Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470150 | XP_003598058.2 | 92.908 | 705 | 35 | 5 | 1 | 694 | 1 | 701 | 0.0 | 1310 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470150 | sp|Q9FQ19|SCC13_ARATH | 36.478 | 477 | 253 | 13 | 1 | 454 | 1 | 450 | 1.67e-65 | 232 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470150 | G7J066 | 92.908 | 705 | 35 | 5 | 1 | 694 | 1 | 701 | 0.0 | 1310 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0470150 | 0.810094 | 1.367387e-50 | -8.615850e-47 |
| Msa0050530 | Msa0470150 | 0.806776 | 6.980357e-50 | -8.615850e-47 |
| Msa0109730 | Msa0470150 | 0.805652 | 1.204065e-49 | -8.615850e-47 |
| Msa0204970 | Msa0470150 | 0.833171 | 6.214369e-56 | -8.615850e-47 |
| Msa0225800 | Msa0470150 | 0.826790 | 2.235496e-54 | -8.615850e-47 |
| Msa0373170 | Msa0470150 | 0.811535 | 6.668243e-51 | -8.615850e-47 |
| Msa0392570 | Msa0470150 | 0.918648 | 1.202276e-86 | -8.615850e-47 |
| Msa0421750 | Msa0470150 | 0.802514 | 5.410222e-49 | -8.615850e-47 |
| Msa0461550 | Msa0470150 | 0.805039 | 1.618401e-49 | -8.615850e-47 |
| Msa0467690 | Msa0470150 | 0.811254 | 7.673945e-51 | -8.615850e-47 |
| Msa0470150 | Msa0507810 | 0.815908 | 7.264809e-52 | -8.615850e-47 |
| Msa0470150 | Msa0507820 | 0.817949 | 2.528837e-52 | -8.615850e-47 |
| Msa0470150 | Msa0514020 | 0.806307 | 8.764360e-50 | -8.615850e-47 |
| Msa0470150 | Msa0527850 | 0.825952 | 3.541017e-54 | -8.615850e-47 |
| Msa0470150 | Msa0544410 | 0.803710 | 3.061998e-49 | -8.615850e-47 |
| Msa0470150 | Msa0554300 | 0.817289 | 3.561494e-52 | -8.615850e-47 |
| Msa0470150 | Msa0582460 | 0.818741 | 1.672862e-52 | -8.615850e-47 |
| Msa0470150 | Msa0586200 | 0.805824 | 1.107797e-49 | -8.615850e-47 |
| Msa0470150 | Msa0640800 | 0.807233 | 5.586123e-50 | -8.615850e-47 |
| Msa0470150 | Msa0648760 | 0.820825 | 5.590255e-53 | -8.615850e-47 |
| Msa0470150 | Msa0663290 | 0.819011 | 1.452598e-52 | -8.615850e-47 |
| Msa0470150 | Msa0664070 | 0.811089 | 8.335415e-51 | -8.615850e-47 |
| Msa0470150 | Msa0688620 | 0.806008 | 1.013215e-49 | -8.615850e-47 |
| Msa0470150 | Msa0690320 | 0.803104 | 4.086877e-49 | -8.615850e-47 |
| Msa0470150 | Msa0750520 | 0.803820 | 2.905150e-49 | -8.615850e-47 |
| Msa0470150 | Msa0751720 | 0.801122 | 1.044889e-48 | -8.615850e-47 |
| Msa0470150 | Msa0841500 | 0.811797 | 5.850623e-51 | -8.615850e-47 |
| Msa0470150 | Msa1071410 | 0.808250 | 3.396946e-50 | -8.615850e-47 |
| Msa0470150 | Msa1078860 | 0.812194 | 4.792714e-51 | -8.615850e-47 |
| Msa0470150 | Msa1078990 | 0.814788 | 1.288865e-51 | -8.615850e-47 |
| Msa0470150 | Msa1119380 | 0.803953 | 2.725262e-49 | -8.615850e-47 |
| Msa0470150 | Msa1166820 | 0.800740 | 1.250478e-48 | -8.615850e-47 |
| Msa0470150 | Msa1169170 | 0.820770 | 5.754599e-53 | -8.615850e-47 |
| Msa0470150 | Msa1372030 | 0.800853 | 1.186073e-48 | -8.615850e-47 |
| Msa0470150 | Msa1381800 | 0.810105 | 1.360264e-50 | -8.615850e-47 |
| Msa0470150 | Msa1390210 | 0.809669 | 1.687968e-50 | -8.615850e-47 |
| Msa0470150 | Msa1432060 | 0.809008 | 2.339656e-50 | -8.615850e-47 |
| Msa0249870 | Msa0470150 | 0.811865 | 5.653669e-51 | -8.615850e-47 |
| Msa0260570 | Msa0470150 | 0.803323 | 3.683191e-49 | -8.615850e-47 |
| Msa0260630 | Msa0470150 | 0.825388 | 4.817049e-54 | -8.615850e-47 |
| Msa0281540 | Msa0470150 | 0.827726 | 1.334434e-54 | -8.615850e-47 |
| Msa0288400 | Msa0470150 | 0.800332 | 1.514512e-48 | -8.615850e-47 |
| Msa0320580 | Msa0470150 | 0.827317 | 1.672896e-54 | -8.615850e-47 |
| Msa0342220 | Msa0470150 | 0.810702 | 1.010930e-50 | -8.615850e-47 |
| Msa0344110 | Msa0470150 | 0.828502 | 8.673694e-55 | -8.615850e-47 |
| Msa0346690 | Msa0470150 | 0.809550 | 1.789893e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470150 | MtrunA17_Chr3g0077681 | 92.908 | 705 | 35 | 5 | 1 | 694 | 1 | 701 | 0.0 | 1310 |
| Msa0470150 | MtrunA17_Chr7g0249681 | 49.080 | 163 | 81 | 2 | 1 | 162 | 1 | 162 | 1.92e-37 | 150 |
| Msa0470150 | MtrunA17_Chr7g0226281 | 38.732 | 142 | 76 | 4 | 9 | 146 | 4 | 138 | 2.00e-18 | 90.1 |
| Msa0470150 | MtrunA17_Chr7g0226281 | 38.182 | 110 | 61 | 3 | 583 | 691 | 666 | 769 | 1.50e-11 | 67.8 |
| Msa0470150 | MtrunA17_Chr3g0087321 | 46.512 | 86 | 43 | 1 | 43 | 125 | 14 | 99 | 1.06e-17 | 79.0 |
| Msa0470150 | MtrunA17_Chr5g0437491 | 33.913 | 115 | 73 | 1 | 1 | 112 | 1 | 115 | 4.70e-17 | 80.9 |
| Msa0470150 | MtrunA17_Chr5g0436101 | 33.621 | 116 | 74 | 1 | 1 | 113 | 1 | 116 | 2.18e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0470150 | AT3G59550.1 | 36.478 | 477 | 253 | 13 | 1 | 454 | 1 | 450 | 1.70e-66 | 232 |
| Msa0470150 | AT5G16270.1 | 49.080 | 163 | 81 | 2 | 1 | 162 | 1 | 162 | 2.51e-38 | 153 |
| Msa0470150 | AT5G16270.1 | 47.500 | 80 | 40 | 1 | 613 | 692 | 952 | 1029 | 9.21e-11 | 65.9 |
| Msa0470150 | AT5G40840.4 | 40.237 | 169 | 87 | 5 | 1 | 161 | 1 | 163 | 1.05e-26 | 116 |
| Msa0470150 | AT5G40840.2 | 40.237 | 169 | 87 | 5 | 1 | 161 | 1 | 163 | 1.63e-26 | 116 |
| Msa0470150 | AT5G40840.1 | 40.237 | 169 | 87 | 5 | 1 | 161 | 1 | 163 | 1.70e-26 | 116 |
| Msa0470150 | AT5G05490.2 | 33.884 | 121 | 77 | 1 | 1 | 118 | 1 | 121 | 8.42e-16 | 81.6 |
| Msa0470150 | AT5G05490.1 | 32.759 | 116 | 75 | 1 | 6 | 118 | 16 | 131 | 1.77e-13 | 74.3 |
| Msa0470150 | AT4G05360.1 | 28.159 | 277 | 146 | 10 | 389 | 662 | 90 | 316 | 4.53e-12 | 70.1 |
Find 210 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATAATTTCAGAGAAAT+TGG | 0.155134 | 3_3:+72198026 | None:intergenic |
| ATCTCCGGTGCATCTGTTAT+TGG | 0.224978 | 3_3:+72194447 | None:intergenic |
| GGCTCATCAACAACGATTTC+AGG | 0.226741 | 3_3:+72194468 | None:intergenic |
| TAGGATGTTCTTTGAAGTTT+TGG | 0.239810 | 3_3:-72193268 | Msa0470150:intron |
| ATTTCAGGTGCATCAGTTAT+TGG | 0.240679 | 3_3:+72194483 | None:intergenic |
| CTAAGAGATGGTTCAGAAAT+TGG | 0.243750 | 3_3:+72195180 | None:intergenic |
| ATTTCAGGTGCATCAGTTAT+TGG | 0.256541 | 3_3:+72194519 | None:intergenic |
| ACTGAAGAGCAAAAGGTTTA+AGG | 0.266284 | 3_3:-72194782 | Msa0470150:CDS |
| CCTGTCCTTGCTCCATTTGA+TGG | 0.272790 | 3_3:+72195094 | None:intergenic |
| GTGGTCTAGCTGGTTGAGTT+GGG | 0.275763 | 3_3:+72195333 | None:intergenic |
| TGGTAGTATGTGACTCTATA+TGG | 0.278279 | 3_3:+72195549 | None:intergenic |
| CCCTGTCCTTGCTCCATTTG+AGG | 0.279733 | 3_3:+72195063 | None:intergenic |
| GGCTCGTCAACAGCAATTTC+AGG | 0.282832 | 3_3:+72194504 | None:intergenic |
| CTGGGGTTCCCATTGCATTA+AGG | 0.284115 | 3_3:-72196422 | Msa0470150:CDS |
| TTTGACCAGCCTTTATTTAC+AGG | 0.284947 | 3_3:-72194751 | Msa0470150:intron |
| GTATGTTGCGAGTATCATTA+AGG | 0.309719 | 3_3:+72194845 | None:intergenic |
| TTTGGTCTTGCATCAGAATC+TGG | 0.310278 | 3_3:+72195734 | None:intergenic |
| TCGTCAGCAACTTGATTAAT+TGG | 0.312082 | 3_3:+72194543 | None:intergenic |
| TGGATCTCAGGAATCATTTC+AGG | 0.317785 | 3_3:+72195368 | None:intergenic |
| TAGCCATCATCATATCTTTC+AGG | 0.318226 | 3_3:-72195510 | Msa0470150:CDS |
| TTACCTATTTGGTAACACTA+TGG | 0.321043 | 3_3:+72194981 | None:intergenic |
| GTAAAATACACATTTCTAAA+GGG | 0.327633 | 3_3:+72192857 | None:intergenic |
| GTCGCAACACCTCCTTTATT+AGG | 0.328789 | 3_3:+72194330 | None:intergenic |
| ACATAATTATCCACTATAAT+AGG | 0.329035 | 3_3:+72195908 | None:intergenic |
| AGAAGTATTGATACATTGTC+TGG | 0.334456 | 3_3:-72193576 | Msa0470150:CDS |
| CAAGATGAGATTACTCTTGC+AGG | 0.335666 | 3_3:-72196026 | Msa0470150:intron |
