Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392570 | XP_003598058.2 | 92.766 | 705 | 36 | 5 | 1 | 694 | 1 | 701 | 0.0 | 1306 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392570 | sp|Q9FQ19|SCC13_ARATH | 36.694 | 496 | 226 | 17 | 1 | 454 | 1 | 450 | 6.32e-66 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392570 | G7J066 | 92.766 | 705 | 36 | 5 | 1 | 694 | 1 | 701 | 0.0 | 1306 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0392570 | 0.812946 | 3.281567e-51 | -8.615850e-47 |
| Msa0050530 | Msa0392570 | 0.807195 | 5.690810e-50 | -8.615850e-47 |
| Msa0091350 | Msa0392570 | 0.806062 | 9.870570e-50 | -8.615850e-47 |
| Msa0094180 | Msa0392570 | 0.822039 | 2.931664e-53 | -8.615850e-47 |
| Msa0109730 | Msa0392570 | 0.802044 | 6.762921e-49 | -8.615850e-47 |
| Msa0125590 | Msa0392570 | 0.807521 | 4.853504e-50 | -8.615850e-47 |
| Msa0153210 | Msa0392570 | 0.803407 | 3.538681e-49 | -8.615850e-47 |
| Msa0158900 | Msa0392570 | 0.808474 | 3.043054e-50 | -8.615850e-47 |
| Msa0165830 | Msa0392570 | 0.804765 | 1.846279e-49 | -8.615850e-47 |
| Msa0184700 | Msa0392570 | 0.801144 | 1.034086e-48 | -8.615850e-47 |
| Msa0204970 | Msa0392570 | 0.827920 | 1.198261e-54 | -8.615850e-47 |
| Msa0225800 | Msa0392570 | 0.843885 | 1.064101e-58 | -8.615850e-47 |
| Msa0373170 | Msa0392570 | 0.831410 | 1.696119e-55 | -8.615850e-47 |
| Msa0382230 | Msa0392570 | 0.806427 | 8.270231e-50 | -8.615850e-47 |
| Msa0392570 | Msa0421750 | 0.815830 | 7.561671e-52 | -8.615850e-47 |
| Msa0392570 | Msa0466520 | 0.802874 | 4.561077e-49 | -8.615850e-47 |
| Msa0392570 | Msa0467690 | 0.834924 | 2.261784e-56 | -8.615850e-47 |
| Msa0392570 | Msa0470150 | 0.918648 | 1.202276e-86 | -8.615850e-47 |
| Msa0392570 | Msa0487950 | 0.807459 | 5.003967e-50 | -8.615850e-47 |
| Msa0392570 | Msa0506880 | 0.800105 | 1.684983e-48 | -8.615850e-47 |
| Msa0392570 | Msa0507810 | 0.815167 | 1.062272e-51 | -8.615850e-47 |
| Msa0392570 | Msa0507820 | 0.810900 | 9.158502e-51 | -8.615850e-47 |
| Msa0392570 | Msa0514020 | 0.833467 | 5.243757e-56 | -8.615850e-47 |
| Msa0392570 | Msa0520680 | 0.819323 | 1.233672e-52 | -8.615850e-47 |
| Msa0392570 | Msa0527850 | 0.823079 | 1.679926e-53 | -8.615850e-47 |
| Msa0392570 | Msa0544410 | 0.807275 | 5.474332e-50 | -8.615850e-47 |
| Msa0392570 | Msa0554300 | 0.813793 | 2.138421e-51 | -8.615850e-47 |
| Msa0392570 | Msa0572830 | 0.808125 | 3.611416e-50 | -8.615850e-47 |
| Msa0392570 | Msa0582460 | 0.819218 | 1.303528e-52 | -8.615850e-47 |
| Msa0392570 | Msa0586200 | 0.811337 | 7.362618e-51 | -8.615850e-47 |
| Msa0392570 | Msa0640800 | 0.816799 | 4.588992e-52 | -8.615850e-47 |
| Msa0392570 | Msa0648760 | 0.809853 | 1.540871e-50 | -8.615850e-47 |
| Msa0392570 | Msa0663290 | 0.816513 | 5.320255e-52 | -8.615850e-47 |
| Msa0392570 | Msa0664070 | 0.806819 | 6.833666e-50 | -8.615850e-47 |
| Msa0392570 | Msa0690320 | 0.804513 | 2.083346e-49 | -8.615850e-47 |
| Msa0392570 | Msa0717900 | 0.802599 | 5.198306e-49 | -8.615850e-47 |
| Msa0392570 | Msa0816080 | 0.816294 | 5.954337e-52 | -8.615850e-47 |
| Msa0392570 | Msa0900090 | 0.818662 | 1.743538e-52 | -8.615850e-47 |
| Msa0392570 | Msa1000780 | 0.805138 | 1.542583e-49 | -8.615850e-47 |
| Msa0392570 | Msa1008850 | 0.803492 | 3.397318e-49 | -8.615850e-47 |
| Msa0392570 | Msa1071410 | 0.801452 | 8.943939e-49 | -8.615850e-47 |
| Msa0392570 | Msa1078860 | 0.813085 | 3.059020e-51 | -8.615850e-47 |
| Msa0392570 | Msa1078990 | 0.827754 | 1.313693e-54 | -8.615850e-47 |
| Msa0392570 | Msa1106220 | 0.811412 | 7.091196e-51 | -8.615850e-47 |
| Msa0392570 | Msa1119380 | 0.834487 | 2.913912e-56 | -8.615850e-47 |
| Msa0392570 | Msa1166820 | 0.835825 | 1.338880e-56 | -8.615850e-47 |
| Msa0392570 | Msa1169170 | 0.819559 | 1.089637e-52 | -8.615850e-47 |
| Msa0392570 | Msa1169690 | 0.807876 | 4.080593e-50 | -8.615850e-47 |
| Msa0392570 | Msa1191000 | 0.802852 | 4.608899e-49 | -8.615850e-47 |
| Msa0392570 | Msa1244690 | 0.814136 | 1.796449e-51 | -8.615850e-47 |
| Msa0392570 | Msa1254420 | 0.812185 | 4.815411e-51 | -8.615850e-47 |
| Msa0392570 | Msa1294790 | 0.814173 | 1.763168e-51 | -8.615850e-47 |
| Msa0392570 | Msa1381800 | 0.803182 | 3.939098e-49 | -8.615850e-47 |
| Msa0392570 | Msa1390210 | 0.806202 | 9.224920e-50 | -8.615850e-47 |
| Msa0392570 | Msa1432060 | 0.843042 | 1.787223e-58 | -8.615850e-47 |
| Msa0392570 | Msa1435100 | 0.806060 | 9.883264e-50 | -8.615850e-47 |
| Msa0392570 | Msa1439730 | 0.802331 | 5.900799e-49 | -8.615850e-47 |
| Msa0249870 | Msa0392570 | 0.815478 | 9.058793e-52 | -8.615850e-47 |
| Msa0260570 | Msa0392570 | 0.827203 | 1.780957e-54 | -8.615850e-47 |
| Msa0260630 | Msa0392570 | 0.838654 | 2.529308e-57 | -8.615850e-47 |
| Msa0281540 | Msa0392570 | 0.837790 | 4.223034e-57 | -8.615850e-47 |
| Msa0320580 | Msa0392570 | 0.823237 | 1.542869e-53 | -8.615850e-47 |
| Msa0342220 | Msa0392570 | 0.808099 | 3.658065e-50 | -8.615850e-47 |
| Msa0344110 | Msa0392570 | 0.825332 | 4.965888e-54 | -8.615850e-47 |
| Msa0346690 | Msa0392570 | 0.809457 | 1.874270e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392570 | MtrunA17_Chr3g0077681 | 92.766 | 705 | 36 | 5 | 1 | 694 | 1 | 701 | 0.0 | 1306 |
| Msa0392570 | MtrunA17_Chr7g0249681 | 49.080 | 163 | 81 | 2 | 1 | 162 | 1 | 162 | 1.74e-37 | 150 |
| Msa0392570 | MtrunA17_Chr7g0226281 | 38.732 | 142 | 76 | 4 | 9 | 146 | 4 | 138 | 2.12e-18 | 89.7 |
| Msa0392570 | MtrunA17_Chr7g0226281 | 38.182 | 110 | 61 | 3 | 583 | 691 | 666 | 769 | 1.52e-11 | 67.8 |
| Msa0392570 | MtrunA17_Chr3g0087321 | 46.512 | 86 | 43 | 1 | 43 | 125 | 14 | 99 | 1.12e-17 | 79.0 |
| Msa0392570 | MtrunA17_Chr5g0437491 | 33.913 | 115 | 73 | 1 | 1 | 112 | 1 | 115 | 3.57e-17 | 81.3 |
| Msa0392570 | MtrunA17_Chr5g0436101 | 33.621 | 116 | 74 | 1 | 1 | 113 | 1 | 116 | 1.79e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392570 | AT3G59550.1 | 36.694 | 496 | 226 | 17 | 1 | 454 | 1 | 450 | 6.42e-67 | 233 |
| Msa0392570 | AT5G16270.1 | 49.080 | 163 | 81 | 2 | 1 | 162 | 1 | 162 | 2.65e-38 | 153 |
| Msa0392570 | AT5G16270.1 | 47.500 | 80 | 40 | 1 | 613 | 692 | 952 | 1029 | 9.13e-11 | 65.9 |
| Msa0392570 | AT5G40840.4 | 40.237 | 169 | 87 | 5 | 1 | 161 | 1 | 163 | 1.09e-26 | 116 |
| Msa0392570 | AT5G40840.2 | 40.237 | 169 | 87 | 5 | 1 | 161 | 1 | 163 | 1.69e-26 | 116 |
| Msa0392570 | AT5G40840.1 | 40.237 | 169 | 87 | 5 | 1 | 161 | 1 | 163 | 1.77e-26 | 115 |
| Msa0392570 | AT5G05490.2 | 33.884 | 121 | 77 | 1 | 1 | 118 | 1 | 121 | 7.39e-16 | 82.0 |
| Msa0392570 | AT5G05490.1 | 32.759 | 116 | 75 | 1 | 6 | 118 | 16 | 131 | 1.58e-13 | 74.3 |
Find 204 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCCGGTGCATCTGTTAT+TGG | 0.224978 | 3_2:+5787273 | None:intergenic |
| GGCTCATCAACAACGATTTC+AGG | 0.226741 | 3_2:+5787294 | None:intergenic |
| TAGGATGTTCTTTGAAGTTT+TGG | 0.239810 | 3_2:-5786037 | Msa0392570:intron |
| ATTTCAGGTGCATCAGTTAT+TGG | 0.240679 | 3_2:+5787309 | None:intergenic |
| CTAAGAGATGGTTCAGAAAT+TGG | 0.243750 | 3_2:+5788006 | None:intergenic |
| ATTTCAGGTGCATCAGTTAT+TGG | 0.256541 | 3_2:+5787345 | None:intergenic |
| ACTGAAGAGCAAAAGGTTTA+AGG | 0.266284 | 3_2:-5787608 | Msa0392570:CDS |
| CCTGTCCTTGCTCCATTTGA+TGG | 0.272790 | 3_2:+5787920 | None:intergenic |
