Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0485850 | XP_003600586.1 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.46e-42 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0485850 | G7J780 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 1.17e-42 | 142 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa0485850 | 0.821647 | 3.612645e-53 | -8.615850e-47 |
| Msa0004840 | Msa0485850 | 0.803338 | 3.657112e-49 | -8.615850e-47 |
| Msa0008090 | Msa0485850 | 0.831147 | 1.968120e-55 | -8.615850e-47 |
| Msa0008410 | Msa0485850 | 0.802225 | 6.206419e-49 | -8.615850e-47 |
| Msa0008840 | Msa0485850 | 0.807753 | 4.333280e-50 | -8.615850e-47 |
| Msa0020390 | Msa0485850 | 0.842632 | 2.296258e-58 | -8.615850e-47 |
| Msa0023000 | Msa0485850 | 0.807887 | 4.057724e-50 | -8.615850e-47 |
| Msa0029260 | Msa0485850 | 0.803138 | 4.021890e-49 | -8.615850e-47 |
| Msa0032260 | Msa0485850 | 0.800830 | 1.199041e-48 | -8.615850e-47 |
| Msa0037840 | Msa0485850 | 0.809147 | 2.184941e-50 | -8.615850e-47 |
| Msa0038870 | Msa0485850 | 0.807792 | 4.251802e-50 | -8.615850e-47 |
| Msa0046740 | Msa0485850 | 0.807880 | 4.072200e-50 | -8.615850e-47 |
| Msa0047980 | Msa0485850 | 0.827952 | 1.177376e-54 | -8.615850e-47 |
| Msa0056470 | Msa0485850 | 0.817532 | 3.140005e-52 | -8.615850e-47 |
| Msa0057750 | Msa0485850 | 0.803021 | 4.252083e-49 | -8.615850e-47 |
| Msa0064350 | Msa0485850 | 0.829896 | 3.981517e-55 | -8.615850e-47 |
| Msa0065950 | Msa0485850 | 0.802721 | 4.904244e-49 | -8.615850e-47 |
| Msa0068020 | Msa0485850 | 0.827823 | 1.264192e-54 | -8.615850e-47 |
| Msa0084940 | Msa0485850 | 0.815858 | 7.451475e-52 | -8.615850e-47 |
| Msa0090550 | Msa0485850 | 0.800933 | 1.142344e-48 | -8.615850e-47 |
| Msa0091610 | Msa0485850 | 0.813257 | 2.805639e-51 | -8.615850e-47 |
| Msa0093010 | Msa0485850 | 0.811346 | 7.330659e-51 | -8.615850e-47 |
| Msa0093420 | Msa0485850 | 0.808784 | 2.612210e-50 | -8.615850e-47 |
| Msa0096980 | Msa0485850 | 0.812000 | 5.284420e-51 | -8.615850e-47 |
| Msa0103070 | Msa0485850 | 0.807185 | 5.719022e-50 | -8.615850e-47 |
| Msa0115370 | Msa0485850 | 0.811161 | 8.040984e-51 | -8.615850e-47 |
| Msa0115390 | Msa0485850 | 0.819336 | 1.225305e-52 | -8.615850e-47 |
| Msa0115990 | Msa0485850 | 0.814783 | 1.292178e-51 | -8.615850e-47 |
| Msa0118540 | Msa0485850 | 0.804478 | 2.118955e-49 | -8.615850e-47 |
| Msa0121820 | Msa0485850 | 0.814241 | 1.702697e-51 | -8.615850e-47 |
| Msa0125450 | Msa0485850 | 0.812633 | 3.842920e-51 | -8.615850e-47 |
| Msa0125540 | Msa0485850 | 0.813831 | 2.097553e-51 | -8.615850e-47 |
| Msa0137820 | Msa0485850 | 0.822752 | 2.002653e-53 | -8.615850e-47 |
| Msa0140110 | Msa0485850 | 0.991608 | 1.461938e-188 | -8.615850e-47 |
| Msa0140650 | Msa0485850 | 0.834303 | 3.240166e-56 | -8.615850e-47 |
| Msa0140820 | Msa0485850 | 0.801718 | 7.887535e-49 | -8.615850e-47 |
| Msa0145010 | Msa0485850 | 0.809358 | 1.968720e-50 | -8.615850e-47 |
| Msa0159420 | Msa0485850 | 0.803123 | 4.050949e-49 | -8.615850e-47 |
| Msa0162130 | Msa0485850 | 0.801194 | 1.010370e-48 | -8.615850e-47 |
| Msa0166750 | Msa0485850 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
| Msa0169300 | Msa0485850 | 0.801619 | 8.266067e-49 | -8.615850e-47 |
| Msa0174770 | Msa0485850 | 0.806180 | 9.324340e-50 | -8.615850e-47 |
| Msa0183460 | Msa0485850 | 0.829846 | 4.095646e-55 | -8.615850e-47 |
| Msa0183870 | Msa0485850 | 0.817205 | 3.720900e-52 | -8.615850e-47 |
| Msa0189520 | Msa0485850 | 0.826388 | 2.788749e-54 | -8.615850e-47 |
| Msa0190120 | Msa0485850 | 0.822035 | 2.937947e-53 | -8.615850e-47 |
| Msa0190590 | Msa0485850 | 0.809167 | 2.163007e-50 | -8.615850e-47 |
| Msa0191050 | Msa0485850 | 0.816705 | 4.818640e-52 | -8.615850e-47 |
| Msa0191440 | Msa0485850 | 0.813196 | 2.892699e-51 | -8.615850e-47 |
| Msa0194480 | Msa0485850 | 0.865132 | 7.368662e-65 | -8.615850e-47 |
| Msa0199690 | Msa0485850 | 0.843251 | 1.571422e-58 | -8.615850e-47 |
| Msa0199880 | Msa0485850 | 0.816387 | 5.676122e-52 | -8.615850e-47 |
| Msa0209350 | Msa0485850 | 0.803500 | 3.385103e-49 | -8.615850e-47 |
| Msa0220250 | Msa0485850 | 0.804316 | 2.290076e-49 | -8.615850e-47 |
| Msa0231790 | Msa0485850 | 0.825476 | 4.590612e-54 | -8.615850e-47 |
| Msa0231980 | Msa0485850 | 0.808889 | 2.480340e-50 | -8.615850e-47 |
| Msa0232050 | Msa0485850 | 0.807115 | 5.917297e-50 | -8.615850e-47 |
| Msa0233350 | Msa0485850 | 0.821665 | 3.578896e-53 | -8.615850e-47 |
| Msa0236270 | Msa0485850 | 0.849873 | 2.445264e-60 | -8.615850e-47 |
| Msa0366890 | Msa0485850 | 0.801182 | 1.015821e-48 | -8.615850e-47 |
| Msa0375980 | Msa0485850 | 0.825506 | 4.516807e-54 | -8.615850e-47 |
| Msa0376300 | Msa0485850 | 0.806423 | 8.287058e-50 | -8.615850e-47 |
| Msa0376310 | Msa0485850 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0376690 | Msa0485850 | 0.841709 | 4.031252e-58 | -8.615850e-47 |
