140110 | Msa0604290 | 0.833427 | 5.367573e-56 | -8.615850e-47 |
| Msa0140110 | Msa0608710 | 0.816007 | 6.902877e-52 | -8.615850e-47 |
| Msa0140110 | Msa0609410 | -0.802045 | 6.759073e-49 | -8.615850e-47 |
| Msa0140110 | Msa0610390 | 0.809194 | 2.134931e-50 | -8.615850e-47 |
| Msa0140110 | Msa0613920 | 0.805086 | 1.582207e-49 | -8.615850e-47 |
| Msa0140110 | Msa0630950 | 0.804673 | 1.929348e-49 | -8.615850e-47 |
| Msa0140110 | Msa0631350 | 0.824531 | 7.674944e-54 | -8.615850e-47 |
| Msa0140110 | Msa0640940 | 0.802740 | 4.860409e-49 | -8.615850e-47 |
| Msa0140110 | Msa0642970 | 0.833366 | 5.557151e-56 | -8.615850e-47 |
| Msa0140110 | Msa0649350 | 0.802227 | 6.201860e-49 | -8.615850e-47 |
| Msa0140110 | Msa0650190 | 0.807870 | 4.092341e-50 | -8.615850e-47 |
| Msa0140110 | Msa0650920 | 0.812364 | 4.401116e-51 | -8.615850e-47 |
| Msa0140110 | Msa0657120 | 0.804934 | 1.702239e-49 | -8.615850e-47 |
| Msa0140110 | Msa0661300 | 0.829626 | 4.633504e-55 | -8.615850e-47 |
| Msa0140110 | Msa0662630 | 0.835995 | 1.212428e-56 | -8.615850e-47 |
| Msa0140110 | Msa0663900 | 0.806671 | 7.345708e-50 | -8.615850e-47 |
| Msa0140110 | Msa0666270 | 0.810137 | 1.338613e-50 | -8.615850e-47 |
| Msa0140110 | Msa0673470 | 0.816637 | 4.990694e-52 | -8.615850e-47 |
| Msa0140110 | Msa0679360 | 0.808238 | 3.417297e-50 | -8.615850e-47 |
| Msa0140110 | Msa0682680 | 0.847133 | 1.401835e-59 | -8.615850e-47 |
| Msa0140110 | Msa0687630 | 0.811875 | 5.625198e-51 | -8.615850e-47 |
| Msa0140110 | Msa0689500 | 0.826502 | 2.618789e-54 | -8.615850e-47 |
| Msa0140110 | Msa0692840 | 0.824714 | 6.950371e-54 | -8.615850e-47 |
| Msa0140110 | Msa0692940 | 0.846273 | 2.408666e-59 | -8.615850e-47 |
| Msa0140110 | Msa0697940 | 0.812168 | 4.854901e-51 | -8.615850e-47 |
| Msa0140110 | Msa0698540 | 0.825490 | 4.557321e-54 | -8.615850e-47 |
| Msa0140110 | Msa0701100 | 0.827671 | 1.375810e-54 | -8.615850e-47 |
| Msa0140110 | Msa0706960 | 0.840182 | 1.014022e-57 | -8.615850e-47 |
| Msa0140110 | Msa0713820 | 0.816001 | 6.925259e-52 | -8.615850e-47 |
| Msa0140110 | Msa0722020 | 0.840241 | 9.787824e-58 | -8.615850e-47 |
| Msa0140110 | Msa0732880 | 0.804972 | 1.671518e-49 | -8.615850e-47 |
| Msa0140110 | Msa0737600 | 0.835176 | 1.954011e-56 | -8.615850e-47 |
| Msa0140110 | Msa0756060 | 0.814846 | 1.251310e-51 | -8.615850e-47 |
| Msa0140110 | Msa0763020 | 0.826307 | 2.915385e-54 | -8.615850e-47 |
| Msa0140110 | Msa0763070 | 0.829625 | 4.635139e-55 | -8.615850e-47 |
| Msa0140110 | Msa0771720 | 0.804588 | 2.010529e-49 | -8.615850e-47 |
| Msa0140110 | Msa0773850 | 0.804308 | 2.299077e-49 | -8.615850e-47 |
| Msa0140110 | Msa0800370 | 0.814483 | 1.505522e-51 | -8.615850e-47 |
| Msa0140110 | Msa0801110 | 0.838984 | 2.078245e-57 | -8.615850e-47 |
| Msa0140110 | Msa0805500 | 0.801437 | 9.006419e-49 | -8.615850e-47 |
| Msa0140110 | Msa0833310 | 0.815357 | 9.638208e-52 | -8.615850e-47 |
| Msa0140110 | Msa0835280 | 0.807760 | 4.317824e-50 | -8.615850e-47 |
| Msa0140110 | Msa0842830 | 0.850706 | 1.427788e-60 | -8.615850e-47 |
| Msa0140110 | Msa0847080 | 0.814134 | 1.798603e-51 | -8.615850e-47 |
| Msa0140110 | Msa0849030 | 0.801747 | 7.783414e-49 | -8.615850e-47 |
| Msa0140110 | Msa0851620 | 0.802280 | 6.045660e-49 | -8.615850e-47 |
| Msa0140110 | Msa0858440 | 0.806224 | 9.127152e-50 | -8.615850e-47 |
| Msa0140110 | Msa0861570 | 0.802685 | 4.990102e-49 | -8.615850e-47 |
| Msa0140110 | Msa0869120 | 0.815989 | 6.966264e-52 | -8.615850e-47 |
| Msa0140110 | Msa0872440 | 0.802587 | 5.228265e-49 | -8.615850e-47 |
| Msa0140110 | Msa0881270 | 0.820388 | 7.044131e-53 | -8.615850e-47 |
| Msa0140110 | Msa0930140 | 0.807240 | 5.567198e-50 | -8.615850e-47 |
| Msa0140110 | Msa0932830 | 0.813731 | 2.206379e-51 | -8.615850e-47 |
| Msa0140110 | Msa0942070 | 0.801496 | 8.761964e-49 | -8.615850e-47 |