| GTGGTCTAGCTGGTTGAGTT+GGG | 0.275763 | 3_2:+5788159 | None:intergenic |
| TGGTAGTATGTGACTCTATA+TGG | 0.278279 | 3_2:+5788375 | None:intergenic |
| CCCTGTCCTTGCTCCATTTG+AGG | 0.279733 | 3_2:+5787889 | None:intergenic |
| GGCTCGTCAACAGCAATTTC+AGG | 0.282832 | 3_2:+5787330 | None:intergenic |
| CTGGGGTTCCCATTGCATTA+AGG | 0.284115 | 3_2:-5789248 | Msa0392570:CDS |
| TTTGACCAGCCTTTATTTAC+AGG | 0.284947 | 3_2:-5787577 | Msa0392570:intron |
| GTATGTTGCGAGTATCATTA+AGG | 0.309719 | 3_2:+5787671 | None:intergenic |
| TTTGGTCTTGCATCAGAATC+TGG | 0.310278 | 3_2:+5788560 | None:intergenic |
| TCGTCAGCAACTTGATTAAT+TGG | 0.312082 | 3_2:+5787369 | None:intergenic |
| TGGATCTCAGGAATCATTTC+AGG | 0.317785 | 3_2:+5788194 | None:intergenic |
| TAGCCATCATCATATCTTTC+AGG | 0.318226 | 3_2:-5788336 | Msa0392570:CDS |
| TTACCTATTTGGTAACACTA+TGG | 0.321043 | 3_2:+5787807 | None:intergenic |
| GTAAAATACACATTTCTAAA+GGG | 0.327633 | 3_2:+5785626 | None:intergenic |
| GTCGCAACACCTCCTTTATT+AGG | 0.328789 | 3_2:+5787156 | None:intergenic |
| ACATAATTATCCACTATAAT+AGG | 0.329035 | 3_2:+5788734 | None:intergenic |
| AGAAGTATTGATACATTGTC+TGG | 0.334456 | 3_2:-5786401 | Msa0392570:CDS |
| CAAGATGAGATTACTCTTGC+AGG | 0.335666 | 3_2:-5788852 | Msa0392570:intron |
| TTACCTTAAGAGTAAATTAG+AGG | 0.341041 | 3_2:-5785607 | Msa0392570:three_prime_UTR |
| TTTCTCTTCCTTACTCTTTG+AGG | 0.341054 | 3_2:+5787847 | None:intergenic |
| TACCCTTGTCGGTGGAGATT+GGG | 0.342711 | 3_2:+5788427 | None:intergenic |
| TTTCAGCTTGAACAAGATCT+TGG | 0.350159 | 3_2:-5786085 | Msa0392570:CDS |
| GCGAAAGGACGTCACTGCTT+TGG | 0.352534 | 3_2:-5787641 | Msa0392570:CDS |
| GCAAGGACAGGGTCAGGATC+AGG | 0.353115 | 3_2:-5787878 | Msa0392570:CDS |
| CGAAAGGACGTCACTGCTTT+GGG | 0.353338 | 3_2:-5787640 | Msa0392570:CDS |
| AAAGCTTACTCTTCCTCATT+TGG | 0.357256 | 3_2:+5788542 | None:intergenic |
| TGAAAATATTCCAACAGATA+TGG | 0.360614 | 3_2:-5788252 | Msa0392570:CDS |
| CAATTTCTGAACCATCTCTT+AGG | 0.361011 | 3_2:-5788005 | Msa0392570:CDS |
| TAACCTCTAATTTACTCTTA+AGG | 0.361180 | 3_2:+5785604 | None:intergenic |
| GTTTCTTTCAGAGCATATAA+TGG | 0.371261 | 3_2:-5789274 | Msa0392570:intron |
| CGAGCTCATGCATCAGAAAC+TGG | 0.372324 | 3_2:-5787081 | Msa0392570:CDS |
| TAGTCCCTGATGTAAATTAG+AGG | 0.375577 | 3_2:-5785654 | Msa0392570:three_prime_UTR |
| CCTTGCTCCATTTGAGGAAC+AGG | 0.376880 | 3_2:+5787895 | None:intergenic |
| ACCCCATAGTGTTACCAAAT+AGG | 0.380002 | 3_2:-5787810 | Msa0392570:intron |
| CTACCCTTGTCGGTGGAGAT+TGG | 0.384833 | 3_2:+5788426 | None:intergenic |
| ATGTCGGCTCACCTACTCTT+AGG | 0.390118 | 3_2:-5789225 | Msa0392570:CDS |
| ATTTACATCAGGGACTAAAC+TGG | 0.396765 | 3_2:+5785660 | None:intergenic |
| AGTGGTCTAGCTGGTTGAGT+TGG | 0.397191 | 3_2:+5788158 | None:intergenic |
| AATCAATTTATCAGTTCTGC+TGG | 0.398938 | 3_2:-5787003 | Msa0392570:CDS |
| GAACAGCTACCTGTAAATAA+AGG | 0.399524 | 3_2:+5787568 | None:intergenic |
| GAGGGATCGCGAAGAGCTTC+CGG | 0.400091 | 3_2:+5788287 | None:intergenic |
| TCAGTGTCTTTGCTTTGAGT+TGG | 0.403840 | 3_2:+5787207 | None:intergenic |
| AAATCTTCAGCAGGTTGCTC+TGG | 0.405352 | 3_2:+5786105 | None:intergenic |
| GGTAAAATACACATTTCTAA+AGG | 0.410067 | 3_2:+5785625 | None:intergenic |
| AGATAATCCCAAGTGCTTAC+AGG | 0.417460 | 3_2:-5787182 | Msa0392570:CDS |
| AAACTTGAGGAGAAATCATA+AGG | 0.420722 | 3_2:+5785509 | None:intergenic |
| TTGTTATATTGCAGGACCTC+TGG | 0.425634 | 3_2:-5786602 | Msa0392570:intron |
| GTTAACCTCTAATTTACATC+AGG | 0.427592 | 3_2:+5785649 | None:intergenic |
| CAGTGTCTTTGCTTTGAGTT+GGG | 0.431920 | 3_2:+5787208 | None:intergenic |
| CTATGTCCCTGCTCCATTTG+AGG | 0.437212 | 3_2:+5787949 | None:intergenic |
| TGGTCTAGCTGGTTGAGTTG+GGG | 0.437964 | 3_2:+5788160 | None:intergenic |
| GGCTATGAAATAGATATTAA+CGG | 0.439404 | 3_2:-5789021 | Msa0392570:CDS |
| GGGGTTTCAGCATGGATCTC+AGG | 0.440280 | 3_2:+5788182 | None:intergenic |
| TACCTATTTGGTAACACTAT+GGG | 0.440577 | 3_2:+5787808 | None:intergenic |
| ACAGGGTCCTGTTCCTCAAA+TGG | 0.443666 | 3_2:-5787902 | Msa0392570:CDS |
| TGAGAAGCATCTGGAGTTAG+TGG | 0.447149 | 3_2:+5788140 | None:intergenic |
| CGACAAAACTGTTCATGAAA+AGG | 0.448116 | 3_2:-5788225 | Msa0392570:CDS |
| TATGTTGCGAGTATCATTAA+GGG | 0.449065 | 3_2:+5787672 | None:intergenic |
| TCTCATGGTGGCGCCTCAGA+TGG | 0.456879 | 3_2:-5788122 | Msa0392570:CDS |
| TCCTCAAATGGAGCAAGGAC+AGG | 0.460930 | 3_2:-5787890 | Msa0392570:CDS |
| ACGTCACTGCTTTGGGCGCA+TGG | 0.461948 | 3_2:-5787633 | Msa0392570:CDS |
| GACCTTGATGCGCTTAACTT+AGG | 0.464421 | 3_2:-5789042 | Msa0392570:CDS |
| TCCTACCCCTCAAATGGAGC+AGG | 0.465260 | 3_2:-5787956 | Msa0392570:CDS |
| CTGTCCTTGCTCCATTTGAT+GGG | 0.465308 | 3_2:+5787921 | None:intergenic |
| TATGTCCCTGCTCCATTTGA+GGG | 0.466098 | 3_2:+5787950 | None:intergenic |
| TCAGAGCATATAATGGATCC+TGG | 0.468440 | 3_2:-5789267 | Msa0392570:intron |
| GTCTAGCTGGTTGAGTTGGG+GGG | 0.474367 | 3_2:+5788162 | None:intergenic |
| AAGGACCACTCTCAACGGTT+TGG | 0.474786 | 3_2:-5790666 | Msa0392570:CDS |
| GCTTACAGGAGTCCTAATAA+AGG | 0.475665 | 3_2:-5787168 | Msa0392570:CDS |
| AGGTGTTGCGACTCCTACTT+CGG | 0.476216 | 3_2:-5787145 | Msa0392570:CDS |
| GTACAACAAGAGGAGCCTTA+TGG | 0.477197 | 3_2:-5785752 | Msa0392570:CDS |
| TTCAAGCTGAAATCTTCAGC+AGG | 0.477953 | 3_2:+5786096 | None:intergenic |
| GCGCCACCATGAGAAGCATC+TGG | 0.477979 | 3_2:+5788131 | None:intergenic |
| CTTTGAGTTGGGATAGTGGC+AGG | 0.478045 | 3_2:+5787219 | None:intergenic |
| GCTATGAAATAGATATTAAC+GGG | 0.482884 | 3_2:-5789020 | Msa0392570:intron |
| ATCTCCACCGACAAGGGTAG+TGG | 0.483754 | 3_2:-5788423 | Msa0392570:CDS |
| TTTGCTTTGAGTTGGGATAG+TGG | 0.485270 | 3_2:+5787215 | None:intergenic |
| GGTGCTTGCCTCGCATCCTC+AGG | 0.489055 | 3_2:+5789096 | None:intergenic |
| ACATAGTTCTACCCATCAAA+TGG | 0.492093 | 3_2:-5787932 | Msa0392570:CDS |
| GAGGGAATGGAGATACTATA+CGG | 0.493315 | 3_2:-5787117 | Msa0392570:CDS |
| AATGGAGCAAGGACAGGGTC+AGG | 0.495980 | 3_2:-5787884 | Msa0392570:CDS |
| GTGAGAGGCCTCAAAGAGTA+AGG | 0.496584 | 3_2:-5787855 | Msa0392570:CDS |
| CCATCAAATGGAGCAAGGAC+AGG | 0.497665 | 3_2:-5787920 | Msa0392570:CDS |
| GCCTCAGATGGACAAGTTCA+TGG | 0.497833 | 3_2:-5788110 | Msa0392570:CDS |
| GAGACAATGCGTTCAATCTC+CGG | 0.498235 | 3_2:+5787258 | None:intergenic |
| TGCTCTGGAATTGTTGTACA+TGG | 0.498335 | 3_2:+5786120 | None:intergenic |
| GCCGACATCCTTAATGCAAT+GGG | 0.499582 | 3_2:+5789240 | None:intergenic |
| GACTCCTACTTCGGTTTCTG+AGG | 0.501640 | 3_2:-5787136 | Msa0392570:CDS |
| GGTCTAGCTGGTTGAGTTGG+GGG | 0.503022 | 3_2:+5788161 | None:intergenic |
| AGCTTGAACAAGATCTTGGA+TGG | 0.504519 | 3_2:-5786081 | Msa0392570:CDS |
| ATGTTATCATGATATGTGCT+AGG | 0.504604 | 3_2:+5787054 | None:intergenic |
| GGTGGCGGTTGTGCATTTGA+AGG | 0.510426 | 3_2:+5788581 | None:intergenic |
| CAAGATTGCAGTCGTTAAGA+AGG | 0.511577 | 3_2:+5789169 | None:intergenic |
| CATCTCCGAGGAAGATCATC+CGG | 0.513601 | 3_2:-5787412 | Msa0392570:CDS |
| CGGTTGTGCATTTGAAGGAC+TGG | 0.515647 | 3_2:+5788586 | None:intergenic |
| TGAACATCCACTACCCTTGT+CGG | 0.515801 | 3_2:+5788416 | None:intergenic |
| GGAGTAATAGTAGTATTATC+CGG | 0.515972 | 3_2:+5787393 | None:intergenic |
| TACTTCGGTTTCTGAGGGAA+TGG | 0.516748 | 3_2:-5787130 | Msa0392570:CDS |
| AACTTATAAACATACAAAGA+AGG | 0.517826 | 3_2:-5787464 | Msa0392570:CDS |
