AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1432060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1432060 MtrunA17_Chr7g0267981 93.489 599 10 2 1 570 1 599 0.0 1125
Msa1432060 MtrunA17_Chr7g0225851 56.979 609 101 23 1 570 1 487 0.0 537
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1432060 AT3G54750.4 41.503 612 266 9 23 569 5 589 6.54e-147 436
Msa1432060 AT3G54750.1 41.340 612 266 9 23 569 5 588 4.25e-146 434
Msa1432060 AT3G54750.2 41.340 612 266 9 23 569 5 588 4.25e-146 434
Msa1432060 AT3G54750.5 41.436 613 265 10 23 569 5 589 9.67e-145 431
Msa1432060 AT3G54750.3 41.436 613 265 10 23 569 5 589 9.67e-145 431

Find 154 sgRNAs with CRISPR-Local

Find 571 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACACGCTCTTACAATTT+TGG 0.141532 tig0026928:-50607 None:intergenic
TTAAGAAACCAGGATTATTT+AGG 0.170968 tig0026928:+42434 Msa1432060:CDS
TTTATGTAGCATTGAAATTA+AGG 0.194384 tig0026928:+49403 Msa1432060:CDS
TAATTTAAAATGAAAATAAT+TGG 0.218201 tig0026928:-41688 None:intergenic
TCAGCTGTTGATAGATCTTC+TGG 0.224294 tig0026928:+42932 Msa1432060:CDS
CGGCTAATAATGGGTCTATT+TGG 0.239647 tig0026928:+49342 Msa1432060:CDS
CTGAAAACCAGCAATGATTC+TGG 0.249867 tig0026928:-48786 None:intergenic
TTGACCTATTACTGAATTAC+AGG 0.250085 tig0026928:+48835 Msa1432060:CDS
GAAGATATTGCGGCTAATAA+TGG 0.271803 tig0026928:+49332 Msa1432060:CDS
AGTAGCTACTTTCGCCATTC+AGG 0.272636 tig0026928:-42029 None:intergenic
CAAATGACAGAAATCATATT+TGG 0.275720 tig0026928:-50659 None:intergenic
GGTAAGCATTTAAATAAATT+AGG 0.288377 tig0026928:-50535 None:intergenic
ATTCGAAACGGTGTTTCTAT+TGG 0.298594 tig0026928:+42082 Msa1432060:CDS
CTTACCTGTAATTCAGTAAT+AGG 0.301616 tig0026928:-48839 None:intergenic
GCAAGTTACAACTGAGGATT+TGG 0.306169 tig0026928:+48042 Msa1432060:CDS
GTTTCGAATTCGGTGAGAAC+TGG 0.310383 tig0026928:-42068 None:intergenic
AAATAGAATTGGAGTTCTTA+AGG 0.314290 tig0026928:+45107 Msa1432060:intron
TAGAAACACCGTTTCGAATT+CGG 0.316399 tig0026928:-42078 None:intergenic
ATAAGCATTGCATGAACATT+TGG 0.321160 tig0026928:-46775 None:intergenic
TAAGAAACCAGGATTATTTA+GGG 0.327895 tig0026928:+42435 Msa1432060:CDS
CAGTGAACATCACAATAAAC+TGG 0.329835 tig0026928:-46731 None:intergenic
ACCTGGCAAGAAGGCTCCTT+TGG 0.335017 tig0026928:+43206 Msa1432060:CDS
TTACTAGTTTGCTCCATAGA+TGG 0.340079 tig0026928:-42662 None:intergenic
GGCATCAATATGATGAAAAT+AGG 0.354374 tig0026928:-50514 None:intergenic
ATTCAATCTCCCGCTACGTT+AGG 0.360857 tig0026928:+41834 Msa1432060:five_prime_UTR
TACCAAGGATGGTGTGTTGC+AGG 0.368424 tig0026928:+42850 Msa1432060:CDS
CTTGGACCGCGTGGTGATAA+TGG 0.369016 tig0026928:+43105 Msa1432060:CDS
GAAGACGTAACTGCAGCTTC+TGG 0.379959 tig0026928:-50400 None:intergenic
AGCCCATCAATGCACATATA+CGG 0.387724 tig0026928:-49454 None:intergenic
CAGCCGTATATGTGCATTGA+TGG 0.392186 tig0026928:+49451 Msa1432060:CDS
AAGATATTGCGGCTAATAAT+GGG 0.398168 tig0026928:+49333 Msa1432060:CDS
TGTTCAGGAAAATCCATCTA+TGG 0.404540 tig0026928:+42649 Msa1432060:intron
AGGGGATACTATTCGCATAC+TGG 0.405603 tig0026928:-43244 None:intergenic