| Msa0140110 | Msa0947800 | 0.814639 | 1.390355e-51 | -8.615850e-47 |
| Msa0140110 | Msa0963090 | -0.805103 | 1.569082e-49 | -8.615850e-47 |
| Msa0140110 | Msa0971020 | 0.840283 | 9.545246e-58 | -8.615850e-47 |
| Msa0140110 | Msa0974810 | 0.810053 | 1.395479e-50 | -8.615850e-47 |
| Msa0140110 | Msa0994370 | 0.802235 | 6.178213e-49 | -8.615850e-47 |
| Msa0140110 | Msa1006710 | 0.807922 | 3.988750e-50 | -8.615850e-47 |
| Msa0140110 | Msa1023180 | 0.852967 | 3.260003e-61 | -8.615850e-47 |
| Msa0140110 | Msa1023920 | 0.806377 | 8.471483e-50 | -8.615850e-47 |
| Msa0140110 | Msa1034150 | 0.822501 | 2.290343e-53 | -8.615850e-47 |
| Msa0140110 | Msa1037420 | 0.803419 | 3.517859e-49 | -8.615850e-47 |
| Msa0140110 | Msa1039900 | 0.808450 | 3.078181e-50 | -8.615850e-47 |
| Msa0140110 | Msa1043050 | 0.858401 | 8.452768e-63 | -8.615850e-47 |
| Msa0140110 | Msa1046020 | 0.836097 | 1.142608e-56 | -8.615850e-47 |
| Msa0140110 | Msa1046060 | 0.831456 | 1.652598e-55 | -8.615850e-47 |
| Msa0140110 | Msa1063510 | 0.800521 | 1.385874e-48 | -8.615850e-47 |
| Msa0140110 | Msa1071320 | 0.805617 | 1.224513e-49 | -8.615850e-47 |
| Msa0140110 | Msa1081930 | 0.816137 | 6.457392e-52 | -8.615850e-47 |
| Msa0140110 | Msa1089320 | 0.809355 | 1.971623e-50 | -8.615850e-47 |
| Msa0140110 | Msa1089840 | 0.806939 | 6.446953e-50 | -8.615850e-47 |
| Msa0140110 | Msa1091100 | 0.852098 | 5.767541e-61 | -8.615850e-47 |
| Msa0140110 | Msa1107160 | 0.800294 | 1.541540e-48 | -8.615850e-47 |
| Msa0140110 | Msa1107900 | 0.810017 | 1.420470e-50 | -8.615850e-47 |
| Msa0140110 | Msa1113670 | 0.803303 | 3.717521e-49 | -8.615850e-47 |
| Msa0140110 | Msa1126770 | 0.801475 | 8.849921e-49 | -8.615850e-47 |
| Msa0140110 | Msa1126830 | 0.829332 | 5.461172e-55 | -8.615850e-47 |
| Msa0140110 | Msa1130980 | 0.816796 | 4.597585e-52 | -8.615850e-47 |
| Msa0140110 | Msa1134090 | 0.848268 | 6.829015e-60 | -8.615850e-47 |
| Msa0140110 | Msa1150710 | 0.870314 | 1.602789e-66 | -8.615850e-47 |
| Msa0140110 | Msa1165780 | 0.819522 | 1.111081e-52 | -8.615850e-47 |
| Msa0140110 | Msa1165940 | 0.829846 | 4.095646e-55 | -8.615850e-47 |
| Msa0140110 | Msa1190930 | 0.818629 | 1.774095e-52 | -8.615850e-47 |
| Msa0140110 | Msa1199990 | 0.819561 | 1.088787e-52 | -8.615850e-47 |
| Msa0140110 | Msa1205590 | 0.815880 | 7.369166e-52 | -8.615850e-47 |
| Msa0140110 | Msa1208380 | 0.812425 | 4.266688e-51 | -8.615850e-47 |
| Msa0140110 | Msa1210020 | 0.801342 | 9.422652e-49 | -8.615850e-47 |
| Msa0140110 | Msa1233850 | 0.807279 | 5.462152e-50 | -8.615850e-47 |
| Msa0140110 | Msa1239910 | 0.831462 | 1.646710e-55 | -8.615850e-47 |
| Msa0140110 | Msa1244600 | 0.831906 | 1.279723e-55 | -8.615850e-47 |
| Msa0140110 | Msa1250530 | 0.817632 | 2.981962e-52 | -8.615850e-47 |
| Msa0140110 | Msa1254730 | 0.815643 | 8.323084e-52 | -8.615850e-47 |
| Msa0140110 | Msa1256470 | 0.836724 | 7.912510e-57 | -8.615850e-47 |
| Msa0140110 | Msa1269300 | 0.810165 | 1.320332e-50 | -8.615850e-47 |
| Msa0140110 | Msa1294820 | 0.801042 | 1.085068e-48 | -8.615850e-47 |
| Msa0140110 | Msa1296830 | 0.865464 | 5.796794e-65 | -8.615850e-47 |
| Msa0140110 | Msa1304820 | 0.812900 | 3.358984e-51 | -8.615850e-47 |
| Msa0140110 | Msa1310400 | 0.808400 | 3.155218e-50 | -8.615850e-47 |
| Msa0140110 | Msa1320390 | 0.810056 | 1.393229e-50 | -8.615850e-47 |
| Msa0140110 | Msa1329550 | 0.801527 | 8.632764e-49 | -8.615850e-47 |
| Msa0140110 | Msa1331350 | 0.803908 | 2.785321e-49 | -8.615850e-47 |
| Msa0140110 | Msa1336560 | 0.817304 | 3.533986e-52 | -8.615850e-47 |
| Msa0140110 | Msa1339190 | 0.806816 | 6.844022e-50 | -8.615850e-47 |
| Msa0140110 | Msa1343290 | 0.824065 | 9.875534e-54 | -8.615850e-47 |
| Msa0140110 | Msa1348850 | 0.813658 | 2.289699e-51 | -8.615850e-47 |
| Msa0140110 | Msa1362420 | 0.819044 | 1.428121e-52 | -8.615850e-47 |
| Msa0140110 | Msa1364210 | 0.811391 | 7.166377e-51 | -8.615850e-47 |