| GGTAGTATGTGACTCTATAT+GGG | 0.520004 | 3_2:+5788376 | None:intergenic |
| TTGAAGCTAATATCACCATA+AGG | 0.520542 | 3_2:+5785737 | None:intergenic |
| TTCTGATGCAAGACCAAATG+AGG | 0.521224 | 3_2:-5788555 | Msa0392570:CDS |
| TATTATAGTGGATAATTATG+TGG | 0.525323 | 3_2:-5788732 | Msa0392570:CDS |
| GATGCTTCCTACCCCTCAAA+TGG | 0.526984 | 3_2:-5787962 | Msa0392570:CDS |
| AGCTACCTGTAAATAAAGGC+TGG | 0.529463 | 3_2:+5787572 | None:intergenic |
| CATGGGAACTGAAGAGCAAA+AGG | 0.532189 | 3_2:-5787615 | Msa0392570:CDS |
| AGCCGACATCCTTAATGCAA+TGG | 0.534742 | 3_2:+5789239 | None:intergenic |
| TCCCATTGCATTAAGGATGT+CGG | 0.538243 | 3_2:-5789241 | Msa0392570:CDS |
| TCTGGAGTTAGTGGTCTAGC+TGG | 0.538631 | 3_2:+5788149 | None:intergenic |
| TTAGGACTCCTGTAAGCACT+TGG | 0.539155 | 3_2:+5787174 | None:intergenic |
| ATACATTGTCTGGGAGGACT+AGG | 0.539433 | 3_2:-5786391 | Msa0392570:intron |
| TCAGCAACTTGATTAATTGG+AGG | 0.542703 | 3_2:+5787372 | None:intergenic |
| TTGTCGATATCCATATCTGT+TGG | 0.543539 | 3_2:+5788242 | None:intergenic |
| ACCCTTGTCGGTGGAGATTG+GGG | 0.545746 | 3_2:+5788428 | None:intergenic |
| CAGAGCATATAATGGATCCT+GGG | 0.547443 | 3_2:-5789266 | Msa0392570:CDS |
| CCCTGCTCCATTTGAGGGGT+AGG | 0.548908 | 3_2:+5787955 | None:intergenic |
| TGTGACTCTATATGGGAACT+TGG | 0.549330 | 3_2:+5788383 | None:intergenic |
| AAGGTCAAAAGTGGCTGGCA+TGG | 0.550608 | 3_2:+5789059 | None:intergenic |
| CAAGGACAGGGTCAGGATCA+GGG | 0.553698 | 3_2:-5787877 | Msa0392570:CDS |
| GCATCAAGGTCAAAAGTGGC+TGG | 0.555614 | 3_2:+5789054 | None:intergenic |
| CTTAATGCAATGGGAACCCC+AGG | 0.556697 | 3_2:+5789249 | None:intergenic |
| TTCCCCAATCTCCACCGACA+AGG | 0.556745 | 3_2:-5788430 | Msa0392570:CDS |
| CGTCACTGCTTTGGGCGCAT+GGG | 0.557386 | 3_2:-5787632 | Msa0392570:CDS |
| AGGGTCAGGATCAGGGTGAG+AGG | 0.558925 | 3_2:-5787870 | Msa0392570:CDS |
| TAAAATACACATTTCTAAAG+GGG | 0.568883 | 3_2:+5785627 | None:intergenic |
| TGAGGATGCGAGGCAAGCAC+CGG | 0.574961 | 3_2:-5789094 | Msa0392570:CDS |
| TTGGTTGTGTCTTAGGTATG+AGG | 0.575285 | 3_2:-5788892 | Msa0392570:intron |
| AAAATAGAACATACTGGCTG+TGG | 0.576112 | 3_2:+5786554 | None:intergenic |
| CATCAAATGGAGCAAGGACA+GGG | 0.576993 | 3_2:-5787919 | Msa0392570:CDS |
| TCTAGCTGGTTGAGTTGGGG+GGG | 0.577025 | 3_2:+5788163 | None:intergenic |
| GCTATCGTCACTATTATGAC+TGG | 0.577246 | 3_2:+5788355 | None:intergenic |
| AAGCGCATCAAGGTCAAAAG+TGG | 0.581334 | 3_2:+5789050 | None:intergenic |
| AATAATGCTATCAAAACTTG+AGG | 0.585089 | 3_2:+5785496 | None:intergenic |
| TCCATGAACTTGTCCATCTG+AGG | 0.585386 | 3_2:+5788109 | None:intergenic |
| ACTCCTACTTCGGTTTCTGA+GGG | 0.585793 | 3_2:-5787135 | Msa0392570:CDS |
| TGTTATCATGATATGTGCTA+GGG | 0.586588 | 3_2:+5787055 | None:intergenic |
| GATCCTGAAAGATATGATGA+TGG | 0.587656 | 3_2:+5788333 | None:intergenic |
| TAGGACTCCTGTAAGCACTT+GGG | 0.589038 | 3_2:+5787175 | None:intergenic |
| AAACTAGAAAGATTGCTGCT+AGG | 0.590045 | 3_2:-5786056 | Msa0392570:CDS |
| ACCTATTTGGTAACACTATG+GGG | 0.591558 | 3_2:+5787809 | None:intergenic |
| TCCCCAATCTCCACCGACAA+GGG | 0.591628 | 3_2:-5788429 | Msa0392570:CDS |
| ACTTATAAACATACAAAGAA+GGG | 0.591939 | 3_2:-5787463 | Msa0392570:CDS |
| TAGAACATACTGGCTGTGGC+TGG | 0.594523 | 3_2:+5786558 | None:intergenic |
| AGCCTAAGTTAAGCGCATCA+AGG | 0.594597 | 3_2:+5789040 | None:intergenic |
| GAAGTATTGATACATTGTCT+GGG | 0.594902 | 3_2:-5786400 | Msa0392570:CDS |
| GATTAGTATCTGAAAAGTCA+TGG | 0.596164 | 3_2:+5787022 | None:intergenic |
| AAAGAACAACTCCTAAGAGA+TGG | 0.596677 | 3_2:+5787994 | None:intergenic |
| ATTCCCTCAGAAACCGAAGT+AGG | 0.596700 | 3_2:+5787132 | None:intergenic |
| CCTCAAATGGAGCAAGGACA+GGG | 0.597645 | 3_2:-5787889 | Msa0392570:CDS |
| TGAGCCAATAACAGATGCAC+CGG | 0.598552 | 3_2:-5787277 | Msa0392570:CDS |
| GGGTACTTACGAACAGTGGA+GGG | 0.600864 | 3_2:+5790586 | None:intergenic |
| TCTTATTGATGTACAACAAG+AGG | 0.600944 | 3_2:-5785762 | Msa0392570:CDS |
| TATATGTTCAAAACCTCACT+TGG | 0.605236 | 3_2:-5787436 | Msa0392570:CDS |
| ATTATCCGGATGATCTTCCT+CGG | 0.614080 | 3_2:+5787407 | None:intergenic |
| GTTTCTGATGCATGAGCTCG+AGG | 0.615602 | 3_2:+5787084 | None:intergenic |
| AGATCGAAGTCCTATTATAG+TGG | 0.617554 | 3_2:-5788744 | Msa0392570:CDS |
| CTAACTCCAGATGCTTCTCA+TGG | 0.617946 | 3_2:-5788137 | Msa0392570:CDS |
| GGCATGGTAATAGAATGAAC+CGG | 0.619797 | 3_2:+5789075 | None:intergenic |
| GCGATCCAAACCGTTGAGAG+TGG | 0.624581 | 3_2:+5790661 | None:intergenic |
| AGGGTAGTGGATGTTCAAGA+TGG | 0.628123 | 3_2:-5788410 | Msa0392570:CDS |
| GCGAAAAGGACCACTCTCAA+CGG | 0.628985 | 3_2:-5790671 | Msa0392570:CDS |
| TACAAAACAGACATTGCCAC+CGG | 0.629206 | 3_2:-5788306 | Msa0392570:CDS |
| GAAGAGCAAAAGGTTTAAGG+AGG | 0.629432 | 3_2:-5787605 | Msa0392570:CDS |
| TTAGGTATGAGGATGTTCAC+AGG | 0.630659 | 3_2:-5788881 | Msa0392570:intron |
| TCCTCGGAGATGACCAAGTG+AGG | 0.635663 | 3_2:+5787423 | None:intergenic |
| GGCAGGTTGATCATCAGCAA+CGG | 0.636374 | 3_2:+5787236 | None:intergenic |
| AGAGCATATAATGGATCCTG+GGG | 0.637648 | 3_2:-5789265 | Msa0392570:CDS |
| CCTGTTCCTCAAATGGAGCA+AGG | 0.639890 | 3_2:-5787895 | Msa0392570:CDS |
| GGTCTTGCATCAGAATCTGG+TGG | 0.641603 | 3_2:+5788563 | None:intergenic |
| CTTGCATCAGAATCTGGTGG+CGG | 0.641738 | 3_2:+5788566 | None:intergenic |
| TAAAGGGTACTTACGAACAG+TGG | 0.644432 | 3_2:+5790582 | None:intergenic |
| ACACTCTACCTGAGGATGCG+AGG | 0.644444 | 3_2:-5789104 | Msa0392570:CDS |
| TTAACCTCTAATTTACATCA+GGG | 0.646175 | 3_2:+5785650 | None:intergenic |
| ATCAAATAACACTCTACCTG+AGG | 0.646486 | 3_2:-5789112 | Msa0392570:CDS |
| GTAGTGGATGTTCAAGATGG+TGG | 0.648922 | 3_2:-5788407 | Msa0392570:CDS |
| TACAGGAGTCCTAATAAAGG+AGG | 0.651779 | 3_2:-5787165 | Msa0392570:CDS |
| CAACATACGAAGGAAGCGAA+AGG | 0.653048 | 3_2:-5787656 | Msa0392570:CDS |
| ATGTCCCTGCTCCATTTGAG+GGG | 0.653747 | 3_2:+5787951 | None:intergenic |
| AGGGTACTTACGAACAGTGG+AGG | 0.653985 | 3_2:+5790585 | None:intergenic |
| TACGAACAACACCTAAGAGT+AGG | 0.654224 | 3_2:+5789214 | None:intergenic |
| TCTACCCATCAAATGGAGCA+AGG | 0.655123 | 3_2:-5787925 | Msa0392570:CDS |
| ACTCCAGATGCTTCTCATGG+TGG | 0.657514 | 3_2:-5788134 | Msa0392570:CDS |
| ATGATACTCGCAACATACGA+AGG | 0.658966 | 3_2:-5787666 | Msa0392570:CDS |
| ACCTCACTTGGTCATCTCCG+AGG | 0.663917 | 3_2:-5787424 | Msa0392570:CDS |
| TGTGCATTTGAAGGACTGGA+TGG | 0.666531 | 3_2:+5788590 | None:intergenic |
| ACATCCACTACCCTTGTCGG+TGG | 0.667254 | 3_2:+5788419 | None:intergenic |
| CCTACCCCTCAAATGGAGCA+GGG | 0.672267 | 3_2:-5787955 | Msa0392570:CDS |
| AAGAGCAAAAGGTTTAAGGA+GGG | 0.683424 | 3_2:-5787604 | Msa0392570:CDS |
| TGTGGCTATACGTTTCGATG+AGG | 0.683845 | 3_2:-5788714 | Msa0392570:intron |
| GTATTGATACATTGTCTGGG+AGG | 0.691781 | 3_2:-5786397 | Msa0392570:CDS |
| TATCTTCTTCGAGAAACCAG+AGG | 0.692196 | 3_2:+5786586 | None:intergenic |
| AAAATGAAATAAAATCCAAG+GGG | 0.696713 | 3_2:+5785576 | None:intergenic |
| GGATCGCGAAGAGCTTCCGG+TGG | 0.705021 | 3_2:+5788290 | None:intergenic |
| GGTATGAGGATGTTCACAGG+AGG | 0.722754 | 3_2:-5788878 | Msa0392570:CDS |
| GTTATCATGATATGTGCTAG+GGG | 0.726681 | 3_2:+5787056 | None:intergenic |
| AAATGAAATAAAATCCAAGG+GGG | 0.728446 | 3_2:+5785577 | None:intergenic |
