AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0204970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0204970 MtrunA17_Chr2g0295841 98.571 1330 19 0 1 1330 1 1330 0.0 2695
Msa0204970 MtrunA17_Chr7g0270721 84.667 150 23 0 1171 1320 1 150 6.23e-68 225
Msa0204970 MtrunA17_Chr7g0270751 77.165 127 29 0 378 504 2 128 7.13e-54 184
Msa0204970 MtrunA17_Chr6g0468091 82.407 108 16 2 1 108 1 105 7.10e-49 169
Msa0204970 MtrunA17_Chr4g0067781 82.407 108 16 2 1 108 1 105 1.42e-48 168
Msa0204970 MtrunA17_Chr7g0270741 96.078 51 2 0 877 927 1 51 1.18e-26 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0204970 AT4G15890.1 55.498 1355 537 22 1 1330 1 1314 0.0 1432
Msa0204970 AT4G15890.2 55.203 1355 537 23 1 1330 1 1310 0.0 1419

Find 316 sgRNAs with CRISPR-Local

Find 517 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGAGTAGCTTATTTAATTT+TGG 0.113880 2_1:+30955761 None:intergenic
TCAACTTTCTGTACAGAATT+TGG 0.159430 2_1:+30959238 None:intergenic
CCTTTACTTGGCCCACTTCT+AGG 0.191201 2_1:+30955932 None:intergenic
TGTACAGAATTTGGCGAATT+AGG 0.194372 2_1:+30959247 None:intergenic
GTCAAGGGAAAACCAATTTA+AGG 0.197230 2_1:-30958724 Msa0204970:CDS
GATTGATTTGCAACTGATTT+TGG 0.198404 2_1:+30953819 None:intergenic
ACAAGTTCTCACATTCTTCT+TGG 0.241403 2_1:+30957560 None:intergenic
AACCGCCAAAAGCCTTAAAT+TGG 0.244502 2_1:+30958712 None:intergenic
TCCGAGGTATTTGGCAAATA+AGG 0.245567 2_1:-30958858 Msa0204970:CDS
TTGAAAGAGTTTATGGGTTT+TGG 0.253401 2_1:-30958476 Msa0204970:CDS
AACTGATCCTGCTGCTGATT+TGG 0.255991 2_1:-30956978 Msa0204970:CDS
AATTCCCAGTCCACTGCTTT+TGG 0.261434 2_1:+30957178 None:intergenic
TGGACTCACGATGTCCATTA+TGG 0.262095 2_1:+30954644 None:intergenic
ATCTGCTGAGCGTTGTTATT+AGG 0.268108 2_1:+30959328 None:intergenic
GAAAACCAATTTAAGGCTTT+TGG 0.282252 2_1:-30958717 Msa0204970:CDS
ACCTATGAGGGGACTGTTCT+TGG 0.287289 2_1:+30954004 None:intergenic
CCTGACTTCCGACCTTTACT+TGG 0.287942 2_1:+30955920 None:intergenic
GGCACTTCAGAATATAATTA+AGG 0.300402 2_1:-30957299 Msa0204970:CDS
TCGACTTTGGCGCAGGTTGT+TGG 0.302857 2_1:-30958533 Msa0204970:CDS
CTGTACAGAAAGTTGATGTT+AGG 0.308042 2_1:-30959231 Msa0204970:CDS
TCTGCTGAGCGTTGTTATTA+GGG 0.313392 2_1:+30959329 None:intergenic
ATTACAGCTATTTATACAAT+TGG 0.316579 2_1:-30955869 Msa0204970:CDS
AGGAGTGAAGAGAGTGAAAA+CGG 0.322214 2_1:+30959411 None:intergenic
GGGAATGGTTGAGGAGGGTT+TGG 0.322634 2_1:+30959575 None:intergenic
GGTTGTTAGGGTTATGGAAG+TGG 0.322925 2_1:-30958786 Msa0204970:CDS
ACCGGAGCATGGGGAGGTTT+CGG 0.323006 2_1:-30959017 Msa0204970:CDS
AATGGAGGTTGTTAGGGTTA+TGG 0.325419 2_1:-30958792 Msa0204970:CDS
TGAGAAATTAGTTAATGTTA+TGG 0.327011 2_1:-30959191 Msa0204970:CDS
CATTGTTGAAGGATCCTTTA+GGG 0.329085 2_1:-30958667 Msa0204970:CDS
ACATTGTTGAAGGATCCTTT+AGG 0.330598 2_1:-30958668 Msa0204970:CDS
CATAGAGTTGAAACGTCTAT+TGG 0.330825 2_1:-30954030 Msa0204970:CDS
TGAGCGTTGTTATTAGGGTT+TGG 0.333002 2_1:+30959334 None:intergenic
GAGCGTTGTTATTAGGGTTT+GGG 0.334495 2_1:+30959335 None:intergenic
CGACTTTGGCGCAGGTTGTT+GGG 0.334679 2_1:-30958532 Msa0204970:CDS
AATGCATTTATTTGTACAAC+TGG 0.343052 2_1:+30957097 None:intergenic
AAGAAGCAATAGTCTTGAAA+TGG 0.346434 2_1:-30956048 Msa0204970:CDS
GGGAATTTCTTCATCATCAT+TGG 0.352263 2_1:-30957162 Msa0204970:CDS
TTCTATTATTTGAGAAGCTC+TGG 0.361263 2_1:+30956009 None:intergenic
GAGAAATTAGTTAATGTTAT+GGG 0.362090 2_1:-30959190 Msa0204970:CDS
TTCTCTCATGGAATGCCTTC+GGG 0.365074 2_1:-30953982 Msa0204970:CDS
CCCCATTGCAAATCTCTCTA+AGG 0.370517 2_1:+30957395 None:intergenic
ACCTGATGTTTCTAAGAATC+TGG 0.372734 2_1:-30953796 Msa0204970:CDS
GAGAGAAGAGAGGGATTGTT+CGG 0.373389 2_1:+30959597 None:intergenic
GGAACGGAGGAAGGAGAGAA+AGG 0.375629 2_1:+30959384 None:intergenic
CCACTCGGTTGTTACCATTT+CGG 0.376203 2_1:+30957627 None:intergenic
CTAAGGGTTGGGAATGGTTG+AGG 0.376575 2_1:+30959566 None:intergenic
GGCGTCGTAGAGTGGGTCTA+AGG 0.378436 2_1:+30959549 None:intergenic
GTTCTCTCATGGAATGCCTT+CGG 0.389730 2_1:-30953983 Msa0204970:CDS
CTTGTTTCAAGAACTTGTTT+TGG 0.390953 2_1:-30957542 Msa0204970:CDS
GATTGTTCGGAGAGTGGTTG+TGG 0.394788 2_1:+30959610 None:intergenic
CGGTGGCGATTGGAGGGATT+AGG 0.395555 2_1:+30959512 None:intergenic
GCCTGAAAAGAGCTGTCATT+TGG 0.397728 2_1:+30953449 None:intergenic
ATTGCTATCGAGACTGTTGC+AGG 0.399185 2_1:-30955133 Msa0204970:intron
CAATGGGGAGGTGAGTCCTT+GGG 0.404868 2_1:-30957380 Msa0204970:CDS
GGTACACTGCTCTTATTGAT+TGG 0.405150 2_1:-30955452 Msa0204970:intron
TGTTGTAATGCCGAAGTCTC+AGG 0.408410 2_1:-30958957 Msa0204970:CDS
GATGCGGGTGTGGGAGGAAA+GGG 0.408673 2_1:-30958443 Msa0204970:CDS
AGCTGAGCCAAGGGCGTTGG+CGG 0.415111 2_1:-30958825 Msa0204970:CDS
CTCAATATTGAAGATGCAAC+TGG 0.416969 2_1:-30954365 Msa0204970:CDS
GTGATGATAGTGTGCAATAA+TGG 0.417227 2_1:+30955800 None:intergenic
AATGACTGCCGTGCCCATAA+TGG 0.422052 2_1:-30954658 Msa0204970:CDS
GCGAGGAGAGAGTGAGGTGG+TGG 0.422409 2_1:+30959475 None:intergenic
GCCAGATTCTTAGAAACATC+AGG 0.424483 2_1:+30953795 None:intergenic
GGAGTGAAGAGAGTGAAAAC+GGG 0.424602 2_1:+30959412 None:intergenic
GGCTCATAACTTGCTCAAAC+GGG 0.425446 2_1:-30956957 Msa0204970:CDS
TGAGGTTCAGTATGGTAGAT+TGG 0.427676 2_1:-30959077 Msa0204970:CDS
TAGAATTTCTGCACATAACT+TGG 0.428426 2_1:+30954409 None:intergenic
GAGAGGGATTGTTCGGAGAG+TGG 0.428653 2_1:+30959604 None:intergenic
ATAACAACGCTCAGCAGATT+CGG 0.429751 2_1:-30959324 Msa0204970:CDS
TTGATGAATCAGAAAAGATT+AGG 0.430112 2_1:-30954863 Msa0204970:CDS
AAGGAGATACAGAATTCCTT+GGG 0.430278 2_1:+30957414 None:intergenic
GCAATGGGGAGGTGAGTCCT+TGG 0.433317 2_1:-30957381 Msa0204970:CDS
TCTTGTTGTAGAGAGGTTGC+AGG 0.439033 2_1:+30955737 None:intergenic
TTAAGGTGTCCGAGTCCATC+TGG 0.441441 2_1:-30957282 Msa0204970:CDS
AATTTCCTTTAGCAAAGAAC+GGG 0.441442 2_1:+30953668 None:intergenic
TAAGAGACACCGTGTGATCT+TGG 0.442265 2_1:+30955191 None:intergenic
AGGGAATCAATGAGATGCTT+AGG 0.443031 2_1:-30958424 Msa0204970:CDS
CAGCTGCAGTTCTAGATATT+CGG 0.443480 2_1:+30957518 None:intergenic
TTACAGCTATTTATACAATT+GGG 0.444781 2_1:-30955868 Msa0204970:CDS
GCCCTTGGCTCAGCTTTATC+CGG 0.445049 2_1:+30958833 None:intergenic
TTCTTCCAAAAGCAGTGGAC+TGG 0.446024 2_1:-30957183 Msa0204970:CDS
TGATGGAAATGATGCGGGTG+TGG 0.446351 2_1:-30958453 Msa0204970:CDS
AACAGCCCGTTCTTTGCTAA+AGG 0.446610 2_1:-30953673 Msa0204970:CDS
GTTGTTAGGGTTATGGAAGT+GGG 0.446778 2_1:-30958785 Msa0204970:CDS
AAAGAAACCAAGCGCCTTGT+GGG 0.446929 2_1:+30957224 None:intergenic
GATGTTAGTGCTACGATTCG+AGG 0.446972 2_1:-30958566 Msa0204970:CDS
TGATGCGGGTGTGGGAGGAA+AGG 0.447147 2_1:-30958444 Msa0204970:CDS
GTTCAGTATGGTAGATTGGT+TGG 0.450585 2_1:-30959073 Msa0204970:CDS
CCAAGTAAAGGTCGGAAGTC+AGG 0.453017 2_1:-30955920 Msa0204970:CDS
GAATGAGATTGATGACATAT+TGG 0.453212 2_1:-30953940 Msa0204970:CDS
TGTACAGAAAGTTGATGTTA+GGG 0.456506 2_1:-30959230 Msa0204970:CDS
TGTACAAATAAATGCATTTG+AGG 0.457062 2_1:-30957092 Msa0204970:CDS
GCAACGGAGGGAACGGAGGA+AGG 0.459005 2_1:+30959375 None:intergenic
AGGGCGAGCTTTGTCGACTT+TGG 0.459162 2_1:-30958546 Msa0204970:CDS
CAGAACATTCTCAGCCGAAA+TGG 0.459735 2_1:-30957641 Msa0204970:CDS
TTTGGTGATGGAAATGATGC+GGG 0.460407 2_1:-30958458 Msa0204970:CDS
AGCTTTGTCGACTTTGGCGC+AGG 0.461963 2_1:-30958540 Msa0204970:CDS
CTATATTCCTCTGTTTGTAC+AGG 0.464460 2_1:-30955639 Msa0204970:intron
CTTGCTATGGTTCAGCCAGA+TGG 0.465632 2_1:+30957267 None:intergenic
GATGGAAATGATGCGGGTGT+GGG 0.465661 2_1:-30958452 Msa0204970:CDS
AATCAACGATTTCAAACTCT+CGG 0.466014 2_1:+30959144 None:intergenic
TTTCGGTGTGGTGGGTTTCG+CGG 0.466538 2_1:+30959635 None:intergenic
ACCAGTGAAAGACTTGACTT+TGG 0.467457 2_1:+30953602 None:intergenic
TGTTTCTCTACTAAAGCAAA+TGG 0.467960 2_1:-30954459 Msa0204970:CDS
TCCTTAGAGAGATTTGCAAT+GGG 0.468873 2_1:-30957396 Msa0204970:CDS
GACTTCGGCATTACAACAAA+AGG 0.468932 2_1:+30958962 None:intergenic
TGGCTCATAACTTGCTCAAA+CGG 0.469215 2_1:-30956958 Msa0204970:CDS
GCTTTCCGTTCGTGATTCGT+TGG 0.470396 2_1:+30954624 None:intergenic
GAATCTTGTGACATTGTTGA+AGG 0.471468 2_1:-30958678 Msa0204970:CDS
GGACTCTAGAGGCACCTAGA+AGG 0.472632 2_1:+30953470 None:intergenic
TGAGCCAAGGGCGTTGGCGG+TGG 0.473090 2_1:-30958822 Msa0204970:CDS
AGGAGATTCTTGTTGTAGAG+AGG 0.473409 2_1:+30955730 None:intergenic
TCCATTGCGGTGGCGATTGG+AGG 0.474305 2_1:+30959505 None:intergenic
ACGTTTCAACTCTATGAAGA+TGG 0.474677 2_1:+30954037 None:intergenic
GTAGAGTGGGTCTAAGGGTT+GGG 0.474958 2_1:+30959555 None:intergenic
GGAAGAAGGGAATGTGGCGT+GGG 0.475967 2_1:-30958627 Msa0204970:CDS
TTGCACACTATCATCACCTC+TGG 0.476824 2_1:-30955794 Msa0204970:CDS
TCCGAAACCTCCCCATGCTC+CGG 0.477596 2_1:+30959016 None:intergenic
GAAAGGTTTAGACAACGAAA+TGG 0.478113 2_1:-30957449 Msa0204970:CDS
TAGAATGCAATAATGTTGCC+TGG 0.478158 2_1:-30957057 Msa0204970:CDS