| Msa0378490 | Msa0485850 | 0.829853 | 4.079504e-55 | -8.615850e-47 |
| Msa0380300 | Msa0485850 | 0.824141 | 9.480249e-54 | -8.615850e-47 |
| Msa0385500 | Msa0485850 | 0.815555 | 8.706327e-52 | -8.615850e-47 |
| Msa0391690 | Msa0485850 | 0.826005 | 3.439576e-54 | -8.615850e-47 |
| Msa0414800 | Msa0485850 | 0.814798 | 1.282251e-51 | -8.615850e-47 |
| Msa0415430 | Msa0485850 | 0.994195 | 2.608408e-205 | -8.615850e-47 |
| Msa0458060 | Msa0485850 | 0.815366 | 9.591178e-52 | -8.615850e-47 |
| Msa0460100 | Msa0485850 | 0.800316 | 1.526328e-48 | -8.615850e-47 |
| Msa0465550 | Msa0485850 | 0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0469850 | Msa0485850 | 0.810270 | 1.252921e-50 | -8.615850e-47 |
| Msa0471590 | Msa0485850 | 0.859537 | 3.863443e-63 | -8.615850e-47 |
| Msa0477080 | Msa0485850 | 0.808500 | 3.004774e-50 | -8.615850e-47 |
| Msa0479270 | Msa0485850 | 0.803340 | 3.653562e-49 | -8.615850e-47 |
| Msa0481480 | Msa0485850 | 0.830233 | 3.296228e-55 | -8.615850e-47 |
| Msa0481810 | Msa0485850 | 0.856727 | 2.646206e-62 | -8.615850e-47 |
| Msa0257490 | Msa0485850 | 0.819655 | 1.036489e-52 | -8.615850e-47 |
| Msa0261550 | Msa0485850 | 0.801632 | 8.215948e-49 | -8.615850e-47 |
| Msa0261720 | Msa0485850 | 0.806900 | 6.570550e-50 | -8.615850e-47 |
| Msa0266360 | Msa0485850 | 0.801661 | 8.105391e-49 | -8.615850e-47 |
| Msa0267970 | Msa0485850 | 0.800696 | 1.276835e-48 | -8.615850e-47 |
| Msa0269470 | Msa0485850 | 0.819831 | 9.446813e-53 | -8.615850e-47 |
| Msa0271360 | Msa0485850 | 0.806603 | 7.591749e-50 | -8.615850e-47 |
| Msa0271890 | Msa0485850 | 0.821963 | 3.052641e-53 | -8.615850e-47 |
| Msa0280430 | Msa0485850 | 0.826354 | 2.841263e-54 | -8.615850e-47 |
| Msa0284820 | Msa0485850 | 0.826395 | 2.777230e-54 | -8.615850e-47 |
| Msa0296790 | Msa0485850 | 0.815779 | 7.760477e-52 | -8.615850e-47 |
| Msa0296920 | Msa0485850 | 0.843276 | 1.548151e-58 | -8.615850e-47 |
| Msa0298700 | Msa0485850 | 0.822562 | 2.217251e-53 | -8.615850e-47 |
| Msa0300120 | Msa0485850 | 0.809472 | 1.860753e-50 | -8.615850e-47 |
| Msa0304590 | Msa0485850 | 0.840088 | 1.073245e-57 | -8.615850e-47 |
| Msa0304660 | Msa0485850 | 0.839360 | 1.660137e-57 | -8.615850e-47 |
| Msa0309880 | Msa0485850 | 0.809284 | 2.041570e-50 | -8.615850e-47 |
| Msa0310860 | Msa0485850 | 0.824866 | 6.398443e-54 | -8.615850e-47 |
| Msa0311700 | Msa0485850 | 0.806677 | 7.323462e-50 | -8.615850e-47 |
| Msa0314720 | Msa0485850 | 0.822396 | 2.422073e-53 | -8.615850e-47 |
| Msa0315850 | Msa0485850 | 0.815395 | 9.449948e-52 | -8.615850e-47 |
| Msa0323560 | Msa0485850 | 0.804993 | 1.654115e-49 | -8.615850e-47 |
| Msa0331700 | Msa0485850 | 0.838355 | 3.020981e-57 | -8.615850e-47 |
| Msa0337060 | Msa0485850 | 0.806922 | 6.499329e-50 | -8.615850e-47 |
| Msa0346430 | Msa0485850 | 0.826753 | 2.281947e-54 | -8.615850e-47 |
| Msa0359560 | Msa0485850 | 0.821600 | 3.703361e-53 | -8.615850e-47 |
| Msa0484740 | Msa0485850 | 0.812689 | 3.737121e-51 | -8.615850e-47 |
| Msa0485850 | Msa0489610 | 0.810983 | 8.786062e-51 | -8.615850e-47 |
| Msa0485850 | Msa0508590 | 0.803386 | 3.573249e-49 | -8.615850e-47 |
| Msa0485850 | Msa0508630 | 0.801022 | 1.095279e-48 | -8.615850e-47 |
| Msa0485850 | Msa0520790 | 0.815522 | 8.853714e-52 | -8.615850e-47 |
| Msa0485850 | Msa0524500 | 0.816017 | 6.867215e-52 | -8.615850e-47 |
| Msa0485850 | Msa0534410 | 0.814732 | 1.326469e-51 | -8.615850e-47 |
| Msa0485850 | Msa0534900 | 0.824189 | 9.235537e-54 | -8.615850e-47 |
| Msa0485850 | Msa0542560 | 0.813238 | 2.832563e-51 | -8.615850e-47 |
| Msa0485850 | Msa0547160 | 0.829490 | 5.000862e-55 | -8.615850e-47 |
| Msa0485850 | Msa0552810 | 0.829640 | 4.596067e-55 | -8.615850e-47 |
| Msa0485850 | Msa0556060 | 0.812461 | 4.191656e-51 | -8.615850e-47 |
| Msa0485850 | Msa0557480 | 0.817336 | 3.476692e-52 | -8.615850e-47 |
| Msa0485850 | Msa0580230 | 0.803554 | 3.298699e-49 | -8.615850e-47 |
| Msa0485850 | Msa0580280 | 0.815655 | 8.273249e-52 | -8.615850e-47 |
| Msa0485850 | Msa0581070 | 0.821654 | 3.598854e-53 | -8.615850e-47 |
| Msa0485850 | Msa0581110 | 0.823452 | 1.374813e-53 | -8.615850e-47 |
| Msa0485850 | Msa0588240 | 0.804883 | 1.744525e-49 | -8.615850e-47 |
| Msa0485850 | Msa0588260 | 0.834030 | 3.793300e-56 | -8.615850e-47 |
| Msa0485850 | Msa0589190 | 0.827608 | 1.424499e-54 | -8.615850e-47 |
| Msa0485850 | Msa0590650 | 0.836438 | 9.356398e-57 | -8.615850e-47 |
| Msa0485850 | Msa0591710 | 0.801255 | 9.814542e-49 | -8.615850e-47 |
| Msa0485850 | Msa0594910 | 0.808439 | 3.095635e-50 | -8.615850e-47 |
| Msa0485850 | Msa0603540 | 0.801695 | 7.975166e-49 | -8.615850e-47 |
| Msa0485850 | Msa0603570 | 0.853686 | 2.027524e-61 | -8.615850e-47 |
| Msa0485850 | Msa0604290 | 0.809778 | 1.599303e-50 | -8.615850e-47 |