| TCAGATGGACAAGTTCATGG+AGG | 0.765200 | 3_2:-5788107 | Msa0392570:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATAAAAAAAAAA+GGG | + | chr3_2:5785711-5785730 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTGTCTAT+TGG | - | chr3_2:5786400-5786419 | Msa0392570:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTGTCTATT+GGG | - | chr3_2:5786401-5786420 | Msa0392570:CDS | 10.0% |
| !! | ATAATAAAATAAAACTATCA+TGG | + | chr3_2:5786491-5786510 | None:intergenic | 10.0% |
| !!! | AGAAAAATCAATTTTTTTAA+TGG | + | chr3_2:5786701-5786720 | None:intergenic | 10.0% |
| !!! | TATCAATTTATTACTATTTT+AGG | - | chr3_2:5789895-5789914 | Msa0392570:intron | 10.0% |
| !!! | AAAATATTAAATTTTAGCTT+TGG | + | chr3_2:5790565-5790584 | None:intergenic | 10.0% |
| !! | GACAAAAAAAAAAATTTGTA+TGG | + | chr3_2:5786437-5786456 | None:intergenic | 15.0% |
| !! | AAAACTAAGGTAATAAAAAT+CGG | + | chr3_2:5786872-5786891 | None:intergenic | 15.0% |
| !! | ATAATAGTATGAAAAGATAA+AGG | + | chr3_2:5787273-5787292 | None:intergenic | 15.0% |
| !! | AAATTTGTAACTCAAATTAA+AGG | + | chr3_2:5787612-5787631 | None:intergenic | 15.0% |
| !! | ATAACAATGTATTATTCTAT+TGG | + | chr3_2:5787792-5787811 | None:intergenic | 15.0% |
| !! | AATGAAAAAAATTACCTATT+TGG | + | chr3_2:5788466-5788485 | None:intergenic | 15.0% |
| !!! | ATATCAGTTAATTTTTAACT+TGG | + | chr3_2:5790263-5790282 | None:intergenic | 15.0% |
| !! | AAAAATGAAATAAAATCCAA+GGG | + | chr3_2:5790687-5790706 | None:intergenic | 15.0% |
| !! | AAAAAATGAAATAAAATCCA+AGG | + | chr3_2:5790688-5790707 | None:intergenic | 15.0% |
| !!! | TCTTGTTTTTCTGATAATTT+GGG | + | chr3_2:5785509-5785528 | None:intergenic | 20.0% |
| !!! | TTCTTGTTTTTCTGATAATT+TGG | + | chr3_2:5785510-5785529 | None:intergenic | 20.0% |
| !!! | TTTTTTCTCAAATTCCTATA+TGG | - | chr3_2:5785763-5785782 | Msa0392570:CDS | 20.0% |
| !!! | TTTTTCTCAAATTCCTATAT+GGG | - | chr3_2:5785764-5785783 | Msa0392570:CDS | 20.0% |
| !!! | ATGATGTTGTTTATTCTATT+GGG | - | chr3_2:5785806-5785825 | Msa0392570:intron | 20.0% |
| !! | AAGTTTATCAAAATTCTATC+TGG | - | chr3_2:5785917-5785936 | Msa0392570:intron | 20.0% |
| !! | AGTTTATCAAAATTCTATCT+GGG | - | chr3_2:5785918-5785937 | Msa0392570:intron | 20.0% |
| !!! | ATTTAGATATTTTGTGTCTT+AGG | - | chr3_2:5786522-5786541 | Msa0392570:intron | 20.0% |
| !!! | TTTTCTTGATTGAAAACAAA+AGG | - | chr3_2:5786715-5786734 | Msa0392570:intron | 20.0% |
| !! | AAACTAAGGTAATAAAAATC+GGG | + | chr3_2:5786871-5786890 | None:intergenic | 20.0% |
| !! | AACTTCGATTAAAAAAACTA+AGG | + | chr3_2:5786885-5786904 | None:intergenic | 20.0% |
| !!! | TATCAGTTGTATAGAAATTT+TGG | + | chr3_2:5787342-5787361 | None:intergenic | 20.0% |
| !! | CTATACAACTGATATAAAAT+TGG | - | chr3_2:5787348-5787367 | Msa0392570:CDS | 20.0% |
| !! | ACATAATTATCCACTATAAT+AGG | + | chr3_2:5787528-5787547 | None:intergenic | 20.0% |
| !!! | TATTATAGTGGATAATTATG+TGG | - | chr3_2:5787527-5787546 | Msa0392570:intron | 20.0% |
| !!! | ATAAGTTCTATGTTGATAAA+AGG | + | chr3_2:5787588-5787607 | None:intergenic | 20.0% |
| !!! | ACTTGTTTTCTTGTATTTTT+AGG | - | chr3_2:5787641-5787660 | Msa0392570:CDS | 20.0% |
| !!! | ATTTTTTCGTATTCAATCTT+AGG | - | chr3_2:5788229-5788248 | Msa0392570:CDS | 20.0% |
| !!! | TTTTTTCGTATTCAATCTTA+GGG | - | chr3_2:5788230-5788249 | Msa0392570:CDS | 20.0% |
| !!! | ATCATTCAATTTGCAAATTT+TGG | - | chr3_2:5788719-5788738 | Msa0392570:CDS | 20.0% |
| !! | AACTTATAAACATACAAAGA+AGG | - | chr3_2:5788795-5788814 | Msa0392570:intron | 20.0% |
| !! | ACTTATAAACATACAAAGAA+GGG | - | chr3_2:5788796-5788815 | Msa0392570:intron | 20.0% |
| !! | ATATACATATGACATATTGT+TGG | - | chr3_2:5789459-5789478 | Msa0392570:intron | 20.0% |
| !! | ACGAAAATATTCATTAACAA+TGG | + | chr3_2:5789498-5789517 | None:intergenic | 20.0% |
| !! | AAGTTATGTTAATATTTGCT+AGG | - | chr3_2:5789768-5789787 | Msa0392570:intron | 20.0% |
| !! | ATAAGTTGTTATGTTAACTT+TGG | - | chr3_2:5790069-5790088 | Msa0392570:intron | 20.0% |
| !! | TAAATAAAAGACAGTTATGT+AGG | + | chr3_2:5790336-5790355 | None:intergenic | 20.0% |
| !! | AAATTGAAGAGTTATATGAT+TGG | - | chr3_2:5790379-5790398 | Msa0392570:intron | 20.0% |
| !!! | TAAAATACACATTTCTAAAG+GGG | + | chr3_2:5790635-5790654 | None:intergenic | 20.0% |
| !! | GTAAAATACACATTTCTAAA+GGG | + | chr3_2:5790636-5790655 | None:intergenic | 20.0% |
| !! | AAAATGAAATAAAATCCAAG+GGG | + | chr3_2:5790686-5790705 | None:intergenic | 20.0% |
| !!! | AAGGTTTTAAATTAAGTGTA+AGG | + | chr3_2:5790734-5790753 | None:intergenic | 20.0% |
| !!! | AAGTTTTGATAGCATTATTT+TGG | - | chr3_2:5790767-5790786 | Msa0392570:five_prime_UTR | 20.0% |
| !!! | AAAAAGGGTTTTGAAGTAAA+GGG | + | chr3_2:5785696-5785715 | None:intergenic | 25.0% |
| !!! | AAAAAAGGGTTTTGAAGTAA+AGG | + | chr3_2:5785697-5785716 | None:intergenic | 25.0% |
| ! | AAAAATCACAAAACCCATAT+AGG | + | chr3_2:5785780-5785799 | None:intergenic | 25.0% |
| !!! | TATATGGGTTTTGTGATTTT+TGG | - | chr3_2:5785779-5785798 | Msa0392570:CDS | 25.0% |
| !! | GATGATGTTGTTTATTCTAT+TGG | - | chr3_2:5785805-5785824 | Msa0392570:intron | 25.0% |
| ! | GTAATGTTACTCATTCTATT+GGG | - | chr3_2:5785959-5785978 | Msa0392570:intron | 25.0% |
| !! | ATTTTTCTCAAAATCCTATC+TGG | - | chr3_2:5786059-5786078 | Msa0392570:CDS | 25.0% |
| !! | TTTTTCTCAAAATCCTATCT+GGG | - | chr3_2:5786060-5786079 | Msa0392570:CDS | 25.0% |
| !!! | GTTTTTGGATTTTTTTTGAG+CGG | - | chr3_2:5786082-5786101 | Msa0392570:CDS | 25.0% |
| ! | AAGTTTATCAAAAATCCATC+TGG | - | chr3_2:5786152-5786171 | Msa0392570:CDS | 25.0% |
| ! | AGTTTATCAAAAATCCATCT+GGG | - | chr3_2:5786153-5786172 | Msa0392570:CDS | 25.0% |
| ! | AACAATGTCAATAGATATTG+TGG | + | chr3_2:5786559-5786578 | None:intergenic | 25.0% |
| ! | AAAATCAGATAATCTTACTC+TGG | - | chr3_2:5786625-5786644 | Msa0392570:intron | 25.0% |
| ! | AAATCAGATAATCTTACTCT+GGG | - | chr3_2:5786626-5786645 | Msa0392570:intron | 25.0% |
| !!! | TTCAGTTTTTAAGTGTGTAA+AGG | - | chr3_2:5786904-5786923 | Msa0392570:intron | 25.0% |
| ! | GGCTATGAAATAGATATTAA+CGG | - | chr3_2:5787238-5787257 | Msa0392570:CDS | 25.0% |
| ! | GCTATGAAATAGATATTAAC+GGG | - | chr3_2:5787239-5787258 | Msa0392570:CDS | 25.0% |
| ! | TATAAAATTGGTTGTGTCTT+AGG | - | chr3_2:5787360-5787379 | Msa0392570:CDS | 25.0% |
| ! | ACTAAAATTATGAATCCACT+TGG | + | chr3_2:5787437-5787456 | None:intergenic | 25.0% |
| !!! | TTATTCTATTGGTTCATAAG+AGG | + | chr3_2:5787781-5787800 | None:intergenic | 25.0% |
| !! | AATATTTTCAACAGCATCAT+TGG | + | chr3_2:5787997-5788016 | None:intergenic | 25.0% |
| ! | TGAAAATATTCCAACAGATA+TGG | - | chr3_2:5788007-5788026 | Msa0392570:CDS | 25.0% |
| !!! | AATAACAGTTTTATGCTGAA+AGG | + | chr3_2:5789354-5789373 | None:intergenic | 25.0% |
| ! | TCATTAACAATGGAACAAAA+CGG | + | chr3_2:5789488-5789507 | None:intergenic | 25.0% |
| ! | AGTTAACATAACAACTTATG+TGG | + | chr3_2:5790068-5790087 | None:intergenic | 25.0% |
| !!! | TTTGGTTCTTCAAAATTTCA+GGG | - | chr3_2:5790087-5790106 | Msa0392570:intron | 25.0% |
| !!! | TATGTAGGTATTTGTTTTGT+TGG | + | chr3_2:5790321-5790340 | None:intergenic | 25.0% |
| !!! | GATATAAGTTTTGGAGATTA+AGG | + | chr3_2:5790443-5790462 | None:intergenic | 25.0% |
| !! | CAACATACAGATATAAGTTT+TGG | + | chr3_2:5790452-5790471 | None:intergenic | 25.0% |
| ! | TTAACCTCTAATTTACATCA+GGG | + | chr3_2:5790612-5790631 | None:intergenic | 25.0% |