CCAGTGAAAGACTTGACTTT+GGG 0.478615 2_1:+30953603 None:intergenic
TAAGGAGATACAGAATTCCT+TGG 0.479653 2_1:+30957413 None:intergenic
GAGGGTTTGGAGAGAAGAGA+GGG 0.479717 2_1:+30959588 None:intergenic
TGGGTTTAATTCATCTTGAT+CGG 0.480437 2_1:-30959171 Msa0204970:CDS
GTTGAATCACAAAATTGTTA+CGG 0.483244 2_1:-30957320 Msa0204970:CDS
GAGAAGGTGTGTGGATGAGA+AGG 0.484222 2_1:-30958402 Msa0204970:CDS
GGACTCACGATGTCCATTAT+GGG 0.484381 2_1:+30954645 None:intergenic
ACTAACTTGACTGCTCTACT+TGG 0.484657 2_1:-30958347 Msa0204970:CDS
GGGTTGGGAATGGTTGAGGA+GGG 0.488038 2_1:+30959570 None:intergenic
TCTTCCAAAAGCAGTGGACT+GGG 0.490628 2_1:-30957182 Msa0204970:CDS
AAACTCCTCACCTGAGACTT+CGG 0.490716 2_1:+30958947 None:intergenic
AAATGGATCTTCAACTAGAA+AGG 0.491312 2_1:-30954105 Msa0204970:CDS
AGGGGTGAATTCGACGGATG+AGG 0.491789 2_1:-30958648 Msa0204970:CDS
AACTGGACAGTCTGTTCTAC+AGG 0.493929 2_1:-30954348 Msa0204970:intron
ACGAATGCTAAGAAGTGAAT+CGG 0.494372 2_1:+30958277 None:intergenic
GGCAAACTTTGCCTTGCTGA+TGG 0.495244 2_1:-30955677 Msa0204970:CDS
CCCAAAGTCAAGTCTTTCAC+TGG 0.496013 2_1:-30953603 Msa0204970:CDS
AAATCCACCGCCAACGCCCT+TGG 0.497749 2_1:+30958818 None:intergenic
TTGGAGAGAGGAGGAAAGAG+AGG 0.498035 2_1:+30959440 None:intergenic
ATTCATCAACAAGTGACAAA+AGG 0.500825 2_1:+30954877 None:intergenic
GGACTGCCCCACAAGGCGCT+TGG 0.500971 2_1:-30957231 Msa0204970:CDS
TGCGCTGGTGAAGCGTTGTT+CGG 0.501383 2_1:-30958588 Msa0204970:CDS
GGAGATTTCTGTTACGATGC+GGG 0.501515 2_1:+30959663 None:intergenic
GAGTCCATTGCGGTGGCGAT+TGG 0.501794 2_1:+30959502 None:intergenic
AACTAGAAAGGCTATAACTC+AGG 0.502839 2_1:-30954093 Msa0204970:CDS
AGAAGCAATAGTCTTGAAAT+GGG 0.503507 2_1:-30956047 Msa0204970:CDS
CATCTCCGGTGGCGCTACTC+CGG 0.504552 2_1:+30959702 None:intergenic
CGGCAGACTTAGAAGAAGAA+GGG 0.504866 2_1:-30954133 Msa0204970:CDS
GAGAAGCTCTGGATAGAACT+TGG 0.504985 2_1:+30956020 None:intergenic
GTGGTGGGTTTCGCGGAGGT+CGG 0.507582 2_1:+30959642 None:intergenic
AGGAAGAAGGGAATGTGGCG+TGG 0.508286 2_1:-30958628 Msa0204970:CDS
CGGAGTAGCGCCACCGGAGA+TGG 0.508591 2_1:-30959701 Msa0204970:exon
AGCAGATTCGGAAGCGGAGA+CGG 0.508647 2_1:-30959312 Msa0204970:CDS
AATTCGACGGATGAGGAAGA+AGG 0.510292 2_1:-30958641 Msa0204970:CDS
CTCCTTAGAGAGATTTGCAA+TGG 0.511786 2_1:-30957397 Msa0204970:CDS
GGAGGGTTTGGAGAGAAGAG+AGG 0.512339 2_1:+30959587 None:intergenic
TCGGCAGACTTAGAAGAAGA+AGG 0.512477 2_1:-30954134 Msa0204970:CDS
GAATACTCGGTCACTAGCCC+AGG 0.514327 2_1:+30957039 None:intergenic
CATTGTTGCTTAATGCTGAT+CGG 0.514844 2_1:-30953398 Msa0204970:three_prime_UTR
ACCAAGAACAGTCCCCTCAT+AGG 0.515821 2_1:-30954005 Msa0204970:CDS
TATTCAAGGGTGGCTGACCA+TGG 0.516492 2_1:-30955699 Msa0204970:CDS
TATAACTCAGGCAGTCAAGA+AGG 0.516990 2_1:-30954081 Msa0204970:CDS
CATTAGAGATTGTTTGCAAG+AGG 0.517525 2_1:+30957017 None:intergenic
AAACTATTATATGCTAAAAG+AGG 0.518019 2_1:+30954703 None:intergenic
GATTAGGTGGGAAGGTGAAA+CGG 0.519372 2_1:+30959528 None:intergenic
CGTAGAGTGGGTCTAAGGGT+TGG 0.519519 2_1:+30959554 None:intergenic
GTACAAATAAATGCATTTGA+GGG 0.520142 2_1:-30957091 Msa0204970:CDS
ATCTAGAGGTGATAAGCGCT+TGG 0.520855 2_1:-30953571 Msa0204970:CDS
AGGAAGGAGAGAAAGGAGAG+AGG 0.521205 2_1:+30959391 None:intergenic
ATCAACGATTTCAAACTCTC+GGG 0.522470 2_1:+30959145 None:intergenic
CCTAGAAGTGGGCCAAGTAA+AGG 0.525097 2_1:-30955932 Msa0204970:CDS
AGTGTTTCGTCGTCCATCTC+CGG 0.525333 2_1:+30959688 None:intergenic
TGAAAGCGCAACGGAGGGAA+CGG 0.526226 2_1:+30959368 None:intergenic
ATGCCTTCGGGTCCTTCTCA+AGG 0.526670 2_1:-30953970 Msa0204970:CDS
AAATCAGCAGCAGGATCAGT+TGG 0.526688 2_1:+30956980 None:intergenic
CCCTCCAATCGCCACCGCAA+TGG 0.528014 2_1:-30959506 Msa0204970:CDS
CGCCGGATAAAGCTGAGCCA+AGG 0.528961 2_1:-30958835 Msa0204970:CDS
TTCTGCACATAACTTGGCAA+AGG 0.530806 2_1:+30954415 None:intergenic
AACTTGACTGCTCTACTTGG+AGG 0.530826 2_1:-30958344 Msa0204970:CDS
GTGGGTCTAAGGGTTGGGAA+TGG 0.532512 2_1:+30959560 None:intergenic
GCACGACCCTTGTGAACGCA+TGG 0.532804 2_1:+30953314 None:intergenic
ACAATTGCAGGAGCTTGAAA+AGG 0.533535 2_1:-30955532 Msa0204970:intron
AAAGGTTGCTAGAAGATGCT+CGG 0.535279 2_1:+30954433 None:intergenic
TTGTGTAATGAGGTTCAGTA+TGG 0.536718 2_1:-30959085 Msa0204970:CDS
AGCAATTCAACGATGCATGC+TGG 0.537178 2_1:+30953273 None:intergenic
TCCGTCGAATTCACCCCTAA+AGG 0.541701 2_1:+30958653 None:intergenic
TAAAGCTGAGCCAAGGGCGT+TGG 0.542252 2_1:-30958828 Msa0204970:CDS
GGAAATGATGCGGGTGTGGG+AGG 0.542646 2_1:-30958449 Msa0204970:CDS
ATGGTTCAGCCAGATGGACT+CGG 0.544136 2_1:+30957273 None:intergenic
ATTCCATGAGAGAACCTATG+AGG 0.546255 2_1:+30953991 None:intergenic
TGGCGATTGGAGGGATTAGG+TGG 0.547407 2_1:+30959515 None:intergenic
AAGGTTGCTAGAAGATGCTC+GGG 0.547680 2_1:+30954434 None:intergenic
ACAAACACATGAACAAAATG+AGG 0.547734 2_1:-30953760 Msa0204970:CDS
GATTTGGTGTTTGGATGCGC+TGG 0.548777 2_1:-30958603 Msa0204970:CDS
GAAGAAGGGAATGTGGCGTG+GGG 0.550877 2_1:-30958626 Msa0204970:CDS
TAATTTCCTTTAGCAAAGAA+CGG 0.552386 2_1:+30953667 None:intergenic
GGTGAAACGGCGTCGTAGAG+TGG 0.556633 2_1:+30959541 None:intergenic
CGTTTCAACTCTATGAAGAT+GGG 0.559362 2_1:+30954038 None:intergenic
GCAAACTTTGCCTTGCTGAT+GGG 0.560882 2_1:-30955676 Msa0204970:CDS
CAAAAGTACCTCGGAAAGAG+AGG 0.561434 2_1:+30958241 None:intergenic
GTGAAACGGCGTCGTAGAGT+GGG 0.563314 2_1:+30959542 None:intergenic
TTATGAGCCAAATCAGCAGC+AGG 0.563977 2_1:+30956971 None:intergenic
CCATTGCGGTGGCGATTGGA+GGG 0.568044 2_1:+30959506 None:intergenic
AAATCTCGTTCTGCACAGAC+CGG 0.568248 2_1:-30959721 Msa0204970:five_prime_UTR
TTCAATATTGAGCATACCAT+CGG 0.569235 2_1:+30954376 None:intergenic
TGCCTTCTCACAAGTTCACA+AGG 0.569805 2_1:+30955165 None:intergenic
AATATATCCATGCGTTCACA+AGG 0.570156 2_1:-30953321 Msa0204970:three_prime_UTR
CCTAGAGGGATTACGTGAAG+TGG 0.572543 2_1:-30954923 Msa0204970:intron
GCCTTATTTGCCAAATACCT+CGG 0.573651 2_1:+30958857 None:intergenic
ATAGCAAGCCAATAGAAAAG+TGG 0.573840 2_1:-30957252 Msa0204970:CDS
TTGTTAGGGTTATGGAAGTG+GGG 0.574191 2_1:-30958784 Msa0204970:CDS
GCCGGATAAAGCTGAGCCAA+GGG 0.574471 2_1:-30958834 Msa0204970:CDS
CTTGACAAGCATAAAGTGAA+AGG 0.575554 2_1:-30957133 Msa0204970:CDS
TCCCCTCATAGGTTCTCTCA+TGG 0.575975 2_1:-30953994 Msa0204970:CDS
TCCTTTAGGGGTGAATTCGA+CGG 0.578077 2_1:-30958654 Msa0204970:CDS
TATGTTGTGAAAATGAGTCA+AGG 0.578254 2_1:-30958740 Msa0204970:CDS
TGCGATTGAATTGTGTAATG+AGG 0.578867 2_1:-30959095 Msa0204970:CDS
AAAAGAAACCAAGCGCCTTG+TGG 0.579082 2_1:+30957223 None:intergenic
TGAGAAGCGAGGAGAGAGTG+AGG 0.579616 2_1:+30959469 None:intergenic
ATAGCACTCATATCAGCAGA+TGG 0.580065 2_1:+30955827 None:intergenic
CACTCGCGTGTCATCTGAGT+CGG 0.580526 2_1:-30954153 Msa0204970:CDS
AGAATGCAATAATGTTGCCT+GGG 0.580526 2_1:-30957056 Msa0204970:CDS
TTCTTCACTCCACCTAGAAG+TGG 0.580939 2_1:-30955944 Msa0204970:CDS
ATTCAAGGGTGGCTGACCAT+GGG 0.584477 2_1:-30955698 Msa0204970:CDS
GGTTTCGGAGACAGCTGCTG+AGG 0.584565 2_1:-30959002 Msa0204970:CDS
CACAATTCAATCGCAGTCAA+CGG 0.585667 2_1:+30959103 None:intergenic
AGCTAAAGCAACAGTTGCTG+AGG 0.586473 2_1:-30953856 Msa0204970:CDS
TTACTTGGCCCACTTCTAGG+TGG 0.586631 2_1:+30955935 None:intergenic
CACGATGTCCATTATGGGCA+CGG 0.586746 2_1:+30954650 None:intergenic
GAAGTGGTGCTGAAGACAAT+GGG 0.587028 2_1:-30958311 Msa0204970:CDS
AGTATTTCTTCCAAAAGCAG+TGG 0.587499 2_1:-30957188 Msa0204970:CDS
ATCCTTGTGAACTTGTGAGA+AGG 0.589225 2_1:-30955167 Msa0204970:CDS
GGCAGACTTAGAAGAAGAAG+GGG 0.589731 2_1:-30954132 Msa0204970:CDS
ATTCTAGCTGCAGCTTCCGA+TGG 0.590327 2_1:-30954392 Msa0204970:CDS
AGGGTTGGGAATGGTTGAGG+AGG 0.591131 2_1:+30959569 None:intergenic
CATTCTTGTAGTCCTTGAGA+AGG 0.591165 2_1:+30953958 None:intergenic
AAAGTCAAGTCTTTCACTGG+TGG 0.592016 2_1:-30953600 Msa0204970:CDS
CAATAATATTGTGGTCACAA+TGG 0.592756 2_1:-30955490 Msa0204970:CDS
GCGTCGTAGAGTGGGTCTAA+GGG 0.594206 2_1:+30959550 None:intergenic
TTGCTAAAGGAAATTAACAA+GGG 0.595622 2_1:-30953660 Msa0204970:CDS
TGTTAGGGTTATGGAAGTGG+GGG 0.596595 2_1:-30958783 Msa0204970:CDS
CTTGTTGTAGAGAGGTTGCA+GGG 0.597357 2_1:+30955738 None:intergenic
ATGTTGTGAAAATGAGTCAA+GGG 0.598029 2_1:-30958739 Msa0204970:CDS
AGATGGTGTGAGGAAAGCGT+TGG 0.599015 2_1:-30958888 Msa0204970:CDS
ACAGACCGGAGTAGCGCCAC+CGG 0.599499 2_1:-30959707 Msa0204970:five_prime_UTR
ATAACTCAGGCAGTCAAGAA+GGG 0.600058 2_1:-30954080 Msa0204970:CDS
TGCACACTATCATCACCTCT+GGG 0.600442 2_1:-30955793 Msa0204970:CDS
CGGTGTGGTGGGTTTCGCGG+AGG 0.601076 2_1:+30959638 None:intergenic
TTTGCTAAAGGAAATTAACA+AGG 0.606282 2_1:-30953661 Msa0204970:CDS
TCAATGAGATGCTTAGGAGA+AGG 0.607762 2_1:-30958418 Msa0204970:CDS
AAGAAGGGAATGTGGCGTGG+GGG 0.609032 2_1:-30958625 Msa0204970:CDS
TAGAGAGATTTGCAATGGGG+AGG 0.610540 2_1:-30957392 Msa0204970:CDS