| Msa0485850 | Msa0608710 | 0.811638 | 6.333755e-51 | -8.615850e-47 |
| Msa0485850 | Msa0610390 | 0.823415 | 1.402530e-53 | -8.615850e-47 |
| Msa0485850 | Msa0630950 | 0.811346 | 7.330092e-51 | -8.615850e-47 |
| Msa0485850 | Msa0631350 | 0.827642 | 1.397792e-54 | -8.615850e-47 |
| Msa0485850 | Msa0642970 | 0.824763 | 6.767525e-54 | -8.615850e-47 |
| Msa0485850 | Msa0647490 | 0.822730 | 2.025766e-53 | -8.615850e-47 |
| Msa0485850 | Msa0649350 | 0.803103 | 4.089419e-49 | -8.615850e-47 |
| Msa0485850 | Msa0650190 | 0.819643 | 1.042684e-52 | -8.615850e-47 |
| Msa0485850 | Msa0650920 | 0.826392 | 2.781904e-54 | -8.615850e-47 |
| Msa0485850 | Msa0661300 | 0.828902 | 6.944647e-55 | -8.615850e-47 |
| Msa0485850 | Msa0662630 | 0.830830 | 2.354885e-55 | -8.615850e-47 |
| Msa0485850 | Msa0663900 | 0.823684 | 1.213066e-53 | -8.615850e-47 |
| Msa0485850 | Msa0666270 | 0.806379 | 8.466306e-50 | -8.615850e-47 |
| Msa0485850 | Msa0669720 | 0.803285 | 3.750607e-49 | -8.615850e-47 |
| Msa0485850 | Msa0673470 | 0.825857 | 3.728174e-54 | -8.615850e-47 |
| Msa0485850 | Msa0682680 | 0.827618 | 1.416239e-54 | -8.615850e-47 |
| Msa0485850 | Msa0687630 | 0.837642 | 4.607697e-57 | -8.615850e-47 |
| Msa0485850 | Msa0689500 | 0.832637 | 8.437427e-56 | -8.615850e-47 |
| Msa0485850 | Msa0692840 | 0.825360 | 4.891270e-54 | -8.615850e-47 |
| Msa0485850 | Msa0692940 | 0.853451 | 2.369377e-61 | -8.615850e-47 |
| Msa0485850 | Msa0697940 | 0.805057 | 1.603731e-49 | -8.615850e-47 |
| Msa0485850 | Msa0698030 | 0.802655 | 5.060177e-49 | -8.615850e-47 |
| Msa0485850 | Msa0698540 | 0.815435 | 9.256867e-52 | -8.615850e-47 |
| Msa0485850 | Msa0701100 | 0.818012 | 2.447898e-52 | -8.615850e-47 |
| Msa0485850 | Msa0706960 | 0.854040 | 1.603464e-61 | -8.615850e-47 |
| Msa0485850 | Msa0713820 | 0.819160 | 1.344003e-52 | -8.615850e-47 |
| Msa0485850 | Msa0718740 | 0.815910 | 7.258074e-52 | -8.615850e-47 |
| Msa0485850 | Msa0722020 | 0.832769 | 7.824878e-56 | -8.615850e-47 |
| Msa0485850 | Msa0737600 | 0.824090 | 9.741996e-54 | -8.615850e-47 |
| Msa0485850 | Msa0756060 | 0.809018 | 2.327499e-50 | -8.615850e-47 |
| Msa0485850 | Msa0763020 | 0.822395 | 2.424186e-53 | -8.615850e-47 |
| Msa0485850 | Msa0763070 | 0.825928 | 3.587933e-54 | -8.615850e-47 |
| Msa0485850 | Msa0797750 | 0.814063 | 1.864739e-51 | -8.615850e-47 |
| Msa0485850 | Msa0801110 | 0.827365 | 1.628827e-54 | -8.615850e-47 |
| Msa0485850 | Msa0805500 | 0.819426 | 1.168584e-52 | -8.615850e-47 |
| Msa0485850 | Msa0806920 | 0.813814 | 2.115048e-51 | -8.615850e-47 |
| Msa0485850 | Msa0820990 | 0.800629 | 1.317499e-48 | -8.615850e-47 |
| Msa0485850 | Msa0833310 | 0.825591 | 4.311927e-54 | -8.615850e-47 |
| Msa0485850 | Msa0835280 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
| Msa0485850 | Msa0837660 | 0.820337 | 7.234029e-53 | -8.615850e-47 |
| Msa0485850 | Msa0838370 | 0.802644 | 5.086566e-49 | -8.615850e-47 |
| Msa0485850 | Msa0842830 | 0.854474 | 1.201453e-61 | -8.615850e-47 |
| Msa0485850 | Msa0847080 | 0.821766 | 3.390449e-53 | -8.615850e-47 |
| Msa0485850 | Msa0851620 | 0.802189 | 6.312433e-49 | -8.615850e-47 |
| Msa0485850 | Msa0858440 | 0.817833 | 2.685566e-52 | -8.615850e-47 |
| Msa0485850 | Msa0869120 | 0.811662 | 6.259724e-51 | -8.615850e-47 |
| Msa0485850 | Msa0881270 | 0.825681 | 4.105259e-54 | -8.615850e-47 |
| Msa0485850 | Msa0900630 | 0.812550 | 4.007898e-51 | -8.615850e-47 |
| Msa0485850 | Msa0930140 | 0.807013 | 6.217781e-50 | -8.615850e-47 |
| Msa0485850 | Msa0933290 | 0.811011 | 8.664947e-51 | -8.615850e-47 |
| Msa0485850 | Msa0947800 | 0.813569 | 2.395445e-51 | -8.615850e-47 |
| Msa0485850 | Msa0965860 | 0.801462 | 8.900779e-49 | -8.615850e-47 |
| Msa0485850 | Msa0971020 | 0.841112 | 5.789882e-58 | -8.615850e-47 |
| Msa0485850 | Msa0974810 | 0.825441 | 4.679192e-54 | -8.615850e-47 |
| Msa0485850 | Msa1023180 | 0.847455 | 1.144346e-59 | -8.615850e-47 |
| Msa0485850 | Msa1034150 | 0.805323 | 1.410905e-49 | -8.615850e-47 |
| Msa0485850 | Msa1043050 | 0.853024 | 3.140533e-61 | -8.615850e-47 |
| Msa0485850 | Msa1046020 | 0.842358 | 2.715981e-58 | -8.615850e-47 |
| Msa0485850 | Msa1046060 | 0.836019 | 1.195963e-56 | -8.615850e-47 |
| Msa0485850 | Msa1089840 | 0.827014 | 1.976991e-54 | -8.615850e-47 |
| Msa0485850 | Msa1091100 | 0.852533 | 4.338139e-61 | -8.615850e-47 |
| Msa0485850 | Msa1113670 | 0.801280 | 9.699176e-49 | -8.615850e-47 |
| Msa0485850 | Msa1123810 | 0.804716 | 1.889991e-49 | -8.615850e-47 |
| Msa0485850 | Msa1126510 | 0.803349 | 3.637122e-49 | -8.615850e-47 |
| Msa0485850 | Msa1126770 | 0.817683 | 2.903626e-52 | -8.615850e-47 |
| Msa0485850 | Msa1126830 | 0.823313 | 1.481224e-53 | -8.615850e-47 |
| Msa0485850 | Msa1130980 | 0.802502 | 5.441522e-49 | -8.615850e-47 |