TAAGGAAACGGCAAGTGGCT+TGG 0.428810 tig0026928:+45125 Msa1432060:CDS
CAGTTTATTGTGATGTTCAC+TGG 0.431777 tig0026928:+46732 Msa1432060:CDS
TTCAATCTCCCGCTACGTTA+GGG 0.433085 tig0026928:+41835 Msa1432060:five_prime_UTR
CCCGATGGAATCTTAAACCT+CGG 0.436019 tig0026928:-42508 None:intergenic
CGCCTGCAACACACCATCCT+TGG 0.438483 tig0026928:-42852 None:intergenic
AGAAGGCGGAAGAACAGATT+GGG 0.438610 tig0026928:-44953 None:intergenic
TAATAGCCCAGAATCATTGC+TGG 0.440353 tig0026928:+48779 Msa1432060:CDS
ATGGGAAGAACCGAGAAAAT+CGG 0.441212 tig0026928:-41783 None:intergenic
TTTGCACAAGGATCATTAGA+TGG 0.442251 tig0026928:+49377 Msa1432060:CDS
GCAGAACTTTGGAACGGAAC+AGG 0.445768 tig0026928:-49020 None:intergenic
AAGGAAACGGCAAGTGGCTT+GGG 0.452290 tig0026928:+45126 Msa1432060:CDS
GTGTCTCTGAGGTGGACAAT+AGG 0.452787 tig0026928:+42410 Msa1432060:intron
AACTAACTTTGCTGAACCAC+TGG 0.455460 tig0026928:-42311 None:intergenic
TGGGAAGAACCGAGAAAATC+GGG 0.459046 tig0026928:-41782 None:intergenic
GCCTCTTTGCCGTTCAAAAG+AGG 0.462275 tig0026928:+48018 Msa1432060:CDS
AGAGACAGCAAGGGGTTTCA+CGG 0.466552 tig0026928:+42723 Msa1432060:CDS
ATGACCTCTATTACATGCTT+CGG 0.466766 tig0026928:+45161 Msa1432060:CDS
CCGAGGTTTAAGATTCCATC+GGG 0.467403 tig0026928:+42508 Msa1432060:CDS
TTCACTGGTGGCGATGGCTC+TGG 0.470881 tig0026928:+46747 Msa1432060:CDS
AATTGGAGTTCTTAAGGAAA+CGG 0.472450 tig0026928:+45113 Msa1432060:CDS
CTCAACACTGATATGATAGA+AGG 0.475132 tig0026928:-44970 None:intergenic
AATATGATTTCTGTCATTTG+AGG 0.477467 tig0026928:+50662 Msa1432060:three_prime_UTR
TGAAAACCAGCAATGATTCT+GGG 0.481029 tig0026928:-48785 None:intergenic
TCCAAAGGAGCCTTCTTGCC+AGG 0.481682 tig0026928:-43207 None:intergenic
GATAAGTCAGAGCAGAACTT+TGG 0.481909 tig0026928:-49031 None:intergenic
CTCTGAAGGGAGGAGCTTTG+AGG 0.485787 tig0026928:+49475 Msa1432060:CDS
TAGAAGGCGGAAGAACAGAT+TGG 0.489932 tig0026928:-44954 None:intergenic
AGAGAATGACCTTGAGCGCC+GGG 0.492279 tig0026928:-48748 None:intergenic
AGTCGTGTATCATTGTATCT+AGG 0.496935 tig0026928:-42460 None:intergenic
TTTCGAATTCGGTGAGAACT+GGG 0.497996 tig0026928:-42067 None:intergenic
AGCGGTGTCGTATCAGTGAA+TGG 0.499328 tig0026928:-41802 None:intergenic
TAACAATGATCTAAAACCTC+TGG 0.503353 tig0026928:-46811 None:intergenic
TCCACGTCCATCGGATGAAT+CGG 0.504224 tig0026928:-43136 None:intergenic
ATTACAAATACATGACTTGT+GGG 0.509580 tig0026928:-50629 None:intergenic
TTGGAGAAATCTGCTACCTC+AGG 0.513340 tig0026928:+42821 Msa1432060:CDS
AAATCTGAATCAAAAGCTGC+TGG 0.516205 tig0026928:+50337 Msa1432060:CDS
AGAGGAAGAATTTACTGCAA+TGG 0.517278 tig0026928:-43172 None:intergenic
TAGTTAATAGTTGATGTATG+TGG 0.518916 tig0026928:-50704 None:intergenic
TTGAGAGGACTAGCCTCGCT+TGG 0.519123 tig0026928:+43087 Msa1432060:CDS
TGCTGAATCTCCACGTCCAT+CGG 0.520790 tig0026928:-43145 None:intergenic
CAAAGCAACATTCAGTCCAC+TGG 0.521488 tig0026928:-50299 None:intergenic
CTAGGCGCCCTAAATAATCC+TGG 0.524786 tig0026928:-42442 None:intergenic
ATCAACAGCTGAAGAAAGAT+CGG 0.533488 tig0026928:-42921 None:intergenic