| Msa0140110 | Msa1364910 | 0.823827 | 1.123023e-53 | -8.615850e-47 |
| Msa0140110 | Msa1365800 | 0.815618 | 8.430700e-52 | -8.615850e-47 |
| Msa0140110 | Msa1367590 | 0.815447 | 9.203268e-52 | -8.615850e-47 |
| Msa0140110 | Msa1368120 | 0.800283 | 1.549934e-48 | -8.615850e-47 |
| Msa0140110 | Msa1368530 | 0.819493 | 1.128250e-52 | -8.615850e-47 |
| Msa0140110 | Msa1376650 | 0.830491 | 2.850440e-55 | -8.615850e-47 |
| Msa0140110 | Msa1382020 | 0.813265 | 2.794232e-51 | -8.615850e-47 |
| Msa0140110 | Msa1385770 | 0.833774 | 4.395248e-56 | -8.615850e-47 |
| Msa0140110 | Msa1393740 | 0.852690 | 3.911930e-61 | -8.615850e-47 |
| Msa0140110 | Msa1402420 | -0.807667 | 4.520074e-50 | -8.615850e-47 |
| Msa0140110 | Msa1403890 | 0.800049 | 1.729257e-48 | -8.615850e-47 |
| Msa0140110 | Msa1404010 | 0.834137 | 3.567085e-56 | -8.615850e-47 |
| Msa0140110 | Msa1404190 | 0.800159 | 1.642199e-48 | -8.615850e-47 |
| Msa0140110 | Msa1409240 | 0.833895 | 4.099651e-56 | -8.615850e-47 |
| Msa0140110 | Msa1418340 | 0.816700 | 4.831188e-52 | -8.615850e-47 |
| Msa0140110 | Msa1419640 | 0.834812 | 2.413563e-56 | -8.615850e-47 |
| Msa0140110 | Msa1420990 | 0.838130 | 3.453226e-57 | -8.615850e-47 |
| Msa0140110 | Msa1423910 | 0.840119 | 1.053133e-57 | -8.615850e-47 |
| Msa0140110 | Msa1428880 | 0.803913 | 2.777761e-49 | -8.615850e-47 |
| Msa0140110 | Msa1433390 | 0.801370 | 9.298350e-49 | -8.615850e-47 |
| Msa0140110 | Msa1434140 | 0.824817 | 6.571433e-54 | -8.615850e-47 |
| Msa0140110 | Msa1434420 | -0.839664 | 1.384424e-57 | -8.615850e-47 |
| Msa0140110 | Msa1435750 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
| Msa0140110 | Msa1444740 | 0.802352 | 5.843226e-49 | -8.615850e-47 |
| Msa0140110 | Msa1447890 | 0.838216 | 3.279807e-57 | -8.615850e-47 |
| Msa0140110 | Msa1448620 | 0.801404 | 9.148946e-49 | -8.615850e-47 |
| Msa0140110 | Msa1448630 | 0.850519 | 1.611567e-60 | -8.615850e-47 |
| Msa0140110 | Msa1451560 | 0.830048 | 3.657833e-55 | -8.615850e-47 |
| Msa0140110 | Msa1458290 | 0.800143 | 1.654839e-48 | -8.615850e-47 |
| Msa0140110 | Msa1459960 | 0.801779 | 7.666039e-49 | -8.615850e-47 |
| Msa0140110 | Msa1461280 | 0.831652 | 1.478499e-55 | -8.615850e-47 |
| Msa0140110 | Msa1462290 | 0.806482 | 8.052240e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140110 | MtrunA17_Chr3g0109351 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.26e-46 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0140110 | AT3G14430.1 | 65.079 | 63 | 21 | 1 | 9 | 71 | 15 | 76 | 1.08e-24 | 87.8 |
Find 36 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATACTCAGTTCTCAAATT+TGG | 0.144615 | 1_3:+74249745 | Msa0140110:three_prime_UTR |
| CAAACATCAATTCCTTTAAA+AGG | 0.150864 | 1_3:-74249395 | None:intergenic |
| TATCTTTCATGTCAAAGATA+TGG | 0.312816 | 1_3:-74249793 | None:intergenic |
| ATTTCTTACGAAGGCGAAAA+TGG | 0.322719 | 1_3:-74248246 | None:intergenic |
| GTTAATGTTACATTCTAGTT+AGG | 0.334854 | 1_3:+74249591 | Msa0140110:three_prime_UTR |
| ACAAATACTTGATTGTATTC+AGG | 0.336136 | 1_3:-74249340 | None:intergenic |
| GTATCTTTATGTAAGTTTGT+AGG | 0.358607 | 1_3:+74249534 | Msa0140110:three_prime_UTR |
| TTTGAGAACTGAGTATGAAT+AGG | 0.363509 | 1_3:-74249740 | None:intergenic |
| CTGGTGGTGGACCAGAGCTT+TGG | 0.389186 | 1_3:+74249371 | Msa0140110:CDS |
| CTTTAAAAGGGCCAAAGCTC+TGG | 0.402112 | 1_3:-74249382 | None:intergenic |
| TCTCATTCTATATCTCGTTT+CGG | 0.403988 | 1_3:+74249689 | Msa0140110:three_prime_UTR |
| ATCTCGTTTCGGTTTAGCTT+AGG | 0.404307 | 1_3:+74249700 | Msa0140110:three_prime_UTR |
| TGTCTGTCTCTATTTCAGAT+TGG | 0.429046 | 1_3:+74249657 | Msa0140110:three_prime_UTR |
| AAACATCAATTCCTTTAAAA+GGG | 0.443719 | 1_3:-74249394 | None:intergenic |
| TTGAGAACTGAGTATGAATA+GGG | 0.461008 | 1_3:-74249739 | None:intergenic |