| Msa0485850 | Msa1134090 | 0.854559 | 1.135420e-61 | -8.615850e-47 |
| Msa0485850 | Msa1143840 | 0.813529 | 2.444210e-51 | -8.615850e-47 |
| Msa0485850 | Msa1150710 | 0.863202 | 2.946491e-64 | -8.615850e-47 |
| Msa0485850 | Msa1165780 | 0.820681 | 6.031986e-53 | -8.615850e-47 |
| Msa0485850 | Msa1165940 | 0.819980 | 8.735770e-53 | -8.615850e-47 |
| Msa0485850 | Msa1184370 | 0.809596 | 1.749820e-50 | -8.615850e-47 |
| Msa0485850 | Msa1190930 | 0.805407 | 1.355267e-49 | -8.615850e-47 |
| Msa0485850 | Msa1199990 | 0.817743 | 2.814992e-52 | -8.615850e-47 |
| Msa0485850 | Msa1205590 | 0.805055 | 1.605678e-49 | -8.615850e-47 |
| Msa0485850 | Msa1227690 | 0.815243 | 1.021669e-51 | -8.615850e-47 |
| Msa0485850 | Msa1234980 | 0.800870 | 1.176682e-48 | -8.615850e-47 |
| Msa0485850 | Msa1239910 | 0.820215 | 7.715797e-53 | -8.615850e-47 |
| Msa0485850 | Msa1244600 | 0.809708 | 1.655787e-50 | -8.615850e-47 |
| Msa0485850 | Msa1250530 | 0.800724 | 1.260322e-48 | -8.615850e-47 |
| Msa0485850 | Msa1256470 | 0.830869 | 2.303406e-55 | -8.615850e-47 |
| Msa0485850 | Msa1269300 | 0.828572 | 8.346726e-55 | -8.615850e-47 |
| Msa0485850 | Msa1296830 | 0.868680 | 5.452989e-66 | -8.615850e-47 |
| Msa0485850 | Msa1303580 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0485850 | Msa1304820 | 0.834033 | 3.787794e-56 | -8.615850e-47 |
| Msa0485850 | Msa1310690 | 0.811418 | 7.072232e-51 | -8.615850e-47 |
| Msa0485850 | Msa1320390 | 0.820294 | 7.399413e-53 | -8.615850e-47 |
| Msa0485850 | Msa1336560 | 0.802272 | 6.070850e-49 | -8.615850e-47 |
| Msa0485850 | Msa1340020 | 0.800639 | 1.311280e-48 | -8.615850e-47 |
| Msa0485850 | Msa1343290 | 0.835466 | 1.651058e-56 | -8.615850e-47 |
| Msa0485850 | Msa1348850 | 0.816649 | 4.958730e-52 | -8.615850e-47 |
| Msa0485850 | Msa1361520 | 0.804489 | 2.107427e-49 | -8.615850e-47 |
| Msa0485850 | Msa1362420 | 0.815050 | 1.127473e-51 | -8.615850e-47 |
| Msa0485850 | Msa1364910 | 0.848052 | 7.837549e-60 | -8.615850e-47 |
| Msa0485850 | Msa1365800 | 0.802579 | 5.247882e-49 | -8.615850e-47 |
| Msa0485850 | Msa1367590 | 0.808411 | 3.137792e-50 | -8.615850e-47 |
| Msa0485850 | Msa1368120 | 0.804089 | 2.553690e-49 | -8.615850e-47 |
| Msa0485850 | Msa1368530 | 0.809084 | 2.253808e-50 | -8.615850e-47 |
| Msa0485850 | Msa1376650 | 0.829715 | 4.407736e-55 | -8.615850e-47 |
| Msa0485850 | Msa1382020 | 0.805545 | 1.267601e-49 | -8.615850e-47 |
| Msa0485850 | Msa1385770 | 0.836113 | 1.131722e-56 | -8.615850e-47 |
| Msa0485850 | Msa1393740 | 0.854967 | 8.646929e-62 | -8.615850e-47 |
| Msa0485850 | Msa1404010 | 0.849590 | 2.932338e-60 | -8.615850e-47 |
| Msa0485850 | Msa1404190 | 0.825187 | 5.373190e-54 | -8.615850e-47 |
| Msa0485850 | Msa1409240 | 0.835666 | 1.469265e-56 | -8.615850e-47 |
| Msa0485850 | Msa1418340 | 0.803604 | 3.220281e-49 | -8.615850e-47 |
| Msa0485850 | Msa1419640 | 0.807714 | 4.417400e-50 | -8.615850e-47 |
| Msa0485850 | Msa1420990 | 0.843791 | 1.127629e-58 | -8.615850e-47 |
| Msa0485850 | Msa1423910 | 0.846091 | 2.700836e-59 | -8.615850e-47 |
| Msa0485850 | Msa1431040 | 0.807930 | 3.972958e-50 | -8.615850e-47 |
| Msa0485850 | Msa1434140 | 0.828230 | 1.008977e-54 | -8.615850e-47 |
| Msa0485850 | Msa1434420 | -0.809450 | 1.880549e-50 | -8.615850e-47 |
| Msa0485850 | Msa1435750 | 0.826860 | 2.151472e-54 | -8.615850e-47 |
| Msa0485850 | Msa1447890 | 0.831743 | 1.404139e-55 | -8.615850e-47 |
| Msa0485850 | Msa1448630 | 0.849977 | 2.286054e-60 | -8.615850e-47 |
| Msa0485850 | Msa1451560 | 0.809763 | 1.610809e-50 | -8.615850e-47 |
| Msa0485850 | Msa1459960 | 0.809124 | 2.209064e-50 | -8.615850e-47 |
| Msa0485850 | Msa1461280 | 0.827821 | 1.266108e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0485850 | MtrunA17_Chr3g0109351 | 98.592 | 71 | 1 | 0 | 1 | 71 | 1 | 71 | 2.26e-46 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0485850 | AT3G14430.1 | 65.079 | 63 | 21 | 1 | 9 | 71 | 15 | 76 | 1.08e-24 | 87.8 |
Find 36 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATACTCAGTTCTCAAATT+TGG | 0.144615 | 3_4:+3651514 | Msa0485850:three_prime_UTR |
| CAAACATCAATTCCTTTAAA+AGG | 0.150864 | 3_4:-3651164 | None:intergenic |
| TATCTTTCATGTCAAAGATA+TGG | 0.312816 | 3_4:-3651562 | None:intergenic |
| ATTTCTTACGAAGGCGAAAA+TGG | 0.322719 | 3_4:-3650016 | None:intergenic |
| GTTAATGTTACATTCTAGTT+AGG | 0.334854 | 3_4:+3651360 | Msa0485850:three_prime_UTR |
| ACAAATACTTGATTGTATTC+AGG | 0.336136 | 3_4:-3651109 | None:intergenic |
| GTATCTTTATGTAAGTTTGT+AGG | 0.358607 | 3_4:+3651303 | Msa0485850:three_prime_UTR |
| TTTGAGAACTGAGTATGAAT+AGG | 0.363509 | 3_4:-3651509 | None:intergenic |
| CTGGTGGTGGACCAGAGCTT+TGG | 0.389186 | 3_4:+3651140 | Msa0485850:CDS |
| CTTTAAAAGGGCCAAAGCTC+TGG | 0.402112 | 3_4:-3651151 | None:intergenic |
| TCTCATTCTATATCTCGTTT+CGG | 0.403988 | 3_4:+3651458 | Msa0485850:three_prime_UTR |