GAAGAATTTACTGCAATGGT+TGG 0.533738 tig0026928:-43168 None:intergenic
GCTGGCAGTGAAAGCTTGCG+AGG 0.536250 tig0026928:+50355 Msa1432060:CDS
AGGATACATTTATTCCACCT+TGG 0.536590 tig0026928:+49423 Msa1432060:CDS
TCTTTCCTAGATTAAATGCA+TGG 0.539258 tig0026928:+49295 Msa1432060:intron
TAAATGCTTACCCTTCCGAT+TGG 0.539310 tig0026928:+50546 Msa1432060:three_prime_UTR
CAGAGAATGACCTTGAGCGC+CGG 0.540235 tig0026928:-48749 None:intergenic
GTTTAAGATTCCATCGGGGA+AGG 0.546998 tig0026928:+42513 Msa1432060:CDS
TCCTCTGAATGTCATATACC+TGG 0.554170 tig0026928:+43189 Msa1432060:CDS
GAACTGGGAGGCATAGCACT+TGG 0.555818 tig0026928:-42052 None:intergenic
GGAACAGGAGAACACAAGAC+AGG 0.558626 tig0026928:-49005 None:intergenic
ATGTGTAAATACCATAAAAG+AGG 0.561034 tig0026928:-45198 None:intergenic
GCGGTGTCGTATCAGTGAAT+GGG 0.562441 tig0026928:-41801 None:intergenic
TATTTGCAGTGTCTCTGAGG+TGG 0.563464 tig0026928:+42402 Msa1432060:intron
GCCGAGGTTTAAGATTCCAT+CGG 0.568404 tig0026928:+42507 Msa1432060:CDS
TTCGAAGGAGACCAATCGGA+AGG 0.568594 tig0026928:-50557 None:intergenic
TATTACAAATACATGACTTG+TGG 0.570122 tig0026928:-50630 None:intergenic
ACCGATTCATCCGATGGACG+TGG 0.572736 tig0026928:+43135 Msa1432060:CDS
GTGACTGAACCGGTCTCCAG+TGG 0.576955 tig0026928:+50283 Msa1432060:CDS
TGTGCATTGATGGGCTCTGA+AGG 0.577752 tig0026928:+49461 Msa1432060:CDS
TGCTTGTTGTAATTCCTGAA+TGG 0.578304 tig0026928:+42015 Msa1432060:exon
TCTTCCGAAGCATGTAATAG+AGG 0.579226 tig0026928:-45165 None:intergenic
GTGATGTTCACTGGTGGCGA+TGG 0.579761 tig0026928:+46741 Msa1432060:CDS
TTATATTTGCAGTGTCTCTG+AGG 0.580757 tig0026928:+42399 Msa1432060:intron
ATGTCATATACCTGGCAAGA+AGG 0.580964 tig0026928:+43197 Msa1432060:CDS
TTGAGCTCATCAACTGCAGA+AGG 0.583441 tig0026928:+44988 Msa1432060:CDS
GCCAGGTATATGACATTCAG+AGG 0.584588 tig0026928:-43190 None:intergenic
CGTGACCTCACTGTCTAGTG+TGG 0.586021 tig0026928:+48977 Msa1432060:CDS
GACAATAGGTTTAAGAAACC+AGG 0.586658 tig0026928:+42424 Msa1432060:CDS
TCAGGAGAGGTTACCAAGGA+TGG 0.588304 tig0026928:+42839 Msa1432060:CDS
AGATTGAATTCGACGAAAAG+CGG 0.589352 tig0026928:-41820 None:intergenic
AGTGGCAGCAACAATGTGCA+TGG 0.589761 tig0026928:+48807 Msa1432060:CDS
ACATTCAGTCCACTGGAGAC+CGG 0.590911 tig0026928:-50292 None:intergenic
CATGTAATAGAGGTCATGAA+AGG 0.594277 tig0026928:-45155 None:intergenic
AAAAGTGTAAAGTACTGTGA+TGG 0.597080 tig0026928:+50442 Msa1432060:CDS
AAGGGAGGAGCTTTGAGGCA+AGG 0.597578 tig0026928:+49480 Msa1432060:CDS
AGCCGTATATGTGCATTGAT+GGG 0.598883 tig0026928:+49452 Msa1432060:CDS
ATCACCACGCGGTCCAAGCG+AGG 0.599331 tig0026928:-43100 None:intergenic
CAAGGATGGTGTGTTGCAGG+CGG 0.599736 tig0026928:+42853 Msa1432060:CDS
AAGGATGGTGTGTTGCAGGC+GGG 0.603714 tig0026928:+42854 Msa1432060:CDS
ATACATCAACTATTAACTAA+CGG 0.605716 tig0026928:+50708 Msa1432060:three_prime_UTR
AGTTCTCACCGAATTCGAAA+CGG 0.607334 tig0026928:+42070 Msa1432060:CDS
TGCAGCTTCTGGAATGCCAA+AGG 0.610616 tig0026928:-50389 None:intergenic
AAACGTACCCTAAGTTCTGA+AGG 0.611789 tig0026928:-42118 None:intergenic