| AAAGGAATTGATGTTTGGAC+AGG | 0.475928 | 1_3:+74249401 | Msa0140110:exon |
| CAAAGCTCTGGTCCACCACC+AGG | 0.488950 | 1_3:-74249370 | None:intergenic |
| CAAGTATTTGTGAAGAAGCC+TGG | 0.508253 | 1_3:+74249352 | Msa0140110:CDS |
| GACAGGTTGGACGTCATCCA+TGG | 0.522357 | 1_3:+74249418 | Msa0140110:three_prime_UTR |
| CATAAAGATACAAATACAAA+CGG | 0.528427 | 1_3:-74249522 | None:intergenic |
| CAGAGAGAAGAAGACTAGAC+TGG | 0.543222 | 1_3:+74248132 | Msa0140110:five_prime_UTR |
| GAATTGATGTTTGGACAGGT+TGG | 0.543485 | 1_3:+74249405 | Msa0140110:three_prime_UTR |
| AGCTTAGGAACAGAAATGCT+CGG | 0.563945 | 1_3:+74249715 | Msa0140110:three_prime_UTR |
| TGAAGAAGAAAAGAAAGAAG+AGG | 0.565354 | 1_3:-74248283 | None:intergenic |
| AGAGAACAGCGATGGCTAGA+CGG | 0.584999 | 1_3:+74248177 | Msa0140110:exon |
| CTAGACGGCGAGTCGAGACT+CGG | 0.585126 | 1_3:+74248192 | Msa0140110:CDS |
| GAAATATGTAAAATCATCAC+AGG | 0.585504 | 1_3:-74249500 | None:intergenic |
| AAAATATGTGAAATCATCAC+AGG | 0.600529 | 1_3:-74249459 | None:intergenic |
| GGAACGAGTCGTTATTGACT+CGG | 0.604165 | 1_3:+74248213 | Msa0140110:CDS |
| TTTGTGAAGAAGCCTGGTGG+TGG | 0.604245 | 1_3:+74249358 | Msa0140110:CDS |
| ATTAACATCATTCAAATCTG+TGG | 0.614330 | 1_3:-74249574 | None:intergenic |
| GAGGTGAGAGAGAACAGCGA+TGG | 0.620676 | 1_3:+74248169 | Msa0140110:exon |
| AAACTCAGCATTTCTTACGA+AGG | 0.638252 | 1_3:-74248255 | None:intergenic |
| GCGTGCTTAGAATACCTCCA+TGG | 0.702615 | 1_3:-74249435 | None:intergenic |
| AGGTTGGACGTCATCCATGG+AGG | 0.746774 | 1_3:+74249421 | Msa0140110:three_prime_UTR |
| GTATTTGTGAAGAAGCCTGG+TGG | 0.787083 | 1_3:+74249355 | Msa0140110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGGATAATTATATCAAAA+AGG | + | chr1_3:74248519-74248538 | Msa0140110:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr1_3:74248889-74248908 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr1_3:74248790-74248809 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr1_3:74248889-74248908 | Msa0140110:intron | 15.0% |
| !!! | TTTTGATAAGTGAATATTTT+TGG | + | chr1_3:74249197-74249216 | Msa0140110:intron | 15.0% |
| !! | ATTGGATAATTATATCAAAA+AGG | + | chr1_3:74248519-74248538 | Msa0140110:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr1_3:74248889-74248908 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr1_3:74248790-74248809 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr1_3:74248889-74248908 | Msa0140110:intron | 15.0% |
| !!! | TTTTGATAAGTGAATATTTT+TGG | + | chr1_3:74249197-74249216 | Msa0140110:intron | 15.0% |
| !! | ACAAAAAAAAAAAAAGAGAG+AGG | - | chr1_3:74248346-74248365 | None:intergenic | 20.0% |
| !!! | CTTTTAATGTTTGAGAAATT+AGG | + | chr1_3:74248435-74248454 | Msa0140110:intron | 20.0% |
| !! | TTAGTTACTAAATTGAAAAC+TGG | + | chr1_3:74248485-74248504 | Msa0140110:intron | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | chr1_3:74249170-74249189 | Msa0140110:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | chr1_3:74249174-74249193 | Msa0140110:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | chr1_3:74249397-74249416 | None:intergenic | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | chr1_3:74249525-74249544 | None:intergenic | 20.0% |
| !! | ACAAAAAAAAAAAAAGAGAG+AGG | - | chr1_3:74248346-74248365 | None:intergenic | 20.0% |
| !!! | CTTTTAATGTTTGAGAAATT+AGG | + | chr1_3:74248435-74248454 | Msa0140110:intron | 20.0% |
| !! | TTAGTTACTAAATTGAAAAC+TGG | + | chr1_3:74248485-74248504 | Msa0140110:intron | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | chr1_3:74249170-74249189 | Msa0140110:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | chr1_3:74249174-74249193 | Msa0140110:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | chr1_3:74249397-74249416 | None:intergenic | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | chr1_3:74249525-74249544 | None:intergenic | 20.0% |