| CTGATAATTTCAGAGAAATT+GGG | 0.337129 | 3_3:+72198027 | None:intergenic |
| TTACCTTAAGAGTAAATTAG+AGG | 0.341041 | 3_3:-72192838 | Msa0470150:three_prime_UTR |
| TTTCTCTTCCTTACTCTTTG+AGG | 0.341054 | 3_3:+72195021 | None:intergenic |
| TACCCTTGTCGGTGGAGATT+GGG | 0.342711 | 3_3:+72195601 | None:intergenic |
| CTCTGTCCCTGCTCCATTTG+AGG | 0.349871 | 3_3:+72195123 | None:intergenic |
| TTTCAGCTTGAACAAGATCT+TGG | 0.350159 | 3_3:-72193316 | Msa0470150:CDS |
| GCGAAAGGACGTCACTGCTT+TGG | 0.352534 | 3_3:-72194815 | Msa0470150:CDS |
| GCAAGGACAGGGTCAGGATC+AGG | 0.353115 | 3_3:-72195052 | Msa0470150:CDS |
| CGAAAGGACGTCACTGCTTT+GGG | 0.353338 | 3_3:-72194814 | Msa0470150:CDS |
| AAAGCTTACTCTTCCTCATT+TGG | 0.357256 | 3_3:+72195716 | None:intergenic |
| TGAAAATATTCCAACAGATA+TGG | 0.360614 | 3_3:-72195426 | Msa0470150:CDS |
| CAATTTCTGAACCATCTCTT+AGG | 0.361011 | 3_3:-72195179 | Msa0470150:CDS |
| TAACCTCTAATTTACTCTTA+AGG | 0.361180 | 3_3:+72192835 | None:intergenic |
| GTTTCTTTCAGAGCATATAA+TGG | 0.371261 | 3_3:-72196448 | Msa0470150:intron |
| CGAGCTCATGCATCAGAAAC+TGG | 0.372324 | 3_3:-72194255 | Msa0470150:CDS |
| TAGTCCCTGATGTAAATTAG+AGG | 0.375577 | 3_3:-72192885 | Msa0470150:three_prime_UTR |
| CCTTGCTCCATTTGAGGAAC+AGG | 0.376880 | 3_3:+72195069 | None:intergenic |
| ACCCCATAGTGTTACCAAAT+AGG | 0.380002 | 3_3:-72194984 | Msa0470150:intron |
| CTACCCTTGTCGGTGGAGAT+TGG | 0.384833 | 3_3:+72195600 | None:intergenic |
| ATGTCGGCTCACCTACTCTT+AGG | 0.390118 | 3_3:-72196399 | Msa0470150:CDS |
| ATTTACATCAGGGACTAAAC+TGG | 0.396765 | 3_3:+72192891 | None:intergenic |
| AGTGGTCTAGCTGGTTGAGT+TGG | 0.397191 | 3_3:+72195332 | None:intergenic |
| AATCAATTTATCAGTTCTGC+TGG | 0.398938 | 3_3:-72194177 | Msa0470150:CDS |
| GAACAGCTACCTGTAAATAA+AGG | 0.399524 | 3_3:+72194742 | None:intergenic |
| GAGGGATCGCGAAGAGCTTC+CGG | 0.400091 | 3_3:+72195461 | None:intergenic |
| TCAGTGTCTTTGCTTTGAGT+TGG | 0.403840 | 3_3:+72194381 | None:intergenic |
| AAATCTTCAGCAGGTTGCTC+TGG | 0.405352 | 3_3:+72193336 | None:intergenic |
| GGTAAAATACACATTTCTAA+AGG | 0.410067 | 3_3:+72192856 | None:intergenic |
| AGATAATCCCAAGTGCTTAC+AGG | 0.417460 | 3_3:-72194356 | Msa0470150:CDS |
| AAACTTGAGGAGAAATCATA+AGG | 0.420722 | 3_3:+72192743 | None:intergenic |
| TTGTTATATTGCAGGACCTC+TGG | 0.425634 | 3_3:-72193776 | Msa0470150:intron |
| GTTAACCTCTAATTTACATC+AGG | 0.427592 | 3_3:+72192880 | None:intergenic |
| CAGTGTCTTTGCTTTGAGTT+GGG | 0.431920 | 3_3:+72194382 | None:intergenic |
| TGGTCTAGCTGGTTGAGTTG+GGG | 0.437964 | 3_3:+72195334 | None:intergenic |
| GGCTATGAAATAGATATTAA+CGG | 0.439404 | 3_3:-72196195 | Msa0470150:CDS |
| GGGGTTTCAGCATGGATCTC+AGG | 0.440280 | 3_3:+72195356 | None:intergenic |
| TACCTATTTGGTAACACTAT+GGG | 0.440577 | 3_3:+72194982 | None:intergenic |
| TCTGTCCCTGCTCCATTTGA+GGG | 0.440810 | 3_3:+72195124 | None:intergenic |
| ACAGGGTCCTGTTCCTCAAA+TGG | 0.443666 | 3_3:-72195076 | Msa0470150:CDS |
| TGAGAAGCATCTGGAGTTAG+TGG | 0.447149 | 3_3:+72195314 | None:intergenic |
| CGACAAAACTGTTCATGAAA+AGG | 0.448116 | 3_3:-72195399 | Msa0470150:CDS |
| TATGTTGCGAGTATCATTAA+GGG | 0.449065 | 3_3:+72194846 | None:intergenic |
| TCTCATGGTGGCGCCTCAGA+TGG | 0.456879 | 3_3:-72195296 | Msa0470150:CDS |
| TCCTCAAATGGAGCAAGGAC+AGG | 0.460930 | 3_3:-72195064 | Msa0470150:CDS |
| ACGTCACTGCTTTGGGCGCA+TGG | 0.461948 | 3_3:-72194807 | Msa0470150:CDS |
| GACCTTGATGCGCTTAACTT+AGG | 0.464421 | 3_3:-72196216 | Msa0470150:CDS |
| TCCTACCCCTCAAATGGAGC+AGG | 0.465260 | 3_3:-72195130 | Msa0470150:CDS |
| CTGTCCTTGCTCCATTTGAT+GGG | 0.465308 | 3_3:+72195095 | None:intergenic |
| TCAGAGCATATAATGGATCC+TGG | 0.468440 | 3_3:-72196441 | Msa0470150:intron |
| GTCTAGCTGGTTGAGTTGGG+GGG | 0.474367 | 3_3:+72195336 | None:intergenic |
| AAGGACCACTCTCAACGGTT+TGG | 0.474786 | 3_3:-72197930 | Msa0470150:CDS |
| GCTTACAGGAGTCCTAATAA+AGG | 0.475665 | 3_3:-72194342 | Msa0470150:CDS |
| AGGTGTTGCGACTCCTACTT+CGG | 0.476216 | 3_3:-72194319 | Msa0470150:CDS |
| GTACAACAAGAGGAGCCTTA+TGG | 0.477197 | 3_3:-72192983 | Msa0470150:CDS |
| TTCAAGCTGAAATCTTCAGC+AGG | 0.477953 | 3_3:+72193327 | None:intergenic |
| GCGCCACCATGAGAAGCATC+TGG | 0.477979 | 3_3:+72195305 | None:intergenic |
| CTTTGAGTTGGGATAGTGGC+AGG | 0.478045 | 3_3:+72194393 | None:intergenic |
| GCTATGAAATAGATATTAAC+GGG | 0.482884 | 3_3:-72196194 | Msa0470150:intron |
| ATCTCCACCGACAAGGGTAG+TGG | 0.483754 | 3_3:-72195597 | Msa0470150:CDS |
| TTTGCTTTGAGTTGGGATAG+TGG | 0.485270 | 3_3:+72194389 | None:intergenic |
| GGTGCTTGCCTCGCATCCTC+AGG | 0.489055 | 3_3:+72196270 | None:intergenic |
| ACAGAGTTCTACCCATCAAA+TGG | 0.492093 | 3_3:-72195106 | Msa0470150:CDS |
| AATGGAGCAAGGACAGGGTC+AGG | 0.495980 | 3_3:-72195058 | Msa0470150:CDS |
| GTGAGAGGCCTCAAAGAGTA+AGG | 0.496584 | 3_3:-72195029 | Msa0470150:CDS |
| CCATCAAATGGAGCAAGGAC+AGG | 0.497665 | 3_3:-72195094 | Msa0470150:CDS |
| GCCTCAGATGGACAAGTTCA+TGG | 0.497833 | 3_3:-72195284 | Msa0470150:CDS |
| GAGACAATGCGTTCAATCTC+CGG | 0.498235 | 3_3:+72194432 | None:intergenic |
| TGCTCTGGAATTGTTGTACA+TGG | 0.498335 | 3_3:+72193351 | None:intergenic |
| CAATATTGCAGTCGTTAAGA+AGG | 0.498688 | 3_3:+72196343 | None:intergenic |
| GCCGACATCCTTAATGCAAT+GGG | 0.499582 | 3_3:+72196414 | None:intergenic |
| GACTCCTACTTCGGTTTCTG+AGG | 0.501640 | 3_3:-72194310 | Msa0470150:CDS |
| GGTCTAGCTGGTTGAGTTGG+GGG | 0.503022 | 3_3:+72195335 | None:intergenic |
| AGCTTGAACAAGATCTTGGA+TGG | 0.504519 | 3_3:-72193312 | Msa0470150:CDS |
| ATGTTATCATGATATGTGCT+AGG | 0.504604 | 3_3:+72194228 | None:intergenic |
| CGAGGTGATGTTGCACCGTA+TGG | 0.509861 | 3_3:+72194276 | None:intergenic |
| GGTGGCGGTTGTGCATTTGA+AGG | 0.510426 | 3_3:+72195755 | None:intergenic |
| CCCTGCTCCATTTGAGGGGT+AGG | 0.511548 | 3_3:+72195129 | None:intergenic |
| CATCTCCGAGGAAGATCATC+CGG | 0.513601 | 3_3:-72194586 | Msa0470150:CDS |
| CGGTTGTGCATTTGAAGGAC+TGG | 0.515647 | 3_3:+72195760 | None:intergenic |
| TGAACATCCACTACCCTTGT+CGG | 0.515801 | 3_3:+72195590 | None:intergenic |
| GGAGTAATAGTAGTATTATC+CGG | 0.515972 | 3_3:+72194567 | None:intergenic |
| TACTTCGGTTTCTGAGGGAA+TGG | 0.516748 | 3_3:-72194304 | Msa0470150:CDS |
| AACTTATAAACATACAAAGA+AGG | 0.517826 | 3_3:-72194638 | Msa0470150:CDS |
| GGTAGTATGTGACTCTATAT+GGG | 0.520004 | 3_3:+72195550 | None:intergenic |
| TTGAAGCTAATATCACCATA+AGG | 0.520542 | 3_3:+72192968 | None:intergenic |
| TTCTGATGCAAGACCAAATG+AGG | 0.521224 | 3_3:-72195729 | Msa0470150:CDS |
| TATTATAGTGGATAATTATG+TGG | 0.525323 | 3_3:-72195906 | Msa0470150:CDS |
| AAAACAAGAAATAAAATCCA+AGG | 0.526081 | 3_3:+72192805 | None:intergenic |
| GATGCTTCCTACCCCTCAAA+TGG | 0.526984 | 3_3:-72195136 | Msa0470150:CDS |
| AGCTACCTGTAAATAAAGGC+TGG | 0.529463 | 3_3:+72194746 | None:intergenic |
| CATGGGAACTGAAGAGCAAA+AGG | 0.532189 | 3_3:-72194789 | Msa0470150:CDS |
| AGCCGACATCCTTAATGCAA+TGG | 0.534742 | 3_3:+72196413 | None:intergenic |
| TCCCATTGCATTAAGGATGT+CGG | 0.538243 | 3_3:-72196415 | Msa0470150:CDS |
| TCTGGAGTTAGTGGTCTAGC+TGG | 0.538631 | 3_3:+72195323 | None:intergenic |
| TTAGGACTCCTGTAAGCACT+TGG | 0.539155 | 3_3:+72194348 | None:intergenic |
| ATACATTGTCTGGGAGGACT+AGG | 0.539433 | 3_3:-72193566 | Msa0470150:intron |
| TCAGCAACTTGATTAATTGG+AGG | 0.542703 | 3_3:+72194546 | None:intergenic |