GAGAAGAGCTGAAGATATTG+CGG 0.612061 tig0026928:+49322 Msa1432060:CDS
TATATTTCTCAGTCAACCAG+AGG 0.614438 tig0026928:+46795 Msa1432060:CDS
ATGCTTCGGAAGAACATATG+TGG 0.616374 tig0026928:+45175 Msa1432060:CDS
CATATACGGCTGATAATCCA+AGG 0.618143 tig0026928:-49440 None:intergenic
TCGGTGGTTAAGAGACAGCA+AGG 0.620054 tig0026928:+42713 Msa1432060:CDS
CGGTGGTTAAGAGACAGCAA+GGG 0.621190 tig0026928:+42714 Msa1432060:CDS
TTAGCTACCGATTCATCCGA+TGG 0.624246 tig0026928:+43129 Msa1432060:CDS
AAAGATAACGAGTTTGCACA+AGG 0.627297 tig0026928:+49365 Msa1432060:CDS
AGCTCATCAACTGCAGAAGG+AGG 0.628000 tig0026928:+44991 Msa1432060:CDS
ATCGGGGAAGGAAAATGTGA+AGG 0.629437 tig0026928:+42525 Msa1432060:CDS
ATCCTTGGTAACCTCTCCTG+AGG 0.635914 tig0026928:-42837 None:intergenic
GAAGGCGGAAGAACAGATTG+GGG 0.643801 tig0026928:-44952 None:intergenic
ACTGGATTGAGAACATTCAT+CGG 0.646151 tig0026928:-42293 None:intergenic
AGTGAACATCACAATAAACT+GGG 0.650061 tig0026928:-46730 None:intergenic
AACACTGATATGATAGAAGG+CGG 0.654535 tig0026928:-44967 None:intergenic
GTCAGAGCAGAACTTTGGAA+CGG 0.655766 tig0026928:-49026 None:intergenic
TCGAAGGAGACCAATCGGAA+GGG 0.655768 tig0026928:-50556 None:intergenic
TTTATTGTGATGTTCACTGG+TGG 0.661733 tig0026928:+46735 Msa1432060:CDS
GAAATCTGCTACCTCAGGAG+AGG 0.663455 tig0026928:+42826 Msa1432060:CDS
GTTCTTAAGGAAACGGCAAG+TGG 0.664215 tig0026928:+45120 Msa1432060:CDS
CATTGATGGGCTCTGAAGGG+AGG 0.664242 tig0026928:+49465 Msa1432060:CDS
TGGAGCAGTAAATATTGACA+TGG 0.669718 tig0026928:+42952 Msa1432060:CDS
GGTGGTTAAGAGACAGCAAG+GGG 0.670056 tig0026928:+42715 Msa1432060:CDS
GATGAATGTTCTCAATCCAG+TGG 0.671105 tig0026928:+42295 Msa1432060:CDS
GTGCATTGATGGGCTCTGAA+GGG 0.672288 tig0026928:+49462 Msa1432060:CDS
ATTGAAGCGAGAAAGTGTCG+TGG 0.691528 tig0026928:+42264 Msa1432060:CDS
TACCTCAGGAGAGGTTACCA+AGG 0.699417 tig0026928:+42835 Msa1432060:CDS
AGAGGAGCAAGTTACAACTG+AGG 0.701608 tig0026928:+48036 Msa1432060:CDS
CGAATTCGGTGAGAACTGGG+AGG 0.706927 tig0026928:-42064 None:intergenic
ATTGAGAACATTCATCGGTG+AGG 0.709288 tig0026928:-42288 None:intergenic
TTGAGTGTACCCTAACGTAG+CGG 0.711398 tig0026928:-41844 None:intergenic
AACGTCCACACTAGACAGTG+AGG 0.727809 tig0026928:-48982 None:intergenic
ATACGGCTGATAATCCAAGG+TGG 0.770014 tig0026928:-49437 None:intergenic
CGAGGTTTAAGATTCCATCG+GGG 0.798890 tig0026928:+42509 Msa1432060:CDS
GCTAATCCATTATCACCACG+CGG 0.807615 tig0026928:-43111 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAAATAATTAAGAAG+CGG - tig0026928:42344-42363 None:intergenic 10.0%
!!! AAAAAAATCTTTTTTATAGT+TGG - tig0026928:43360-43379 None:intergenic 10.0%
!!! AAAATTTTACAAAAAAAAAG+TGG + tig0026928:43492-43511 Msa1432060:intron 10.0%
!! ATAATCATAAACAAATTAAA+TGG - tig0026928:43723-43742 None:intergenic 10.0%
!!! ATAATTTTTATTGTTGAAAA+AGG + tig0026928:43750-43769 Msa1432060:intron 10.0%
!! ATTGATATATTTATTTGTAT+TGG - tig0026928:43813-43832 None:intergenic 10.0%
!! TATTTAATAAAAAGGAAAAA+TGG - tig0026928:45092-45111 None:intergenic 10.0%
!! TTAATTTAATTATTAACACA+AGG - tig0026928:46242-46261 None:intergenic 10.0%