| ! | TTTGAACAAATGATGCAAAT+GGG | - | chr1_3:74248381-74248400 | None:intergenic | 25.0% |
| ! | ATTTGAACAAATGATGCAAA+TGG | - | chr1_3:74248382-74248401 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATC+TGG | + | chr1_3:74248399-74248418 | Msa0140110:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATCT+GGG | + | chr1_3:74248400-74248419 | Msa0140110:intron | 25.0% |
| ! | AACTATATACCAATTCCAAT+TGG | - | chr1_3:74248559-74248578 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr1_3:74248815-74248834 | Msa0140110:intron | 25.0% |
| ! | ATGTATGTGGTACATATTTA+TGG | - | chr1_3:74248842-74248861 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr1_3:74248815-74248834 | None:intergenic | 25.0% |
| ! | TTAAATTACAATCAGCATGT+TGG | + | chr1_3:74248970-74248989 | Msa0140110:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr1_3:74249095-74249114 | Msa0140110:intron | 25.0% |
| !! | TTGTCTTGTAATTTCACTTT+TGG | + | chr1_3:74249272-74249291 | Msa0140110:intron | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | chr1_3:74249343-74249362 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | chr1_3:74249398-74249417 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | chr1_3:74249396-74249415 | Msa0140110:exon | 25.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | chr1_3:74249462-74249481 | None:intergenic | 25.0% |
| ! | GAAATATGTAAAATCATCAC+AGG | - | chr1_3:74249503-74249522 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | chr1_3:74249534-74249553 | Msa0140110:three_prime_UTR | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | chr1_3:74249577-74249596 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | chr1_3:74249591-74249610 | Msa0140110:three_prime_UTR | 25.0% |
| ! | TATCTTTCATGTCAAAGATA+TGG | - | chr1_3:74249796-74249815 | None:intergenic | 25.0% |
| ! | TTTGAACAAATGATGCAAAT+GGG | - | chr1_3:74248381-74248400 | None:intergenic | 25.0% |
| ! | ATTTGAACAAATGATGCAAA+TGG | - | chr1_3:74248382-74248401 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATC+TGG | + | chr1_3:74248399-74248418 | Msa0140110:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATCT+GGG | + | chr1_3:74248400-74248419 | Msa0140110:intron | 25.0% |
| ! | AACTATATACCAATTCCAAT+TGG | - | chr1_3:74248559-74248578 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr1_3:74248815-74248834 | Msa0140110:intron | 25.0% |
| ! | ATGTATGTGGTACATATTTA+TGG | - | chr1_3:74248842-74248861 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr1_3:74248815-74248834 | None:intergenic | 25.0% |
| ! | TTAAATTACAATCAGCATGT+TGG | + | chr1_3:74248970-74248989 | Msa0140110:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr1_3:74249095-74249114 | Msa0140110:intron | 25.0% |
| !! | TTGTCTTGTAATTTCACTTT+TGG | + | chr1_3:74249272-74249291 | Msa0140110:intron | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | chr1_3:74249343-74249362 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | chr1_3:74249398-74249417 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | chr1_3:74249396-74249415 | Msa0140110:exon | 25.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | chr1_3:74249462-74249481 | None:intergenic | 25.0% |
| ! | GAAATATGTAAAATCATCAC+AGG | - | chr1_3:74249503-74249522 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | chr1_3:74249534-74249553 | Msa0140110:three_prime_UTR | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | chr1_3:74249577-74249596 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | chr1_3:74249591-74249610 | Msa0140110:three_prime_UTR | 25.0% |
| ! | TATCTTTCATGTCAAAGATA+TGG | - | chr1_3:74249796-74249815 | None:intergenic | 25.0% |
| ! | ACTGGATTGTTAGAATTTTG+AGG | + | chr1_3:74248150-74248169 | Msa0140110:five_prime_UTR | 30.0% |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | chr1_3:74248286-74248305 | None:intergenic | 30.0% | |