| TTGTCGATATCCATATCTGT+TGG | 0.543539 | 3_3:+72195416 | None:intergenic |
| ACCCTTGTCGGTGGAGATTG+GGG | 0.545746 | 3_3:+72195602 | None:intergenic |
| CAGAGCATATAATGGATCCT+GGG | 0.547443 | 3_3:-72196440 | Msa0470150:CDS |
| TGTGACTCTATATGGGAACT+TGG | 0.549330 | 3_3:+72195557 | None:intergenic |
| AAGGTCAAAAGTGGCTGGCA+TGG | 0.550608 | 3_3:+72196233 | None:intergenic |
| CAAGGACAGGGTCAGGATCA+GGG | 0.553698 | 3_3:-72195051 | Msa0470150:CDS |
| TGATAATTTCAGAGAAATTG+GGG | 0.554721 | 3_3:+72198028 | None:intergenic |
| GCATCAAGGTCAAAAGTGGC+TGG | 0.555614 | 3_3:+72196228 | None:intergenic |
| CTTAATGCAATGGGAACCCC+AGG | 0.556697 | 3_3:+72196423 | None:intergenic |
| TTCCCCAATCTCCACCGACA+AGG | 0.556745 | 3_3:-72195604 | Msa0470150:CDS |
| CGTCACTGCTTTGGGCGCAT+GGG | 0.557386 | 3_3:-72194806 | Msa0470150:CDS |
| AGGGTCAGGATCAGGGTGAG+AGG | 0.558925 | 3_3:-72195044 | Msa0470150:CDS |
| TAAAATACACATTTCTAAAG+GGG | 0.568883 | 3_3:+72192858 | None:intergenic |
| AAAATAGAACATACTGGCTG+TGG | 0.573158 | 3_3:+72193728 | None:intergenic |
| TGAGGATGCGAGGCAAGCAC+CGG | 0.574961 | 3_3:-72196268 | Msa0470150:CDS |
| TTGGTTGTGTCTTAGGTATG+AGG | 0.575285 | 3_3:-72196066 | Msa0470150:intron |
| AAACAAGAAATAAAATCCAA+GGG | 0.576677 | 3_3:+72192806 | None:intergenic |
| CATCAAATGGAGCAAGGACA+GGG | 0.576993 | 3_3:-72195093 | Msa0470150:CDS |
| TCTAGCTGGTTGAGTTGGGG+GGG | 0.577025 | 3_3:+72195337 | None:intergenic |
| GCTATCGTCACTATTATGAC+TGG | 0.577246 | 3_3:+72195529 | None:intergenic |
| AACAAGAAATAAAATCCAAG+GGG | 0.580746 | 3_3:+72192807 | None:intergenic |
| AAGCGCATCAAGGTCAAAAG+TGG | 0.581334 | 3_3:+72196224 | None:intergenic |
| AATAATGCTATCAAAACTTG+AGG | 0.585089 | 3_3:+72192730 | None:intergenic |
| TCCATGAACTTGTCCATCTG+AGG | 0.585386 | 3_3:+72195283 | None:intergenic |
| ACTCCTACTTCGGTTTCTGA+GGG | 0.585793 | 3_3:-72194309 | Msa0470150:CDS |
| TGTTATCATGATATGTGCTA+GGG | 0.586588 | 3_3:+72194229 | None:intergenic |
| GATCCTGAAAGATATGATGA+TGG | 0.587656 | 3_3:+72195507 | None:intergenic |
| TAGGACTCCTGTAAGCACTT+GGG | 0.589038 | 3_3:+72194349 | None:intergenic |
| AAACTAGAAAGATTGCTGCT+AGG | 0.590045 | 3_3:-72193287 | Msa0470150:CDS |
| ACCTATTTGGTAACACTATG+GGG | 0.591558 | 3_3:+72194983 | None:intergenic |
| TCCCCAATCTCCACCGACAA+GGG | 0.591628 | 3_3:-72195603 | Msa0470150:CDS |
| ACTTATAAACATACAAAGAA+GGG | 0.591939 | 3_3:-72194637 | Msa0470150:CDS |
| TAGAACATACTGGCTGTGGC+TGG | 0.594523 | 3_3:+72193732 | None:intergenic |
| AGCCTAAGTTAAGCGCATCA+AGG | 0.594597 | 3_3:+72196214 | None:intergenic |
| GAAGTATTGATACATTGTCT+GGG | 0.594902 | 3_3:-72193575 | Msa0470150:CDS |
| GATTAGTATCTGAAAAGTCA+TGG | 0.596164 | 3_3:+72194196 | None:intergenic |
| AAAGAACAACTCCTAAGAGA+TGG | 0.596677 | 3_3:+72195168 | None:intergenic |
| ATTCCCTCAGAAACCGAAGT+AGG | 0.596700 | 3_3:+72194306 | None:intergenic |
| CCTCAAATGGAGCAAGGACA+GGG | 0.597645 | 3_3:-72195063 | Msa0470150:CDS |
| TGAGCCAATAACAGATGCAC+CGG | 0.598552 | 3_3:-72194451 | Msa0470150:CDS |
| GGGTACTTACGAACAGTGGA+GGG | 0.600864 | 3_3:+72197850 | None:intergenic |
| TCTTATTGATGTACAACAAG+AGG | 0.600944 | 3_3:-72192993 | Msa0470150:CDS |
| TATATGTTCAAAACCTCACT+TGG | 0.605236 | 3_3:-72194610 | Msa0470150:CDS |
| CTGTCCCTGCTCCATTTGAG+GGG | 0.606362 | 3_3:+72195125 | None:intergenic |
| ATTATCCGGATGATCTTCCT+CGG | 0.614080 | 3_3:+72194581 | None:intergenic |
| GTTTCTGATGCATGAGCTCG+AGG | 0.615602 | 3_3:+72194258 | None:intergenic |
| AGATCGAAGTCCTATTATAG+TGG | 0.617554 | 3_3:-72195918 | Msa0470150:CDS |
| CTAACTCCAGATGCTTCTCA+TGG | 0.617946 | 3_3:-72195311 | Msa0470150:CDS |
| GGCATGGTAATAGAATGAAC+CGG | 0.619797 | 3_3:+72196249 | None:intergenic |
| GCGATCCAAACCGTTGAGAG+TGG | 0.624581 | 3_3:+72197925 | None:intergenic |
| AGGGTAGTGGATGTTCAAGA+TGG | 0.628123 | 3_3:-72195584 | Msa0470150:CDS |
| GCGAAAAGGACCACTCTCAA+CGG | 0.628985 | 3_3:-72197935 | Msa0470150:CDS |
| TACAAAACAGACATTGCCAC+CGG | 0.629206 | 3_3:-72195480 | Msa0470150:CDS |
| GAAGAGCAAAAGGTTTAAGG+AGG | 0.629432 | 3_3:-72194779 | Msa0470150:CDS |
| TTAGGTATGAGGATGTTCAC+AGG | 0.630659 | 3_3:-72196055 | Msa0470150:intron |
| TCCTCGGAGATGACCAAGTG+AGG | 0.635663 | 3_3:+72194597 | None:intergenic |
| GGCAGGTTGATCATCAGCAA+CGG | 0.636374 | 3_3:+72194410 | None:intergenic |
| AGAGCATATAATGGATCCTG+GGG | 0.637648 | 3_3:-72196439 | Msa0470150:CDS |
| GAGGGAATGGAGATACCATA+CGG | 0.637693 | 3_3:-72194291 | Msa0470150:CDS |
| CCTGTTCCTCAAATGGAGCA+AGG | 0.639890 | 3_3:-72195069 | Msa0470150:CDS |
| GGTCTTGCATCAGAATCTGG+TGG | 0.641603 | 3_3:+72195737 | None:intergenic |
| CTTGCATCAGAATCTGGTGG+CGG | 0.641738 | 3_3:+72195740 | None:intergenic |
| TAAAGGGTACTTACGAACAG+TGG | 0.644432 | 3_3:+72197846 | None:intergenic |
| ACACTCTACCTGAGGATGCG+AGG | 0.644444 | 3_3:-72196278 | Msa0470150:CDS |
| TTAACCTCTAATTTACATCA+GGG | 0.646175 | 3_3:+72192881 | None:intergenic |
| ATCAAATAACACTCTACCTG+AGG | 0.646486 | 3_3:-72196286 | Msa0470150:CDS |
| GTAGTGGATGTTCAAGATGG+TGG | 0.648922 | 3_3:-72195581 | Msa0470150:CDS |
| TACAGGAGTCCTAATAAAGG+AGG | 0.651779 | 3_3:-72194339 | Msa0470150:CDS |
| CAACATACGAAGGAAGCGAA+AGG | 0.653048 | 3_3:-72194830 | Msa0470150:CDS |
| AGGGTACTTACGAACAGTGG+AGG | 0.653985 | 3_3:+72197849 | None:intergenic |
| TACGAACAACACCTAAGAGT+AGG | 0.654224 | 3_3:+72196388 | None:intergenic |
| TCTACCCATCAAATGGAGCA+AGG | 0.655123 | 3_3:-72195099 | Msa0470150:CDS |
| ACTCCAGATGCTTCTCATGG+TGG | 0.657514 | 3_3:-72195308 | Msa0470150:CDS |
| ATGATACTCGCAACATACGA+AGG | 0.658966 | 3_3:-72194840 | Msa0470150:CDS |
| ACCTCACTTGGTCATCTCCG+AGG | 0.663917 | 3_3:-72194598 | Msa0470150:CDS |
| TGTGCATTTGAAGGACTGGA+TGG | 0.666531 | 3_3:+72195764 | None:intergenic |
| ACATCCACTACCCTTGTCGG+TGG | 0.667254 | 3_3:+72195593 | None:intergenic |
| CCTACCCCTCAAATGGAGCA+GGG | 0.672267 | 3_3:-72195129 | Msa0470150:CDS |
| AAGAGCAAAAGGTTTAAGGA+GGG | 0.683424 | 3_3:-72194778 | Msa0470150:CDS |
| TGTGGCTATACGTTTCGATG+AGG | 0.683845 | 3_3:-72195888 | Msa0470150:intron |
| GTATTGATACATTGTCTGGG+AGG | 0.691781 | 3_3:-72193572 | Msa0470150:CDS |
| TATCTTCTTCGAGAAACCAG+AGG | 0.692196 | 3_3:+72193760 | None:intergenic |
| GGATCGCGAAGAGCTTCCGG+TGG | 0.705021 | 3_3:+72195464 | None:intergenic |
| GGTATGAGGATGTTCACAGG+AGG | 0.722754 | 3_3:-72196052 | Msa0470150:CDS |
| GTTATCATGATATGTGCTAG+GGG | 0.726681 | 3_3:+72194230 | None:intergenic |
| ACAAGAAATAAAATCCAAGG+GGG | 0.743028 | 3_3:+72192808 | None:intergenic |
| TCAGATGGACAAGTTCATGG+AGG | 0.765200 | 3_3:-72195281 | Msa0470150:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTGTCTAT+TGG | - | chr3_3:72193646-72193665 | Msa0470150:intron | 10.0% |
| !!! | TTTTTTTTTTTTTGTCTATT+GGG | - | chr3_3:72193647-72193666 | Msa0470150:intron | 10.0% |
| !! | CAAATATTAAAAAATTTGTA+TGG | + | chr3_3:72193683-72193702 | None:intergenic | 10.0% |
| !! | ATAATAAAATAAAACTATCA+TGG | + | chr3_3:72193827-72193846 | None:intergenic | 10.0% |
| !!! | AGAAAAATCAATTTTTTTAA+TGG | + | chr3_3:72194036-72194055 | None:intergenic | 10.0% |
| !!! | TATCAATTTATTACTATTTT+AGG | - | chr3_3:72197229-72197248 | Msa0470150:intron | 10.0% |
| !!! | AAAATATTAAATTTTAGCTT+TGG | + | chr3_3:72197843-72197862 | None:intergenic | 10.0% |
| !!! | TATTTCTTGTTTTTTTTTAT+AGG | - | chr3_3:72197973-72197992 | Msa0470150:exon | 10.0% |
| !!! | TTTTTAATATTTGAGTGTAT+TGG | - | chr3_3:72193690-72193709 | Msa0470150:intron | 15.0% |