!!! ATTTTCATCATAATAATAAA+CGG - tig0026928:46523-46542 None:intergenic 10.0%
!!! ATTTTAGTAATAGAAAAAAT+GGG - tig0026928:49718-49737 None:intergenic 10.0%
!!! AATTTTAGTAATAGAAAAAA+TGG - tig0026928:49719-49738 None:intergenic 10.0%
!!! TTTTTCTATTACTAAAATTT+CGG + tig0026928:49720-49739 Msa1432060:intron 10.0%
!!! CCTAAAAAATTATAATTTGT+GGG - tig0026928:43429-43448 None:intergenic 15.0%
!! ACCTAAAAAATTATAATTTG+TGG - tig0026928:43430-43449 None:intergenic 15.0%
!! TAATCTCTAACAAAAAATTA+AGG + tig0026928:43530-43549 Msa1432060:intron 15.0%
!!! TTTTTGCAACTAAATTTATT+TGG + tig0026928:43869-43888 Msa1432060:intron 15.0%
!!! TTTTGCAACTAAATTTATTT+GGG + tig0026928:43870-43889 Msa1432060:intron 15.0%
!! AAAAAATATTATTCATGAAG+TGG - tig0026928:43945-43964 None:intergenic 15.0%
!!! CATGAATAATATTTTTTTTG+AGG + tig0026928:43948-43967 Msa1432060:intron 15.0%
!!! AATTAAATGATCTTTTATAC+AGG - tig0026928:44129-44148 None:intergenic 15.0%
!! AACAAATCAAATAAATAAGA+GGG - tig0026928:44718-44737 None:intergenic 15.0%
!! AAACAAATCAAATAAATAAG+AGG - tig0026928:44719-44738 None:intergenic 15.0%
!!! TCCTTTTTATTAAATAGAAT+TGG + tig0026928:45096-45115 Msa1432060:intron 15.0%
!! TCCAATTCTATTTAATAAAA+AGG - tig0026928:45100-45119 None:intergenic 15.0%
!! AAATGTTTGACTAATAAATT+GGG - tig0026928:45390-45409 None:intergenic 15.0%
!! AAAATGTTTGACTAATAAAT+TGG - tig0026928:45391-45410 None:intergenic 15.0%
!!! TTGAAAGTTTCTAAAATTTA+AGG - tig0026928:45524-45543 None:intergenic 15.0%
!!! TTTTCATCATAATAATAAAC+GGG - tig0026928:46522-46541 None:intergenic 15.0%
!!! TAATCATATTTTTTCATTGA+TGG + tig0026928:46981-47000 Msa1432060:intron 15.0%
!!! AAAATGTAGTTTTTACAAAT+CGG + tig0026928:47242-47261 Msa1432060:intron 15.0%
!! AGTTAATACTAATACTAATT+AGG - tig0026928:48339-48358 None:intergenic 15.0%
!! TTAGTATTAACTGAATTATT+TGG + tig0026928:48347-48366 Msa1432060:intron 15.0%
!! AACAACATATAATTAAAAGA+TGG - tig0026928:48405-48424 None:intergenic 15.0%
!! ATATAAATAGAGCTTAAATA+TGG - tig0026928:48687-48706 None:intergenic 15.0%
!! ATATTTAAGCTCTATTTATA+TGG + tig0026928:48686-48705 Msa1432060:intron 15.0%
!!! ATTGATTTATGTTTTTCATT+TGG + tig0026928:48714-48733 Msa1432060:intron 15.0%
!! TTATTTAAATTGACAAATTG+CGG - tig0026928:49127-49146 None:intergenic 15.0%
!! TAAAATGTAATTGTTTAGAT+AGG + tig0026928:49541-49560 Msa1432060:intron 15.0%
!!! GGTTTATTGAATTTTATTTT+AGG + tig0026928:49639-49658 Msa1432060:intron 15.0%
!!! TTTTAGTAATAGAAAAAATG+GGG - tig0026928:49717-49736 None:intergenic 15.0%
!!! TTTTCTATTACTAAAATTTC+GGG + tig0026928:49721-49740 Msa1432060:intron 15.0%
!! TGTATTATTACAAATAAAGA+TGG + tig0026928:49860-49879 Msa1432060:intron 15.0%
!! GTATTATTACAAATAAAGAT+GGG + tig0026928:49861-49880 Msa1432060:intron 15.0%
!!! TTATAACTGCATTTTAACTT+AGG + tig0026928:42152-42171 Msa1432060:intron 20.0%
!!! TATAACTGCATTTTAACTTA+GGG + tig0026928:42153-42172 Msa1432060:intron 20.0%
!!! CCCACAAATTATAATTTTTT+AGG + tig0026928:43426-43445 Msa1432060:intron 20.0%