| ATTCTGTTTCCAATTGGAAT+TGG | + | chr1_3:74248547-74248566 | Msa0140110:intron | 30.0% | |
| ACTGATGAAAACAACTTACA+AGG | - | chr1_3:74248725-74248744 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr1_3:74248893-74248912 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr1_3:74248892-74248911 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr1_3:74248892-74248911 | Msa0140110:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr1_3:74248893-74248912 | Msa0140110:intron | 30.0% |
| TGAAATTACAAGACAAACAG+AGG | - | chr1_3:74249268-74249287 | None:intergenic | 30.0% | |
| TCTCATTCTATATCTCGTTT+CGG | + | chr1_3:74249689-74249708 | Msa0140110:three_prime_UTR | 30.0% | |
| TTGAGAACTGAGTATGAATA+GGG | - | chr1_3:74249742-74249761 | None:intergenic | 30.0% | |
| TTTGAGAACTGAGTATGAAT+AGG | - | chr1_3:74249743-74249762 | None:intergenic | 30.0% | |
| TCATACTCAGTTCTCAAATT+TGG | + | chr1_3:74249745-74249764 | Msa0140110:three_prime_UTR | 30.0% | |
| ! | ACTGGATTGTTAGAATTTTG+AGG | + | chr1_3:74248150-74248169 | Msa0140110:five_prime_UTR | 30.0% |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | chr1_3:74248286-74248305 | None:intergenic | 30.0% | |
| ATTCTGTTTCCAATTGGAAT+TGG | + | chr1_3:74248547-74248566 | Msa0140110:intron | 30.0% | |
| ACTGATGAAAACAACTTACA+AGG | - | chr1_3:74248725-74248744 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr1_3:74248893-74248912 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr1_3:74248892-74248911 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr1_3:74248892-74248911 | Msa0140110:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr1_3:74248893-74248912 | Msa0140110:intron | 30.0% |
| TGAAATTACAAGACAAACAG+AGG | - | chr1_3:74249268-74249287 | None:intergenic | 30.0% | |
| TCTCATTCTATATCTCGTTT+CGG | + | chr1_3:74249689-74249708 | Msa0140110:three_prime_UTR | 30.0% | |
| TTGAGAACTGAGTATGAATA+GGG | - | chr1_3:74249742-74249761 | None:intergenic | 30.0% | |
| TTTGAGAACTGAGTATGAAT+AGG | - | chr1_3:74249743-74249762 | None:intergenic | 30.0% | |
| TCATACTCAGTTCTCAAATT+TGG | + | chr1_3:74249745-74249764 | Msa0140110:three_prime_UTR | 30.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | chr1_3:74248249-74248268 | None:intergenic | 35.0% | |
| AAACTCAGCATTTCTTACGA+AGG | - | chr1_3:74248258-74248277 | None:intergenic | 35.0% | |
| !! | AAACTGGTTTGACGATTGAT+TGG | + | chr1_3:74248501-74248520 | Msa0140110:intron | 35.0% |
| GTAGAGATTCTGTTTCCAAT+TGG | + | chr1_3:74248541-74248560 | Msa0140110:intron | 35.0% | |
| GATTACGAGTCTGTTTGAAT+TGG | - | chr1_3:74248947-74248966 | None:intergenic | 35.0% | |
| ATTACAAGACAAACAGAGGA+GGG | - | chr1_3:74249264-74249283 | None:intergenic | 35.0% | |
| AATTACAAGACAAACAGAGG+AGG | - | chr1_3:74249265-74249284 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | chr1_3:74249401-74249420 | Msa0140110:exon | 35.0% | |
| TGTCTGTCTCTATTTCAGAT+TGG | + | chr1_3:74249657-74249676 | Msa0140110:three_prime_UTR | 35.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | chr1_3:74248249-74248268 | None:intergenic | 35.0% | |
| AAACTCAGCATTTCTTACGA+AGG | - | chr1_3:74248258-74248277 | None:intergenic | 35.0% | |
| !! | AAACTGGTTTGACGATTGAT+TGG | + | chr1_3:74248501-74248520 | Msa0140110:intron | 35.0% |
| GTAGAGATTCTGTTTCCAAT+TGG | + | chr1_3:74248541-74248560 | Msa0140110:intron | 35.0% | |
| GATTACGAGTCTGTTTGAAT+TGG | - | chr1_3:74248947-74248966 | None:intergenic | 35.0% | |
| ATTACAAGACAAACAGAGGA+GGG | - | chr1_3:74249264-74249283 | None:intergenic | 35.0% | |
| AATTACAAGACAAACAGAGG+AGG | - | chr1_3:74249265-74249284 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | chr1_3:74249401-74249420 | Msa0140110:exon | 35.0% | |
| TGTCTGTCTCTATTTCAGAT+TGG | + | chr1_3:74249657-74249676 | Msa0140110:three_prime_UTR | 35.0% | |