| ATCTCGTTTCGGTTTAGCTT+AGG | 0.404307 | 3_4:+3651469 | Msa0485850:three_prime_UTR |
| TGTCTGTCTCTATTTCAGAT+TGG | 0.429046 | 3_4:+3651426 | Msa0485850:three_prime_UTR |
| AAACATCAATTCCTTTAAAA+GGG | 0.443719 | 3_4:-3651163 | None:intergenic |
| TTGAGAACTGAGTATGAATA+GGG | 0.461008 | 3_4:-3651508 | None:intergenic |
| AAAGGAATTGATGTTTGGAC+AGG | 0.475928 | 3_4:+3651170 | Msa0485850:exon |
| CAAAGCTCTGGTCCACCACC+AGG | 0.488950 | 3_4:-3651139 | None:intergenic |
| CAAGTATTTGTGAAGAAGCC+TGG | 0.508253 | 3_4:+3651121 | Msa0485850:CDS |
| GACAGGTTGGACGTCATCCA+TGG | 0.522357 | 3_4:+3651187 | Msa0485850:three_prime_UTR |
| CATAAAGATACAAATACAAA+CGG | 0.528427 | 3_4:-3651291 | None:intergenic |
| CAGAGAGAAGAAGACTAGAC+TGG | 0.543222 | 3_4:+3649902 | Msa0485850:five_prime_UTR |
| GAATTGATGTTTGGACAGGT+TGG | 0.543485 | 3_4:+3651174 | Msa0485850:three_prime_UTR |
| AGCTTAGGAACAGAAATGCT+CGG | 0.563945 | 3_4:+3651484 | Msa0485850:three_prime_UTR |
| TGAAGAAGAAAAGAAAGAAG+AGG | 0.565354 | 3_4:-3650053 | None:intergenic |
| AGAGAACAGCGATGGCTAGA+CGG | 0.584999 | 3_4:+3649947 | Msa0485850:exon |
| CTAGACGGCGAGTCGAGACT+CGG | 0.585126 | 3_4:+3649962 | Msa0485850:CDS |
| GAAATATGTAAAATCATCAC+AGG | 0.585504 | 3_4:-3651269 | None:intergenic |
| AAAATATGTGAAATCATCAC+AGG | 0.600529 | 3_4:-3651228 | None:intergenic |
| GGAACGAGTCGTTATTGACT+CGG | 0.604165 | 3_4:+3649983 | Msa0485850:CDS |
| TTTGTGAAGAAGCCTGGTGG+TGG | 0.604245 | 3_4:+3651127 | Msa0485850:CDS |
| ATTAACATCATTCAAATCTG+TGG | 0.614330 | 3_4:-3651343 | None:intergenic |
| GAGGTGAGAGAGAACAGCGA+TGG | 0.620676 | 3_4:+3649939 | Msa0485850:exon |
| AAACTCAGCATTTCTTACGA+AGG | 0.638252 | 3_4:-3650025 | None:intergenic |
| GCGTGCTTAGAATACCTCCA+TGG | 0.702615 | 3_4:-3651204 | None:intergenic |
| AGGTTGGACGTCATCCATGG+AGG | 0.746774 | 3_4:+3651190 | Msa0485850:three_prime_UTR |
| GTATTTGTGAAGAAGCCTGG+TGG | 0.787083 | 3_4:+3651124 | Msa0485850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGGATAATTATATCAAAA+AGG | + | chr3_4:3650288-3650307 | Msa0485850:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr3_4:3650658-3650677 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr3_4:3650559-3650578 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr3_4:3650658-3650677 | Msa0485850:intron | 15.0% |
| !!! | TTTTGATAAGTGAATATTTT+TGG | + | chr3_4:3650966-3650985 | Msa0485850:intron | 15.0% |
| !! | ATTGGATAATTATATCAAAA+AGG | + | chr3_4:3650288-3650307 | Msa0485850:intron | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | - | chr3_4:3650658-3650677 | None:intergenic | 15.0% |
| !!! | ATAAGCAAAATTTACTTTTT+AGG | - | chr3_4:3650559-3650578 | None:intergenic | 15.0% |
| !!! | ATTTTGCTTATATTTTGAAA+CGG | + | chr3_4:3650658-3650677 | Msa0485850:intron | 15.0% |
| !!! | TTTTGATAAGTGAATATTTT+TGG | + | chr3_4:3650966-3650985 | Msa0485850:intron | 15.0% |
| !!! | CTTTTAATGTTTGAGAAATT+AGG | + | chr3_4:3650204-3650223 | Msa0485850:intron | 20.0% |
| !! | TTAGTTACTAAATTGAAAAC+TGG | + | chr3_4:3650254-3650273 | Msa0485850:intron | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | chr3_4:3650939-3650958 | Msa0485850:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | chr3_4:3650943-3650962 | Msa0485850:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | chr3_4:3651166-3651185 | None:intergenic | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | chr3_4:3651294-3651313 | None:intergenic | 20.0% |
| !!! | CTTTTAATGTTTGAGAAATT+AGG | + | chr3_4:3650204-3650223 | Msa0485850:intron | 20.0% |
| !! | TTAGTTACTAAATTGAAAAC+TGG | + | chr3_4:3650254-3650273 | Msa0485850:intron | 20.0% |
| !! | CTTCATAATTCATTCATATA+TGG | + | chr3_4:3650939-3650958 | Msa0485850:intron | 20.0% |
| !! | ATAATTCATTCATATATGGT+TGG | + | chr3_4:3650943-3650962 | Msa0485850:intron | 20.0% |
| !!! | AAACATCAATTCCTTTAAAA+GGG | - | chr3_4:3651166-3651185 | None:intergenic | 20.0% |
| !! | CATAAAGATACAAATACAAA+CGG | - | chr3_4:3651294-3651313 | None:intergenic | 20.0% |
| ! | CACAAAAAAAAAAAAGAGAG+AGG | - | chr3_4:3650116-3650135 | None:intergenic | 25.0% |
| ! | TTTGAACAAATGATGCAAAT+GGG | - | chr3_4:3650150-3650169 | None:intergenic | 25.0% |
| ! | ATTTGAACAAATGATGCAAA+TGG | - | chr3_4:3650151-3650170 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATC+TGG | + | chr3_4:3650168-3650187 | Msa0485850:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATCT+GGG | + | chr3_4:3650169-3650188 | Msa0485850:intron | 25.0% |
| ! | AACTATATACCAATTCCAAT+TGG | - | chr3_4:3650328-3650347 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr3_4:3650584-3650603 | Msa0485850:intron | 25.0% |
| ! | ATGTATGTGGTACATATTTA+TGG | - | chr3_4:3650611-3650630 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr3_4:3650584-3650603 | None:intergenic | 25.0% |