CCAAAATTAAATAAGCTACT+CGG 0.610998 2_1:-30955761 Msa0204970:CDS
ACGCTCAGCAGATTCGGAAG+CGG 0.613059 2_1:-30959318 Msa0204970:CDS
ATTGCGAAGAGCTGCAGAGT+CGG 0.613411 2_1:+30955509 None:intergenic
TTCCATGAGAGAACCTATGA+GGG 0.613927 2_1:+30953992 None:intergenic
AGCTGCTGCCTCTCTTTCCG+AGG 0.614927 2_1:-30958249 Msa0204970:intron
TGGAGGTGCTATTGATGAAG+TGG 0.616257 2_1:-30958327 Msa0204970:CDS
ATTCGACGGATGAGGAAGAA+GGG 0.616359 2_1:-30958640 Msa0204970:CDS
AGAGGAAGACGTGAGAAGCG+AGG 0.616771 2_1:+30959458 None:intergenic
TTGTTTGCAAGAGGAATACT+CGG 0.617662 2_1:+30957026 None:intergenic
AGCTCTTCGCAATAATATTG+TGG 0.617862 2_1:-30955499 Msa0204970:CDS
GTATTTGGCAAATAAGGCGC+CGG 0.619024 2_1:-30958852 Msa0204970:CDS
TTGCAAGCTTCCCATCAGCA+AGG 0.619436 2_1:+30955666 None:intergenic
TTTGAAACCGGAGCATGGGG+AGG 0.620577 2_1:-30959023 Msa0204970:CDS
ATTCAACATGCATGCAACAG+AGG 0.620770 2_1:-30956927 Msa0204970:intron
AGGTAGTGAAAAGGCTAGTG+TGG 0.621538 2_1:-30958501 Msa0204970:CDS
GGATGAGGAAGAAGGGAATG+TGG 0.622612 2_1:-30958633 Msa0204970:CDS
AGGTTCGATATATGAAGAGG+TGG 0.623247 2_1:+30957495 None:intergenic
AGCAAGGCAAAGTTTGCCCA+TGG 0.623683 2_1:+30955682 None:intergenic
TAGCACTCATATCAGCAGAT+GGG 0.623751 2_1:+30955828 None:intergenic
ATTGGAGGGATTAGGTGGGA+AGG 0.623945 2_1:+30959520 None:intergenic
GAAGCGAGGAGAGAGTGAGG+TGG 0.624812 2_1:+30959472 None:intergenic
ATGTTAGTGCTACGATTCGA+GGG 0.626901 2_1:-30958565 Msa0204970:CDS
TGCTAAAGGAAATTAACAAG+GGG 0.628435 2_1:-30953659 Msa0204970:CDS
GGCGATTGGAGGGATTAGGT+GGG 0.630744 2_1:+30959516 None:intergenic
GAAAAGTGGACTGCCCCACA+AGG 0.631853 2_1:-30957238 Msa0204970:CDS
GGCAGGTTCGATATATGAAG+AGG 0.637844 2_1:+30957492 None:intergenic
GAGTGAAGAGAGTGAAAACG+GGG 0.638437 2_1:+30959413 None:intergenic
AGTTTGAGTAGGGATTCAGA+TGG 0.638669 2_1:-30958905 Msa0204970:CDS
AAGAAACCAAGCGCCTTGTG+GGG 0.639811 2_1:+30957225 None:intergenic
AGGGATTACGTGAAGTGGAG+AGG 0.640075 2_1:-30954918 Msa0204970:CDS
TGTTTCTAAGAATCTGGCAA+AGG 0.640937 2_1:-30953790 Msa0204970:CDS
ATGCGTTCACAAGGGTCGTG+CGG 0.641329 2_1:-30953312 Msa0204970:three_prime_UTR
AGCTGTCATTTGGACTCTAG+AGG 0.642391 2_1:+30953459 None:intergenic
ATTGTTGAAGGATCCTTTAG+GGG 0.648131 2_1:-30958666 Msa0204970:CDS
TCTTCACTCCACCTAGAAGT+GGG 0.648689 2_1:-30955943 Msa0204970:CDS
AAGGTGTGTGGATGAGAAGG+CGG 0.649780 2_1:-30958399 Msa0204970:CDS
TCATTATCAGCTATTTGACG+AGG 0.652708 2_1:+30957592 None:intergenic
GATGCTTAGGAGAAGGTGTG+TGG 0.653593 2_1:-30958411 Msa0204970:CDS
ACGTTCAAAGAACTAAGTTG+TGG 0.654052 2_1:+30953627 None:intergenic
GTAGGGATTCAGATGGTGTG+AGG 0.654607 2_1:-30958898 Msa0204970:CDS
ACTGGTGGATGCGTATCTAG+AGG 0.657407 2_1:-30953585 Msa0204970:CDS
TGAAGTGGTGCTGAAGACAA+TGG 0.658212 2_1:-30958312 Msa0204970:CDS
GTTTCGTCGTCCATCTCCGG+TGG 0.662914 2_1:+30959691 None:intergenic
TGGAGATGAGTCCATTGCGG+TGG 0.663224 2_1:+30959495 None:intergenic
CGGAGATTTCTGTTACGATG+CGG 0.667244 2_1:+30959662 None:intergenic
AGACCAACCTGTACAAACAG+AGG 0.668204 2_1:+30955632 None:intergenic
GGTGCTGAAGACAATGGGAA+TGG 0.668697 2_1:-30958306 Msa0204970:CDS
AAGCGCAACGGAGGGAACGG+AGG 0.668785 2_1:+30959371 None:intergenic
TGAGTCCAACGAATCACGAA+CGG 0.669431 2_1:-30954629 Msa0204970:CDS
GAAGTGGGCCAAGTAAAGGT+CGG 0.670816 2_1:-30955928 Msa0204970:CDS
AGTCCTTGAGAAGGACCCGA+AGG 0.680364 2_1:+30953967 None:intergenic
TAATGCCGAAGTCTCAGGTG+AGG 0.684927 2_1:-30958952 Msa0204970:CDS
CCTTAGAGAGATTTGCAATG+GGG 0.688090 2_1:-30957395 Msa0204970:CDS
AGGAGATACAGAATTCCTTG+GGG 0.691571 2_1:+30957415 None:intergenic
AGGAACTGAATGTAGCCACT+CGG 0.693346 2_1:+30957612 None:intergenic
GTTACATAACCAAGATCACA+CGG 0.707602 2_1:-30955200 Msa0204970:CDS
CGACTCAGATGACACGCGAG+TGG 0.712878 2_1:+30954154 None:intergenic
TCCATGAGAGAACCTATGAG+GGG 0.716533 2_1:+30953993 None:intergenic
GCAGACTTAGAAGAAGAAGG+GGG 0.719754 2_1:-30954131 Msa0204970:CDS
GGAGATACAGAATTCCTTGG+GGG 0.722911 2_1:+30957416 None:intergenic
TGGTGGAGATGAGTCCATTG+CGG 0.728966 2_1:+30959492 None:intergenic
ATATATCCATGCGTTCACAA+GGG 0.737199 2_1:-30953320 Msa0204970:three_prime_UTR
CCGAAATGGTAACAACCGAG+TGG 0.740915 2_1:-30957627 Msa0204970:CDS
AGTGAAGAGAGTGAAAACGG+GGG 0.752960 2_1:+30959414 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATACAAATAACTTTTTTTT+AGG - chr2_1:30955056-30955075 Msa0204970:intron 10.0%
!! ATATATATATATATAGAGTT+TGG - chr2_1:30955161-30955180 Msa0204970:CDS 10.0%
!! TTATTATTCAAACATAAATT+GGG + chr2_1:30958803-30958822 None:intergenic 10.0%
!!! AATGCAAAATTTTACATATT+TGG - chr2_1:30954889-30954908 Msa0204970:CDS 15.0%
!! AAGTAGATATAATAATAACT+TGG - chr2_1:30956407-30956426 Msa0204970:intron 15.0%
!!! AAACAAAATATGTTTTGATT+AGG + chr2_1:30957480-30957499 None:intergenic 15.0%
!!! AATCAAAACATATTTTGTTT+TGG - chr2_1:30957480-30957499 Msa0204970:CDS 15.0%
!!! ATCAAAACATATTTTGTTTT+GGG - chr2_1:30957481-30957500 Msa0204970:CDS 15.0%
!! TATTATTCAAACATAAATTG+GGG + chr2_1:30958802-30958821 None:intergenic 15.0%
!! GTTATTATTCAAACATAAAT+TGG + chr2_1:30958804-30958823 None:intergenic 15.0%
!!! TTGAACATTTTTCTTGTTTT+TGG + chr2_1:30953756-30953775 None:intergenic 20.0%
!! TGAGAAATTAGTTAATGTTA+TGG - chr2_1:30953847-30953866 Msa0204970:CDS 20.0%
!! GAGAAATTAGTTAATGTTAT+GGG - chr2_1:30953848-30953867 Msa0204970:CDS 20.0%
!!! TTTTGTTATTAGTTTGAGTA+GGG - chr2_1:30954123-30954142 Msa0204970:CDS 20.0%
!! ACAAAAACCTTATGAAAAAA+GGG + chr2_1:30954826-30954845 None:intergenic 20.0%
!! AACAAAAACCTTATGAAAAA+AGG + chr2_1:30954827-30954846 None:intergenic 20.0%
!! ATTCAAGACAAAAATAACAT+AGG + chr2_1:30954925-30954944 None:intergenic 20.0%
!! TAACATAATTGCTTTCTATT+TGG - chr2_1:30955213-30955232 Msa0204970:intron 20.0%
!! TAGTAAAAAAATACCAAGAA+AGG + chr2_1:30955329-30955348 None:intergenic 20.0%
!!! TTTTCTTAATCTTTGAGAAA+TGG + chr2_1:30956350-30956369 None:intergenic 20.0%
!! ATTCATATTACATTAATCAG+AGG - chr2_1:30956435-30956454 Msa0204970:intron 20.0%
!! TTCATATTACATTAATCAGA+GGG - chr2_1:30956436-30956455 Msa0204970:intron 20.0%
!! AAGAAGAAAAATATTACTGT+CGG - chr2_1:30956680-30956699 Msa0204970:intron 20.0%
!! ATAATTTCTTAAGCATAGTT+AGG - chr2_1:30956776-30956795 Msa0204970:intron 20.0%
!! TAATTTCTTAAGCATAGTTA+GGG - chr2_1:30956777-30956796 Msa0204970:intron 20.0%
!! ATTACAGCTATTTATACAAT+TGG - chr2_1:30957169-30957188 Msa0204970:CDS 20.0%
!! TTACAGCTATTTATACAATT+GGG - chr2_1:30957170-30957189 Msa0204970:CDS 20.0%
!! AAACTATTATATGCTAAAAG+AGG + chr2_1:30958338-30958357 None:intergenic 20.0%
!! TTGAATAATAACATTAACTG+TGG - chr2_1:30958812-30958831 Msa0204970:CDS 20.0%
!! TGAATAATAACATTAACTGT+GGG - chr2_1:30958813-30958832 Msa0204970:CDS 20.0%
!! AAGAGAACTAAAAATGTATT+AGG - chr2_1:30959535-30959554 Msa0204970:CDS 20.0%
!!! TTATTGAAGCTTTTTTTGTG+TGG + chr2_1:30953293-30953312 None:intergenic 25.0%
!!! GTTTTGTTATTAGTTTGAGT+AGG - chr2_1:30954122-30954141 Msa0204970:CDS 25.0%
!!! ATTTTATAATGGAGGTTGTT+AGG - chr2_1:30954239-30954258 Msa0204970:intron 25.0%
!!! TTTTATAATGGAGGTTGTTA+GGG - chr2_1:30954240-30954259 Msa0204970:intron 25.0%
!!! TTTGTTACCCTTTTTTCATA+AGG - chr2_1:30954816-30954835 Msa0204970:intron 25.0%
!!! ACTTTTTTTTAGGCATTCTT+TGG - chr2_1:30955066-30955085 Msa0204970:intron 25.0%
! ATATATAGAGTTTGGTTAAG+AGG - chr2_1:30955169-30955188 Msa0204970:CDS 25.0%
! TATATAGAGTTTGGTTAAGA+GGG - chr2_1:30955170-30955189 Msa0204970:CDS 25.0%
!! ATTGCTTTCTATTTGGATTT+TGG - chr2_1:30955220-30955239 Msa0204970:intron 25.0%
! ATTCAAGAAGGAAAGATAAT+TGG + chr2_1:30955274-30955293 None:intergenic 25.0%
!! ATCGACAGATATATGATTTT+TGG - chr2_1:30955348-30955367 Msa0204970:intron 25.0%
!! GATTTTACTTAACGATATGT+AGG - chr2_1:30955370-30955389 Msa0204970:intron 25.0%
! CCTCTAGTATTAAAAAGAAA+GGG - chr2_1:30955567-30955586 Msa0204970:intron 25.0%
! AGTATTAAAAAGAAAGGGAA+AGG - chr2_1:30955572-30955591 Msa0204970:intron 25.0%
! AAAAAAATTTGCACAAACCT+GGG - chr2_1:30955683-30955702 Msa0204970:CDS 25.0%
! GTTGAATCACAAAATTGTTA+CGG - chr2_1:30955718-30955737 Msa0204970:CDS 25.0%
! AATGCATTTATTTGTACAAC+TGG + chr2_1:30955944-30955963 None:intergenic 25.0%
! TGTACAAATAAATGCATTTG+AGG - chr2_1:30955946-30955965 Msa0204970:CDS 25.0%
! GTACAAATAAATGCATTTGA+GGG - chr2_1:30955947-30955966 Msa0204970:CDS 25.0%
!! ACTAAAAATAGCAATCGTTT+TGG - chr2_1:30956496-30956515 Msa0204970:intron 25.0%
!!! AATCGTTTTGGACTTTTTTT+TGG - chr2_1:30956508-30956527 Msa0204970:intron 25.0%
! ATAGAAGTGATAATTTCAAG+AGG + chr2_1:30956578-30956597 None:intergenic 25.0%
! TTGTGAAACTAAGATTATCA+TGG + chr2_1:30956731-30956750 None:intergenic 25.0%
! AAGAAATTATCATAGACTGT+GGG + chr2_1:30956766-30956785 None:intergenic 25.0%
! TAAGAAATTATCATAGACTG+TGG + chr2_1:30956767-30956786 None:intergenic 25.0%