| !!! | ATTTAGATATTTTGTTTCTT+AGG | - | chr3_3:72193858-72193877 | Msa0470150:intron | 15.0% |
| !! | AAAACTAAGGTAATAAAAAT+CGG | + | chr3_3:72194207-72194226 | None:intergenic | 15.0% |
| !! | ATAATAGTATGAAAAGATAA+AGG | + | chr3_3:72194608-72194627 | None:intergenic | 15.0% |
| !! | AAATTTGTAACTCAAATTAA+AGG | + | chr3_3:72194947-72194966 | None:intergenic | 15.0% |
| !! | ATAACAATGTATTATTCTAT+TGG | + | chr3_3:72195127-72195146 | None:intergenic | 15.0% |
| !! | AATGAAAAAAATTACCTATT+TGG | + | chr3_3:72195801-72195820 | None:intergenic | 15.0% |
| !!! | ATATCAGTTAATTTTTAACT+TGG | + | chr3_3:72197541-72197560 | None:intergenic | 15.0% |
| !!! | TTTTTTCTCAAATTCCTATA+TGG | - | chr3_3:72193001-72193020 | Msa0470150:CDS | 20.0% |
| !!! | TTTTTCTCAAATTCCTATAT+GGG | - | chr3_3:72193002-72193021 | Msa0470150:CDS | 20.0% |
| !!! | ATGATGTTGTTTATTCTATT+GGG | - | chr3_3:72193044-72193063 | Msa0470150:intron | 20.0% |
| !! | AAGTTTATCAAAATTCTATC+TGG | - | chr3_3:72193155-72193174 | Msa0470150:intron | 20.0% |
| !! | AGTTTATCAAAATTCTATCT+GGG | - | chr3_3:72193156-72193175 | Msa0470150:intron | 20.0% |
| !!! | TTTTCTTGATTGAAAACAAA+AGG | - | chr3_3:72194050-72194069 | Msa0470150:intron | 20.0% |
| !! | AAACTAAGGTAATAAAAATC+GGG | + | chr3_3:72194206-72194225 | None:intergenic | 20.0% |
| !! | AACTTCGATTAAAAAAACTA+AGG | + | chr3_3:72194220-72194239 | None:intergenic | 20.0% |
| !!! | TATCAGTTGTATAGAAATTT+TGG | + | chr3_3:72194677-72194696 | None:intergenic | 20.0% |
| !! | CTATACAACTGATATAAAAT+TGG | - | chr3_3:72194683-72194702 | Msa0470150:intron | 20.0% |
| !! | ACATAATTATCCACTATAAT+AGG | + | chr3_3:72194863-72194882 | None:intergenic | 20.0% |
| !!! | TATTATAGTGGATAATTATG+TGG | - | chr3_3:72194862-72194881 | Msa0470150:CDS | 20.0% |
| !!! | ATAAGTTCTATGTTGATAAA+AGG | + | chr3_3:72194923-72194942 | None:intergenic | 20.0% |
| !!! | ACTTGTTTTCTTGTATTTTT+AGG | - | chr3_3:72194976-72194995 | Msa0470150:intron | 20.0% |
| !!! | ATTTTTTCGTATTCAATCTT+AGG | - | chr3_3:72195564-72195583 | Msa0470150:CDS | 20.0% |
| !!! | TTTTTTCGTATTCAATCTTA+GGG | - | chr3_3:72195565-72195584 | Msa0470150:CDS | 20.0% |
| !!! | ATCATTCAATTTGCAAATTT+TGG | - | chr3_3:72196054-72196073 | Msa0470150:CDS | 20.0% |
| !! | AACTTATAAACATACAAAGA+AGG | - | chr3_3:72196130-72196149 | Msa0470150:intron | 20.0% |
| !! | ACTTATAAACATACAAAGAA+GGG | - | chr3_3:72196131-72196150 | Msa0470150:intron | 20.0% |
| !! | ATATACATATGACATATTGT+TGG | - | chr3_3:72196795-72196814 | Msa0470150:intron | 20.0% |
| !! | ACGAAAATATTCATTAACAA+TGG | + | chr3_3:72196834-72196853 | None:intergenic | 20.0% |
| !! | AAGTTATGTTAATATTTGCT+AGG | - | chr3_3:72197102-72197121 | Msa0470150:intron | 20.0% |
| !! | ATAAGTTGTTATGTTAACTT+TGG | - | chr3_3:72197347-72197366 | Msa0470150:intron | 20.0% |
| !! | TAAATAAAAGACAGTTATGT+AGG | + | chr3_3:72197614-72197633 | None:intergenic | 20.0% |
| !! | AAATTGAAGAGTTATATGAT+TGG | - | chr3_3:72197657-72197676 | Msa0470150:intron | 20.0% |
| !!! | TAAAATACACATTTCTAAAG+GGG | + | chr3_3:72197913-72197932 | None:intergenic | 20.0% |
| !! | GTAAAATACACATTTCTAAA+GGG | + | chr3_3:72197914-72197933 | None:intergenic | 20.0% |
| !! | AAACAAGAAATAAAATCCAA+GGG | + | chr3_3:72197965-72197984 | None:intergenic | 20.0% |
| !! | AAAACAAGAAATAAAATCCA+AGG | + | chr3_3:72197966-72197985 | None:intergenic | 20.0% |
| !!! | AAGTTTTGATAGCATTATTT+TGG | - | chr3_3:72198042-72198061 | Msa0470150:five_prime_UTR | 20.0% |
| ! | TGATAATTTCAGAGAAATTG+GGG | + | chr3_3:72192743-72192762 | None:intergenic | 25.0% |
| ! | CTGATAATTTCAGAGAAATT+GGG | + | chr3_3:72192744-72192763 | None:intergenic | 25.0% |
| ! | TCTGATAATTTCAGAGAAAT+TGG | + | chr3_3:72192745-72192764 | None:intergenic | 25.0% |
| !!! | AAAATGGGTTTTGAAGTAAA+GGG | + | chr3_3:72192941-72192960 | None:intergenic | 25.0% |
| !!! | AAAAATGGGTTTTGAAGTAA+AGG | + | chr3_3:72192942-72192961 | None:intergenic | 25.0% |
| ! | AAAAATCACAAAACCCATAT+AGG | + | chr3_3:72193018-72193037 | None:intergenic | 25.0% |
| !!! | TATATGGGTTTTGTGATTTT+TGG | - | chr3_3:72193017-72193036 | Msa0470150:intron | 25.0% |
| !! | GATGATGTTGTTTATTCTAT+TGG | - | chr3_3:72193043-72193062 | Msa0470150:intron | 25.0% |
| ! | GTAATGTTACTCATTCTATT+GGG | - | chr3_3:72193197-72193216 | Msa0470150:intron | 25.0% |
| !! | ATTTTTCTCAAAATCCTATC+TGG | - | chr3_3:72193297-72193316 | Msa0470150:CDS | 25.0% |
| !! | TTTTTCTCAAAATCCTATCT+GGG | - | chr3_3:72193298-72193317 | Msa0470150:CDS | 25.0% |
| !!! | GTTTTTGGATTTTTTTTGAG+CGG | - | chr3_3:72193320-72193339 | Msa0470150:CDS | 25.0% |
| ! | AAGTTTATCAAAAATCCATC+TGG | - | chr3_3:72193390-72193409 | Msa0470150:intron | 25.0% |
| ! | AGTTTATCAAAAATCCATCT+GGG | - | chr3_3:72193391-72193410 | Msa0470150:intron | 25.0% |
| ! | ACTAACTTCAATAACTTTCA+AGG | + | chr3_3:72193756-72193775 | None:intergenic | 25.0% |
| ! | AACAATGTCAATAGATATTG+TGG | + | chr3_3:72193895-72193914 | None:intergenic | 25.0% |
| ! | AAAATCAGATAATGTTACTC+TGG | - | chr3_3:72193960-72193979 | Msa0470150:intron | 25.0% |
| ! | AAATCAGATAATGTTACTCT+GGG | - | chr3_3:72193961-72193980 | Msa0470150:intron | 25.0% |
| !!! | TTCAGTTTTTAAGTGTGTAA+AGG | - | chr3_3:72194239-72194258 | Msa0470150:CDS | 25.0% |
| ! | GGCTATGAAATAGATATTAA+CGG | - | chr3_3:72194573-72194592 | Msa0470150:CDS | 25.0% |
| ! | GCTATGAAATAGATATTAAC+GGG | - | chr3_3:72194574-72194593 | Msa0470150:CDS | 25.0% |
| ! | TATAAAATTGGTTGTGTCTT+AGG | - | chr3_3:72194695-72194714 | Msa0470150:intron | 25.0% |
| !!! | TTATTCTATTGGTTCATAAG+AGG | + | chr3_3:72195116-72195135 | None:intergenic | 25.0% |
| !! | AATATTTTCAACAGCATCAT+TGG | + | chr3_3:72195332-72195351 | None:intergenic | 25.0% |
| ! | TGAAAATATTCCAACAGATA+TGG | - | chr3_3:72195342-72195361 | Msa0470150:CDS | 25.0% |
| !!! | AATAACAGTTTTATGCTGAA+AGG | + | chr3_3:72196689-72196708 | None:intergenic | 25.0% |
| ! | TCATTAACAATGGAACAAAA+CGG | + | chr3_3:72196824-72196843 | None:intergenic | 25.0% |
| ! | AGTTAACATAACAACTTATG+TGG | + | chr3_3:72197346-72197365 | None:intergenic | 25.0% |
| !!! | TTTGGTTCTTCAAAATTTCA+GGG | - | chr3_3:72197365-72197384 | Msa0470150:intron | 25.0% |
| !!! | TATGTAGGTATTTGTTTTGT+TGG | + | chr3_3:72197599-72197618 | None:intergenic | 25.0% |
| !!! | GATATAAGTTTTGGAGATTA+AGG | + | chr3_3:72197721-72197740 | None:intergenic | 25.0% |
| !! | CAACATACAGATATAAGTTT+TGG | + | chr3_3:72197730-72197749 | None:intergenic | 25.0% |
| ! | TTAACCTCTAATTTACATCA+GGG | + | chr3_3:72197890-72197909 | None:intergenic | 25.0% |
| ! | GGTAAAATACACATTTCTAA+AGG | + | chr3_3:72197915-72197934 | None:intergenic | 25.0% |
| ! | TTACCTTAAGAGTAAATTAG+AGG | - | chr3_3:72197930-72197949 | Msa0470150:CDS | 25.0% |
| ! | TAACCTCTAATTTACTCTTA+AGG | + | chr3_3:72197936-72197955 | None:intergenic | 25.0% |
| ! | AACAAGAAATAAAATCCAAG+GGG | + | chr3_3:72197964-72197983 | None:intergenic | 25.0% |
| !!! | ATCATAAGGTTTTAAGTGTA+AGG | + | chr3_3:72198014-72198033 | None:intergenic | 25.0% |
| ! | AATAATGCTATCAAAACTTG+AGG | + | chr3_3:72198041-72198060 | None:intergenic | 25.0% |
| ! | GTTTTACTCTCAAACGTTTT+TGG | - | chr3_3:72192809-72192828 | Msa0470150:three_prime_UTR | 30.0% |
| GGTAATGTTACTCATTCTAT+TGG | - | chr3_3:72193196-72193215 | Msa0470150:intron | 30.0% | |
| AAAAATCCAAAAACCCAGAT+AGG | + | chr3_3:72193314-72193333 | None:intergenic | 30.0% | |