| ! | GGTAAAATACACATTTCTAA+AGG | + | chr3_2:5790637-5790656 | None:intergenic | 25.0% |
| ! | TTACCTTAAGAGTAAATTAG+AGG | - | chr3_2:5790652-5790671 | Msa0392570:CDS | 25.0% |
| ! | TAACCTCTAATTTACTCTTA+AGG | + | chr3_2:5790658-5790677 | None:intergenic | 25.0% |
| ! | AAATGAAATAAAATCCAAGG+GGG | + | chr3_2:5790685-5790704 | None:intergenic | 25.0% |
| ! | AATAATGCTATCAAAACTTG+AGG | + | chr3_2:5790766-5790785 | None:intergenic | 25.0% |
| ! | GTTTTACTCTCAAACGTTTT+TGG | - | chr3_2:5785564-5785583 | Msa0392570:three_prime_UTR | 30.0% |
| GGTAATGTTACTCATTCTAT+TGG | - | chr3_2:5785958-5785977 | Msa0392570:intron | 30.0% | |
| AAAAATCCAAAAACCCAGAT+AGG | + | chr3_2:5786076-5786095 | None:intergenic | 30.0% | |
| GGTAATGTTGTTCATTCTAA+TGG | - | chr3_2:5786103-5786122 | Msa0392570:CDS | 30.0% | |
| !!! | GGATTTTAATTTTTCTGCGA+TGG | - | chr3_2:5786124-5786143 | Msa0392570:CDS | 30.0% |
| AAAAAATTCTCAAACCCAGA+TGG | + | chr3_2:5786170-5786189 | None:intergenic | 30.0% | |
| !!! | TCTGGGTTTGAGAATTTTTT+AGG | - | chr3_2:5786170-5786189 | Msa0392570:intron | 30.0% |
| !!! | CTGGGTTTGAGAATTTTTTA+GGG | - | chr3_2:5786171-5786190 | Msa0392570:intron | 30.0% |
| !!! | TGGGTTTGAGAATTTTTTAG+GGG | - | chr3_2:5786172-5786191 | Msa0392570:intron | 30.0% |
| AATGACTGAAAACCCAAATT+GGG | + | chr3_2:5786306-5786325 | None:intergenic | 30.0% | |
| AAATGACTGAAAACCCAAAT+TGG | + | chr3_2:5786307-5786326 | None:intergenic | 30.0% | |
| ! | ATAATCTTACTCTGGGTTTT+CGG | - | chr3_2:5786633-5786652 | Msa0392570:intron | 30.0% |
| GTTTCTTTCAGAGCATATAA+TGG | - | chr3_2:5786985-5787004 | Msa0392570:intron | 30.0% | |
| ATAAAAGGAATGAAGAGGAA+AGG | + | chr3_2:5787573-5787592 | None:intergenic | 30.0% | |
| ! | TGTTGATAAAAGGAATGAAG+AGG | + | chr3_2:5787578-5787597 | None:intergenic | 30.0% |
| CGTATGTAAATGTAAGAGAA+AGG | + | chr3_2:5788188-5788207 | None:intergenic | 30.0% | |
| ! | TACCTATTTGGTAACACTAT+GGG | + | chr3_2:5788454-5788473 | None:intergenic | 30.0% |
| ! | TTACCTATTTGGTAACACTA+TGG | + | chr3_2:5788455-5788474 | None:intergenic | 30.0% |
| CTTTCTTCATGACTCTATAA+TGG | + | chr3_2:5788567-5788586 | None:intergenic | 30.0% | |
| TATGTTGCGAGTATCATTAA+GGG | + | chr3_2:5788590-5788609 | None:intergenic | 30.0% | |
| TATATGTTCAAAACCTCACT+TGG | - | chr3_2:5788823-5788842 | Msa0392570:intron | 30.0% | |
| GGAGTAATAGTAGTATTATC+CGG | + | chr3_2:5788869-5788888 | None:intergenic | 30.0% | |
| TGTTATCATGATATGTGCTA+GGG | + | chr3_2:5789207-5789226 | None:intergenic | 30.0% | |
| ATGTTATCATGATATGTGCT+AGG | + | chr3_2:5789208-5789227 | None:intergenic | 30.0% | |
| GATTAGTATCTGAAAAGTCA+TGG | + | chr3_2:5789240-5789259 | None:intergenic | 30.0% | |
| AATCAATTTATCAGTTCTGC+TGG | - | chr3_2:5789256-5789275 | Msa0392570:CDS | 30.0% | |
| !! | AGTTTTATGCTGAAAGGAAA+TGG | + | chr3_2:5789348-5789367 | None:intergenic | 30.0% |
| ! | TCTTAACCTTGTTATATTGC+AGG | - | chr3_2:5789649-5789668 | Msa0392570:intron | 30.0% |
| ! | GACGTAAACTTTTTAATGAC+AGG | - | chr3_2:5789819-5789838 | Msa0392570:intron | 30.0% |
| !! | AGAAGTATTGATACATTGTC+TGG | - | chr3_2:5789858-5789877 | Msa0392570:intron | 30.0% |
| !! | GAAGTATTGATACATTGTCT+GGG | - | chr3_2:5789859-5789878 | Msa0392570:intron | 30.0% |
| !! | CTTTGGTTCTTCAAAATTTC+AGG | - | chr3_2:5790086-5790105 | Msa0392570:intron | 30.0% |
| ! | TTGGTTCTTCAAAATTTCAG+GGG | - | chr3_2:5790088-5790107 | Msa0392570:intron | 30.0% |
| !!! | TAGGATGTTCTTTGAAGTTT+TGG | - | chr3_2:5790222-5790241 | Msa0392570:intron | 30.0% |
| ACTAACTGTCAAATTTGATG+TGG | - | chr3_2:5790355-5790374 | Msa0392570:intron | 30.0% | |
| ATATCTGTATGTTGCATTAC+AGG | - | chr3_2:5790458-5790477 | Msa0392570:intron | 30.0% | |
| TCTTATTGATGTACAACAAG+AGG | - | chr3_2:5790497-5790516 | Msa0392570:intron | 30.0% | |
| TTGAAGCTAATATCACCATA+AGG | + | chr3_2:5790525-5790544 | None:intergenic | 30.0% | |
| GTTAACCTCTAATTTACATC+AGG | + | chr3_2:5790613-5790632 | None:intergenic | 30.0% | |
| AAACTTGAGGAGAAATCATA+AGG | + | chr3_2:5790753-5790772 | None:intergenic | 30.0% | |
| !! | ATGGGTTTTGTGATTTTTGG+AGG | - | chr3_2:5785782-5785801 | Msa0392570:CDS | 35.0% |
| !! | TGGGTTTTGTGATTTTTGGA+GGG | - | chr3_2:5785783-5785802 | Msa0392570:intron | 35.0% |
| !!! | TCTGGGTTGAGTTTTTTTTG+TGG | - | chr3_2:5785935-5785954 | Msa0392570:intron | 35.0% |
| !!! | CTGGGTTGAGTTTTTTTTGT+GGG | - | chr3_2:5785936-5785955 | Msa0392570:intron | 35.0% |
| !!! | TGGGTTGAGTTTTTTTTGTG+GGG | - | chr3_2:5785937-5785956 | Msa0392570:intron | 35.0% |
| ! | CAAAATCCTATCTGGGTTTT+TGG | - | chr3_2:5786067-5786086 | Msa0392570:CDS | 35.0% |
| !!! | GGGTTTGAGAATTTTTTAGG+GGG | - | chr3_2:5786173-5786192 | Msa0392570:intron | 35.0% |
| ATCAAAACCCAAACCCAATT+TGG | - | chr3_2:5786290-5786309 | Msa0392570:intron | 35.0% | |
| TCAAAACCCAAACCCAATTT+GGG | - | chr3_2:5786291-5786310 | Msa0392570:intron | 35.0% | |
| TGAAAACCCAAATTGGGTTT+GGG | + | chr3_2:5786300-5786319 | None:intergenic | 35.0% | |
| !! | ACTTGCTATGCCATAAAAGT+GGG | + | chr3_2:5786827-5786846 | None:intergenic | 35.0% |
| !! | AACTTGCTATGCCATAAAAG+TGG | + | chr3_2:5786828-5786847 | None:intergenic | 35.0% |
| TAGCAAGTTTCAGCCTTTAT+TGG | - | chr3_2:5786839-5786858 | Msa0392570:intron | 35.0% | |
| ATCAAATAACACTCTACCTG+AGG | - | chr3_2:5787147-5787166 | Msa0392570:CDS | 35.0% | |
| AGATCGAAGTCCTATTATAG+TGG | - | chr3_2:5787515-5787534 | Msa0392570:intron | 35.0% | |
| AAAGCTTACTCTTCCTCATT+TGG | + | chr3_2:5787720-5787739 | None:intergenic | 35.0% | |
| !!! | AGAGTAAGCTTTGTTGGTTT+TGG | - | chr3_2:5787728-5787747 | Msa0392570:intron | 35.0% |
| GATTGGGGAATAAATCTACA+AGG | + | chr3_2:5787819-5787838 | None:intergenic | 35.0% | |
| GGTAGTATGTGACTCTATAT+GGG | + | chr3_2:5787886-5787905 | None:intergenic | 35.0% | |
| TGGTAGTATGTGACTCTATA+TGG | + | chr3_2:5787887-5787906 | None:intergenic | 35.0% | |
| TAGCCATCATCATATCTTTC+AGG | - | chr3_2:5787923-5787942 | Msa0392570:CDS | 35.0% | |
| GATCCTGAAAGATATGATGA+TGG | + | chr3_2:5787929-5787948 | None:intergenic | 35.0% | |
| ! | TGGCAATGTCTGTTTTGTAA+CGG | + | chr3_2:5787952-5787971 | None:intergenic | 35.0% |
| ! | TTTTCAACAGCATCATTGGA+GGG | + | chr3_2:5787993-5788012 | None:intergenic | 35.0% |
| ! | ATTTTCAACAGCATCATTGG+AGG | + | chr3_2:5787994-5788013 | None:intergenic | 35.0% |
| TTGTCGATATCCATATCTGT+TGG | + | chr3_2:5788020-5788039 | None:intergenic | 35.0% | |
| CGACAAAACTGTTCATGAAA+AGG | - | chr3_2:5788034-5788053 | Msa0392570:intron | 35.0% | |
| CTAAGAGATGGTTCAGAAAT+TGG | + | chr3_2:5788256-5788275 | None:intergenic | 35.0% | |
| CAATTTCTGAACCATCTCTT+AGG | - | chr3_2:5788254-5788273 | Msa0392570:CDS | 35.0% | |
| AAAGAACAACTCCTAAGAGA+TGG | + | chr3_2:5788268-5788287 | None:intergenic | 35.0% | |
| ! | ACATAGTTCTACCCATCAAA+TGG | - | chr3_2:5788327-5788346 | Msa0392570:CDS | 35.0% |
| TTTCTCTTCCTTACTCTTTG+AGG | + | chr3_2:5788415-5788434 | None:intergenic | 35.0% | |
| ! | ACCTATTTGGTAACACTATG+GGG | + | chr3_2:5788453-5788472 | None:intergenic | 35.0% |
| AGAAACGAGTATAGGAAAAC+CGG | + | chr3_2:5788532-5788551 | None:intergenic | 35.0% | |
| CAAACATGAGAAACGAGTAT+AGG | + | chr3_2:5788540-5788559 | None:intergenic | 35.0% | |
| CTATACTCGTTTCTCATGTT+TGG | - | chr3_2:5788538-5788557 | Msa0392570:intron | 35.0% | |