! AATTTCTTAAGCATAGTTAG+GGG - chr2_1:30956778-30956797 Msa0204970:intron 25.0%
!!! CGAGTAGCTTATTTAATTTT+GGG + chr2_1:30957279-30957298 None:intergenic 25.0%
! CCAAAATTAAATAAGCTACT+CGG - chr2_1:30957277-30957296 Msa0204970:CDS 25.0%
!! TCTCCTTCTTTTTATATTCA+AGG - chr2_1:30957325-30957344 Msa0204970:CDS 25.0%
!! CTCCTTCTTTTTATATTCAA+GGG - chr2_1:30957326-30957345 Msa0204970:CDS 25.0%
! GTAATGAATGATATAAACTG+AGG - chr2_1:30957699-30957718 Msa0204970:intron 25.0%
! AGAATTATTACTTTATGCTG+AGG - chr2_1:30957722-30957741 Msa0204970:intron 25.0%
!!! CATCAGTTAAAGGTATTAAA+AGG + chr2_1:30957977-30957996 None:intergenic 25.0%
!!! TTACTTTTCTTTTATCCTAG+AGG - chr2_1:30958100-30958119 Msa0204970:intron 25.0%
!! TACTTTTCTTTTATCCTAGA+GGG - chr2_1:30958101-30958120 Msa0204970:intron 25.0%
! TTGATGAATCAGAAAAGATT+AGG - chr2_1:30958175-30958194 Msa0204970:intron 25.0%
!!! CTCTTTGGAAATATTTTGAA+AGG - chr2_1:30958213-30958232 Msa0204970:intron 25.0%
!!! AGCATATAATAGTTTTGTTG+AGG - chr2_1:30958343-30958362 Msa0204970:CDS 25.0%
! TTCTAACCAAATGCTAATTT+GGG + chr2_1:30958467-30958486 None:intergenic 25.0%
! TTTCTAACCAAATGCTAATT+TGG + chr2_1:30958468-30958487 None:intergenic 25.0%
!! AAGCAATTTTTGAATCACTT+GGG + chr2_1:30959317-30959336 None:intergenic 25.0%
! TAATTTCCTTTAGCAAAGAA+CGG + chr2_1:30959374-30959393 None:intergenic 25.0%
! TTTGCTAAAGGAAATTAACA+AGG - chr2_1:30959377-30959396 Msa0204970:CDS 25.0%
! TTGCTAAAGGAAATTAACAA+GGG - chr2_1:30959378-30959397 Msa0204970:CDS 25.0%
!!! TTGTTTTAACTTTCCCAAAG+CGG - chr2_1:30953249-30953268 Msa0204970:three_prime_UTR 30.0%
TCAACTTTCTGTACAGAATT+TGG + chr2_1:30953803-30953822 None:intergenic 30.0%
!! TGTACAGAAAGTTGATGTTA+GGG - chr2_1:30953808-30953827 Msa0204970:CDS 30.0%
TGGGTTTAATTCATCTTGAT+CGG - chr2_1:30953867-30953886 Msa0204970:CDS 30.0%
AATCAACGATTTCAAACTCT+CGG + chr2_1:30953897-30953916 None:intergenic 30.0%
!! GTGTTCAAAGATTTTGAAAG+AGG - chr2_1:30953991-30954010 Msa0204970:CDS 30.0%
!!! TTTGAAAGAGGTTTTGAAAC+CGG - chr2_1:30954003-30954022 Msa0204970:CDS 30.0%
TATGTTGTGAAAATGAGTCA+AGG - chr2_1:30954298-30954317 Msa0204970:intron 30.0%
ATGTTGTGAAAATGAGTCAA+GGG - chr2_1:30954299-30954318 Msa0204970:intron 30.0%
!! GAAAACCAATTTAAGGCTTT+TGG - chr2_1:30954321-30954340 Msa0204970:intron 30.0%
! GTTTTTATCAGGTAGTGAAA+AGG - chr2_1:30954528-30954547 Msa0204970:intron 30.0%
!!! TGTGGTTTTGAAAGAGTTTA+TGG - chr2_1:30954555-30954574 Msa0204970:intron 30.0%
!!! GTGGTTTTGAAAGAGTTTAT+GGG - chr2_1:30954556-30954575 Msa0204970:intron 30.0%
! TTGAAAGAGTTTATGGGTTT+TGG - chr2_1:30954562-30954581 Msa0204970:intron 30.0%
TTCTTTGGTTATTTAGTGGA+AGG - chr2_1:30955081-30955100 Msa0204970:intron 30.0%
TCTTTGGTTATTTAGTGGAA+GGG - chr2_1:30955082-30955101 Msa0204970:intron 30.0%
ATATAGAGTTTGGTTAAGAG+GGG - chr2_1:30955171-30955190 Msa0204970:CDS 30.0%
!!! TTTGGATTTTGGTTTACTAG+TGG - chr2_1:30955231-30955250 Msa0204970:intron 30.0%
!!! TTGGATTTTGGTTTACTAGT+GGG - chr2_1:30955232-30955251 Msa0204970:intron 30.0%
!! CTTGTTTCAAGAACTTGTTT+TGG - chr2_1:30955496-30955515 Msa0204970:CDS 30.0%
! TTCTTTTTAATACTAGAGGC+AGG + chr2_1:30955566-30955585 None:intergenic 30.0%
GCCTCTAGTATTAAAAAGAA+AGG - chr2_1:30955566-30955585 Msa0204970:intron 30.0%
! CCCTTTCTTTTTAATACTAG+AGG + chr2_1:30955570-30955589 None:intergenic 30.0%
GAAAAAAATTTGCACAAACC+TGG - chr2_1:30955682-30955701 Msa0204970:CDS 30.0%
GGCACTTCAGAATATAATTA+AGG - chr2_1:30955739-30955758 Msa0204970:CDS 30.0%
AACTAAACAAATCCTAACAC+TGG - chr2_1:30956171-30956190 Msa0204970:intron 30.0%
TGCAATTGCGACAATTATTA+TGG - chr2_1:30956543-30956562 Msa0204970:intron 30.0%
GCAATTGCGACAATTATTAT+GGG - chr2_1:30956544-30956563 Msa0204970:intron 30.0%
AAATTCCAAGGACTTATAGA+AGG + chr2_1:30956601-30956620 None:intergenic 30.0%
ATCTTAGTTTCACAAGCAAT+CGG - chr2_1:30956736-30956755 Msa0204970:intron 30.0%
AGAAATTATCATAGACTGTG+GGG + chr2_1:30956765-30956784 None:intergenic 30.0%
! AAGAAGCAATAGTCTTGAAA+TGG - chr2_1:30956990-30957009 Msa0204970:CDS 30.0%
! AGAAGCAATAGTCTTGAAAT+GGG - chr2_1:30956991-30957010 Msa0204970:CDS 30.0%
TTCTATTATTTGAGAAGCTC+TGG + chr2_1:30957032-30957051 None:intergenic 30.0%
!! CCGAGTAGCTTATTTAATTT+TGG + chr2_1:30957280-30957299 None:intergenic 30.0%
CACCCTTGAATATAAAAAGA+AGG + chr2_1:30957331-30957350 None:intergenic 30.0%
! CTTCTTTTTATATTCAAGGG+TGG - chr2_1:30957329-30957348 Msa0204970:CDS 30.0%
CAATAATATTGTGGTCACAA+TGG - chr2_1:30957548-30957567 Msa0204970:CDS 30.0%
! GAATAGATTAGAAGCATAGA+GGG + chr2_1:30958011-30958030 None:intergenic 30.0%
! TTTTGGATCAATACAAGGTA+TGG + chr2_1:30958033-30958052 None:intergenic 30.0%
ATTCATCAACAAGTGACAAA+AGG + chr2_1:30958164-30958183 None:intergenic 30.0%
TTTACCTGATCGAAAAAAGT+TGG + chr2_1:30958439-30958458 None:intergenic 30.0%
!!! AACTTTTTTCGATCAGGTAA+AGG - chr2_1:30958438-30958457 Msa0204970:CDS 30.0%
!! TCTGTTGCATCATTTTTGTT+AGG - chr2_1:30958515-30958534 Msa0204970:CDS 30.0%
!! CTGTTGCATCATTTTTGTTA+GGG - chr2_1:30958516-30958535 Msa0204970:CDS 30.0%
!! TGTTGCATCATTTTTGTTAG+GGG - chr2_1:30958517-30958536 Msa0204970:CDS 30.0%
TGTTTCTCTACTAAAGCAAA+TGG - chr2_1:30958579-30958598 Msa0204970:CDS 30.0%
TAGAATTTCTGCACATAACT+TGG + chr2_1:30958632-30958651 None:intergenic 30.0%
TTCAATATTGAGCATACCAT+CGG + chr2_1:30958665-30958684 None:intergenic 30.0%
!!! GTATTGATTTTTACCAGCAA+TGG - chr2_1:30958712-30958731 Msa0204970:CDS 30.0%
! CAGGATACTTTTCAAATTCT+TGG - chr2_1:30958838-30958857 Msa0204970:CDS 30.0%
AAATGGATCTTCAACTAGAA+AGG - chr2_1:30958933-30958952 Msa0204970:CDS 30.0%
! GAATGAGATTGATGACATAT+TGG - chr2_1:30959098-30959117 Msa0204970:CDS 30.0%
!!! GATTGATTTGCAACTGATTT+TGG + chr2_1:30959222-30959241 None:intergenic 30.0%
ACAAACACATGAACAAAATG+AGG - chr2_1:30959278-30959297 Msa0204970:CDS 30.0%
! AGCAATTTTTGAATCACTTG+GGG + chr2_1:30959316-30959335 None:intergenic 30.0%
! GAAGCAATTTTTGAATCACT+TGG + chr2_1:30959318-30959337 None:intergenic 30.0%
ATTCAAAAATTGCTTCAGCA+AGG - chr2_1:30959322-30959341 Msa0204970:CDS 30.0%
TTCAAAAATTGCTTCAGCAA+GGG - chr2_1:30959323-30959342 Msa0204970:CDS 30.0%
AATTTCCTTTAGCAAAGAAC+GGG + chr2_1:30959373-30959392 None:intergenic 30.0%
TGCTAAAGGAAATTAACAAG+GGG - chr2_1:30959379-30959398 Msa0204970:CDS 30.0%
!!! TAGGTTTTAGTTTTCCTTCT+AGG - chr2_1:30959554-30959573 Msa0204970:CDS 30.0%
!!! TGTTTTAACTTTCCCAAAGC+GGG - chr2_1:30953250-30953269 Msa0204970:three_prime_UTR 35.0%
! TGAATTTTTGTTCCCGCTTT+GGG + chr2_1:30953265-30953284 None:intergenic 35.0%
! TTGAATTTTTGTTCCCGCTT+TGG + chr2_1:30953266-30953285 None:intergenic 35.0%
!! TAGTGTTTTTGAAAGCGCAA+CGG + chr2_1:30953682-30953701 None:intergenic 35.0%
TGTACAGAATTTGGCGAATT+AGG + chr2_1:30953794-30953813 None:intergenic 35.0%
!! CTGTACAGAAAGTTGATGTT+AGG - chr2_1:30953807-30953826 Msa0204970:CDS 35.0%
ATCAACGATTTCAAACTCTC+GGG + chr2_1:30953896-30953915 None:intergenic 35.0%
TGCGATTGAATTGTGTAATG+AGG - chr2_1:30953943-30953962 Msa0204970:CDS 35.0%
TTGTGTAATGAGGTTCAGTA+TGG - chr2_1:30953953-30953972 Msa0204970:CDS 35.0%
!! GGTTAATTTTCCGAGGTATT+TGG - chr2_1:30954171-30954190 Msa0204970:CDS 35.0%
GTCAAGGGAAAACCAATTTA+AGG - chr2_1:30954314-30954333 Msa0204970:intron 35.0%
!! AACCAATTTAAGGCTTTTGG+CGG - chr2_1:30954324-30954343 Msa0204970:intron 35.0%
GAATCTTGTGACATTGTTGA+AGG - chr2_1:30954360-30954379 Msa0204970:CDS 35.0%
ACATTGTTGAAGGATCCTTT+AGG - chr2_1:30954370-30954389 Msa0204970:CDS 35.0%
CATTGTTGAAGGATCCTTTA+GGG - chr2_1:30954371-30954390 Msa0204970:CDS 35.0%
ATTGTTGAAGGATCCTTTAG+GGG - chr2_1:30954372-30954391 Msa0204970:CDS 35.0%
!!! TTTTGGTGATGGAAATGATG+CGG - chr2_1:30954579-30954598 Msa0204970:intron 35.0%
ACGAATGCTAAGAAGTGAAT+CGG + chr2_1:30954764-30954783 None:intergenic 35.0%
!! AAAGGGTAACAAAAGTACCT+CGG + chr2_1:30954809-30954828 None:intergenic 35.0%
!! TTTTGTTGTGCAGTGTTTTG+TGG - chr2_1:30954840-30954859 Msa0204970:CDS 35.0%
GGCATTCTTTGGTTATTTAG+TGG - chr2_1:30955077-30955096 Msa0204970:intron 35.0%
!!! TGGATTTTGGTTTACTAGTG+GGG - chr2_1:30955233-30955252 Msa0204970:intron 35.0%
GAAAAAGAACAGGACTTTCA+GGG + chr2_1:30955307-30955326 None:intergenic 35.0%
! TCCTGTTCTTTTTCCTTTCT+TGG - chr2_1:30955313-30955332 Msa0204970:intron 35.0%
ACCAAGAAAGGAAAAAGAAC+AGG + chr2_1:30955317-30955336 None:intergenic 35.0%
TCATTATCAGCTATTTGACG+AGG + chr2_1:30955449-30955468 None:intergenic 35.0%
ACAAGTTCTCACATTCTTCT+TGG + chr2_1:30955481-30955500 None:intergenic 35.0%
GAAAGGTTTAGACAACGAAA+TGG - chr2_1:30955589-30955608 Msa0204970:intron 35.0%
AAGGAGATACAGAATTCCTT+GGG + chr2_1:30955627-30955646 None:intergenic 35.0%
TAAGGAGATACAGAATTCCT+TGG + chr2_1:30955628-30955647 None:intergenic 35.0%