| GGTAATGTTGTTCATTCTAA+TGG | - | chr3_3:72193341-72193360 | Msa0470150:CDS | 30.0% | |
| !!! | GGATTTTAATTTTTCTGCGA+TGG | - | chr3_3:72193362-72193381 | Msa0470150:CDS | 30.0% |
| AAAAAATTCTCAAACCCAGA+TGG | + | chr3_3:72193408-72193427 | None:intergenic | 30.0% | |
| !!! | TCTGGGTTTGAGAATTTTTT+AGG | - | chr3_3:72193408-72193427 | Msa0470150:intron | 30.0% |
| !!! | CTGGGTTTGAGAATTTTTTA+GGG | - | chr3_3:72193409-72193428 | Msa0470150:intron | 30.0% |
| !!! | TGGGTTTGAGAATTTTTTAG+GGG | - | chr3_3:72193410-72193429 | Msa0470150:intron | 30.0% |
| AATGACTGAAAACCCAAATT+GGG | + | chr3_3:72193544-72193563 | None:intergenic | 30.0% | |
| AAATGACTGAAAACCCAAAT+TGG | + | chr3_3:72193545-72193564 | None:intergenic | 30.0% | |
| ! | ATAATGTTACTCTGGGTTTT+CGG | - | chr3_3:72193968-72193987 | Msa0470150:intron | 30.0% |
| GTTTCTTTCAGAGCATATAA+TGG | - | chr3_3:72194320-72194339 | Msa0470150:CDS | 30.0% | |
| ATAAAAGGAATGAAGAGGAA+AGG | + | chr3_3:72194908-72194927 | None:intergenic | 30.0% | |
| ! | TGTTGATAAAAGGAATGAAG+AGG | + | chr3_3:72194913-72194932 | None:intergenic | 30.0% |
| CGTATGTAAATGTAAGAGAA+AGG | + | chr3_3:72195523-72195542 | None:intergenic | 30.0% | |
| ! | TACCTATTTGGTAACACTAT+GGG | + | chr3_3:72195789-72195808 | None:intergenic | 30.0% |
| ! | TTACCTATTTGGTAACACTA+TGG | + | chr3_3:72195790-72195809 | None:intergenic | 30.0% |
| CTTTCTTCATGACTCTATAA+TGG | + | chr3_3:72195902-72195921 | None:intergenic | 30.0% | |
| TATGTTGCGAGTATCATTAA+GGG | + | chr3_3:72195925-72195944 | None:intergenic | 30.0% | |
| TATATGTTCAAAACCTCACT+TGG | - | chr3_3:72196158-72196177 | Msa0470150:intron | 30.0% | |
| GGAGTAATAGTAGTATTATC+CGG | + | chr3_3:72196204-72196223 | None:intergenic | 30.0% | |
| TGTTATCATGATATGTGCTA+GGG | + | chr3_3:72196542-72196561 | None:intergenic | 30.0% | |
| ATGTTATCATGATATGTGCT+AGG | + | chr3_3:72196543-72196562 | None:intergenic | 30.0% | |
| GATTAGTATCTGAAAAGTCA+TGG | + | chr3_3:72196575-72196594 | None:intergenic | 30.0% | |
| AATCAATTTATCAGTTCTGC+TGG | - | chr3_3:72196591-72196610 | Msa0470150:intron | 30.0% | |
| !! | AGTTTTATGCTGAAAGGAAA+TGG | + | chr3_3:72196683-72196702 | None:intergenic | 30.0% |
| ! | TCTTAACCTTGTTATATTGC+AGG | - | chr3_3:72196984-72197003 | Msa0470150:intron | 30.0% |
| GACACAAAAATAGAACATAC+TGG | + | chr3_3:72197049-72197068 | None:intergenic | 30.0% | |
| ! | GACGTAAACTTTTTAATGAC+AGG | - | chr3_3:72197153-72197172 | Msa0470150:intron | 30.0% |
| !! | AGAAGTATTGATACATTGTC+TGG | - | chr3_3:72197192-72197211 | Msa0470150:intron | 30.0% |
| !! | GAAGTATTGATACATTGTCT+GGG | - | chr3_3:72197193-72197212 | Msa0470150:intron | 30.0% |
| !! | CTTTGGTTCTTCAAAATTTC+AGG | - | chr3_3:72197364-72197383 | Msa0470150:intron | 30.0% |
| ! | TTGGTTCTTCAAAATTTCAG+GGG | - | chr3_3:72197366-72197385 | Msa0470150:intron | 30.0% |
| !!! | TAGGATGTTCTTTGAAGTTT+TGG | - | chr3_3:72197500-72197519 | Msa0470150:intron | 30.0% |
| ACTAACTGTCAAATTTGATG+TGG | - | chr3_3:72197633-72197652 | Msa0470150:intron | 30.0% | |
| ATATCTGTATGTTGCATTAC+AGG | - | chr3_3:72197736-72197755 | Msa0470150:intron | 30.0% | |
| TCTTATTGATGTACAACAAG+AGG | - | chr3_3:72197775-72197794 | Msa0470150:intron | 30.0% | |
| TTGAAGCTAATATCACCATA+AGG | + | chr3_3:72197803-72197822 | None:intergenic | 30.0% | |
| GTTAACCTCTAATTTACATC+AGG | + | chr3_3:72197891-72197910 | None:intergenic | 30.0% | |
| ACAAGAAATAAAATCCAAGG+GGG | + | chr3_3:72197963-72197982 | None:intergenic | 30.0% | |
| AAACTTGAGGAGAAATCATA+AGG | + | chr3_3:72198028-72198047 | None:intergenic | 30.0% | |
| !! | ATGGGTTTTGTGATTTTTGG+AGG | - | chr3_3:72193020-72193039 | Msa0470150:intron | 35.0% |
| !! | TGGGTTTTGTGATTTTTGGA+GGG | - | chr3_3:72193021-72193040 | Msa0470150:intron | 35.0% |
| !!! | TCTGGGTTGAGTTTTTTTTG+TGG | - | chr3_3:72193173-72193192 | Msa0470150:intron | 35.0% |
| !!! | CTGGGTTGAGTTTTTTTTGT+GGG | - | chr3_3:72193174-72193193 | Msa0470150:intron | 35.0% |
| !!! | TGGGTTGAGTTTTTTTTGTG+GGG | - | chr3_3:72193175-72193194 | Msa0470150:intron | 35.0% |
| ! | CAAAATCCTATCTGGGTTTT+TGG | - | chr3_3:72193305-72193324 | Msa0470150:CDS | 35.0% |
| !!! | GGGTTTGAGAATTTTTTAGG+GGG | - | chr3_3:72193411-72193430 | Msa0470150:intron | 35.0% |
| ATCAAAACCCAAACCCAATT+TGG | - | chr3_3:72193528-72193547 | Msa0470150:intron | 35.0% | |
| TCAAAACCCAAACCCAATTT+GGG | - | chr3_3:72193529-72193548 | Msa0470150:intron | 35.0% | |
| TGAAAACCCAAATTGGGTTT+GGG | + | chr3_3:72193538-72193557 | None:intergenic | 35.0% | |
| !!! | GTATTGGTTCCTTTTGTGAA+TGG | - | chr3_3:72193706-72193725 | Msa0470150:intron | 35.0% |
| !! | ACTTGCTATGCCATAAAAGT+GGG | + | chr3_3:72194162-72194181 | None:intergenic | 35.0% |
| !! | AACTTGCTATGCCATAAAAG+TGG | + | chr3_3:72194163-72194182 | None:intergenic | 35.0% |
| TAGCAAGTTTCAGCCTTTAT+TGG | - | chr3_3:72194174-72194193 | Msa0470150:CDS | 35.0% | |
| CAATATTGCAGTCGTTAAGA+AGG | + | chr3_3:72194428-72194447 | None:intergenic | 35.0% | |
| ATCAAATAACACTCTACCTG+AGG | - | chr3_3:72194482-72194501 | Msa0470150:CDS | 35.0% | |
| AGATCGAAGTCCTATTATAG+TGG | - | chr3_3:72194850-72194869 | Msa0470150:CDS | 35.0% | |
| AAAGCTTACTCTTCCTCATT+TGG | + | chr3_3:72195055-72195074 | None:intergenic | 35.0% | |
| !!! | AGAGTAAGCTTTGTTGGTTT+TGG | - | chr3_3:72195063-72195082 | Msa0470150:CDS | 35.0% |
| GATTGGGGAATAAATCTACA+AGG | + | chr3_3:72195154-72195173 | None:intergenic | 35.0% | |
| GGTAGTATGTGACTCTATAT+GGG | + | chr3_3:72195221-72195240 | None:intergenic | 35.0% | |
| TGGTAGTATGTGACTCTATA+TGG | + | chr3_3:72195222-72195241 | None:intergenic | 35.0% | |
| TAGCCATCATCATATCTTTC+AGG | - | chr3_3:72195258-72195277 | Msa0470150:intron | 35.0% | |
| GATCCTGAAAGATATGATGA+TGG | + | chr3_3:72195264-72195283 | None:intergenic | 35.0% | |
| ! | TGGCAATGTCTGTTTTGTAA+CGG | + | chr3_3:72195287-72195306 | None:intergenic | 35.0% |
| ! | TTTTCAACAGCATCATTGGA+GGG | + | chr3_3:72195328-72195347 | None:intergenic | 35.0% |
| ! | ATTTTCAACAGCATCATTGG+AGG | + | chr3_3:72195329-72195348 | None:intergenic | 35.0% |
| TTGTCGATATCCATATCTGT+TGG | + | chr3_3:72195355-72195374 | None:intergenic | 35.0% | |
| CGACAAAACTGTTCATGAAA+AGG | - | chr3_3:72195369-72195388 | Msa0470150:CDS | 35.0% | |
| CTAAGAGATGGTTCAGAAAT+TGG | + | chr3_3:72195591-72195610 | None:intergenic | 35.0% | |
| CAATTTCTGAACCATCTCTT+AGG | - | chr3_3:72195589-72195608 | Msa0470150:CDS | 35.0% | |
| AAAGAACAACTCCTAAGAGA+TGG | + | chr3_3:72195603-72195622 | None:intergenic | 35.0% | |
| TTTCTCTTCCTTACTCTTTG+AGG | + | chr3_3:72195750-72195769 | None:intergenic | 35.0% | |
| ! | ACCTATTTGGTAACACTATG+GGG | + | chr3_3:72195788-72195807 | None:intergenic | 35.0% |
| AGAAACGAGTATAGGAAAAC+CGG | + | chr3_3:72195867-72195886 | None:intergenic | 35.0% | |
| CAAACATGAGAAACGAGTAT+AGG | + | chr3_3:72195875-72195894 | None:intergenic | 35.0% | |
| CTATACTCGTTTCTCATGTT+TGG | - | chr3_3:72195873-72195892 | Msa0470150:intron | 35.0% | |
| GTATGTTGCGAGTATCATTA+AGG | + | chr3_3:72195926-72195945 | None:intergenic | 35.0% | |
| ACTGAAGAGCAAAAGGTTTA+AGG | - | chr3_3:72195986-72196005 | Msa0470150:intron | 35.0% | |
| AAGAGCAAAAGGTTTAAGGA+GGG | - | chr3_3:72195990-72196009 | Msa0470150:intron | 35.0% | |
| ! | TTTGACCAGCCTTTATTTAC+AGG | - | chr3_3:72196017-72196036 | Msa0470150:intron | 35.0% |