| ! | TTAAATTACAATCAGCATGT+TGG | + | chr3_4:3650739-3650758 | Msa0485850:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr3_4:3650864-3650883 | Msa0485850:intron | 25.0% |
| !! | TTGTCTTGTAATTTCACTTT+TGG | + | chr3_4:3651041-3651060 | Msa0485850:intron | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | chr3_4:3651112-3651131 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | chr3_4:3651167-3651186 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | chr3_4:3651165-3651184 | Msa0485850:exon | 25.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | chr3_4:3651231-3651250 | None:intergenic | 25.0% |
| ! | GAAATATGTAAAATCATCAC+AGG | - | chr3_4:3651272-3651291 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | chr3_4:3651303-3651322 | Msa0485850:three_prime_UTR | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | chr3_4:3651346-3651365 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | chr3_4:3651360-3651379 | Msa0485850:three_prime_UTR | 25.0% |
| ! | TATCTTTCATGTCAAAGATA+TGG | - | chr3_4:3651565-3651584 | None:intergenic | 25.0% |
| ! | CACAAAAAAAAAAAAGAGAG+AGG | - | chr3_4:3650116-3650135 | None:intergenic | 25.0% |
| ! | TTTGAACAAATGATGCAAAT+GGG | - | chr3_4:3650150-3650169 | None:intergenic | 25.0% |
| ! | ATTTGAACAAATGATGCAAA+TGG | - | chr3_4:3650151-3650170 | None:intergenic | 25.0% |
| !!! | AATTTTCGTTCTTTTTCATC+TGG | + | chr3_4:3650168-3650187 | Msa0485850:intron | 25.0% |
| !!! | ATTTTCGTTCTTTTTCATCT+GGG | + | chr3_4:3650169-3650188 | Msa0485850:intron | 25.0% |
| ! | AACTATATACCAATTCCAAT+TGG | - | chr3_4:3650328-3650347 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | + | chr3_4:3650584-3650603 | Msa0485850:intron | 25.0% |
| ! | ATGTATGTGGTACATATTTA+TGG | - | chr3_4:3650611-3650630 | None:intergenic | 25.0% |
| ! | CATTCATTTAATGATGTATG+TGG | - | chr3_4:3650584-3650603 | None:intergenic | 25.0% |
| ! | TTAAATTACAATCAGCATGT+TGG | + | chr3_4:3650739-3650758 | Msa0485850:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | + | chr3_4:3650864-3650883 | Msa0485850:intron | 25.0% |
| !! | TTGTCTTGTAATTTCACTTT+TGG | + | chr3_4:3651041-3651060 | Msa0485850:intron | 25.0% |
| ! | ACAAATACTTGATTGTATTC+AGG | - | chr3_4:3651112-3651131 | None:intergenic | 25.0% |
| ! | CAAACATCAATTCCTTTAAA+AGG | - | chr3_4:3651167-3651186 | None:intergenic | 25.0% |
| !!! | CTTTTAAAGGAATTGATGTT+TGG | + | chr3_4:3651165-3651184 | Msa0485850:exon | 25.0% |
| ! | AAAATATGTGAAATCATCAC+AGG | - | chr3_4:3651231-3651250 | None:intergenic | 25.0% |
| ! | GAAATATGTAAAATCATCAC+AGG | - | chr3_4:3651272-3651291 | None:intergenic | 25.0% |
| ! | GTATCTTTATGTAAGTTTGT+AGG | + | chr3_4:3651303-3651322 | Msa0485850:three_prime_UTR | 25.0% |
| ! | ATTAACATCATTCAAATCTG+TGG | - | chr3_4:3651346-3651365 | None:intergenic | 25.0% |
| !! | GTTAATGTTACATTCTAGTT+AGG | + | chr3_4:3651360-3651379 | Msa0485850:three_prime_UTR | 25.0% |
| ! | TATCTTTCATGTCAAAGATA+TGG | - | chr3_4:3651565-3651584 | None:intergenic | 25.0% |
| ! | ACTGGATTGTTAGAATTTTG+AGG | + | chr3_4:3649920-3649939 | Msa0485850:five_prime_UTR | 30.0% |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | chr3_4:3650056-3650075 | None:intergenic | 30.0% | |
| ATTCTGTTTCCAATTGGAAT+TGG | + | chr3_4:3650316-3650335 | Msa0485850:intron | 30.0% | |
| ACTGATGAAAACAACTTACA+AGG | - | chr3_4:3650494-3650513 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr3_4:3650662-3650681 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr3_4:3650661-3650680 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr3_4:3650661-3650680 | Msa0485850:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr3_4:3650662-3650681 | Msa0485850:intron | 30.0% |
| TGAAATTACAAGACAAACAG+AGG | - | chr3_4:3651037-3651056 | None:intergenic | 30.0% | |
| TCTCATTCTATATCTCGTTT+CGG | + | chr3_4:3651458-3651477 | Msa0485850:three_prime_UTR | 30.0% | |
| TTGAGAACTGAGTATGAATA+GGG | - | chr3_4:3651511-3651530 | None:intergenic | 30.0% | |
| TTTGAGAACTGAGTATGAAT+AGG | - | chr3_4:3651512-3651531 | None:intergenic | 30.0% | |
| TCATACTCAGTTCTCAAATT+TGG | + | chr3_4:3651514-3651533 | Msa0485850:three_prime_UTR | 30.0% | |
| ! | ACTGGATTGTTAGAATTTTG+AGG | + | chr3_4:3649920-3649939 | Msa0485850:five_prime_UTR | 30.0% |
| TGAAGAAGAAAAGAAAGAAG+AGG | - | chr3_4:3650056-3650075 | None:intergenic | 30.0% | |
| ATTCTGTTTCCAATTGGAAT+TGG | + | chr3_4:3650316-3650335 | Msa0485850:intron | 30.0% | |
| ACTGATGAAAACAACTTACA+AGG | - | chr3_4:3650494-3650513 | None:intergenic | 30.0% | |
| !!! | TGCTTATATTTTGAAACGGA+GGG | - | chr3_4:3650662-3650681 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | - | chr3_4:3650661-3650680 | None:intergenic | 30.0% |
| !!! | TTGCTTATATTTTGAAACGG+AGG | + | chr3_4:3650661-3650680 | Msa0485850:intron | 30.0% |