TCCTTAGAGAGATTTGCAAT+GGG - chr2_1:30955642-30955661 Msa0204970:CDS 35.0%
!!! GTGCAAATTTTTTTCACCCA+AGG + chr2_1:30955677-30955696 None:intergenic 35.0%
!!! ACTTTTCTATTGGCTTGCTA+TGG + chr2_1:30955787-30955806 None:intergenic 35.0%
ATAGCAAGCCAATAGAAAAG+TGG - chr2_1:30955786-30955805 Msa0204970:CDS 35.0%
AGTATTTCTTCCAAAAGCAG+TGG - chr2_1:30955850-30955869 Msa0204970:CDS 35.0%
GGGAATTTCTTCATCATCAT+TGG - chr2_1:30955876-30955895 Msa0204970:CDS 35.0%
CTTGACAAGCATAAAGTGAA+AGG - chr2_1:30955905-30955924 Msa0204970:CDS 35.0%
TAGAATGCAATAATGTTGCC+TGG - chr2_1:30955981-30956000 Msa0204970:CDS 35.0%
AGAATGCAATAATGTTGCCT+GGG - chr2_1:30955982-30956001 Msa0204970:CDS 35.0%
TTGTTTGCAAGAGGAATACT+CGG + chr2_1:30956015-30956034 None:intergenic 35.0%
CATTAGAGATTGTTTGCAAG+AGG + chr2_1:30956024-30956043 None:intergenic 35.0%
AGATTAAGAAGTCCAGTGTT+AGG + chr2_1:30956186-30956205 None:intergenic 35.0%
! AATCTTGCCTTATTCTTGAG+TGG - chr2_1:30956201-30956220 Msa0204970:intron 35.0%
TTACACATACATGCCATCAA+GGG + chr2_1:30956229-30956248 None:intergenic 35.0%
ATTACACATACATGCCATCA+AGG + chr2_1:30956230-30956249 None:intergenic 35.0%
AGTTCATAAACTACGTTCTC+CGG - chr2_1:30956305-30956324 Msa0204970:intron 35.0%
TCAAATGCAACAGAAACATC+CGG + chr2_1:30956327-30956346 None:intergenic 35.0%
TCTATCCTTCTATAAGTCCT+TGG - chr2_1:30956593-30956612 Msa0204970:intron 35.0%
CAGATGGAGAAAAAATTCCA+AGG + chr2_1:30956613-30956632 None:intergenic 35.0%
ATGAAAGCTTAAGCATCAGA+TGG + chr2_1:30956629-30956648 None:intergenic 35.0%
CTATATTCCTCTGTTTGTAC+AGG - chr2_1:30957399-30957418 Msa0204970:CDS 35.0%
!!! GACTGATTTTTTATGCCTCA+AGG - chr2_1:30957432-30957451 Msa0204970:CDS 35.0%
!!! ATTTTTTATGCCTCAAGGAC+TGG - chr2_1:30957437-30957456 Msa0204970:CDS 35.0%
ATAACATATACCAGTCCTTG+AGG + chr2_1:30957450-30957469 None:intergenic 35.0%
!!! TTGTTTTGGGATACAATTGC+AGG - chr2_1:30957494-30957513 Msa0204970:CDS 35.0%
AGCTCTTCGCAATAATATTG+TGG - chr2_1:30957539-30957558 Msa0204970:CDS 35.0%
AGTCCAATGTTCACATTATG+CGG - chr2_1:30957749-30957768 Msa0204970:intron 35.0%
ATTCCGCATAATGTGAACAT+TGG + chr2_1:30957755-30957774 None:intergenic 35.0%
TGTGATCTTGGTTATGTAAC+TGG + chr2_1:30957838-30957857 None:intergenic 35.0%
GTTACATAACCAAGATCACA+CGG - chr2_1:30957838-30957857 Msa0204970:intron 35.0%
AGAAACAGTGTAGTCATAGA+AGG + chr2_1:30957946-30957965 None:intergenic 35.0%
! GGAATAGATTAGAAGCATAG+AGG + chr2_1:30958012-30958031 None:intergenic 35.0%
! CAGTTAGCAGATTTTCTCTT+TGG - chr2_1:30958198-30958217 Msa0204970:intron 35.0%
! AAAGGTTTGAAGCTTTACCT+CGG - chr2_1:30958231-30958250 Msa0204970:intron 35.0%
!!! TGTTTTTTTGTCACCAGTCA+AGG - chr2_1:30958310-30958329 Msa0204970:CDS 35.0%
!!! AAAGCCAACTTTTTTCGATC+AGG - chr2_1:30958432-30958451 Msa0204970:CDS 35.0%
CTCAATATTGAAGATGCAAC+TGG - chr2_1:30958673-30958692 Msa0204970:CDS 35.0%
TGTGTGTATTCACAATAGTG+CGG + chr2_1:30958750-30958769 None:intergenic 35.0%
ATAACATTAACTGTGGGATC+AGG - chr2_1:30958819-30958838 Msa0204970:CDS 35.0%
AACTAGAAAGGCTATAACTC+AGG - chr2_1:30958945-30958964 Msa0204970:CDS 35.0%
!! TGGGTATAGTGTTTTGAATG+AGG + chr2_1:30958984-30959003 None:intergenic 35.0%
CGTTTCAACTCTATGAAGAT+GGG + chr2_1:30959003-30959022 None:intergenic 35.0%
ACGTTTCAACTCTATGAAGA+TGG + chr2_1:30959004-30959023 None:intergenic 35.0%
CATAGAGTTGAAACGTCTAT+TGG - chr2_1:30959008-30959027 Msa0204970:CDS 35.0%
!!! ATTTGCAACTGATTTTGGCT+TGG + chr2_1:30959217-30959236 None:intergenic 35.0%
! ACCTGATGTTTCTAAGAATC+TGG - chr2_1:30959242-30959261 Msa0204970:CDS 35.0%
! TGTTTCTAAGAATCTGGCAA+AGG - chr2_1:30959248-30959267 Msa0204970:CDS 35.0%
! GCAATTTTTGAATCACTTGG+GGG + chr2_1:30959315-30959334 None:intergenic 35.0%
ACGTTCAAAGAACTAAGTTG+TGG + chr2_1:30959414-30959433 None:intergenic 35.0%
! CATTGTTGCTTAATGCTGAT+CGG - chr2_1:30959640-30959659 Msa0204970:CDS 35.0%
AATATATCCATGCGTTCACA+AGG - chr2_1:30959717-30959736 Msa0204970:five_prime_UTR 35.0%
ATATATCCATGCGTTCACAA+GGG - chr2_1:30959718-30959737 Msa0204970:five_prime_UTR 35.0%
AGGAGTGAAGAGAGTGAAAA+CGG + chr2_1:30953630-30953649 None:intergenic 40.0%
! GAGCGTTGTTATTAGGGTTT+GGG + chr2_1:30953706-30953725 None:intergenic 40.0%
! TGAGCGTTGTTATTAGGGTT+TGG + chr2_1:30953707-30953726 None:intergenic 40.0%
! TCTGCTGAGCGTTGTTATTA+GGG + chr2_1:30953712-30953731 None:intergenic 40.0%
! ATCTGCTGAGCGTTGTTATT+AGG + chr2_1:30953713-30953732 None:intergenic 40.0%
ATAACAACGCTCAGCAGATT+CGG - chr2_1:30953714-30953733 Msa0204970:CDS 40.0%
CACAATTCAATCGCAGTCAA+CGG + chr2_1:30953938-30953957 None:intergenic 40.0%
TGAGGTTCAGTATGGTAGAT+TGG - chr2_1:30953961-30953980 Msa0204970:CDS 40.0%
GTTCAGTATGGTAGATTGGT+TGG - chr2_1:30953965-30953984 Msa0204970:CDS 40.0%
GACTTCGGCATTACAACAAA+AGG + chr2_1:30954079-30954098 None:intergenic 40.0%
AGTTTGAGTAGGGATTCAGA+TGG - chr2_1:30954133-30954152 Msa0204970:CDS 40.0%
!!! AAGCGTTGGTTAATTTTCCG+AGG - chr2_1:30954164-30954183 Msa0204970:CDS 40.0%
! TCCGAGGTATTTGGCAAATA+AGG - chr2_1:30954180-30954199 Msa0204970:CDS 40.0%
!! GCCTTATTTGCCAAATACCT+CGG + chr2_1:30954184-30954203 None:intergenic 40.0%
!! GTTGGCGGTGGATTTTATAA+TGG - chr2_1:30954228-30954247 Msa0204970:intron 40.0%
AATGGAGGTTGTTAGGGTTA+TGG - chr2_1:30954246-30954265 Msa0204970:intron 40.0%
GTTGTTAGGGTTATGGAAGT+GGG - chr2_1:30954253-30954272 Msa0204970:intron 40.0%
TTGTTAGGGTTATGGAAGTG+GGG - chr2_1:30954254-30954273 Msa0204970:intron 40.0%
AACCGCCAAAAGCCTTAAAT+TGG + chr2_1:30954329-30954348 None:intergenic 40.0%
ATGTTAGTGCTACGATTCGA+GGG - chr2_1:30954473-30954492 Msa0204970:CDS 40.0%
! CAGGTTGTTGGGTTTTTATC+AGG - chr2_1:30954517-30954536 Msa0204970:intron 40.0%
!! GAGTTTATGGGTTTTGGTGA+TGG - chr2_1:30954568-30954587 Msa0204970:intron 40.0%
!! TTTGGTGATGGAAATGATGC+GGG - chr2_1:30954580-30954599 Msa0204970:intron 40.0%
AGGGAATCAATGAGATGCTT+AGG - chr2_1:30954614-30954633 Msa0204970:CDS 40.0%
TCAATGAGATGCTTAGGAGA+AGG - chr2_1:30954620-30954639 Msa0204970:CDS 40.0%
ACTAACTTGACTGCTCTACT+TGG - chr2_1:30954691-30954710 Msa0204970:CDS 40.0%
GGAACTAGTGAGATTCAAGA+AGG + chr2_1:30955286-30955305 None:intergenic 40.0%
GGAAAAAGAACAGGACTTTC+AGG + chr2_1:30955308-30955327 None:intergenic 40.0%
!! CAGCTGCAGTTCTAGATATT+CGG + chr2_1:30955523-30955542 None:intergenic 40.0%
AGGTTCGATATATGAAGAGG+TGG + chr2_1:30955546-30955565 None:intergenic 40.0%
AGGAGATACAGAATTCCTTG+GGG + chr2_1:30955626-30955645 None:intergenic 40.0%
CTCCTTAGAGAGATTTGCAA+TGG - chr2_1:30955641-30955660 Msa0204970:CDS 40.0%
CCTTAGAGAGATTTGCAATG+GGG - chr2_1:30955643-30955662 Msa0204970:CDS 40.0%
CAAACCTGGGCAAAAAGAAA+CGG - chr2_1:30955696-30955715 Msa0204970:CDS 40.0%
! CGCTTGGTTTCTTTTATCAG+AGG - chr2_1:30955823-30955842 Msa0204970:CDS 40.0%
!! TGGCTCATAACTTGCTCAAA+CGG - chr2_1:30956080-30956099 Msa0204970:CDS 40.0%
ATTCAACATGCATGCAACAG+AGG - chr2_1:30956111-30956130 Msa0204970:CDS 40.0%
CGACAATTATTATGGGAGAC+AGG - chr2_1:30956551-30956570 Msa0204970:intron 40.0%
ATTCACACACATCCTTCATG+CGG - chr2_1:30956652-30956671 Msa0204970:intron 40.0%
!!! GAATTGCTACTTTTGCTGAC+AGG - chr2_1:30956904-30956923 Msa0204970:intron 40.0%
TAGCACTCATATCAGCAGAT+GGG + chr2_1:30957213-30957232 None:intergenic 40.0%
ATAGCACTCATATCAGCAGA+TGG + chr2_1:30957214-30957233 None:intergenic 40.0%
! AGGAGATTCTTGTTGTAGAG+AGG + chr2_1:30957311-30957330 None:intergenic 40.0%
ATTCCTCTGTTTGTACAGGT+TGG - chr2_1:30957403-30957422 Msa0204970:CDS 40.0%
ACAATTGCAGGAGCTTGAAA+AGG - chr2_1:30957506-30957525 Msa0204970:CDS 40.0%
! CAATGGCAGACTTTTGTGTT+CGG - chr2_1:30957565-30957584 Msa0204970:CDS 40.0%
GGTACACTGCTCTTATTGAT+TGG - chr2_1:30957586-30957605 Msa0204970:CDS 40.0%
ATCCTTGTGAACTTGTGAGA+AGG - chr2_1:30957871-30957890 Msa0204970:intron 40.0%
CGAGTATGGACATCAGTTAA+AGG + chr2_1:30957987-30958006 None:intergenic 40.0%
AGGTGTCCCAAATTAGCATT+TGG - chr2_1:30958458-30958477 Msa0204970:CDS 40.0%
AAAGGTTGCTAGAAGATGCT+CGG + chr2_1:30958608-30958627 None:intergenic 40.0%
TTCTGCACATAACTTGGCAA+AGG + chr2_1:30958626-30958645 None:intergenic 40.0%
! GAAAACTTGATGACCATTGC+TGG + chr2_1:30958728-30958747 None:intergenic 40.0%
TATAACTCAGGCAGTCAAGA+AGG - chr2_1:30958957-30958976 Msa0204970:CDS 40.0%
ATAACTCAGGCAGTCAAGAA+GGG - chr2_1:30958958-30958977 Msa0204970:CDS 40.0%
TTCCATGAGAGAACCTATGA+GGG + chr2_1:30959049-30959068 None:intergenic 40.0%
ATTCCATGAGAGAACCTATG+AGG + chr2_1:30959050-30959069 None:intergenic 40.0%
CATTCTTGTAGTCCTTGAGA+AGG + chr2_1:30959083-30959102 None:intergenic 40.0%
GCCAGATTCTTAGAAACATC+AGG + chr2_1:30959246-30959265 None:intergenic 40.0%
CCAGTGAAAGACTTGACTTT+GGG + chr2_1:30959438-30959457 None:intergenic 40.0%