| GTATGTTGCGAGTATCATTA+AGG | + | chr3_2:5788591-5788610 | None:intergenic | 35.0% | |
| ACTGAAGAGCAAAAGGTTTA+AGG | - | chr3_2:5788651-5788670 | Msa0392570:intron | 35.0% | |
| AAGAGCAAAAGGTTTAAGGA+GGG | - | chr3_2:5788655-5788674 | Msa0392570:intron | 35.0% | |
| ! | TTTGACCAGCCTTTATTTAC+AGG | - | chr3_2:5788682-5788701 | Msa0392570:intron | 35.0% |
| GAACAGCTACCTGTAAATAA+AGG | + | chr3_2:5788694-5788713 | None:intergenic | 35.0% | |
| CATTCCTCAATTGAAACTTG+TGG | - | chr3_2:5788748-5788767 | Msa0392570:intron | 35.0% | |
| AAACTTGTGGCTTCTTATTC+AGG | - | chr3_2:5788761-5788780 | Msa0392570:intron | 35.0% | |
| TCAGCAACTTGATTAATTGG+AGG | + | chr3_2:5788890-5788909 | None:intergenic | 35.0% | |
| TCGTCAGCAACTTGATTAAT+TGG | + | chr3_2:5788893-5788912 | None:intergenic | 35.0% | |
| ! | ATTTCAGGTGCATCAGTTAT+TGG | + | chr3_2:5788917-5788936 | None:intergenic | 35.0% |
| ! | ATTTCAGGTGCATCAGTTAT+TGG | + | chr3_2:5788917-5788936 | None:intergenic | 35.0% |
| GTTATCATGATATGTGCTAG+GGG | + | chr3_2:5789206-5789225 | None:intergenic | 35.0% | |
| ATCGTAAGAGAGCAAAAAGA+TGG | + | chr3_2:5789431-5789450 | None:intergenic | 35.0% | |
| ! | TCTTTTTGCTCTCTTACGAT+AGG | - | chr3_2:5789431-5789450 | Msa0392570:intron | 35.0% |
| TTGCACACAATATCCTTGTA+CGG | - | chr3_2:5789581-5789600 | Msa0392570:intron | 35.0% | |
| ! | AAAATAGAACATACTGGCTG+TGG | + | chr3_2:5789708-5789727 | None:intergenic | 35.0% |
| GACACGAAAATAGAACATAC+TGG | + | chr3_2:5789714-5789733 | None:intergenic | 35.0% | |
| CATTAAATCACCTTAGCGAA+AGG | - | chr3_2:5789956-5789975 | Msa0392570:intron | 35.0% | |
| CTATGGAAAAGCTTTCCATT+TGG | - | chr3_2:5789979-5789998 | Msa0392570:intron | 35.0% | |
| TTCGCTAAGGTGATTTAATG+TGG | + | chr3_2:5789956-5789975 | None:intergenic | 35.0% | |
| CATTAAATCACCTTAGCGAA+AGG | - | chr3_2:5789956-5789975 | Msa0392570:intron | 35.0% | |
| CTATGGAAAAGCTTTCCATT+TGG | - | chr3_2:5789979-5789998 | Msa0392570:intron | 35.0% | |
| TTTCAGCTTGAACAAGATCT+TGG | - | chr3_2:5790174-5790193 | Msa0392570:intron | 35.0% | |
| AAACTAGAAAGATTGCTGCT+AGG | - | chr3_2:5790203-5790222 | Msa0392570:intron | 35.0% | |
| ATTTACATCAGGGACTAAAC+TGG | + | chr3_2:5790602-5790621 | None:intergenic | 35.0% | |
| TAGTCCCTGATGTAAATTAG+AGG | - | chr3_2:5790605-5790624 | Msa0392570:CDS | 35.0% | |
| !! | TAAAGGGTACTTACGAACAG+TGG | + | chr3_2:5785680-5785699 | None:intergenic | 40.0% |
| CTGAAAACCCAAATTGGGTT+TGG | + | chr3_2:5786301-5786320 | None:intergenic | 40.0% | |
| GAGTCTGTTAGTTCCTATTG+TGG | - | chr3_2:5786330-5786349 | Msa0392570:intron | 40.0% | |
| TCTGTTAGTTCCTATTGTGG+TGG | - | chr3_2:5786333-5786352 | Msa0392570:intron | 40.0% | |
| AGGGACAATGTTACTCTGTA+GGG | - | chr3_2:5786665-5786684 | Msa0392570:intron | 40.0% | |
| !! | CGGTTTGTTTCCCACTTTTA+TGG | - | chr3_2:5786814-5786833 | Msa0392570:intron | 40.0% |
| AATCGGGTAGACTCCAATAA+AGG | + | chr3_2:5786855-5786874 | None:intergenic | 40.0% | |
| !! | TCAGAGCATATAATGGATCC+TGG | - | chr3_2:5786992-5787011 | Msa0392570:intron | 40.0% |
| !! | CAGAGCATATAATGGATCCT+GGG | - | chr3_2:5786993-5787012 | Msa0392570:intron | 40.0% |
| !! | AGAGCATATAATGGATCCTG+GGG | - | chr3_2:5786994-5787013 | Msa0392570:intron | 40.0% |
| TCCCATTGCATTAAGGATGT+CGG | - | chr3_2:5787018-5787037 | Msa0392570:CDS | 40.0% | |
| TACGAACAACACCTAAGAGT+AGG | + | chr3_2:5787048-5787067 | None:intergenic | 40.0% | |
| CAAGATTGCAGTCGTTAAGA+AGG | + | chr3_2:5787093-5787112 | None:intergenic | 40.0% | |
| GGCATGGTAATAGAATGAAC+CGG | + | chr3_2:5787187-5787206 | None:intergenic | 40.0% | |
| TTGGTTGTGTCTTAGGTATG+AGG | - | chr3_2:5787367-5787386 | Msa0392570:CDS | 40.0% | |
| TTAGGTATGAGGATGTTCAC+AGG | - | chr3_2:5787378-5787397 | Msa0392570:CDS | 40.0% | |
| CAAGATGAGATTACTCTTGC+AGG | - | chr3_2:5787407-5787426 | Msa0392570:CDS | 40.0% | |
| !! | TTTGGTCTTGCATCAGAATC+TGG | + | chr3_2:5787702-5787721 | None:intergenic | 40.0% |
| TTCTGATGCAAGACCAAATG+AGG | - | chr3_2:5787704-5787723 | Msa0392570:intron | 40.0% | |
| ! | TGAGGAAGAGTAAGCTTTGT+TGG | - | chr3_2:5787722-5787741 | Msa0392570:intron | 40.0% |
| TGTGACTCTATATGGGAACT+TGG | + | chr3_2:5787879-5787898 | None:intergenic | 40.0% | |
| GCTATCGTCACTATTATGAC+TGG | + | chr3_2:5787907-5787926 | None:intergenic | 40.0% | |
| ! | GGCAATGTCTGTTTTGTAAC+GGG | + | chr3_2:5787951-5787970 | None:intergenic | 40.0% |
| TACAAAACAGACATTGCCAC+CGG | - | chr3_2:5787953-5787972 | Msa0392570:CDS | 40.0% | |
| TGGATCTCAGGAATCATTTC+AGG | + | chr3_2:5788068-5788087 | None:intergenic | 40.0% | |
| ACCCCATAGTGTTACCAAAT+AGG | - | chr3_2:5788449-5788468 | Msa0392570:intron | 40.0% | |
| CTACAACATATAGTTACGCC+CGG | - | chr3_2:5788510-5788529 | Msa0392570:intron | 40.0% | |
| GAAACGAGTATAGGAAAACC+GGG | + | chr3_2:5788531-5788550 | None:intergenic | 40.0% | |
| ATGATACTCGCAACATACGA+AGG | - | chr3_2:5788593-5788612 | Msa0392570:CDS | 40.0% | |
| GAAGAGCAAAAGGTTTAAGG+AGG | - | chr3_2:5788654-5788673 | Msa0392570:intron | 40.0% | |
| AGCTACCTGTAAATAAAGGC+TGG | + | chr3_2:5788690-5788709 | None:intergenic | 40.0% | |
| GAAGCCACAAGTTTCAATTG+AGG | + | chr3_2:5788755-5788774 | None:intergenic | 40.0% | |
| ATTATCCGGATGATCTTCCT+CGG | + | chr3_2:5788855-5788874 | None:intergenic | 40.0% | |
| !! | TTTGCTTTGAGTTGGGATAG+TGG | + | chr3_2:5789047-5789066 | None:intergenic | 40.0% |
| ! | CAGTGTCTTTGCTTTGAGTT+GGG | + | chr3_2:5789054-5789073 | None:intergenic | 40.0% |
| ! | TCAGTGTCTTTGCTTTGAGT+TGG | + | chr3_2:5789055-5789074 | None:intergenic | 40.0% |
| AGATAATCCCAAGTGCTTAC+AGG | - | chr3_2:5789077-5789096 | Msa0392570:CDS | 40.0% | |
| GCTTACAGGAGTCCTAATAA+AGG | - | chr3_2:5789091-5789110 | Msa0392570:CDS | 40.0% | |
| TACAGGAGTCCTAATAAAGG+AGG | - | chr3_2:5789094-5789113 | Msa0392570:CDS | 40.0% | |
| GAGGGAATGGAGATACTATA+CGG | - | chr3_2:5789142-5789161 | Msa0392570:CDS | 40.0% | |
| TTGCTCTCTTACGATAGGTA+AGG | - | chr3_2:5789436-5789455 | Msa0392570:intron | 40.0% | |
| GTACAAGGATATTGTGTGCA+AGG | + | chr3_2:5789582-5789601 | None:intergenic | 40.0% | |
| ! | TCCTTGTACGGTTTTGCTTT+TGG | - | chr3_2:5789593-5789612 | Msa0392570:intron | 40.0% |
| ACCAAAAGCAAAACCGTACA+AGG | + | chr3_2:5789597-5789616 | None:intergenic | 40.0% | |
| AGAGGTCCTGCAATATAACA+AGG | + | chr3_2:5789658-5789677 | None:intergenic | 40.0% | |
| TTGTTATATTGCAGGACCTC+TGG | - | chr3_2:5789657-5789676 | Msa0392570:intron | 40.0% | |
| TATCTTCTTCGAGAAACCAG+AGG | + | chr3_2:5789676-5789695 | None:intergenic | 40.0% | |
| ! | GTATTGATACATTGTCTGGG+AGG | - | chr3_2:5789862-5789881 | Msa0392570:intron | 40.0% |
| ! | TTTTCCATAGCCTTTCGCTA+AGG | + | chr3_2:5789969-5789988 | None:intergenic | 40.0% |
| TAATGTGGCACAGATCCAAA+TGG | + | chr3_2:5789997-5790016 | None:intergenic | 40.0% | |
| ! | TTTTCCATAGCCTTTCGCTA+AGG | + | chr3_2:5789969-5789988 | None:intergenic | 40.0% |
| TTATGTGGCACAGATCCAAA+TGG | + | chr3_2:5790053-5790072 | None:intergenic | 40.0% | |
| !! | TGCTCTGGAATTGTTGTACA+TGG | + | chr3_2:5790142-5790161 | None:intergenic | 40.0% |
| TTCAAGCTGAAATCTTCAGC+AGG | + | chr3_2:5790166-5790185 | None:intergenic | 40.0% | |
| AGCTTGAACAAGATCTTGGA+TGG | - | chr3_2:5790178-5790197 | Msa0392570:intron | 40.0% | |
| !! | TTTTGTTGGCGAGCTTTGAT+TGG | + | chr3_2:5790307-5790326 | None:intergenic | 40.0% |