| !!! | TGCTTATATTTTGAAACGGA+GGG | + | chr3_4:3650662-3650681 | Msa0485850:intron | 30.0% |
| TGAAATTACAAGACAAACAG+AGG | - | chr3_4:3651037-3651056 | None:intergenic | 30.0% | |
| TCTCATTCTATATCTCGTTT+CGG | + | chr3_4:3651458-3651477 | Msa0485850:three_prime_UTR | 30.0% | |
| TTGAGAACTGAGTATGAATA+GGG | - | chr3_4:3651511-3651530 | None:intergenic | 30.0% | |
| TTTGAGAACTGAGTATGAAT+AGG | - | chr3_4:3651512-3651531 | None:intergenic | 30.0% | |
| TCATACTCAGTTCTCAAATT+TGG | + | chr3_4:3651514-3651533 | Msa0485850:three_prime_UTR | 30.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | chr3_4:3650019-3650038 | None:intergenic | 35.0% | |
| AAACTCAGCATTTCTTACGA+AGG | - | chr3_4:3650028-3650047 | None:intergenic | 35.0% | |
| !! | AAACTGGTTTGACGATTGAT+TGG | + | chr3_4:3650270-3650289 | Msa0485850:intron | 35.0% |
| GTAGAGATTCTGTTTCCAAT+TGG | + | chr3_4:3650310-3650329 | Msa0485850:intron | 35.0% | |
| GATTACGAGTCTGTTTGAAT+TGG | - | chr3_4:3650716-3650735 | None:intergenic | 35.0% | |
| ATTACAAGACAAACAGAGGA+GGG | - | chr3_4:3651033-3651052 | None:intergenic | 35.0% | |
| AATTACAAGACAAACAGAGG+AGG | - | chr3_4:3651034-3651053 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | chr3_4:3651170-3651189 | Msa0485850:exon | 35.0% | |
| TGTCTGTCTCTATTTCAGAT+TGG | + | chr3_4:3651426-3651445 | Msa0485850:three_prime_UTR | 35.0% | |
| ATTTCTTACGAAGGCGAAAA+TGG | - | chr3_4:3650019-3650038 | None:intergenic | 35.0% | |
| AAACTCAGCATTTCTTACGA+AGG | - | chr3_4:3650028-3650047 | None:intergenic | 35.0% | |
| !! | AAACTGGTTTGACGATTGAT+TGG | + | chr3_4:3650270-3650289 | Msa0485850:intron | 35.0% |
| GTAGAGATTCTGTTTCCAAT+TGG | + | chr3_4:3650310-3650329 | Msa0485850:intron | 35.0% | |
| GATTACGAGTCTGTTTGAAT+TGG | - | chr3_4:3650716-3650735 | None:intergenic | 35.0% | |
| ATTACAAGACAAACAGAGGA+GGG | - | chr3_4:3651033-3651052 | None:intergenic | 35.0% | |
| AATTACAAGACAAACAGAGG+AGG | - | chr3_4:3651034-3651053 | None:intergenic | 35.0% | |
| AAAGGAATTGATGTTTGGAC+AGG | + | chr3_4:3651170-3651189 | Msa0485850:exon | 35.0% | |
| TGTCTGTCTCTATTTCAGAT+TGG | + | chr3_4:3651426-3651445 | Msa0485850:three_prime_UTR | 35.0% | |
| !!! | ACAATCAGCATGTTGGCTTT+TGG | + | chr3_4:3650746-3650765 | Msa0485850:intron | 40.0% |
| TGGTGTATCATGTGTGAACA+CGG | + | chr3_4:3650766-3650785 | Msa0485850:intron | 40.0% | |
| TTCTCAAATTAGGTGTGTCC+CGG | - | chr3_4:3650910-3650929 | None:intergenic | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | chr3_4:3651121-3651140 | Msa0485850:CDS | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | chr3_4:3651174-3651193 | Msa0485850:three_prime_UTR | 40.0% | |
| ! | ATCTCGTTTCGGTTTAGCTT+AGG | + | chr3_4:3651469-3651488 | Msa0485850:three_prime_UTR | 40.0% |
| AGCTTAGGAACAGAAATGCT+CGG | + | chr3_4:3651484-3651503 | Msa0485850:three_prime_UTR | 40.0% | |
| !!! | ACAATCAGCATGTTGGCTTT+TGG | + | chr3_4:3650746-3650765 | Msa0485850:intron | 40.0% |
| TGGTGTATCATGTGTGAACA+CGG | + | chr3_4:3650766-3650785 | Msa0485850:intron | 40.0% | |
| TTCTCAAATTAGGTGTGTCC+CGG | - | chr3_4:3650910-3650929 | None:intergenic | 40.0% | |
| CAAGTATTTGTGAAGAAGCC+TGG | + | chr3_4:3651121-3651140 | Msa0485850:CDS | 40.0% | |
| GAATTGATGTTTGGACAGGT+TGG | + | chr3_4:3651174-3651193 | Msa0485850:three_prime_UTR | 40.0% | |
| ! | ATCTCGTTTCGGTTTAGCTT+AGG | + | chr3_4:3651469-3651488 | Msa0485850:three_prime_UTR | 40.0% |
| AGCTTAGGAACAGAAATGCT+CGG | + | chr3_4:3651484-3651503 | Msa0485850:three_prime_UTR | 40.0% | |
| CAGAGAGAAGAAGACTAGAC+TGG | + | chr3_4:3649902-3649921 | Msa0485850:five_prime_UTR | 45.0% | |
| ! | GGAACGAGTCGTTATTGACT+CGG | + | chr3_4:3649983-3650002 | Msa0485850:CDS | 45.0% |
| ! | TTGAAACGGAGGGAGTATGT+CGG | + | chr3_4:3650672-3650691 | Msa0485850:intron | 45.0% |
| TGCAGACATCAGACACGAAA+CGG | + | chr3_4:3650796-3650815 | Msa0485850:intron | 45.0% | |
| GCACGCACACTTCTCAAATT+AGG | - | chr3_4:3650920-3650939 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | chr3_4:3651124-3651143 | Msa0485850:CDS | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | chr3_4:3651154-3651173 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | chr3_4:3651152-3651171 | Msa0485850:CDS | 45.0% |
| CAGAGAGAAGAAGACTAGAC+TGG | + | chr3_4:3649902-3649921 | Msa0485850:five_prime_UTR | 45.0% | |
| ! | GGAACGAGTCGTTATTGACT+CGG | + | chr3_4:3649983-3650002 | Msa0485850:CDS | 45.0% |
| ! | TTGAAACGGAGGGAGTATGT+CGG | + | chr3_4:3650672-3650691 | Msa0485850:intron | 45.0% |
| TGCAGACATCAGACACGAAA+CGG | + | chr3_4:3650796-3650815 | Msa0485850:intron | 45.0% | |
| GCACGCACACTTCTCAAATT+AGG | - | chr3_4:3650920-3650939 | None:intergenic | 45.0% | |
| GTATTTGTGAAGAAGCCTGG+TGG | + | chr3_4:3651124-3651143 | Msa0485850:CDS | 45.0% | |
| ! | CTTTAAAAGGGCCAAAGCTC+TGG | - | chr3_4:3651154-3651173 | None:intergenic | 45.0% |