ACCAGTGAAAGACTTGACTT+TGG + chr2_1:30959439-30959458 None:intergenic 40.0%
AAAGTCAAGTCTTTCACTGG+TGG - chr2_1:30959438-30959457 Msa0204970:CDS 40.0%
! TCCAAATGACAGCTCTTTTC+AGG - chr2_1:30959588-30959607 Msa0204970:CDS 40.0%
AAATCTCGTTCTGCACAGAC+CGG - chr2_1:30953317-30953336 Msa0204970:three_prime_UTR 45.0%
GGAGATTTCTGTTACGATGC+GGG + chr2_1:30953378-30953397 None:intergenic 45.0%
CGGAGATTTCTGTTACGATG+CGG + chr2_1:30953379-30953398 None:intergenic 45.0%
!! TTGTGGATTTTCGGTGTGGT+GGG + chr2_1:30953414-30953433 None:intergenic 45.0%
! GGAGAGTGGTTGTGGATTTT+CGG + chr2_1:30953423-30953442 None:intergenic 45.0%
GAGAGAAGAGAGGGATTGTT+CGG + chr2_1:30953444-30953463 None:intergenic 45.0%
GATTAGGTGGGAAGGTGAAA+CGG + chr2_1:30953513-30953532 None:intergenic 45.0%
AGTGAAGAGAGTGAAAACGG+GGG + chr2_1:30953627-30953646 None:intergenic 45.0%
GAGTGAAGAGAGTGAAAACG+GGG + chr2_1:30953628-30953647 None:intergenic 45.0%
GGAGTGAAGAGAGTGAAAAC+GGG + chr2_1:30953629-30953648 None:intergenic 45.0%
!! GTTTTTGAAAGCGCAACGGA+GGG + chr2_1:30953678-30953697 None:intergenic 45.0%
!! TGTTTTTGAAAGCGCAACGG+AGG + chr2_1:30953679-30953698 None:intergenic 45.0%
!!! AGGTTTTGAAACCGGAGCAT+GGG - chr2_1:30954011-30954030 Msa0204970:CDS 45.0%
!! GACAGCTGCTGAGGTTTTAA+AGG - chr2_1:30954045-30954064 Msa0204970:CDS 45.0%
TGTTGTAATGCCGAAGTCTC+AGG - chr2_1:30954081-30954100 Msa0204970:CDS 45.0%
AAACTCCTCACCTGAGACTT+CGG + chr2_1:30954094-30954113 None:intergenic 45.0%
GTATTTGGCAAATAAGGCGC+CGG - chr2_1:30954186-30954205 Msa0204970:CDS 45.0%
!! GGCGGTGGATTTTATAATGG+AGG - chr2_1:30954231-30954250 Msa0204970:intron 45.0%
GGTTGTTAGGGTTATGGAAG+TGG - chr2_1:30954252-30954271 Msa0204970:intron 45.0%
TGTTAGGGTTATGGAAGTGG+GGG - chr2_1:30954255-30954274 Msa0204970:intron 45.0%
! TCCTTTAGGGGTGAATTCGA+CGG - chr2_1:30954384-30954403 Msa0204970:CDS 45.0%
AATTCGACGGATGAGGAAGA+AGG - chr2_1:30954397-30954416 Msa0204970:CDS 45.0%
ATTCGACGGATGAGGAAGAA+GGG - chr2_1:30954398-30954417 Msa0204970:CDS 45.0%
GATGTTAGTGCTACGATTCG+AGG - chr2_1:30954472-30954491 Msa0204970:CDS 45.0%
AGGTAGTGAAAAGGCTAGTG+TGG - chr2_1:30954537-30954556 Msa0204970:intron 45.0%
AACTTGACTGCTCTACTTGG+AGG - chr2_1:30954694-30954713 Msa0204970:CDS 45.0%
!! TGGAGGTGCTATTGATGAAG+TGG - chr2_1:30954711-30954730 Msa0204970:CDS 45.0%
! TGAAGTGGTGCTGAAGACAA+TGG - chr2_1:30954726-30954745 Msa0204970:intron 45.0%
! GAAGTGGTGCTGAAGACAAT+GGG - chr2_1:30954727-30954746 Msa0204970:intron 45.0%
!! CAAAAGTACCTCGGAAAGAG+AGG + chr2_1:30954800-30954819 None:intergenic 45.0%
! TTGTGCAGTGTTTTGTGGAG+AGG - chr2_1:30954845-30954864 Msa0204970:CDS 45.0%
AGAGTTTGGTTAAGAGGGGA+AGG - chr2_1:30955175-30955194 Msa0204970:CDS 45.0%
TTGGTTTACTAGTGGGGTTG+AGG - chr2_1:30955239-30955258 Msa0204970:intron 45.0%
CAGAACATTCTCAGCCGAAA+TGG - chr2_1:30955397-30955416 Msa0204970:intron 45.0%
CCACTCGGTTGTTACCATTT+CGG + chr2_1:30955414-30955433 None:intergenic 45.0%
AGGAACTGAATGTAGCCACT+CGG + chr2_1:30955429-30955448 None:intergenic 45.0%
GGCAGGTTCGATATATGAAG+AGG + chr2_1:30955549-30955568 None:intergenic 45.0%
GGAGATACAGAATTCCTTGG+GGG + chr2_1:30955625-30955644 None:intergenic 45.0%
CCCCATTGCAAATCTCTCTA+AGG + chr2_1:30955646-30955665 None:intergenic 45.0%
TAGAGAGATTTGCAATGGGG+AGG - chr2_1:30955646-30955665 Msa0204970:CDS 45.0%
! TCAACCGTTTCTTTTTGCCC+AGG + chr2_1:30955703-30955722 None:intergenic 45.0%
AAAGAAACCAAGCGCCTTGT+GGG + chr2_1:30955817-30955836 None:intergenic 45.0%
AAAAGAAACCAAGCGCCTTG+TGG + chr2_1:30955818-30955837 None:intergenic 45.0%
TTCTTCCAAAAGCAGTGGAC+TGG - chr2_1:30955855-30955874 Msa0204970:CDS 45.0%
! TCTTCCAAAAGCAGTGGACT+GGG - chr2_1:30955856-30955875 Msa0204970:CDS 45.0%
! AATTCCCAGTCCACTGCTTT+TGG + chr2_1:30955863-30955882 None:intergenic 45.0%
AAATCAGCAGCAGGATCAGT+TGG + chr2_1:30956061-30956080 None:intergenic 45.0%
! AACTGATCCTGCTGCTGATT+TGG - chr2_1:30956060-30956079 Msa0204970:CDS 45.0%
TTATGAGCCAAATCAGCAGC+AGG + chr2_1:30956070-30956089 None:intergenic 45.0%
!! GGCTCATAACTTGCTCAAAC+GGG - chr2_1:30956081-30956100 Msa0204970:CDS 45.0%
AAGGGAGCCACTCAAGAATA+AGG + chr2_1:30956211-30956230 None:intergenic 45.0%
TCTTCTTTGTTGCCGCATGA+AGG + chr2_1:30956667-30956686 None:intergenic 45.0%
!! GAGAAGCTCTGGATAGAACT+TGG + chr2_1:30957021-30957040 None:intergenic 45.0%
TTCTTCACTCCACCTAGAAG+TGG - chr2_1:30957094-30957113 Msa0204970:CDS 45.0%
TCTTCACTCCACCTAGAAGT+GGG - chr2_1:30957095-30957114 Msa0204970:CDS 45.0%
TTGCACACTATCATCACCTC+TGG - chr2_1:30957244-30957263 Msa0204970:CDS 45.0%
TGCACACTATCATCACCTCT+GGG - chr2_1:30957245-30957264 Msa0204970:CDS 45.0%
!! TTTTGGGTCAGAATTCCCAG+AGG + chr2_1:30957263-30957282 None:intergenic 45.0%
! CTTGTTGTAGAGAGGTTGCA+GGG + chr2_1:30957303-30957322 None:intergenic 45.0%
! TCTTGTTGTAGAGAGGTTGC+AGG + chr2_1:30957304-30957323 None:intergenic 45.0%
GCAAACTTTGCCTTGCTGAT+GGG - chr2_1:30957362-30957381 Msa0204970:CDS 45.0%
AGACCAACCTGTACAAACAG+AGG + chr2_1:30957409-30957428 None:intergenic 45.0%
TAAGAGACACCGTGTGATCT+TGG + chr2_1:30957850-30957869 None:intergenic 45.0%
TGCCTTCTCACAAGTTCACA+AGG + chr2_1:30957876-30957895 None:intergenic 45.0%
ATTGCTATCGAGACTGTTGC+AGG - chr2_1:30957905-30957924 Msa0204970:intron 45.0%
!!! GCGGGTTTTGGATCAATACA+AGG + chr2_1:30958038-30958057 None:intergenic 45.0%
AACAGCAAGTAGAACTACCG+AGG + chr2_1:30958251-30958270 None:intergenic 45.0%
GGACTCACGATGTCCATTAT+GGG + chr2_1:30958396-30958415 None:intergenic 45.0%
TGGACTCACGATGTCCATTA+TGG + chr2_1:30958397-30958416 None:intergenic 45.0%
TGAGTCCAACGAATCACGAA+CGG - chr2_1:30958409-30958428 Msa0204970:CDS 45.0%
!! GGGGTGCTGATGAAAAATCA+AGG - chr2_1:30958536-30958555 Msa0204970:CDS 45.0%
AAGGTTGCTAGAAGATGCTC+GGG + chr2_1:30958607-30958626 None:intergenic 45.0%
AACTGGACAGTCTGTTCTAC+AGG - chr2_1:30958690-30958709 Msa0204970:CDS 45.0%
TCGGCAGACTTAGAAGAAGA+AGG - chr2_1:30958904-30958923 Msa0204970:CDS 45.0%
CGGCAGACTTAGAAGAAGAA+GGG - chr2_1:30958905-30958924 Msa0204970:CDS 45.0%
GGCAGACTTAGAAGAAGAAG+GGG - chr2_1:30958906-30958925 Msa0204970:CDS 45.0%
GCAGACTTAGAAGAAGAAGG+GGG - chr2_1:30958907-30958926 Msa0204970:CDS 45.0%
GAAGAAGAAGGGGGAGAAAA+TGG - chr2_1:30958916-30958935 Msa0204970:CDS 45.0%
TCCATGAGAGAACCTATGAG+GGG + chr2_1:30959048-30959067 None:intergenic 45.0%
GTTCTCTCATGGAATGCCTT+CGG - chr2_1:30959055-30959074 Msa0204970:CDS 45.0%
TTCTCTCATGGAATGCCTTC+GGG - chr2_1:30959056-30959075 Msa0204970:CDS 45.0%
AGCTAAAGCAACAGTTGCTG+AGG - chr2_1:30959182-30959201 Msa0204970:CDS 45.0%
!!! TGCAACTGATTTTGGCTTGG+AGG + chr2_1:30959214-30959233 None:intergenic 45.0%
AACAGCCCGTTCTTTGCTAA+AGG - chr2_1:30959365-30959384 Msa0204970:CDS 45.0%
CCCAAAGTCAAGTCTTTCAC+TGG - chr2_1:30959435-30959454 Msa0204970:CDS 45.0%
ATCTAGAGGTGATAAGCGCT+TGG - chr2_1:30959467-30959486 Msa0204970:CDS 45.0%
! AGCTGTCATTTGGACTCTAG+AGG + chr2_1:30959582-30959601 None:intergenic 45.0%
GCCTGAAAAGAGCTGTCATT+TGG + chr2_1:30959592-30959611 None:intergenic 45.0%
AGCAATTCAACGATGCATGC+TGG + chr2_1:30959768-30959787 None:intergenic 45.0%
AGTGTTTCGTCGTCCATCTC+CGG + chr2_1:30953353-30953372 None:intergenic 50.0%
!! GTTGTGGATTTTCGGTGTGG+TGG + chr2_1:30953415-30953434 None:intergenic 50.0%
! GTGGTTGTGGATTTTCGGTG+TGG + chr2_1:30953418-30953437 None:intergenic 50.0%
GATTGTTCGGAGAGTGGTTG+TGG + chr2_1:30953431-30953450 None:intergenic 50.0%
GAGGGTTTGGAGAGAAGAGA+GGG + chr2_1:30953453-30953472 None:intergenic 50.0%
CTAAGGGTTGGGAATGGTTG+AGG + chr2_1:30953475-30953494 None:intergenic 50.0%
GTAGAGTGGGTCTAAGGGTT+GGG + chr2_1:30953486-30953505 None:intergenic 50.0%
ATTGGAGGGATTAGGTGGGA+AGG + chr2_1:30953521-30953540 None:intergenic 50.0%
TGGTGGAGATGAGTCCATTG+CGG + chr2_1:30953549-30953568 None:intergenic 50.0%
TTGGAGAGAGGAGGAAAGAG+AGG + chr2_1:30953601-30953620 None:intergenic 50.0%
AGGAAGGAGAGAAAGGAGAG+AGG + chr2_1:30953650-30953669 None:intergenic 50.0%
!!! GAGGTTTTGAAACCGGAGCA+TGG - chr2_1:30954010-30954029 Msa0204970:CDS 50.0%
!!! GGTTTTGAAACCGGAGCATG+GGG - chr2_1:30954012-30954031 Msa0204970:CDS 50.0%
TAATGCCGAAGTCTCAGGTG+AGG - chr2_1:30954086-30954105 Msa0204970:CDS 50.0%
!! CAGGTGAGGAGTTTTGCTGT+TGG - chr2_1:30954100-30954119 Msa0204970:CDS 50.0%
GTAGGGATTCAGATGGTGTG+AGG - chr2_1:30954140-30954159 Msa0204970:CDS 50.0%
! AGATGGTGTGAGGAAAGCGT+TGG - chr2_1:30954150-30954169 Msa0204970:CDS 50.0%
TCCGTCGAATTCACCCCTAA+AGG + chr2_1:30954388-30954407 None:intergenic 50.0%
GGATGAGGAAGAAGGGAATG+TGG - chr2_1:30954405-30954424 Msa0204970:CDS 50.0%
!! GATTTGGTGTTTGGATGCGC+TGG - chr2_1:30954435-30954454 Msa0204970:CDS 50.0%
TGATGGAAATGATGCGGGTG+TGG - chr2_1:30954585-30954604 Msa0204970:intron 50.0%