| GAACAGCTACCTGTAAATAA+AGG | + | chr3_3:72196029-72196048 | None:intergenic | 35.0% | |
| CATTCCTCAATTGAAACTTG+TGG | - | chr3_3:72196083-72196102 | Msa0470150:intron | 35.0% | |
| AAACTTGTGGCTTCTTATTC+AGG | - | chr3_3:72196096-72196115 | Msa0470150:intron | 35.0% | |
| TCAGCAACTTGATTAATTGG+AGG | + | chr3_3:72196225-72196244 | None:intergenic | 35.0% | |
| TCGTCAGCAACTTGATTAAT+TGG | + | chr3_3:72196228-72196247 | None:intergenic | 35.0% | |
| ! | ATTTCAGGTGCATCAGTTAT+TGG | + | chr3_3:72196252-72196271 | None:intergenic | 35.0% |
| ! | ATTTCAGGTGCATCAGTTAT+TGG | + | chr3_3:72196252-72196271 | None:intergenic | 35.0% |
| GTTATCATGATATGTGCTAG+GGG | + | chr3_3:72196541-72196560 | None:intergenic | 35.0% | |
| ATCGTAAGAGAGCAAAAAGA+TGG | + | chr3_3:72196767-72196786 | None:intergenic | 35.0% | |
| ! | TCTTTTTGCTCTCTTACGAT+AGG | - | chr3_3:72196767-72196786 | Msa0470150:intron | 35.0% |
| TTGCACACAATATCCTTGTA+CGG | - | chr3_3:72196917-72196936 | Msa0470150:intron | 35.0% | |
| ! | AAAATAGAACATACTGGCTG+TGG | + | chr3_3:72197043-72197062 | None:intergenic | 35.0% |
| CATTAAATCACCTTAGCGAA+AGG | - | chr3_3:72197290-72197309 | Msa0470150:intron | 35.0% | |
| CTATGGAAAAGCTTTCCATT+TGG | - | chr3_3:72197313-72197332 | Msa0470150:intron | 35.0% | |
| TTTCAGCTTGAACAAGATCT+TGG | - | chr3_3:72197452-72197471 | Msa0470150:intron | 35.0% | |
| AAACTAGAAAGATTGCTGCT+AGG | - | chr3_3:72197481-72197500 | Msa0470150:intron | 35.0% | |
| ATTTACATCAGGGACTAAAC+TGG | + | chr3_3:72197880-72197899 | None:intergenic | 35.0% | |
| TAGTCCCTGATGTAAATTAG+AGG | - | chr3_3:72197883-72197902 | Msa0470150:CDS | 35.0% | |
| !! | TAAAGGGTACTTACGAACAG+TGG | + | chr3_3:72192925-72192944 | None:intergenic | 40.0% |
| CTGAAAACCCAAATTGGGTT+TGG | + | chr3_3:72193539-72193558 | None:intergenic | 40.0% | |
| GAGTCTGTTAGTTCCTATTG+TGG | - | chr3_3:72193568-72193587 | Msa0470150:CDS | 40.0% | |
| TCTGTTAGTTCCTATTGTGG+TGG | - | chr3_3:72193571-72193590 | Msa0470150:CDS | 40.0% | |
| ! | TTGGTTCCTTTTGTGAATGG+TGG | - | chr3_3:72193709-72193728 | Msa0470150:intron | 40.0% |
| ! | TGGTTCCTTTTGTGAATGGT+GGG | - | chr3_3:72193710-72193729 | Msa0470150:intron | 40.0% |
| AGGGACAATGTTACTCTGTA+GGG | - | chr3_3:72194000-72194019 | Msa0470150:intron | 40.0% | |
| !!! | TTGAACTGCCGTTTTTTGAC+CGG | - | chr3_3:72194121-72194140 | Msa0470150:intron | 40.0% |
| !! | CGGTTTGTTTCCCACTTTTA+TGG | - | chr3_3:72194149-72194168 | Msa0470150:intron | 40.0% |
| AATCGGGTAGACTCCAATAA+AGG | + | chr3_3:72194190-72194209 | None:intergenic | 40.0% | |
| !! | TCAGAGCATATAATGGATCC+TGG | - | chr3_3:72194327-72194346 | Msa0470150:CDS | 40.0% |
| !! | CAGAGCATATAATGGATCCT+GGG | - | chr3_3:72194328-72194347 | Msa0470150:CDS | 40.0% |
| !! | AGAGCATATAATGGATCCTG+GGG | - | chr3_3:72194329-72194348 | Msa0470150:CDS | 40.0% |
| TCCCATTGCATTAAGGATGT+CGG | - | chr3_3:72194353-72194372 | Msa0470150:CDS | 40.0% | |
| TACGAACAACACCTAAGAGT+AGG | + | chr3_3:72194383-72194402 | None:intergenic | 40.0% | |
| GGCATGGTAATAGAATGAAC+CGG | + | chr3_3:72194522-72194541 | None:intergenic | 40.0% | |
| TTGGTTGTGTCTTAGGTATG+AGG | - | chr3_3:72194702-72194721 | Msa0470150:intron | 40.0% | |
| TTAGGTATGAGGATGTTCAC+AGG | - | chr3_3:72194713-72194732 | Msa0470150:intron | 40.0% | |
| CAAGATGAGATTACTCTTGC+AGG | - | chr3_3:72194742-72194761 | Msa0470150:intron | 40.0% | |
| ACTCTTGCAGGTTAACTAAG+TGG | - | chr3_3:72194754-72194773 | Msa0470150:CDS | 40.0% | |
| !! | TTTGGTCTTGCATCAGAATC+TGG | + | chr3_3:72195037-72195056 | None:intergenic | 40.0% |
| TTCTGATGCAAGACCAAATG+AGG | - | chr3_3:72195039-72195058 | Msa0470150:CDS | 40.0% | |
| ! | TGAGGAAGAGTAAGCTTTGT+TGG | - | chr3_3:72195057-72195076 | Msa0470150:CDS | 40.0% |
| TGTGACTCTATATGGGAACT+TGG | + | chr3_3:72195214-72195233 | None:intergenic | 40.0% | |
| GCTATCGTCACTATTATGAC+TGG | + | chr3_3:72195242-72195261 | None:intergenic | 40.0% | |
| ! | GGCAATGTCTGTTTTGTAAC+GGG | + | chr3_3:72195286-72195305 | None:intergenic | 40.0% |
| TACAAAACAGACATTGCCAC+CGG | - | chr3_3:72195288-72195307 | Msa0470150:CDS | 40.0% | |
| TGGATCTCAGGAATCATTTC+AGG | + | chr3_3:72195403-72195422 | None:intergenic | 40.0% | |
| ACAGAGTTCTACCCATCAAA+TGG | - | chr3_3:72195662-72195681 | Msa0470150:intron | 40.0% | |
| ACCCCATAGTGTTACCAAAT+AGG | - | chr3_3:72195784-72195803 | Msa0470150:intron | 40.0% | |
| CTACAACATATAGTTACGCC+CGG | - | chr3_3:72195845-72195864 | Msa0470150:intron | 40.0% | |
| GAAACGAGTATAGGAAAACC+GGG | + | chr3_3:72195866-72195885 | None:intergenic | 40.0% | |
| ATGATACTCGCAACATACGA+AGG | - | chr3_3:72195928-72195947 | Msa0470150:intron | 40.0% | |
| GAAGAGCAAAAGGTTTAAGG+AGG | - | chr3_3:72195989-72196008 | Msa0470150:intron | 40.0% | |
| AGCTACCTGTAAATAAAGGC+TGG | + | chr3_3:72196025-72196044 | None:intergenic | 40.0% | |
| GAAGCCACAAGTTTCAATTG+AGG | + | chr3_3:72196090-72196109 | None:intergenic | 40.0% | |
| ATTATCCGGATGATCTTCCT+CGG | + | chr3_3:72196190-72196209 | None:intergenic | 40.0% | |
| !! | TTTGCTTTGAGTTGGGATAG+TGG | + | chr3_3:72196382-72196401 | None:intergenic | 40.0% |
| ! | CAGTGTCTTTGCTTTGAGTT+GGG | + | chr3_3:72196389-72196408 | None:intergenic | 40.0% |
| ! | TCAGTGTCTTTGCTTTGAGT+TGG | + | chr3_3:72196390-72196409 | None:intergenic | 40.0% |
| AGATAATCCCAAGTGCTTAC+AGG | - | chr3_3:72196412-72196431 | Msa0470150:CDS | 40.0% | |
| GCTTACAGGAGTCCTAATAA+AGG | - | chr3_3:72196426-72196445 | Msa0470150:CDS | 40.0% | |
| TACAGGAGTCCTAATAAAGG+AGG | - | chr3_3:72196429-72196448 | Msa0470150:CDS | 40.0% | |
| TTGCTCTCTTACGATAGGTA+AGG | - | chr3_3:72196772-72196791 | Msa0470150:intron | 40.0% | |
| GTACAAGGATATTGTGTGCA+AGG | + | chr3_3:72196918-72196937 | None:intergenic | 40.0% | |
| ! | TCCTTGTACGGTTTTGCTTT+TGG | - | chr3_3:72196929-72196948 | Msa0470150:intron | 40.0% |
| ACCAAAAGCAAAACCGTACA+AGG | + | chr3_3:72196933-72196952 | None:intergenic | 40.0% | |
| AGAGGTCCTGCAATATAACA+AGG | + | chr3_3:72196993-72197012 | None:intergenic | 40.0% | |
| TTGTTATATTGCAGGACCTC+TGG | - | chr3_3:72196992-72197011 | Msa0470150:intron | 40.0% | |
| TATCTTCTTCGAGAAACCAG+AGG | + | chr3_3:72197011-72197030 | None:intergenic | 40.0% | |
| ! | GTATTGATACATTGTCTGGG+AGG | - | chr3_3:72197196-72197215 | Msa0470150:intron | 40.0% |
| ! | TTTTCCATAGCCTTTCGCTA+AGG | + | chr3_3:72197303-72197322 | None:intergenic | 40.0% |
| TTATGTGGCACAGATCCAAA+TGG | + | chr3_3:72197331-72197350 | None:intergenic | 40.0% | |
| !! | TGCTCTGGAATTGTTGTACA+TGG | + | chr3_3:72197420-72197439 | None:intergenic | 40.0% |
| TTCAAGCTGAAATCTTCAGC+AGG | + | chr3_3:72197444-72197463 | None:intergenic | 40.0% | |
| AGCTTGAACAAGATCTTGGA+TGG | - | chr3_3:72197456-72197475 | Msa0470150:intron | 40.0% | |
| !! | TTTTGTTGGCGAGCTTTGAT+TGG | + | chr3_3:72197585-72197604 | None:intergenic | 40.0% |
| !!! | ATTTTAGCTTTGGCAAGTGC+TGG | + | chr3_3:72197833-72197852 | None:intergenic | 40.0% |
| AGAAATAAAATCCAAGGGGG+TGG | + | chr3_3:72197960-72197979 | None:intergenic | 40.0% | |
| !!! | CAAACGTTTTTGGCGCGAAA+AGG | - | chr3_3:72192819-72192838 | Msa0470150:three_prime_UTR | 45.0% |
| GTTAGTTCCTATTGTGGTGG+TGG | - | chr3_3:72193574-72193593 | Msa0470150:CDS | 45.0% | |
| ! | GGTTCCTTTTGTGAATGGTG+GGG | - | chr3_3:72193711-72193730 | Msa0470150:intron | 45.0% |
| AACACCCCACCATTCACAAA+AGG | + | chr3_3:72193718-72193737 | None:intergenic | 45.0% | |