| !! | CAGAGCTTTGGCCCTTTTAA+AGG | + | chr3_4:3651152-3651171 | Msa0485850:CDS | 45.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | chr3_4:3650839-3650858 | None:intergenic | 5.0% |
| !!! | TTATTTTATCAAATTATTAT+TGG | - | chr3_4:3650839-3650858 | None:intergenic | 5.0% |
| AGAGAACAGCGATGGCTAGA+CGG | + | chr3_4:3649947-3649966 | Msa0485850:exon | 50.0% | |
| ATCATGTGTGAACACGGACG+CGG | + | chr3_4:3650772-3650791 | Msa0485850:intron | 50.0% | |
| CATCAGACACGAAACGGACA+TGG | + | chr3_4:3650802-3650821 | Msa0485850:intron | 50.0% | |
| !! | CATATGTGTCGGTGTCGTGT+TGG | + | chr3_4:3650875-3650894 | Msa0485850:intron | 50.0% |
| AATTAGGTGTGTCCCGGTGT+CGG | - | chr3_4:3650904-3650923 | None:intergenic | 50.0% | |
| AAGACAAACAGAGGAGGGAG+CGG | - | chr3_4:3651028-3651047 | None:intergenic | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | chr3_4:3651127-3651146 | Msa0485850:CDS | 50.0% | |
| GCGTGCTTAGAATACCTCCA+TGG | - | chr3_4:3651207-3651226 | None:intergenic | 50.0% | |
| AGAGAACAGCGATGGCTAGA+CGG | + | chr3_4:3649947-3649966 | Msa0485850:exon | 50.0% | |
| ATCATGTGTGAACACGGACG+CGG | + | chr3_4:3650772-3650791 | Msa0485850:intron | 50.0% | |
| CATCAGACACGAAACGGACA+TGG | + | chr3_4:3650802-3650821 | Msa0485850:intron | 50.0% | |
| !! | CATATGTGTCGGTGTCGTGT+TGG | + | chr3_4:3650875-3650894 | Msa0485850:intron | 50.0% |
| AATTAGGTGTGTCCCGGTGT+CGG | - | chr3_4:3650904-3650923 | None:intergenic | 50.0% | |
| AAGACAAACAGAGGAGGGAG+CGG | - | chr3_4:3651028-3651047 | None:intergenic | 50.0% | |
| TTTGTGAAGAAGCCTGGTGG+TGG | + | chr3_4:3651127-3651146 | Msa0485850:CDS | 50.0% | |
| GCGTGCTTAGAATACCTCCA+TGG | - | chr3_4:3651207-3651226 | None:intergenic | 50.0% | |
| GAGGTGAGAGAGAACAGCGA+TGG | + | chr3_4:3649939-3649958 | Msa0485850:exon | 55.0% | |
| AGACAAACAGAGGAGGGAGC+GGG | - | chr3_4:3651027-3651046 | None:intergenic | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | chr3_4:3651187-3651206 | Msa0485850:three_prime_UTR | 55.0% |
| AGGTTGGACGTCATCCATGG+AGG | + | chr3_4:3651190-3651209 | Msa0485850:three_prime_UTR | 55.0% | |
| GAGGTGAGAGAGAACAGCGA+TGG | + | chr3_4:3649939-3649958 | Msa0485850:exon | 55.0% | |
| AGACAAACAGAGGAGGGAGC+GGG | - | chr3_4:3651027-3651046 | None:intergenic | 55.0% | |
| ! | GACAGGTTGGACGTCATCCA+TGG | + | chr3_4:3651187-3651206 | Msa0485850:three_prime_UTR | 55.0% |
| AGGTTGGACGTCATCCATGG+AGG | + | chr3_4:3651190-3651209 | Msa0485850:three_prime_UTR | 55.0% | |
| CTAGACGGCGAGTCGAGACT+CGG | + | chr3_4:3649962-3649981 | Msa0485850:CDS | 60.0% | |
| ! | GTCGTGTTGGTGTCCGACAC+CGG | + | chr3_4:3650888-3650907 | Msa0485850:intron | 60.0% |
| ! | TCGTGTTGGTGTCCGACACC+GGG | + | chr3_4:3650889-3650908 | Msa0485850:intron | 60.0% |
| ACAAACAGAGGAGGGAGCGG+GGG | - | chr3_4:3651025-3651044 | None:intergenic | 60.0% | |
| GACAAACAGAGGAGGGAGCG+GGG | - | chr3_4:3651026-3651045 | None:intergenic | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | chr3_4:3651142-3651161 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | chr3_4:3651140-3651159 | Msa0485850:CDS | 60.0% |
| CTAGACGGCGAGTCGAGACT+CGG | + | chr3_4:3649962-3649981 | Msa0485850:CDS | 60.0% | |
| ! | GTCGTGTTGGTGTCCGACAC+CGG | + | chr3_4:3650888-3650907 | Msa0485850:intron | 60.0% |
| ! | TCGTGTTGGTGTCCGACACC+GGG | + | chr3_4:3650889-3650908 | Msa0485850:intron | 60.0% |
| ACAAACAGAGGAGGGAGCGG+GGG | - | chr3_4:3651025-3651044 | None:intergenic | 60.0% | |
| GACAAACAGAGGAGGGAGCG+GGG | - | chr3_4:3651026-3651045 | None:intergenic | 60.0% | |
| ! | CAAAGCTCTGGTCCACCACC+AGG | - | chr3_4:3651142-3651161 | None:intergenic | 60.0% |
| !! | CTGGTGGTGGACCAGAGCTT+TGG | + | chr3_4:3651140-3651159 | Msa0485850:CDS | 60.0% |
| AACAGAGGAGGGAGCGGGGG+TGG | - | chr3_4:3651022-3651041 | None:intergenic | 70.0% | |
| AACAGAGGAGGGAGCGGGGG+TGG | - | chr3_4:3651022-3651041 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 3649890 | 3651623 | 3649890 | ID=Msa0485850;Name=Msa0485850 |
| chr3_4 | mRNA | 3649890 | 3651623 | 3649890 | ID=Msa0485850-mRNA-1;Parent=Msa0485850;Name=Msa0485850-mRNA-1;_AED=0.02;_eAED=0.02;_QI=68|1|1|1|1|1|2|452|71 |
| chr3_4 | exon | 3649890 | 3650101 | 3649890 | ID=Msa0485850-mRNA-1:exon:1312;Parent=Msa0485850-mRNA-1 |
| chr3_4 | exon | 3651100 | 3651623 | 3651100 | ID=Msa0485850-mRNA-1:exon:1313;Parent=Msa0485850-mRNA-1 |
| chr3_4 | five_prime_UTR | 3649890 | 3649957 | 3649890 | ID=Msa0485850-mRNA-1:five_prime_utr;Parent=Msa0485850-mRNA-1 |
| chr3_4 | CDS | 3649958 | 3650101 | 3649958 | ID=Msa0485850-mRNA-1:cds;Parent=Msa0485850-mRNA-1 |
| chr3_4 | CDS | 3651100 | 3651171 | 3651100 | ID=Msa0485850-mRNA-1:cds;Parent=Msa0485850-mRNA-1 |
| chr3_4 | three_prime_UTR | 3651172 | 3651623 | 3651172 | ID=Msa0485850-mRNA-1:three_prime_utr;Parent=Msa0485850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