GATGGAAATGATGCGGGTGT+GGG - chr2_1:30954586-30954605 Msa0204970:intron 50.0%
! GATGCTTAGGAGAAGGTGTG+TGG - chr2_1:30954627-30954646 Msa0204970:CDS 50.0%
! GAGAAGGTGTGTGGATGAGA+AGG - chr2_1:30954636-30954655 Msa0204970:CDS 50.0%
AAGGTGTGTGGATGAGAAGG+CGG - chr2_1:30954639-30954658 Msa0204970:CDS 50.0%
! GGTGCTGAAGACAATGGGAA+TGG - chr2_1:30954732-30954751 Msa0204970:intron 50.0%
CCGAAATGGTAACAACCGAG+TGG - chr2_1:30955411-30955430 Msa0204970:intron 50.0%
TACAGAATTCCTTGGGGGAC+AGG + chr2_1:30955620-30955639 None:intergenic 50.0%
! TTAAGGTGTCCGAGTCCATC+TGG - chr2_1:30955756-30955775 Msa0204970:CDS 50.0%
! ATGGTTCAGCCAGATGGACT+CGG + chr2_1:30955768-30955787 None:intergenic 50.0%
! CTTGCTATGGTTCAGCCAGA+TGG + chr2_1:30955774-30955793 None:intergenic 50.0%
!! GGGGCAGTCCACTTTTCTAT+TGG + chr2_1:30955797-30955816 None:intergenic 50.0%
AAGAAACCAAGCGCCTTGTG+GGG + chr2_1:30955816-30955835 None:intergenic 50.0%
TTCTTGAGTGGCTCCCTTGA+TGG - chr2_1:30956213-30956232 Msa0204970:intron 50.0%
TTACTTGGCCCACTTCTAGG+TGG + chr2_1:30957106-30957125 None:intergenic 50.0%
CCTTTACTTGGCCCACTTCT+AGG + chr2_1:30957109-30957128 None:intergenic 50.0%
CCTAGAAGTGGGCCAAGTAA+AGG - chr2_1:30957106-30957125 Msa0204970:CDS 50.0%
GAAGTGGGCCAAGTAAAGGT+CGG - chr2_1:30957110-30957129 Msa0204970:CDS 50.0%
CCTGACTTCCGACCTTTACT+TGG + chr2_1:30957121-30957140 None:intergenic 50.0%
CCAAGTAAAGGTCGGAAGTC+AGG - chr2_1:30957118-30957137 Msa0204970:CDS 50.0%
TATTCAAGGGTGGCTGACCA+TGG - chr2_1:30957339-30957358 Msa0204970:CDS 50.0%
ATTCAAGGGTGGCTGACCAT+GGG - chr2_1:30957340-30957359 Msa0204970:CDS 50.0%
AGCAAGGCAAAGTTTGCCCA+TGG + chr2_1:30957359-30957378 None:intergenic 50.0%
GGCAAACTTTGCCTTGCTGA+TGG - chr2_1:30957361-30957380 Msa0204970:CDS 50.0%
TTGCAAGCTTCCCATCAGCA+AGG + chr2_1:30957375-30957394 None:intergenic 50.0%
ATTGCGAAGAGCTGCAGAGT+CGG + chr2_1:30957532-30957551 None:intergenic 50.0%
GAAGCATAGAGGGACGAGTA+TGG + chr2_1:30958001-30958020 None:intergenic 50.0%
TATTGATCCAAAACCCGCGC+TGG - chr2_1:30958040-30958059 Msa0204970:intron 50.0%
ATTGATCCAAAACCCGCGCT+GGG - chr2_1:30958041-30958060 Msa0204970:intron 50.0%
TTATTCTCTCAACCCCAGCG+CGG + chr2_1:30958057-30958076 None:intergenic 50.0%
CCACTTCACGTAATCCCTCT+AGG + chr2_1:30958118-30958137 None:intergenic 50.0%
CCTAGAGGGATTACGTGAAG+TGG - chr2_1:30958115-30958134 Msa0204970:intron 50.0%
AGGGATTACGTGAAGTGGAG+AGG - chr2_1:30958120-30958139 Msa0204970:intron 50.0%
GCTAAAAGAGGAGCCTTGAC+TGG + chr2_1:30958326-30958345 None:intergenic 50.0%
AATGACTGCCGTGCCCATAA+TGG - chr2_1:30958380-30958399 Msa0204970:CDS 50.0%
CACGATGTCCATTATGGGCA+CGG + chr2_1:30958391-30958410 None:intergenic 50.0%
GCTTTCCGTTCGTGATTCGT+TGG + chr2_1:30958417-30958436 None:intergenic 50.0%
! ATTCTAGCTGCAGCTTCCGA+TGG - chr2_1:30958646-30958665 Msa0204970:CDS 50.0%
ACACACACACACACATGTGC+TGG - chr2_1:30958763-30958782 Msa0204970:CDS 50.0%
ACCAAGAACAGTCCCCTCAT+AGG - chr2_1:30959033-30959052 Msa0204970:CDS 50.0%
ACCTATGAGGGGACTGTTCT+TGG + chr2_1:30959037-30959056 None:intergenic 50.0%
TCCCCTCATAGGTTCTCTCA+TGG - chr2_1:30959044-30959063 Msa0204970:CDS 50.0%
! ACTGGTGGATGCGTATCTAG+AGG - chr2_1:30959453-30959472 Msa0204970:CDS 50.0%
!! TTTCGGTGTGGTGGGTTTCG+CGG + chr2_1:30953406-30953425 None:intergenic 55.0%
GAGAGGGATTGTTCGGAGAG+TGG + chr2_1:30953437-30953456 None:intergenic 55.0%
GGAGGGTTTGGAGAGAAGAG+AGG + chr2_1:30953454-30953473 None:intergenic 55.0%
GGGAATGGTTGAGGAGGGTT+TGG + chr2_1:30953466-30953485 None:intergenic 55.0%
GGGTTGGGAATGGTTGAGGA+GGG + chr2_1:30953471-30953490 None:intergenic 55.0%
AGGGTTGGGAATGGTTGAGG+AGG + chr2_1:30953472-30953491 None:intergenic 55.0%
GTGGGTCTAAGGGTTGGGAA+TGG + chr2_1:30953481-30953500 None:intergenic 55.0%
CGTAGAGTGGGTCTAAGGGT+TGG + chr2_1:30953487-30953506 None:intergenic 55.0%
GCGTCGTAGAGTGGGTCTAA+GGG + chr2_1:30953491-30953510 None:intergenic 55.0%
GTGAAACGGCGTCGTAGAGT+GGG + chr2_1:30953499-30953518 None:intergenic 55.0%
GGCGATTGGAGGGATTAGGT+GGG + chr2_1:30953525-30953544 None:intergenic 55.0%
TGGCGATTGGAGGGATTAGG+TGG + chr2_1:30953526-30953545 None:intergenic 55.0%
TGGAGATGAGTCCATTGCGG+TGG + chr2_1:30953546-30953565 None:intergenic 55.0%
TGAGAAGCGAGGAGAGAGTG+AGG + chr2_1:30953572-30953591 None:intergenic 55.0%
AGAGGAAGACGTGAGAAGCG+AGG + chr2_1:30953583-30953602 None:intergenic 55.0%
!! AGAGTGAAAACGGGGGCGTT+TGG + chr2_1:30953620-30953639 None:intergenic 55.0%
GGAACGGAGGAAGGAGAGAA+AGG + chr2_1:30953657-30953676 None:intergenic 55.0%
! TGAAAGCGCAACGGAGGGAA+CGG + chr2_1:30953673-30953692 None:intergenic 55.0%
ACGCTCAGCAGATTCGGAAG+CGG - chr2_1:30953720-30953739 Msa0204970:CDS 55.0%
AGCAGATTCGGAAGCGGAGA+CGG - chr2_1:30953726-30953745 Msa0204970:CDS 55.0%
! TTTGAAACCGGAGCATGGGG+AGG - chr2_1:30954015-30954034 Msa0204970:CDS 55.0%
GCCGGATAAAGCTGAGCCAA+GGG - chr2_1:30954204-30954223 Msa0204970:intron 55.0%
! GCCCTTGGCTCAGCTTTATC+CGG + chr2_1:30954208-30954227 None:intergenic 55.0%
! TAAAGCTGAGCCAAGGGCGT+TGG - chr2_1:30954210-30954229 Msa0204970:intron 55.0%
AGGGGTGAATTCGACGGATG+AGG - chr2_1:30954390-30954409 Msa0204970:CDS 55.0%
AGGAAGAAGGGAATGTGGCG+TGG - chr2_1:30954410-30954429 Msa0204970:CDS 55.0%
GGAAGAAGGGAATGTGGCGT+GGG - chr2_1:30954411-30954430 Msa0204970:CDS 55.0%
GAAGAAGGGAATGTGGCGTG+GGG - chr2_1:30954412-30954431 Msa0204970:CDS 55.0%
AAGAAGGGAATGTGGCGTGG+GGG - chr2_1:30954413-30954432 Msa0204970:CDS 55.0%
!! TGCGCTGGTGAAGCGTTGTT+CGG - chr2_1:30954450-30954469 Msa0204970:CDS 55.0%
!! AGGGCGAGCTTTGTCGACTT+TGG - chr2_1:30954492-30954511 Msa0204970:CDS 55.0%
!! AGCTTTGTCGACTTTGGCGC+AGG - chr2_1:30954498-30954517 Msa0204970:CDS 55.0%
TCGACTTTGGCGCAGGTTGT+TGG - chr2_1:30954505-30954524 Msa0204970:intron 55.0%
CGACTTTGGCGCAGGTTGTT+GGG - chr2_1:30954506-30954525 Msa0204970:intron 55.0%
GGTTAAGAGGGGAAGGTGAG+AGG - chr2_1:30955182-30955201 Msa0204970:CDS 55.0%
ATGGATATGCCTGTCCCCCA+AGG - chr2_1:30955608-30955627 Msa0204970:intron 55.0%
CAATGGGGAGGTGAGTCCTT+GGG - chr2_1:30955658-30955677 Msa0204970:CDS 55.0%
!! GAAAAGTGGACTGCCCCACA+AGG - chr2_1:30955800-30955819 Msa0204970:CDS 55.0%
GAATACTCGGTCACTAGCCC+AGG + chr2_1:30956002-30956021 None:intergenic 55.0%
TTGATCCAAAACCCGCGCTG+GGG - chr2_1:30958042-30958061 Msa0204970:intron 55.0%
TATTCTCTCAACCCCAGCGC+GGG + chr2_1:30958056-30958075 None:intergenic 55.0%
CACTCGCGTGTCATCTGAGT+CGG - chr2_1:30958885-30958904 Msa0204970:CDS 55.0%
ATGCCTTCGGGTCCTTCTCA+AGG - chr2_1:30959068-30959087 Msa0204970:CDS 55.0%
AGTCCTTGAGAAGGACCCGA+AGG + chr2_1:30959074-30959093 None:intergenic 55.0%
!! GGACTCTAGAGGCACCTAGA+AGG + chr2_1:30959571-30959590 None:intergenic 55.0%
ATGCGTTCACAAGGGTCGTG+CGG - chr2_1:30959726-30959745 Msa0204970:five_prime_UTR 55.0%
GTTTCGTCGTCCATCTCCGG+TGG + chr2_1:30953350-30953369 None:intergenic 60.0%
GGCGTCGTAGAGTGGGTCTA+AGG + chr2_1:30953492-30953511 None:intergenic 60.0%
GGTGAAACGGCGTCGTAGAG+TGG + chr2_1:30953500-30953519 None:intergenic 60.0%
CGGTGGCGATTGGAGGGATT+AGG + chr2_1:30953529-30953548 None:intergenic 60.0%
CCATTGCGGTGGCGATTGGA+GGG + chr2_1:30953535-30953554 None:intergenic 60.0%
TCCATTGCGGTGGCGATTGG+AGG + chr2_1:30953536-30953555 None:intergenic 60.0%
GAGTCCATTGCGGTGGCGAT+TGG + chr2_1:30953539-30953558 None:intergenic 60.0%
GAAGCGAGGAGAGAGTGAGG+TGG + chr2_1:30953569-30953588 None:intergenic 60.0%
!! AAACGGGGGCGTTTGGAGAG+AGG + chr2_1:30953613-30953632 None:intergenic 60.0%
ACCGGAGCATGGGGAGGTTT+CGG - chr2_1:30954021-30954040 Msa0204970:CDS 60.0%
TCCGAAACCTCCCCATGCTC+CGG + chr2_1:30954025-30954044 None:intergenic 60.0%
GGTTTCGGAGACAGCTGCTG+AGG - chr2_1:30954036-30954055 Msa0204970:CDS 60.0%
CGCCGGATAAAGCTGAGCCA+AGG - chr2_1:30954203-30954222 Msa0204970:intron 60.0%
AAATCCACCGCCAACGCCCT+TGG + chr2_1:30954223-30954242 None:intergenic 60.0%
GGAATGTGGCGTGGGGGATT+TGG - chr2_1:30954419-30954438 Msa0204970:CDS 60.0%
!! GGCGTGGGGGATTTGGTGTT+TGG - chr2_1:30954426-30954445 Msa0204970:CDS 60.0%
GGAAATGATGCGGGTGTGGG+AGG - chr2_1:30954589-30954608 Msa0204970:intron 60.0%
TGATGCGGGTGTGGGAGGAA+AGG - chr2_1:30954594-30954613 Msa0204970:intron 60.0%
GATGCGGGTGTGGGAGGAAA+GGG - chr2_1:30954595-30954614 Msa0204970:intron 60.0%
AGCTGCTGCCTCTCTTTCCG+AGG - chr2_1:30954789-30954808 Msa0204970:intron 60.0%
GCAATGGGGAGGTGAGTCCT+TGG - chr2_1:30955657-30955676 Msa0204970:CDS 60.0%
CGACTCAGATGACACGCGAG+TGG + chr2_1:30958887-30958906 None:intergenic 60.0%
GCACGACCCTTGTGAACGCA+TGG + chr2_1:30959727-30959746 None:intergenic 60.0%
ACAGACCGGAGTAGCGCCAC+CGG - chr2_1:30953331-30953350 Msa0204970:three_prime_UTR 65.0%
CATCTCCGGTGGCGCTACTC+CGG + chr2_1:30953339-30953358 None:intergenic 65.0%