| !!! | ACAATCAGCATGTTGGCTTT+TGG | + | chr1_3:74248977-74248996 | Msa0140110:intron | 40.0% |
| TGGTGTATCATGTGTGAACA+CGG | + | chr1_3:74248997-74249016 | Msa0140110:intron | 40.0% | |
| TTCTCAAATTAGGTGTGTCC+CGG | - | chr1_3:74249141-74249160 | None:intergenic | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | chr1_3:74249352-74249371 | Msa0140110:CDS | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | chr1_3:74249405-74249424 | Msa0140110:three_prime_UTR | 40.0% | |
| ! | ATCTCGTTTCGGTTTAGCTT+AGG | + | chr1_3:74249700-74249719 | Msa0140110:three_prime_UTR | 40.0% |
| AGCTTAGGAACAGAAATGCT+CGG | + | chr1_3:74249715-74249734 | Msa0140110:three_prime_UTR | 40.0% | |
| !!! | ACAATCAGCATGTTGGCTTT+TGG | + | chr1_3:74248977-74248996 | Msa0140110:intron | 40.0% |
| TGGTGTATCATGTGTGAACA+CGG | + | chr1_3:74248997-74249016 | Msa0140110:intron | 40.0% | |
| TTCTCAAATTAGGTGTGTCC+CGG | - | chr1_3:74249141-74249160 | None:intergenic | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | chr1_3:74249352-74249371 | Msa0140110:CDS | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | chr1_3:74249405-74249424 | Msa0140110:three_prime_UTR | 40.0% | |
| ! | ATCTCGTTTCGGTTTAGCTT+AGG | + | chr1_3:74249700-74249719 | Msa0140110:three_prime_UTR | 40.0% |
| AGCTTAGGAACAGAAATGCT+CGG | + | chr1_3:74249715-74249734 | Msa0140110:three_prime_UTR | 40.0% | |
| CAGAGAGAAGAAGACTAGAC+TGG | + | chr1_3:74248132-74248151 | Msa0140110:five_prime_UTR | 45.0% | |
| ! | GGAACGAGTCGTTATTGACT+CGG | + | chr1_3:74248213-74248232 | Msa0140110:CDS | 45.0% |
| ! | TTGAAACGGAGGGAGTATGT+CGG | + | chr1_3:74248903-74248922 | Msa0140110:intron | 45.0% |
| TGCAGACATCAGACACGAAA+CGG | + | chr1_3:74249027-74249046 | Msa0140110:intron | 45.0% | |
| GCACGCACACTTCTCAAATT+AGG | - | chr1_3:74249151-74249170 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | chr1_3:74249355-74249374 | Msa0140110:CDS | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | chr1_3:74249385-74249404 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | chr1_3:74249383-74249402 | Msa0140110:CDS | 45.0% |
| CAGAGAGAAGAAGACTAGAC+TGG | + | chr1_3:74248132-74248151 | Msa0140110:five_prime_UTR | 45.0% | |
| ! | GGAACGAGTCGTTATTGACT+CGG | + | chr1_3:74248213-74248232 | Msa0140110:CDS | 45.0% |
| ! | TTGAAACGGAGGGAGTATGT+CGG | + | chr1_3:74248903-74248922 | Msa0140110:intron | 45.0% |
| TGCAGACATCAGACACGAAA+CGG | + | chr1_3:74249027-74249046 | Msa0140110:intron | 45.0% | |
| GCACGCACACTTCTCAAATT+AGG | - | chr1_3:74249151-74249170 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | chr1_3:74249355-74249374 | Msa0140110:CDS | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | chr1_3:74249385-74249404 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | chr1_3:74249383-74249402 | Msa0140110:CDS | 45.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | chr1_3:74249070-74249089 | None:intergenic | 5.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | chr1_3:74249070-74249089 | None:intergenic | 5.0% |
| AGAGAACAGCGATGGCTAGA+CGG | + | chr1_3:74248177-74248196 | Msa0140110:exon | 50.0% | |
| ATCATGTGTGAACACGGACG+CGG | + | chr1_3:74249003-74249022 | Msa0140110:intron | 50.0% | |
| CATCAGACACGAAACGGACA+TGG | + | chr1_3:74249033-74249052 | Msa0140110:intron | 50.0% | |
| !! | CATATGTGTCGGTGTCGTGT+TGG | + | chr1_3:74249106-74249125 | Msa0140110:intron | 50.0% |
| AATTAGGTGTGTCCCGGTGT+CGG | - | chr1_3:74249135-74249154 | None:intergenic | 50.0% | |
| AAGACAAACAGAGGAGGGAG+CGG | - | chr1_3:74249259-74249278 | None:intergenic | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | chr1_3:74249358-74249377 | Msa0140110:CDS | 50.0% | |
| GCGTGCTTAGAATACCTCCA+TGG | - | chr1_3:74249438-74249457 | None:intergenic | 50.0% | |
| AGAGAACAGCGATGGCTAGA+CGG | + | chr1_3:74248177-74248196 | Msa0140110:exon | 50.0% | |