!! TAAAAAACTGAGACAAAAAT+TGG - tig0026928:43473-43492 None:intergenic 20.0%
!! GACTAAAATTAACAAATCTT+AGG + tig0026928:43552-43571 Msa1432060:intron 20.0%
!! AGACAATTATTGATGTAATT+GGG - tig0026928:43632-43651 None:intergenic 20.0%
!! TAGCTCAATGTTTATTATTT+AGG + tig0026928:43894-43913 Msa1432060:intron 20.0%
!! AGCTCAATGTTTATTATTTA+GGG + tig0026928:43895-43914 Msa1432060:intron 20.0%
!!! ATAAGTGTTTTTATTTGCTT+AGG - tig0026928:44038-44057 None:intergenic 20.0%
!!! ATTCTGAAATAACATGAAAT+TGG - tig0026928:44368-44387 None:intergenic 20.0%
!! ATATGAATGAATTGTTATGT+GGG - tig0026928:44636-44655 None:intergenic 20.0%
!! ATTTCATACTCCTAATTTAT+AGG + tig0026928:45345-45364 Msa1432060:intron 20.0%
!! AATGTTTGACTAATAAATTG+GGG - tig0026928:45389-45408 None:intergenic 20.0%
!!! GTTTCTAAAATTTAAGGTTT+GGG - tig0026928:45518-45537 None:intergenic 20.0%
!!! AGTTTCTAAAATTTAAGGTT+TGG - tig0026928:45519-45538 None:intergenic 20.0%
!! TGGATAGTTATTAGTAATTT+AGG + tig0026928:46039-46058 Msa1432060:intron 20.0%
!!! ATATGAGACTTTAAGATATA+TGG + tig0026928:46310-46329 Msa1432060:intron 20.0%
!! AAATCGTTAACTCATTAATT+CGG + tig0026928:47483-47502 Msa1432060:intron 20.0%
!!! CATATCATTTGTTTTTTTGA+TGG + tig0026928:48125-48144 Msa1432060:intron 20.0%
!!! TTTTTTTTTGACAAGTATAC+TGG + tig0026928:48496-48515 Msa1432060:intron 20.0%
!! ATTATTAAATGAGCTAGAAA+AGG - tig0026928:49227-49246 None:intergenic 20.0%
!! AAAAATATCAACATAGAAAG+TGG - tig0026928:49269-49288 None:intergenic 20.0%
!!! TTTATGTAGCATTGAAATTA+AGG + tig0026928:49403-49422 Msa1432060:CDS 20.0%
!! AATATGTGATTAAGAAAACT+TGG + tig0026928:49603-49622 Msa1432060:intron 20.0%
!! ATATGTGATTAAGAAAACTT+GGG + tig0026928:49604-49623 Msa1432060:intron 20.0%
!! ATATATTATTTACCTGGAAA+TGG + tig0026928:49686-49705 Msa1432060:intron 20.0%
!! TTTCTATTACTAAAATTTCG+GGG + tig0026928:49722-49741 Msa1432060:intron 20.0%
!! GGTAAGCATTTAAATAAATT+AGG - tig0026928:50538-50557 None:intergenic 20.0%
!! ATACATCAACTATTAACTAA+CGG + tig0026928:50708-50727 Msa1432060:three_prime_UTR 20.0%
! TTAAGAAACCAGGATTATTT+AGG + tig0026928:42434-42453 Msa1432060:CDS 25.0%
! TAAGAAACCAGGATTATTTA+GGG + tig0026928:42435-42454 Msa1432060:CDS 25.0%
! AAGTAAACAAATATTAGTCG+TGG - tig0026928:42569-42588 None:intergenic 25.0%
! CATAGTAACAATATCAATCT+TGG - tig0026928:42631-42650 None:intergenic 25.0%
! TTGATATTGTTACTATGTTC+AGG + tig0026928:42634-42653 Msa1432060:intron 25.0%
! ATAAACTATGAAGAAAAGGT+TGG - tig0026928:42993-43012 None:intergenic 25.0%
! GAAGATAAACTATGAAGAAA+AGG - tig0026928:42997-43016 None:intergenic 25.0%
!!! TGCTGAAAAAAACGTTTTTT+AGG + tig0026928:43056-43075 Msa1432060:intron 25.0%
!!! GCTGAAAAAAACGTTTTTTA+GGG + tig0026928:43057-43076 Msa1432060:intron 25.0%
!!! GTTTTTAAAGTAAGATCCAA+AGG - tig0026928:43225-43244 None:intergenic 25.0%
! CCAATATATTAGTCAATCAA+AGG - tig0026928:43291-43310 None:intergenic 25.0%
! CCTTTGATTGACTAATATAT+TGG + tig0026928:43288-43307 Msa1432060:intron 25.0%
! CAGACAATTATTGATGTAAT+TGG - tig0026928:43633-43652 None:intergenic 25.0%