| !!! | ATTTTAGCTTTGGCAAGTGC+TGG | + | chr3_2:5790555-5790574 | None:intergenic | 40.0% |
| TGAAATAAAATCCAAGGGGG+TGG | + | chr3_2:5790682-5790701 | None:intergenic | 40.0% | |
| !!! | CAAACGTTTTTGGCGCGAAA+AGG | - | chr3_2:5785574-5785593 | Msa0392570:three_prime_UTR | 45.0% |
| GTTAGTTCCTATTGTGGTGG+TGG | - | chr3_2:5786336-5786355 | Msa0392570:intron | 45.0% | |
| GAGGGACAATGTTACTCTGT+AGG | - | chr3_2:5786664-5786683 | Msa0392570:intron | 45.0% | |
| !!! | TTGAACCGCCGTTTTTTGAC+CGG | - | chr3_2:5786786-5786805 | Msa0392570:intron | 45.0% |
| ATCATCCGGTCAAAAAACGG+CGG | + | chr3_2:5786794-5786813 | None:intergenic | 45.0% | |
| CCGATCATCCGGTCAAAAAA+CGG | + | chr3_2:5786797-5786816 | None:intergenic | 45.0% | |
| !!! | CCGTTTTTTGACCGGATGAT+CGG | - | chr3_2:5786794-5786813 | Msa0392570:intron | 45.0% |
| TGGGAAACAAACCGATCATC+CGG | + | chr3_2:5786808-5786827 | None:intergenic | 45.0% | |
| GCCGACATCCTTAATGCAAT+GGG | + | chr3_2:5787022-5787041 | None:intergenic | 45.0% | |
| AGCCGACATCCTTAATGCAA+TGG | + | chr3_2:5787023-5787042 | None:intergenic | 45.0% | |
| AAGCGCATCAAGGTCAAAAG+TGG | + | chr3_2:5787212-5787231 | None:intergenic | 45.0% | |
| GACCTTGATGCGCTTAACTT+AGG | - | chr3_2:5787217-5787236 | Msa0392570:CDS | 45.0% | |
| AGCCTAAGTTAAGCGCATCA+AGG | + | chr3_2:5787222-5787241 | None:intergenic | 45.0% | |
| ACTCTTGCAGGTTAACCAAG+TGG | - | chr3_2:5787419-5787438 | Msa0392570:CDS | 45.0% | |
| ATAGGACTTCGATCTGCACA+TGG | + | chr3_2:5787510-5787529 | None:intergenic | 45.0% | |
| TGTGGCTATACGTTTCGATG+AGG | - | chr3_2:5787545-5787564 | Msa0392570:intron | 45.0% | |
| TGTGCATTTGAAGGACTGGA+TGG | + | chr3_2:5787672-5787691 | None:intergenic | 45.0% | |
| TGAACATCCACTACCCTTGT+CGG | + | chr3_2:5787846-5787865 | None:intergenic | 45.0% | |
| !! | AGGGTAGTGGATGTTCAAGA+TGG | - | chr3_2:5787849-5787868 | Msa0392570:CDS | 45.0% |
| !! | GTAGTGGATGTTCAAGATGG+TGG | - | chr3_2:5787852-5787871 | Msa0392570:CDS | 45.0% |
| !! | TGAGAAGCATCTGGAGTTAG+TGG | + | chr3_2:5788122-5788141 | None:intergenic | 45.0% |
| CTAACTCCAGATGCTTCTCA+TGG | - | chr3_2:5788122-5788141 | Msa0392570:CDS | 45.0% | |
| TCCATGAACTTGTCCATCTG+AGG | + | chr3_2:5788153-5788172 | None:intergenic | 45.0% | |
| TCAGATGGACAAGTTCATGG+AGG | - | chr3_2:5788152-5788171 | Msa0392570:CDS | 45.0% | |
| TATGTCCCTGCTCCATTTGA+GGG | + | chr3_2:5788312-5788331 | None:intergenic | 45.0% | |
| TCTACCCATCAAATGGAGCA+AGG | - | chr3_2:5788334-5788353 | Msa0392570:CDS | 45.0% | |
| CTGTCCTTGCTCCATTTGAT+GGG | + | chr3_2:5788341-5788360 | None:intergenic | 45.0% | |
| CATCAAATGGAGCAAGGACA+GGG | - | chr3_2:5788340-5788359 | Msa0392570:CDS | 45.0% | |
| GTTGTAGGACACAAAAGCAG+TGG | + | chr3_2:5788497-5788516 | None:intergenic | 45.0% | |
| CGGGCGTAACTATATGTTGT+AGG | + | chr3_2:5788512-5788531 | None:intergenic | 45.0% | |
| CAACATACGAAGGAAGCGAA+AGG | - | chr3_2:5788603-5788622 | Msa0392570:intron | 45.0% | |
| CATGGGAACTGAAGAGCAAA+AGG | - | chr3_2:5788644-5788663 | Msa0392570:intron | 45.0% | |
| GGCTCATCAACAACGATTTC+AGG | + | chr3_2:5788968-5788987 | None:intergenic | 45.0% | |
| GAGACAATGCGTTCAATCTC+CGG | + | chr3_2:5789004-5789023 | None:intergenic | 45.0% | |
| TAGGACTCCTGTAAGCACTT+GGG | + | chr3_2:5789087-5789106 | None:intergenic | 45.0% | |
| TTAGGACTCCTGTAAGCACT+TGG | + | chr3_2:5789088-5789107 | None:intergenic | 45.0% | |
| GTCGCAACACCTCCTTTATT+AGG | + | chr3_2:5789106-5789125 | None:intergenic | 45.0% | |
| ACTCCTACTTCGGTTTCTGA+GGG | - | chr3_2:5789124-5789143 | Msa0392570:CDS | 45.0% | |
| ATTCCCTCAGAAACCGAAGT+AGG | + | chr3_2:5789130-5789149 | None:intergenic | 45.0% | |
| ! | TACTTCGGTTTCTGAGGGAA+TGG | - | chr3_2:5789129-5789148 | Msa0392570:CDS | 45.0% |
| GTGTGCAAGGTAGAATATGC+AGG | + | chr3_2:5789569-5789588 | None:intergenic | 45.0% | |
| ATACATTGTCTGGGAGGACT+AGG | - | chr3_2:5789868-5789887 | Msa0392570:intron | 45.0% | |
| ATCACCTTAGCGAAAGGCTA+TGG | - | chr3_2:5789962-5789981 | Msa0392570:intron | 45.0% | |
| ATCACCTTAGCGAAAGGCTA+TGG | - | chr3_2:5789962-5789981 | Msa0392570:intron | 45.0% | |
| AAATCTTCAGCAGGTTGCTC+TGG | + | chr3_2:5790157-5790176 | None:intergenic | 45.0% | |
| GTACAACAAGAGGAGCCTTA+TGG | - | chr3_2:5790507-5790526 | Msa0392570:intron | 45.0% | |
| !! | CAATAAAAAATAAAAAAAAA+AGG | + | chr3_2:5785712-5785731 | None:intergenic | 5.0% |
| !!! | TTTATTTCATTTTTTTTTAT+AGG | - | chr3_2:5790693-5790712 | Msa0392570:CDS | 5.0% |
| GCGAAAAGGACCACTCTCAA+CGG | - | chr3_2:5785588-5785607 | Msa0392570:three_prime_UTR | 50.0% | |
| AAGGACCACTCTCAACGGTT+TGG | - | chr3_2:5785593-5785612 | Msa0392570:three_prime_UTR | 50.0% | |
| GGGTACTTACGAACAGTGGA+GGG | + | chr3_2:5785676-5785695 | None:intergenic | 50.0% | |
| ! | AGGGTACTTACGAACAGTGG+AGG | + | chr3_2:5785677-5785696 | None:intergenic | 50.0% |
| !! | TTCCTATTGTGGTGGTGGTG+AGG | - | chr3_2:5786341-5786360 | Msa0392570:intron | 50.0% |
| CTTAATGCAATGGGAACCCC+AGG | + | chr3_2:5787013-5787032 | None:intergenic | 50.0% | |
| CTGGGGTTCCCATTGCATTA+AGG | - | chr3_2:5787011-5787030 | Msa0392570:CDS | 50.0% | |
| !! | ATGTCGGCTCACCTACTCTT+AGG | - | chr3_2:5787034-5787053 | Msa0392570:CDS | 50.0% |
| AAGGTCAAAAGTGGCTGGCA+TGG | + | chr3_2:5787203-5787222 | None:intergenic | 50.0% | |
| GCATCAAGGTCAAAAGTGGC+TGG | + | chr3_2:5787208-5787227 | None:intergenic | 50.0% | |
| GGTATGAGGATGTTCACAGG+AGG | - | chr3_2:5787381-5787400 | Msa0392570:CDS | 50.0% | |
| CGGTTGTGCATTTGAAGGAC+TGG | + | chr3_2:5787676-5787695 | None:intergenic | 50.0% | |
| CTTGCATCAGAATCTGGTGG+CGG | + | chr3_2:5787696-5787715 | None:intergenic | 50.0% | |
| GGTCTTGCATCAGAATCTGG+TGG | + | chr3_2:5787699-5787718 | None:intergenic | 50.0% | |
| TACCCTTGTCGGTGGAGATT+GGG | + | chr3_2:5787835-5787854 | None:intergenic | 50.0% | |
| ! | TGGTCTAGCTGGTTGAGTTG+GGG | + | chr3_2:5788102-5788121 | None:intergenic | 50.0% |
| GTGGTCTAGCTGGTTGAGTT+GGG | + | chr3_2:5788103-5788122 | None:intergenic | 50.0% | |
| AGTGGTCTAGCTGGTTGAGT+TGG | + | chr3_2:5788104-5788123 | None:intergenic | 50.0% | |
| ! | TCTGGAGTTAGTGGTCTAGC+TGG | + | chr3_2:5788113-5788132 | None:intergenic | 50.0% |
| ACTCCAGATGCTTCTCATGG+TGG | - | chr3_2:5788125-5788144 | Msa0392570:CDS | 50.0% | |
| GCCTCAGATGGACAAGTTCA+TGG | - | chr3_2:5788149-5788168 | Msa0392570:CDS | 50.0% | |
| GATGCTTCCTACCCCTCAAA+TGG | - | chr3_2:5788297-5788316 | Msa0392570:CDS | 50.0% | |
| ATGTCCCTGCTCCATTTGAG+GGG | + | chr3_2:5788311-5788330 | None:intergenic | 50.0% | |
| CTATGTCCCTGCTCCATTTG+AGG | + | chr3_2:5788313-5788332 | None:intergenic | 50.0% | |
| CCTGTCCTTGCTCCATTTGA+TGG | + | chr3_2:5788342-5788361 | None:intergenic | 50.0% | |
| CCATCAAATGGAGCAAGGAC+AGG | - | chr3_2:5788339-5788358 | Msa0392570:CDS | 50.0% | |
| ACAGGGTCCTGTTCCTCAAA+TGG | - | chr3_2:5788357-5788376 | Msa0392570:CDS | 50.0% | |
| CCTTGCTCCATTTGAGGAAC+AGG | + | chr3_2:5788367-5788386 | None:intergenic | 50.0% | |
| CCTGTTCCTCAAATGGAGCA+AGG | - | chr3_2:5788364-5788383 | Msa0392570:CDS | 50.0% | |
| TCCTCAAATGGAGCAAGGAC+AGG | - | chr3_2:5788369-5788388 | Msa0392570:CDS | 50.0% | |
| CCTCAAATGGAGCAAGGACA+GGG | - | chr3_2:5788370-5788389 | Msa0392570:CDS | 50.0% | |
| GTGAGAGGCCTCAAAGAGTA+AGG | - | chr3_2:5788404-5788423 | Msa0392570:CDS | 50.0% | |