| ATCATGTGTGAACACGGACG+CGG | + | chr1_3:74249003-74249022 | Msa0140110:intron | 50.0% | |
| CATCAGACACGAAACGGACA+TGG | + | chr1_3:74249033-74249052 | Msa0140110:intron | 50.0% | |
| !! | CATATGTGTCGGTGTCGTGT+TGG | + | chr1_3:74249106-74249125 | Msa0140110:intron | 50.0% |
| AATTAGGTGTGTCCCGGTGT+CGG | - | chr1_3:74249135-74249154 | None:intergenic | 50.0% | |
| AAGACAAACAGAGGAGGGAG+CGG | - | chr1_3:74249259-74249278 | None:intergenic | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | chr1_3:74249358-74249377 | Msa0140110:CDS | 50.0% | |
| GCGTGCTTAGAATACCTCCA+TGG | - | chr1_3:74249438-74249457 | None:intergenic | 50.0% | |
| GAGGTGAGAGAGAACAGCGA+TGG | + | chr1_3:74248169-74248188 | Msa0140110:exon | 55.0% | |
| AGACAAACAGAGGAGGGAGC+GGG | - | chr1_3:74249258-74249277 | None:intergenic | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | chr1_3:74249418-74249437 | Msa0140110:three_prime_UTR | 55.0% |
| AGGTTGGACGTCATCCATGG+AGG | + | chr1_3:74249421-74249440 | Msa0140110:three_prime_UTR | 55.0% | |
| GAGGTGAGAGAGAACAGCGA+TGG | + | chr1_3:74248169-74248188 | Msa0140110:exon | 55.0% | |
| AGACAAACAGAGGAGGGAGC+GGG | - | chr1_3:74249258-74249277 | None:intergenic | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | chr1_3:74249418-74249437 | Msa0140110:three_prime_UTR | 55.0% |
| AGGTTGGACGTCATCCATGG+AGG | + | chr1_3:74249421-74249440 | Msa0140110:three_prime_UTR | 55.0% | |
| CTAGACGGCGAGTCGAGACT+CGG | + | chr1_3:74248192-74248211 | Msa0140110:CDS | 60.0% | |
| ! | GTCGTGTTGGTGTCCGACAC+CGG | + | chr1_3:74249119-74249138 | Msa0140110:intron | 60.0% |
| ! | TCGTGTTGGTGTCCGACACC+GGG | + | chr1_3:74249120-74249139 | Msa0140110:intron | 60.0% |
| ACAAACAGAGGAGGGAGCGG+GGG | - | chr1_3:74249256-74249275 | None:intergenic | 60.0% | |
| GACAAACAGAGGAGGGAGCG+GGG | - | chr1_3:74249257-74249276 | None:intergenic | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | chr1_3:74249373-74249392 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | chr1_3:74249371-74249390 | Msa0140110:CDS | 60.0% |
| CTAGACGGCGAGTCGAGACT+CGG | + | chr1_3:74248192-74248211 | Msa0140110:CDS | 60.0% | |
| ! | GTCGTGTTGGTGTCCGACAC+CGG | + | chr1_3:74249119-74249138 | Msa0140110:intron | 60.0% |
| ! | TCGTGTTGGTGTCCGACACC+GGG | + | chr1_3:74249120-74249139 | Msa0140110:intron | 60.0% |
| ACAAACAGAGGAGGGAGCGG+GGG | - | chr1_3:74249256-74249275 | None:intergenic | 60.0% | |
| GACAAACAGAGGAGGGAGCG+GGG | - | chr1_3:74249257-74249276 | None:intergenic | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | chr1_3:74249373-74249392 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | chr1_3:74249371-74249390 | Msa0140110:CDS | 60.0% |
| AACAGAGGAGGGAGCGGGGG+TGG | - | chr1_3:74249253-74249272 | None:intergenic | 70.0% | |
| AACAGAGGAGGGAGCGGGGG+TGG | - | chr1_3:74249253-74249272 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 74248120 | 74249854 | 74248120 | ID=Msa0140110;Name=Msa0140110 |
| chr1_3 | mRNA | 74248120 | 74249854 | 74248120 | ID=Msa0140110-mRNA-1;Parent=Msa0140110;Name=Msa0140110-mRNA-1;_AED=0.02;_eAED=0.02;_QI=68|1|1|1|1|1|2|452|71 |
| chr1_3 | exon | 74248120 | 74248331 | 74248120 | ID=Msa0140110-mRNA-1:exon:25786;Parent=Msa0140110-mRNA-1 |
| chr1_3 | exon | 74249331 | 74249854 | 74249331 | ID=Msa0140110-mRNA-1:exon:25787;Parent=Msa0140110-mRNA-1 |
| chr1_3 | five_prime_UTR | 74248120 | 74248187 | 74248120 | ID=Msa0140110-mRNA-1:five_prime_utr;Parent=Msa0140110-mRNA-1 |
| chr1_3 | CDS | 74248188 | 74248331 | 74248188 | ID=Msa0140110-mRNA-1:cds;Parent=Msa0140110-mRNA-1 |
| chr1_3 | CDS | 74249331 | 74249402 | 74249331 | ID=Msa0140110-mRNA-1:cds;Parent=Msa0140110-mRNA-1 |
| chr1_3 | three_prime_UTR | 74249403 | 74249854 | 74249403 | ID=Msa0140110-mRNA-1:three_prime_utr;Parent=Msa0140110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