!!! TTGTATTGGTTTGATACTTT+CGG - tig0026928:43799-43818 None:intergenic 25.0%
! AATATTATTCATGAAGTGGT+CGG - tig0026928:43941-43960 None:intergenic 25.0%
!! TATCTATTTTATAGATGCAC+TGG + tig0026928:44225-44244 Msa1432060:intron 25.0%
! ACTTGATAAACATAACAGTT+AGG + tig0026928:44255-44274 Msa1432060:intron 25.0%
!! CAATTGATAATACAAACAAG+GGG - tig0026928:44291-44310 None:intergenic 25.0%
!! CCAATTGATAATACAAACAA+GGG - tig0026928:44292-44311 None:intergenic 25.0%
!! CCTTGTTTGTATTATCAATT+GGG + tig0026928:44290-44309 Msa1432060:intron 25.0%
! CATATGAATGAATTGTTATG+TGG - tig0026928:44637-44656 None:intergenic 25.0%
! TACATAACACAAAAACAGTA+GGG - tig0026928:44686-44705 None:intergenic 25.0%
! AAATCAAATAAATAAGAGGG+TGG - tig0026928:44715-44734 None:intergenic 25.0%
! AACATATGTATCGTAGAATT+AGG - tig0026928:44826-44845 None:intergenic 25.0%
! ATACATATGTTAGTTATGTG+TGG + tig0026928:44835-44854 Msa1432060:intron 25.0%
! AACATAAGGAAAATAGAGAA+AGG - tig0026928:45069-45088 None:intergenic 25.0%
! AAAAGGAAAAATGGAACATA+AGG - tig0026928:45083-45102 None:intergenic 25.0%
! AAATAGAATTGGAGTTCTTA+AGG + tig0026928:45107-45126 Msa1432060:intron 25.0%
! ATGTGTAAATACCATAAAAG+AGG - tig0026928:45201-45220 None:intergenic 25.0%
! TGCAACTAAACCTATAAATT+AGG - tig0026928:45358-45377 None:intergenic 25.0%
! TAATGAAGGGATTAAACTTT+GGG - tig0026928:45576-45595 None:intergenic 25.0%
! TTAATGAAGGGATTAAACTT+TGG - tig0026928:45577-45596 None:intergenic 25.0%
!! ATTTTGTTAGATAGAAGAGA+AGG + tig0026928:45747-45766 Msa1432060:intron 25.0%
! ATATAGGATTGGAGATTATT+TGG + tig0026928:46019-46038 Msa1432060:intron 25.0%
! AACCTAAAGAATATCAAACA+GGG + tig0026928:46188-46207 Msa1432060:intron 25.0%
! TTAATTATTAACACAAGGCA+GGG - tig0026928:46237-46256 None:intergenic 25.0%
! TTTAATTATTAACACAAGGC+AGG - tig0026928:46238-46257 None:intergenic 25.0%
! AACAGTGAAATTATATCAGA+TGG + tig0026928:46397-46416 Msa1432060:intron 25.0%
! ACAGTGAAATTATATCAGAT+GGG + tig0026928:46398-46417 Msa1432060:intron 25.0%
! AATGCTTAATCTAATACTCT+AGG + tig0026928:46448-46467 Msa1432060:intron 25.0%
!! GTGCTACTAAACTTATAAAT+CGG + tig0026928:46478-46497 Msa1432060:intron 25.0%
! TGCTACTAAACTTATAAATC+GGG + tig0026928:46479-46498 Msa1432060:intron 25.0%
! GATTTAGCAATAAAAGAAAC+AGG - tig0026928:46549-46568 None:intergenic 25.0%
! GAAAAAATATGATTATCCTG+AGG - tig0026928:46976-46995 None:intergenic 25.0%
!!! GGAGTATTTTCATAGAAATA+TGG - tig0026928:47007-47026 None:intergenic 25.0%
!! TTATCTGAAAAAAGTGTAGT+AGG + tig0026928:47041-47060 Msa1432060:intron 25.0%
! TTTGTGATTAAAAATGTCAG+TGG - tig0026928:47225-47244 None:intergenic 25.0%
! TGAAAATCATCATAGAATCA+AGG - tig0026928:47417-47436 None:intergenic 25.0%
! AATCGTTAACTCATTAATTC+GGG + tig0026928:47484-47503 Msa1432060:intron 25.0%
! GAAATATAACCACAAAAAAC+TGG - tig0026928:47685-47704 None:intergenic 25.0%
! ATTTAGCCAGATTAAACAAA+TGG + tig0026928:47708-47727 Msa1432060:intron 25.0%
! AAATGTCCATTTGTTTAATC+TGG - tig0026928:47717-47736 None:intergenic 25.0%
!! GATTAAACAAATGGACATTT+TGG + tig0026928:47717-47736 Msa1432060:intron 25.0%