| ! | TGGGGTGTTTGTGACAATTG+AGG | - | chr3_3:72193729-72193748 | Msa0470150:intron | 45.0% |
| GAGGGACAATGTTACTCTGT+AGG | - | chr3_3:72193999-72194018 | Msa0470150:intron | 45.0% | |
| CCGATCATCCGGTCAAAAAA+CGG | + | chr3_3:72194132-72194151 | None:intergenic | 45.0% | |
| !!! | CCGTTTTTTGACCGGATGAT+CGG | - | chr3_3:72194129-72194148 | Msa0470150:intron | 45.0% |
| TGGGAAACAAACCGATCATC+CGG | + | chr3_3:72194143-72194162 | None:intergenic | 45.0% | |
| GCCGACATCCTTAATGCAAT+GGG | + | chr3_3:72194357-72194376 | None:intergenic | 45.0% | |
| AGCCGACATCCTTAATGCAA+TGG | + | chr3_3:72194358-72194377 | None:intergenic | 45.0% | |
| AAGCGCATCAAGGTCAAAAG+TGG | + | chr3_3:72194547-72194566 | None:intergenic | 45.0% | |
| GACCTTGATGCGCTTAACTT+AGG | - | chr3_3:72194552-72194571 | Msa0470150:CDS | 45.0% | |
| AGCCTAAGTTAAGCGCATCA+AGG | + | chr3_3:72194557-72194576 | None:intergenic | 45.0% | |
| ATAGGACTTCGATCTGCACA+TGG | + | chr3_3:72194845-72194864 | None:intergenic | 45.0% | |
| TGTGGCTATACGTTTCGATG+AGG | - | chr3_3:72194880-72194899 | Msa0470150:intron | 45.0% | |
| TGTGCATTTGAAGGACTGGA+TGG | + | chr3_3:72195007-72195026 | None:intergenic | 45.0% | |
| TGAACATCCACTACCCTTGT+CGG | + | chr3_3:72195181-72195200 | None:intergenic | 45.0% | |
| !! | AGGGTAGTGGATGTTCAAGA+TGG | - | chr3_3:72195184-72195203 | Msa0470150:CDS | 45.0% |
| !! | GTAGTGGATGTTCAAGATGG+TGG | - | chr3_3:72195187-72195206 | Msa0470150:intron | 45.0% |
| !! | TGAGAAGCATCTGGAGTTAG+TGG | + | chr3_3:72195457-72195476 | None:intergenic | 45.0% |
| CTAACTCCAGATGCTTCTCA+TGG | - | chr3_3:72195457-72195476 | Msa0470150:CDS | 45.0% | |
| TCCATGAACTTGTCCATCTG+AGG | + | chr3_3:72195488-72195507 | None:intergenic | 45.0% | |
| TCAGATGGACAAGTTCATGG+AGG | - | chr3_3:72195487-72195506 | Msa0470150:CDS | 45.0% | |
| TCTACCCATCAAATGGAGCA+AGG | - | chr3_3:72195669-72195688 | Msa0470150:intron | 45.0% | |
| CTGTCCTTGCTCCATTTGAT+GGG | + | chr3_3:72195676-72195695 | None:intergenic | 45.0% | |
| CATCAAATGGAGCAAGGACA+GGG | - | chr3_3:72195675-72195694 | Msa0470150:intron | 45.0% | |
| GTTGTAGGACACAAAAGCAG+TGG | + | chr3_3:72195832-72195851 | None:intergenic | 45.0% | |
| CGGGCGTAACTATATGTTGT+AGG | + | chr3_3:72195847-72195866 | None:intergenic | 45.0% | |
| CAACATACGAAGGAAGCGAA+AGG | - | chr3_3:72195938-72195957 | Msa0470150:intron | 45.0% | |
| CATGGGAACTGAAGAGCAAA+AGG | - | chr3_3:72195979-72195998 | Msa0470150:intron | 45.0% | |
| GGCTCATCAACAACGATTTC+AGG | + | chr3_3:72196303-72196322 | None:intergenic | 45.0% | |
| TGAGCCAATAACAGATGCAC+CGG | - | chr3_3:72196317-72196336 | Msa0470150:CDS | 45.0% | |
| ATCTCCGGTGCATCTGTTAT+TGG | + | chr3_3:72196324-72196343 | None:intergenic | 45.0% | |
| GAGACAATGCGTTCAATCTC+CGG | + | chr3_3:72196339-72196358 | None:intergenic | 45.0% | |
| TAGGACTCCTGTAAGCACTT+GGG | + | chr3_3:72196422-72196441 | None:intergenic | 45.0% | |
| TTAGGACTCCTGTAAGCACT+TGG | + | chr3_3:72196423-72196442 | None:intergenic | 45.0% | |
| GTCGCAACACCTCCTTTATT+AGG | + | chr3_3:72196441-72196460 | None:intergenic | 45.0% | |
| ACTCCTACTTCGGTTTCTGA+GGG | - | chr3_3:72196459-72196478 | Msa0470150:intron | 45.0% | |
| ATTCCCTCAGAAACCGAAGT+AGG | + | chr3_3:72196465-72196484 | None:intergenic | 45.0% | |
| ! | TACTTCGGTTTCTGAGGGAA+TGG | - | chr3_3:72196464-72196483 | Msa0470150:intron | 45.0% |
| GAGGGAATGGAGATACCATA+CGG | - | chr3_3:72196477-72196496 | Msa0470150:intron | 45.0% | |
| ATACATTGTCTGGGAGGACT+AGG | - | chr3_3:72197202-72197221 | Msa0470150:intron | 45.0% | |
| ATCACCTTAGCGAAAGGCTA+TGG | - | chr3_3:72197296-72197315 | Msa0470150:intron | 45.0% | |
| AAATCTTCAGCAGGTTGCTC+TGG | + | chr3_3:72197435-72197454 | None:intergenic | 45.0% | |
| GTACAACAAGAGGAGCCTTA+TGG | - | chr3_3:72197785-72197804 | Msa0470150:intron | 45.0% | |
| !! | AAAAAAACAATAAAAAAAAT+GGG | + | chr3_3:72192956-72192975 | None:intergenic | 5.0% |
| !! | AAAAAAAACAATAAAAAAAA+TGG | + | chr3_3:72192957-72192976 | None:intergenic | 5.0% |
| GCGAAAAGGACCACTCTCAA+CGG | - | chr3_3:72192833-72192852 | Msa0470150:three_prime_UTR | 50.0% | |
| AAGGACCACTCTCAACGGTT+TGG | - | chr3_3:72192838-72192857 | Msa0470150:three_prime_UTR | 50.0% | |
| GGGTACTTACGAACAGTGGA+GGG | + | chr3_3:72192921-72192940 | None:intergenic | 50.0% | |
| ! | AGGGTACTTACGAACAGTGG+AGG | + | chr3_3:72192922-72192941 | None:intergenic | 50.0% |
| !! | TTCCTATTGTGGTGGTGGTG+AGG | - | chr3_3:72193579-72193598 | Msa0470150:CDS | 50.0% |
| CTTAATGCAATGGGAACCCC+AGG | + | chr3_3:72194348-72194367 | None:intergenic | 50.0% | |
| CTGGGGTTCCCATTGCATTA+AGG | - | chr3_3:72194346-72194365 | Msa0470150:CDS | 50.0% | |
| !! | ATGTCGGCTCACCTACTCTT+AGG | - | chr3_3:72194369-72194388 | Msa0470150:CDS | 50.0% |
| AAGGTCAAAAGTGGCTGGCA+TGG | + | chr3_3:72194538-72194557 | None:intergenic | 50.0% | |
| GCATCAAGGTCAAAAGTGGC+TGG | + | chr3_3:72194543-72194562 | None:intergenic | 50.0% | |
| GGTATGAGGATGTTCACAGG+AGG | - | chr3_3:72194716-72194735 | Msa0470150:intron | 50.0% | |
| CGGTTGTGCATTTGAAGGAC+TGG | + | chr3_3:72195011-72195030 | None:intergenic | 50.0% | |
| CTTGCATCAGAATCTGGTGG+CGG | + | chr3_3:72195031-72195050 | None:intergenic | 50.0% | |
| GGTCTTGCATCAGAATCTGG+TGG | + | chr3_3:72195034-72195053 | None:intergenic | 50.0% | |
| TACCCTTGTCGGTGGAGATT+GGG | + | chr3_3:72195170-72195189 | None:intergenic | 50.0% | |
| ! | TGGTCTAGCTGGTTGAGTTG+GGG | + | chr3_3:72195437-72195456 | None:intergenic | 50.0% |
| GTGGTCTAGCTGGTTGAGTT+GGG | + | chr3_3:72195438-72195457 | None:intergenic | 50.0% | |
| AGTGGTCTAGCTGGTTGAGT+TGG | + | chr3_3:72195439-72195458 | None:intergenic | 50.0% | |
| ! | TCTGGAGTTAGTGGTCTAGC+TGG | + | chr3_3:72195448-72195467 | None:intergenic | 50.0% |
| ACTCCAGATGCTTCTCATGG+TGG | - | chr3_3:72195460-72195479 | Msa0470150:CDS | 50.0% | |
| GCCTCAGATGGACAAGTTCA+TGG | - | chr3_3:72195484-72195503 | Msa0470150:CDS | 50.0% | |
| GATGCTTCCTACCCCTCAAA+TGG | - | chr3_3:72195632-72195651 | Msa0470150:intron | 50.0% | |
| TCTGTCCCTGCTCCATTTGA+GGG | + | chr3_3:72195647-72195666 | None:intergenic | 50.0% | |
| CCTGTCCTTGCTCCATTTGA+TGG | + | chr3_3:72195677-72195696 | None:intergenic | 50.0% | |
| CCATCAAATGGAGCAAGGAC+AGG | - | chr3_3:72195674-72195693 | Msa0470150:intron | 50.0% | |
| ACAGGGTCCTGTTCCTCAAA+TGG | - | chr3_3:72195692-72195711 | Msa0470150:intron | 50.0% | |
| CCTTGCTCCATTTGAGGAAC+AGG | + | chr3_3:72195702-72195721 | None:intergenic | 50.0% | |
| CCTGTTCCTCAAATGGAGCA+AGG | - | chr3_3:72195699-72195718 | Msa0470150:intron | 50.0% | |
| TCCTCAAATGGAGCAAGGAC+AGG | - | chr3_3:72195704-72195723 | Msa0470150:intron | 50.0% | |
| CCTCAAATGGAGCAAGGACA+GGG | - | chr3_3:72195705-72195724 | Msa0470150:intron | 50.0% | |
| GTGAGAGGCCTCAAAGAGTA+AGG | - | chr3_3:72195739-72195758 | Msa0470150:CDS | 50.0% | |
| CGAAAGGACGTCACTGCTTT+GGG | - | chr3_3:72195954-72195973 | Msa0470150:intron | 50.0% | |
| CATCTCCGAGGAAGATCATC+CGG | - | chr3_3:72196182-72196201 | Msa0470150:intron | 50.0% | |
| GGCTCGTCAACAGCAATTTC+AGG | + | chr3_3:72196267-72196286 | None:intergenic | 50.0% | |
| !! | GGCAGGTTGATCATCAGCAA+CGG | + | chr3_3:72196361-72196380 | None:intergenic | 50.0% |
| !! | CTTTGAGTTGGGATAGTGGC+AGG | + | chr3_3:72196378-72196397 | None:intergenic | 50.0% |
| ! | AGGTGTTGCGACTCCTACTT+CGG | - | chr3_3:72196449-72196468 | Msa0470150:intron | 50.0% |