!! GTGGTGGGTTTCGCGGAGGT+CGG + chr2_1:30953399-30953418 None:intergenic 65.0%
CCCTCCAATCGCCACCGCAA+TGG - chr2_1:30953532-30953551 Msa0204970:CDS 65.0%
GCGAGGAGAGAGTGAGGTGG+TGG + chr2_1:30953566-30953585 None:intergenic 65.0%
GCAACGGAGGGAACGGAGGA+AGG + chr2_1:30953666-30953685 None:intergenic 65.0%
AAGCGCAACGGAGGGAACGG+AGG + chr2_1:30953670-30953689 None:intergenic 65.0%
!! AGCTGAGCCAAGGGCGTTGG+CGG - chr2_1:30954213-30954232 Msa0204970:intron 65.0%
! CTCAACCCCAGCGCGGGTTT+TGG + chr2_1:30958050-30958069 None:intergenic 65.0%
CGGAGTAGCGCCACCGGAGA+TGG - chr2_1:30953337-30953356 Msa0204970:three_prime_UTR 70.0%
!! CGGTGTGGTGGGTTTCGCGG+AGG + chr2_1:30953403-30953422 None:intergenic 70.0%
!! CGGGGGCGTTTGGAGAGAGG+AGG + chr2_1:30953610-30953629 None:intergenic 70.0%
!! TGAGCCAAGGGCGTTGGCGG+TGG - chr2_1:30954216-30954235 Msa0204970:intron 70.0%
! GGACTGCCCCACAAGGCGCT+TGG - chr2_1:30955807-30955826 Msa0204970:CDS 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 30953242 30959818 30953242 ID=Msa0204970;Name=Msa0204970
chr2_1 mRNA 30953242 30959818 30953242 ID=Msa0204970-mRNA-1;Parent=Msa0204970;Name=Msa0204970-mRNA-1;_AED=0.06;_eAED=0.06;_QI=114|1|1|1|1|1|9|273|1330
chr2_1 exon 30953242 30954219 30953242 ID=Msa0204970-mRNA-1:exon:10965;Parent=Msa0204970-mRNA-1
chr2_1 exon 30954349 30954523 30954349 ID=Msa0204970-mRNA-1:exon:10964;Parent=Msa0204970-mRNA-1
chr2_1 exon 30954607 30954733 30954607 ID=Msa0204970-mRNA-1:exon:10963;Parent=Msa0204970-mRNA-1
chr2_1 exon 30954826 30954940 30954826 ID=Msa0204970-mRNA-1:exon:10962;Parent=Msa0204970-mRNA-1
chr2_1 exon 30955134 30955221 30955134 ID=Msa0204970-mRNA-1:exon:10961;Parent=Msa0204970-mRNA-1
chr2_1 exon 30955453 30955544 30955453 ID=Msa0204970-mRNA-1:exon:10960;Parent=Msa0204970-mRNA-1
chr2_1 exon 30955640 30956134 30955640 ID=Msa0204970-mRNA-1:exon:10959;Parent=Msa0204970-mRNA-1
chr2_1 exon 30956928 30957668 30956928 ID=Msa0204970-mRNA-1:exon:10958;Parent=Msa0204970-mRNA-1
chr2_1 exon 30958250 30959818 30958250 ID=Msa0204970-mRNA-1:exon:10957;Parent=Msa0204970-mRNA-1
chr2_1 five_prime_UTR 30959705 30959818 30959705 ID=Msa0204970-mRNA-1:five_prime_utr;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30958250 30959704 30958250 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30956928 30957668 30956928 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30955640 30956134 30955640 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30955453 30955544 30955453 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30955134 30955221 30955134 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30954826 30954940 30954826 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30954607 30954733 30954607 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30954349 30954523 30954349 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 CDS 30953515 30954219 30953515 ID=Msa0204970-mRNA-1:cds;Parent=Msa0204970-mRNA-1
chr2_1 three_prime_UTR 30953242 30953514 30953242 ID=Msa0204970-mRNA-1:three_prime_utr;Parent=Msa0204970-mRNA-1
Gene Sequence

>Msa0204970

ATGGACGACGAAACACTCTCCCGCATCGTAACAGAAATCTCCGACCTCCGCGAAACCCACCACACCGAAAATCCACAACCACTCTCCGAACAATCCCTCTCTTCTCTCCAAACCCTCCTCAACCATTCCCAACCCTTAGACCCACTCTACGACGCCGTTTCACCTTCCCACCTAATCCCTCCAATCGCCACCGCAATGGACTCATCTCCACCACCTCACTCTCTCCTCGCTTCTCACGTCTTCCTCTCTTTCCTCCTCTCTCCAAACGCCCCCGTTTTCACTCTCTTCACTCCTCTCTCCTTTCTCTCCTTCCTCCGTTCCCTCCGTTGCGCTTTCAAAAACACTAACCCAAACCCTAATAACAACGCTCAGCAGATTCGGAAGCGGAGACGGAACTCCAAAAACAAGAAAAATGTTCAAAATGACGATGATGAACCTAATTCGCCAAATTCTGTACAGAAAGTTGATGTTAGGGTTTTGATTTCGCTATTTGAGAAATTAGTTAATGTTATGGGTTTAATTCATCTTGATCGGTTTCCCGAGAGTTTGAAATCGTTGATTCAAACGATTTCTGAAGTTCCGTTGACTGCGATTGAATTGTGTAATGAGGTTCAGTATGGTAGATTGGTTGGTTTGTGTTCAAAGATTTTGAAAGAGGTTTTGAAACCGGAGCATGGGGAGGTTTCGGAGACAGCTGCTGAGGTTTTAAAGGCGATTTCGCCTTTTGTTGTAATGCCGAAGTCTCAGGTGAGGAGTTTTGCTGTTGGTTTTGTTATTAGTTTGAGTAGGGATTCAGATGGTGTGAGGAAAGCGTTGGTTAATTTTCCGAGGTATTTGGCAAATAAGGCGCCGGATAAAGCTGAGCCAAGGGCGTTGGCGGTGGATTTTATAATGGAGGTTGTTAGGGTTATGGAAGTGGGGGATCAGATTGAGTTTGTGAAGTATGTTGTGAAAATGAGTCAAGGGAAAACCAATTTAAGGCTTTTGGCGGTTGATCTTATTTTGAATCTTGTGACATTGTTGAAGGATCCTTTAGGGGTGAATTCGACGGATGAGGAAGAAGGGAATGTGGCGTGGGGGATTTGGTGTTTGGATGCGCTGGTGAAGCGTTGTTCGGATGTTAGTGCTACGATTCGAGGGCGAGCTTTGTCGACTTTGGCGCAGGTTGTTGGGTTTTTATCAGGTAGTGAAAAGGCTAGTGTGGTTTTGAAAGAGTTTATGGGTTTTGGTGATGGAAATGATGCGGGTGTGGGAGGAAAGGGAATCAATGAGATGCTTAGGAGAAGGTGTGTGGATGAGAAGGCGGTTGTGAGAAAAGCAGCTCTTTTGTTTGTTACTAACTTGACTGCTCTACTTGGAGGTGCTATTGATGAAGTGGTGCTGAAGACAATGGGAATGGCTTGTTCCGATTCACTTCTTAGCATTCGTAAAGCAGCTGCTGCCTCTCTTTCCGAGGCTTTCAGAACATTCTCAGCCGAAATGGTAACAACCGAGTGGCTACATTCAGTTCCTCGTCAAATAGCTGATAATGAAACTAGCATCCAAGAAGAATGTGAGAACTTGTTTCAAGAACTTGTTTTGGACCGAATATCTAGAACTGCAGCTGCCACCTCTTCATATATCGAACCTGCCTCTAGTATTAAAAAGAAAGGGAAAGGTTTAGACAACGAAATGGATATGCCTGTCCCCCAAGGAATTCTGTATCTCCTTAGAGAGATTTGCAATGGGGAGGTGAGTCCTTGGGTGAAAAAAATTTGCACAAACCTGGGCAAAAAGAAACGGTTGAATCACAAAATTGTTACGGCACTTCAGAATATAATTAAGGTGTCCGAGTCCATCTGGCTGAACCATAGCAAGCCAATAGAAAAGTGGACTGCCCCACAAGGCGCTTGGTTTCTTTTATCAGAGGTGTCAGTATTTCTTCCAAAAGCAGTGGACTGGGAATTTCTTCATCATCATTGGCAGCTTCTTGACAAGCATAAAGTGAAAGGCGAGTTTAGAAGTCCAGTTGTACAAATAAATGCATTTGAGGGCGACGAAAGCATAGAATGCAATAATGTTGCCTGGGCTAGTGACCGAGTATTCCTCTTGCAAACAATCTCTAATGTTTCTGTCGAGCTGCCAACTGATCCTGCTGCTGATTTGGCTCATAACTTGCTCAAACGGGTTGAAAAATTCAACATGCATGCAACAGAGGTTGATGCTCATGTAAAAGCACTTAAAACATTGTGCAAGCGAAAAGCTTCAGATGCAGCAACAGAAGAAGCAATAGTCTTGAAATGGGTACACCAAGTTCTATCCAGAGCTTCTCAAATAATAGAAACTTTTATTGCAGATAATTCAGAGAAAAATGCAGAAACTGACTTCTTCACTCCACCTAGAAGTGGGCCAAGTAAAGGTCGGAAGTCAGGAAGAAAGCGCAAGTCATTGTCAAAAGCAATTACAGCTATTTATACAATTGGGTCTTTAATTATTGTTTGCCCATCTGCTGATATGAGTGCTATAATTCCATTATTGCACACTATCATCACCTCTGGGAATTCTGACCCAAAATTAAATAAGCTACTCGGCCCTGCAACCTCTCTACAACAAGAATCTCCTTCTTTTTATATTCAAGGGTGGCTGACCATGGGCAAACTTTGCCTTGCTGATGGGAAGCTTGCAAAGAACTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGGCCGACTCTGCAGCTCTTCGCAATAATATTGTGGTCACAATGGCAGACTTTTGTGTTCGGTACACTGCTCTTATTGATTGTTACATAACCAAGATCACACGGTGTCTCTTAGATCCTTGTGAACTTGTGAGAAGGCAAACATTCATATTGCTATCGAGACTGTTGCAGAGGGATTACGTGAAGTGGAGAGGTGTTCTATTTCTTCGTTTCCTTTTGTCACTTGTTGATGAATCAGAAAAGATTAGGCAGTTAGCAGATTTTCTCTTTGGAAATATTTTGAAAGTCAAGGCTCCTCTTTTAGCATATAATAGTTTTGTTGAGGCTGTTTTTGTTTTGAATGACTGCCGTGCCCATAATGGACATCGTGAGTCCAACGAATCACGAACGGAAAGCCAACTTTTTTCGATCAGGGGTGCTGATGAAAAATCAAGGTCTAGAAGAATGCACATTTATGTTTCTCTACTAAAGCAAATGGCTCCCGAGCATCTTCTAGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCCGATGGTATGCTCAATATTGAAGATGCAACTGGACAGTCTGTTCTACAGGATACTTTTCAAATTCTTGGCTGTAAAGAGATACGCATTCAATCCACTCGCGTGTCATCTGAGTCGGCAGACTTAGAAGAAGAAGGGGGAGAAAATGGATCTTCAACTAGAAAGGCTATAACTCAGGCAGTCAAGAAGGGCCTCATTCAAAACACTATACCCATCTTCATAGAGTTGAAACGTCTATTGGAAACCAAGAACAGTCCCCTCATAGGTTCTCTCATGGAATGCCTTCGGGTCCTTCTCAAGGACTACAAGAATGAGATTGATGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTTATCTATGACATGCAGAAATATGAAGCTGCAAAAGCTAAAGCAACAGTTGCTGAGGCTGTAACCTCCAAGCCAAAATCAGTTGCAAATCAATCACCTGATGTTTCTAAGAATCTGGCAAAGGAACAAGAACAAACACATGAACAAAATGAGGACAGTGACAAGCCCCCAAGTGATTCAAAAATTGCTTCAGCAAGGGCAGATGCTGCAGCTGCAGCAACAGCCCGTTCTTTGCTAAAGGAAATTAACAAGGGGACATCAACACCACAACTTAGTTCTTTGAACGTTCCCAAAGTCAAGTCTTTCACTGGTGGATGCGTATCTAGAGGTGATAAGCGCTTGGATGTCTTAAAATCTGTGCAGAAAAAACATTCTTTTGATTCTGATGAAGAGAACTAA
Protein sequence

>Msa0204970

MDDETLSRIVTEISDLRETHHTENPQPLSEQSLSSLQTLLNHSQPLDPLYDAVSPSHLIPPIATAMDSSPPPHSLLASHVFLSFLLSPNAPVFTLFTPLSFLSFLRSLRCAFKNTNPNPNNNAQQIRKRRRNSKNKKNVQNDDDEPNSPNSVQKVDVRVLISLFEKLVNVMGLIHLDRFPESLKSLIQTISEVPLTAIELCNEVQYGRLVGLCSKILKEVLKPEHGEVSETAAEVLKAISPFVVMPKSQVRSFAVGFVISLSRDSDGVRKALVNFPRYLANKAPDKAEPRALAVDFIMEVVRVMEVGDQIEFVKYVVKMSQGKTNLRLLAVDLILNLVTLLKDPLGVNSTDEEEGNVAWGIWCLDALVKRCSDVSATIRGRALSTLAQVVGFLSGSEKASVVLKEFMGFGDGNDAGVGGKGINEMLRRRCVDEKAVVRKAALLFVTNLTALLGGAIDEVVLKTMGMACSDSLLSIRKAAAASLSEAFRTFSAEMVTTEWLHSVPRQIADNETSIQEECENLFQELVLDRISRTAAATSSYIEPASSIKKKGKGLDNEMDMPVPQGILYLLREICNGEVSPWVKKICTNLGKKKRLNHKIVTALQNIIKVSESIWLNHSKPIEKWTAPQGAWFLLSEVSVFLPKAVDWEFLHHHWQLLDKHKVKGEFRSPVVQINAFEGDESIECNNVAWASDRVFLLQTISNVSVELPTDPAADLAHNLLKRVEKFNMHATEVDAHVKALKTLCKRKASDAATEEAIVLKWVHQVLSRASQIIETFIADNSEKNAETDFFTPPRSGPSKGRKSGRKRKSLSKAITAIYTIGSLIIVCPSADMSAIIPLLHTIITSGNSDPKLNKLLGPATSLQQESPSFYIQGWLTMGKLCLADGKLAKNYIPLFVQELEKADSAALRNNIVVTMADFCVRYTALIDCYITKITRCLLDPCELVRRQTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKAPLLAYNSFVEAVFVLNDCRAHNGHRESNESRTESQLFSIRGADEKSRSRRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATGQSVLQDTFQILGCKEIRIQSTRVSSESADLEEEGGENGSSTRKAITQAVKKGLIQNTIPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADKQLQKELIYDMQKYEAAKAKATVAEAVTSKPKSVANQSPDVSKNLAKEQEQTHEQNEDSDKPPSDSKIASARADAAAAATARSLLKEINKGTSTPQLSSLNVPKVKSFTGGCVSRGDKRLDVLKSVQKKHSFDSDEEN*