| CGAAAGGACGTCACTGCTTT+GGG | - | chr3_2:5788619-5788638 | Msa0392570:intron | 50.0% | |
| CATCTCCGAGGAAGATCATC+CGG | - | chr3_2:5788847-5788866 | Msa0392570:intron | 50.0% | |
| GGCTCGTCAACAGCAATTTC+AGG | + | chr3_2:5788932-5788951 | None:intergenic | 50.0% | |
| !! | GGCAGGTTGATCATCAGCAA+CGG | + | chr3_2:5789026-5789045 | None:intergenic | 50.0% |
| !! | CTTTGAGTTGGGATAGTGGC+AGG | + | chr3_2:5789043-5789062 | None:intergenic | 50.0% |
| ! | AGGTGTTGCGACTCCTACTT+CGG | - | chr3_2:5789114-5789133 | Msa0392570:CDS | 50.0% |
| GACTCCTACTTCGGTTTCTG+AGG | - | chr3_2:5789123-5789142 | Msa0392570:CDS | 50.0% | |
| GTTTCTGATGCATGAGCTCG+AGG | + | chr3_2:5789178-5789197 | None:intergenic | 50.0% | |
| CGAGCTCATGCATCAGAAAC+TGG | - | chr3_2:5789178-5789197 | Msa0392570:CDS | 50.0% | |
| ! | TAGAACATACTGGCTGTGGC+TGG | + | chr3_2:5789704-5789723 | None:intergenic | 50.0% |
| TTAGAGGTTAACCACCCCCT+TGG | - | chr3_2:5790668-5790687 | Msa0392570:CDS | 50.0% | |
| GCGATCCAAACCGTTGAGAG+TGG | + | chr3_2:5785601-5785620 | None:intergenic | 55.0% | |
| AGCCTCACCACCACCACAAT+AGG | + | chr3_2:5786346-5786365 | None:intergenic | 55.0% | |
| ! | TGGGTTTTCGGTCACTTGCG+AGG | - | chr3_2:5786645-5786664 | Msa0392570:intron | 55.0% |
| ! | GGGTTTTCGGTCACTTGCGA+GGG | - | chr3_2:5786646-5786665 | Msa0392570:intron | 55.0% |
| ACACTCTACCTGAGGATGCG+AGG | - | chr3_2:5787155-5787174 | Msa0392570:CDS | 55.0% | |
| ! | GGTGGCGGTTGTGCATTTGA+AGG | + | chr3_2:5787681-5787700 | None:intergenic | 55.0% |
| TTCCCCAATCTCCACCGACA+AGG | - | chr3_2:5787829-5787848 | Msa0392570:CDS | 55.0% | |
| TCCCCAATCTCCACCGACAA+GGG | - | chr3_2:5787830-5787849 | Msa0392570:CDS | 55.0% | |
| ACCCTTGTCGGTGGAGATTG+GGG | + | chr3_2:5787834-5787853 | None:intergenic | 55.0% | |
| CTACCCTTGTCGGTGGAGAT+TGG | + | chr3_2:5787836-5787855 | None:intergenic | 55.0% | |
| ATCTCCACCGACAAGGGTAG+TGG | - | chr3_2:5787836-5787855 | Msa0392570:CDS | 55.0% | |
| ACATCCACTACCCTTGTCGG+TGG | + | chr3_2:5787843-5787862 | None:intergenic | 55.0% | |
| GGGGTTTCAGCATGGATCTC+AGG | + | chr3_2:5788080-5788099 | None:intergenic | 55.0% | |
| !! | TCTAGCTGGTTGAGTTGGGG+GGG | + | chr3_2:5788099-5788118 | None:intergenic | 55.0% |
| !! | GTCTAGCTGGTTGAGTTGGG+GGG | + | chr3_2:5788100-5788119 | None:intergenic | 55.0% |
| !! | GGTCTAGCTGGTTGAGTTGG+GGG | + | chr3_2:5788101-5788120 | None:intergenic | 55.0% |
| TCCTACCCCTCAAATGGAGC+AGG | - | chr3_2:5788303-5788322 | Msa0392570:CDS | 55.0% | |
| CCTACCCCTCAAATGGAGCA+GGG | - | chr3_2:5788304-5788323 | Msa0392570:CDS | 55.0% | |
| CCCTGTCCTTGCTCCATTTG+AGG | + | chr3_2:5788343-5788362 | None:intergenic | 55.0% | |
| AATGGAGCAAGGACAGGGTC+AGG | - | chr3_2:5788345-5788364 | Msa0392570:CDS | 55.0% | |
| CAAGGACAGGGTCAGGATCA+GGG | - | chr3_2:5788382-5788401 | Msa0392570:CDS | 55.0% | |
| GCGAAAGGACGTCACTGCTT+TGG | - | chr3_2:5788618-5788637 | Msa0392570:intron | 55.0% | |
| ACCTCACTTGGTCATCTCCG+AGG | - | chr3_2:5788835-5788854 | Msa0392570:intron | 55.0% | |
| TCCTCGGAGATGACCAAGTG+AGG | + | chr3_2:5788839-5788858 | None:intergenic | 55.0% | |
| TGAGGATGCGAGGCAAGCAC+CGG | - | chr3_2:5787165-5787184 | Msa0392570:CDS | 60.0% | |
| GAGGGATCGCGAAGAGCTTC+CGG | + | chr3_2:5787975-5787994 | None:intergenic | 60.0% | |
| GAGTTGGGGGGGTTTCAGCA+TGG | + | chr3_2:5788088-5788107 | None:intergenic | 60.0% | |
| !! | GCGCCACCATGAGAAGCATC+TGG | + | chr3_2:5788131-5788150 | None:intergenic | 60.0% |
| ! | TCTCATGGTGGCGCCTCAGA+TGG | - | chr3_2:5788137-5788156 | Msa0392570:CDS | 60.0% |
| CCCTGCTCCATTTGAGGGGT+AGG | + | chr3_2:5788307-5788326 | None:intergenic | 60.0% | |
| GCAAGGACAGGGTCAGGATC+AGG | - | chr3_2:5788381-5788400 | Msa0392570:CDS | 60.0% | |
| AGGGTCAGGATCAGGGTGAG+AGG | - | chr3_2:5788389-5788408 | Msa0392570:CDS | 60.0% | |
| ! | ACGTCACTGCTTTGGGCGCA+TGG | - | chr3_2:5788626-5788645 | Msa0392570:intron | 60.0% |
| ! | CGTCACTGCTTTGGGCGCAT+GGG | - | chr3_2:5788627-5788646 | Msa0392570:intron | 60.0% |
| GGTGCTTGCCTCGCATCCTC+AGG | + | chr3_2:5787166-5787185 | None:intergenic | 65.0% | |
| GGATCGCGAAGAGCTTCCGG+TGG | + | chr3_2:5787972-5787991 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 5785491 | 5790790 | 5785491 | ID=Msa0392570;Name=Msa0392570 |
| chr3_2 | mRNA | 5785491 | 5790790 | 5785491 | ID=Msa0392570-mRNA-1;Parent=Msa0392570;Name=Msa0392570-mRNA-1;_AED=0.07;_eAED=0.07;_QI=71|1|0.92|1|1|1|13|212|694 |
| chr3_2 | exon | 5785491 | 5785801 | 5785491 | ID=Msa0392570-mRNA-1:exon:1478;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5786038 | 5786173 | 5786038 | ID=Msa0392570-mRNA-1:exon:1477;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5786392 | 5786440 | 5786392 | ID=Msa0392570-mRNA-1:exon:1476;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5786568 | 5786610 | 5786568 | ID=Msa0392570-mRNA-1:exon:1475;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5786996 | 5787498 | 5786996 | ID=Msa0392570-mRNA-1:exon:1474;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5787578 | 5787708 | 5787578 | ID=Msa0392570-mRNA-1:exon:1473;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5787811 | 5788030 | 5787811 | ID=Msa0392570-mRNA-1:exon:1472;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5788108 | 5788457 | 5788108 | ID=Msa0392570-mRNA-1:exon:1471;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5788551 | 5788618 | 5788551 | ID=Msa0392570-mRNA-1:exon:1470;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5788715 | 5788764 | 5788715 | ID=Msa0392570-mRNA-1:exon:1469;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5788853 | 5788899 | 5788853 | ID=Msa0392570-mRNA-1:exon:1468;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5789021 | 5789285 | 5789021 | ID=Msa0392570-mRNA-1:exon:1467;Parent=Msa0392570-mRNA-1 |
| chr3_2 | exon | 5790596 | 5790790 | 5790596 | ID=Msa0392570-mRNA-1:exon:1466;Parent=Msa0392570-mRNA-1 |
| chr3_2 | five_prime_UTR | 5790720 | 5790790 | 5790720 | ID=Msa0392570-mRNA-1:five_prime_utr;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5790596 | 5790719 | 5790596 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5789021 | 5789285 | 5789021 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5788853 | 5788899 | 5788853 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5788715 | 5788764 | 5788715 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5788551 | 5788618 | 5788551 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5788108 | 5788457 | 5788108 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5787811 | 5788030 | 5787811 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5787578 | 5787708 | 5787578 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5786996 | 5787498 | 5786996 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5786568 | 5786610 | 5786568 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5786392 | 5786440 | 5786392 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5786038 | 5786173 | 5786038 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | CDS | 5785703 | 5785801 | 5785703 | ID=Msa0392570-mRNA-1:cds;Parent=Msa0392570-mRNA-1 |
| chr3_2 | three_prime_UTR | 5785491 | 5785702 | 5785491 | ID=Msa0392570-mRNA-1:three_prime_utr;Parent=Msa0392570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