| GACTCCTACTTCGGTTTCTG+AGG | - | chr3_3:72196458-72196477 | Msa0470150:intron | 50.0% | |
| GTTTCTGATGCATGAGCTCG+AGG | + | chr3_3:72196513-72196532 | None:intergenic | 50.0% | |
| CGAGCTCATGCATCAGAAAC+TGG | - | chr3_3:72196513-72196532 | Msa0470150:intron | 50.0% | |
| GTGTGCAAGGTAGAACATGC+AGG | + | chr3_3:72196905-72196924 | None:intergenic | 50.0% | |
| ! | TAGAACATACTGGCTGTGGC+TGG | + | chr3_3:72197039-72197058 | None:intergenic | 50.0% |
| TTAGAGGTTAACCACCCCCT+TGG | - | chr3_3:72197946-72197965 | Msa0470150:CDS | 50.0% | |
| GCGATCCAAACCGTTGAGAG+TGG | + | chr3_3:72192846-72192865 | None:intergenic | 55.0% | |
| AGCCTCACCACCACCACAAT+AGG | + | chr3_3:72193584-72193603 | None:intergenic | 55.0% | |
| ! | TGGGTTTTCGGTCACTTGCG+AGG | - | chr3_3:72193980-72193999 | Msa0470150:intron | 55.0% |
| ! | GGGTTTTCGGTCACTTGCGA+GGG | - | chr3_3:72193981-72194000 | Msa0470150:intron | 55.0% |
| ACACTCTACCTGAGGATGCG+AGG | - | chr3_3:72194490-72194509 | Msa0470150:CDS | 55.0% | |
| ! | GGTGGCGGTTGTGCATTTGA+AGG | + | chr3_3:72195016-72195035 | None:intergenic | 55.0% |
| TTCCCCAATCTCCACCGACA+AGG | - | chr3_3:72195164-72195183 | Msa0470150:CDS | 55.0% | |
| TCCCCAATCTCCACCGACAA+GGG | - | chr3_3:72195165-72195184 | Msa0470150:CDS | 55.0% | |
| ACCCTTGTCGGTGGAGATTG+GGG | + | chr3_3:72195169-72195188 | None:intergenic | 55.0% | |
| CTACCCTTGTCGGTGGAGAT+TGG | + | chr3_3:72195171-72195190 | None:intergenic | 55.0% | |
| ATCTCCACCGACAAGGGTAG+TGG | - | chr3_3:72195171-72195190 | Msa0470150:CDS | 55.0% | |
| ACATCCACTACCCTTGTCGG+TGG | + | chr3_3:72195178-72195197 | None:intergenic | 55.0% | |
| GGGGTTTCAGCATGGATCTC+AGG | + | chr3_3:72195415-72195434 | None:intergenic | 55.0% | |
| !! | TCTAGCTGGTTGAGTTGGGG+GGG | + | chr3_3:72195434-72195453 | None:intergenic | 55.0% |
| !! | GTCTAGCTGGTTGAGTTGGG+GGG | + | chr3_3:72195435-72195454 | None:intergenic | 55.0% |
| !! | GGTCTAGCTGGTTGAGTTGG+GGG | + | chr3_3:72195436-72195455 | None:intergenic | 55.0% |
| TCCTACCCCTCAAATGGAGC+AGG | - | chr3_3:72195638-72195657 | Msa0470150:intron | 55.0% | |
| CCTACCCCTCAAATGGAGCA+GGG | - | chr3_3:72195639-72195658 | Msa0470150:intron | 55.0% | |
| CTGTCCCTGCTCCATTTGAG+GGG | + | chr3_3:72195646-72195665 | None:intergenic | 55.0% | |
| CTCTGTCCCTGCTCCATTTG+AGG | + | chr3_3:72195648-72195667 | None:intergenic | 55.0% | |
| CCCTGTCCTTGCTCCATTTG+AGG | + | chr3_3:72195678-72195697 | None:intergenic | 55.0% | |
| AATGGAGCAAGGACAGGGTC+AGG | - | chr3_3:72195680-72195699 | Msa0470150:intron | 55.0% | |
| CAAGGACAGGGTCAGGATCA+GGG | - | chr3_3:72195717-72195736 | Msa0470150:intron | 55.0% | |
| GCGAAAGGACGTCACTGCTT+TGG | - | chr3_3:72195953-72195972 | Msa0470150:intron | 55.0% | |
| ACCTCACTTGGTCATCTCCG+AGG | - | chr3_3:72196170-72196189 | Msa0470150:intron | 55.0% | |
| TCCTCGGAGATGACCAAGTG+AGG | + | chr3_3:72196174-72196193 | None:intergenic | 55.0% | |
| CGAGGTGATGTTGCACCGTA+TGG | + | chr3_3:72196495-72196514 | None:intergenic | 55.0% | |
| TGAGGATGCGAGGCAAGCAC+CGG | - | chr3_3:72194500-72194519 | Msa0470150:CDS | 60.0% | |
| GAGGGATCGCGAAGAGCTTC+CGG | + | chr3_3:72195310-72195329 | None:intergenic | 60.0% | |
| GAGTTGGGGGGGTTTCAGCA+TGG | + | chr3_3:72195423-72195442 | None:intergenic | 60.0% | |
| !! | GCGCCACCATGAGAAGCATC+TGG | + | chr3_3:72195466-72195485 | None:intergenic | 60.0% |
| ! | TCTCATGGTGGCGCCTCAGA+TGG | - | chr3_3:72195472-72195491 | Msa0470150:CDS | 60.0% |
| CCCTGCTCCATTTGAGGGGT+AGG | + | chr3_3:72195642-72195661 | None:intergenic | 60.0% | |
| GCAAGGACAGGGTCAGGATC+AGG | - | chr3_3:72195716-72195735 | Msa0470150:intron | 60.0% | |
| AGGGTCAGGATCAGGGTGAG+AGG | - | chr3_3:72195724-72195743 | Msa0470150:intron | 60.0% | |
| ! | ACGTCACTGCTTTGGGCGCA+TGG | - | chr3_3:72195961-72195980 | Msa0470150:intron | 60.0% |
| ! | CGTCACTGCTTTGGGCGCAT+GGG | - | chr3_3:72195962-72195981 | Msa0470150:intron | 60.0% |
| GGTGCTTGCCTCGCATCCTC+AGG | + | chr3_3:72194501-72194520 | None:intergenic | 65.0% | |
| GGATCGCGAAGAGCTTCCGG+TGG | + | chr3_3:72195307-72195326 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 72192725 | 72198065 | 72192725 | ID=Msa0470150;Name=Msa0470150 |
| chr3_3 | mRNA | 72192725 | 72198065 | 72192725 | ID=Msa0470150-mRNA-1;Parent=Msa0470150;Name=Msa0470150-mRNA-1;_AED=0.07;_eAED=0.07;_QI=82|1|0.92|1|1|1|13|209|694 |
| chr3_3 | exon | 72192725 | 72193032 | 72192725 | ID=Msa0470150-mRNA-1:exon:17954;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72193269 | 72193404 | 72193269 | ID=Msa0470150-mRNA-1:exon:17953;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72193567 | 72193615 | 72193567 | ID=Msa0470150-mRNA-1:exon:17952;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72193742 | 72193784 | 72193742 | ID=Msa0470150-mRNA-1:exon:17951;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72194170 | 72194672 | 72194170 | ID=Msa0470150-mRNA-1:exon:17950;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72194752 | 72194882 | 72194752 | ID=Msa0470150-mRNA-1:exon:17949;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72194985 | 72195204 | 72194985 | ID=Msa0470150-mRNA-1:exon:17948;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72195282 | 72195631 | 72195282 | ID=Msa0470150-mRNA-1:exon:17947;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72195725 | 72195792 | 72195725 | ID=Msa0470150-mRNA-1:exon:17946;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72195889 | 72195938 | 72195889 | ID=Msa0470150-mRNA-1:exon:17945;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72196027 | 72196073 | 72196027 | ID=Msa0470150-mRNA-1:exon:17944;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72196195 | 72196459 | 72196195 | ID=Msa0470150-mRNA-1:exon:17943;Parent=Msa0470150-mRNA-1 |
| chr3_3 | exon | 72197860 | 72198065 | 72197860 | ID=Msa0470150-mRNA-1:exon:17942;Parent=Msa0470150-mRNA-1 |
| chr3_3 | five_prime_UTR | 72197984 | 72198065 | 72197984 | ID=Msa0470150-mRNA-1:five_prime_utr;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72197860 | 72197983 | 72197860 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72196195 | 72196459 | 72196195 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72196027 | 72196073 | 72196027 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72195889 | 72195938 | 72195889 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72195725 | 72195792 | 72195725 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72195282 | 72195631 | 72195282 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72194985 | 72195204 | 72194985 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72194752 | 72194882 | 72194752 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72194170 | 72194672 | 72194170 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72193742 | 72193784 | 72193742 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72193567 | 72193615 | 72193567 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72193269 | 72193404 | 72193269 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | CDS | 72192934 | 72193032 | 72192934 | ID=Msa0470150-mRNA-1:cds;Parent=Msa0470150-mRNA-1 |
| chr3_3 | three_prime_UTR | 72192725 | 72192933 | 72192725 | ID=Msa0470150-mRNA-1:three_prime_utr;Parent=Msa0470150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