! GATTGTACTTAAAATTGTGA+GGG - tig0026928:47873-47892 None:intergenic 25.0%
! AGATTGTACTTAAAATTGTG+AGG - tig0026928:47874-47893 None:intergenic 25.0%
! TTATCAAAAGAAGCAAAAAG+AGG - tig0026928:48277-48296 None:intergenic 25.0%
!! TCATATATTAAGAGTGTGTT+AGG - tig0026928:48452-48471 None:intergenic 25.0%
! TAGAAAAGGAAAAACAACTA+TGG - tig0026928:49213-49232 None:intergenic 25.0%
! CTCACTATATATTATTTACC+TGG + tig0026928:49680-49699 Msa1432060:intron 25.0%
! ACCTCATAAATTTAGTAGTA+CGG + tig0026928:49900-49919 Msa1432060:intron 25.0%
!!! TTTTTTGAATAAGAGTGTTG+AGG + tig0026928:49929-49948 Msa1432060:intron 25.0%
!! TTTTAGTGTACATGAACATA+GGG - tig0026928:50425-50444 None:intergenic 25.0%
!!! TTTTTAGTGTACATGAACAT+AGG - tig0026928:50426-50445 None:intergenic 25.0%
!! TGTTTTCATGAGATTATACA+GGG - tig0026928:50489-50508 None:intergenic 25.0%
!! TTGTTTTCATGAGATTATAC+AGG - tig0026928:50490-50509 None:intergenic 25.0%
!!! TACCTGTTTTTAATTTTCGA+AGG - tig0026928:50575-50594 None:intergenic 25.0%
!! ATTACAAATACATGACTTGT+GGG - tig0026928:50632-50651 None:intergenic 25.0%
! TATTACAAATACATGACTTG+TGG - tig0026928:50633-50652 None:intergenic 25.0%
! CAAATGACAGAAATCATATT+TGG - tig0026928:50662-50681 None:intergenic 25.0%
!! AATATGATTTCTGTCATTTG+AGG + tig0026928:50662-50681 Msa1432060:three_prime_UTR 25.0%
!! TAGTTAATAGTTGATGTATG+TGG - tig0026928:50707-50726 None:intergenic 25.0%
AAAAACACCTTCAGAACTTA+GGG + tig0026928:42111-42130 Msa1432060:CDS 30.0%
! TCATCTTCGATGTTTTATAC+TGG + tig0026928:42230-42249 Msa1432060:intron 30.0%
GAATTAGCAGCAAATTGAAA+CGG - tig0026928:42368-42387 None:intergenic 30.0%
!!! TGCTTCCATTTTTTCTACTT+CGG + tig0026928:42694-42713 Msa1432060:CDS 30.0%
!! AACAAAAGCATCATCAACAT+AGG - tig0026928:42795-42814 None:intergenic 30.0%
CTTCATATCAGATGTTTACT+AGG + tig0026928:43013-43032 Msa1432060:intron 30.0%
ACTAGGATGTATCATGAATA+TGG + tig0026928:43030-43049 Msa1432060:intron 30.0%
AAATCGCTATTTAGAAACGT+TGG + tig0026928:43587-43606 Msa1432060:intron 30.0%
AATCGCTATTTAGAAACGTT+GGG + tig0026928:43588-43607 Msa1432060:intron 30.0%
! TGTTTATTATTTAGGGTAGC+TGG + tig0026928:43902-43921 Msa1432060:intron 30.0%
!!! TATTTTTTTTGAGGTAGCCA+AGG + tig0026928:43957-43976 Msa1432060:intron 30.0%
! GTTTAAAATAGCAAATAGCG+TGG + tig0026928:44080-44099 Msa1432060:intron 30.0%
!! ACTTGTTACACAAAGTGTTT+TGG + tig0026928:44197-44216 Msa1432060:intron 30.0%
! CCCTTGTTTGTATTATCAAT+TGG + tig0026928:44289-44308 Msa1432060:intron 30.0%
! CCCAATTGATAATACAAACA+AGG - tig0026928:44293-44312 None:intergenic 30.0%
! TCTTTTTCTATCATCCTAAC+AGG + tig0026928:44563-44582 Msa1432060:intron 30.0%
AAAAAGTCATGTATCCTGTT+AGG - tig0026928:44580-44599 None:intergenic 30.0%
CTACATAACACAAAAACAGT+AGG - tig0026928:44687-44706 None:intergenic 30.0%
! CTCATATTTTCATTCCTGTA+AGG - tig0026928:44892-44911 None:intergenic 30.0%
TAAATGAGTTAAGTCAGAAG+GGG - tig0026928:45025-45044 None:intergenic 30.0%
GTAAATGAGTTAAGTCAGAA+GGG - tig0026928:45026-45045 None:intergenic 30.0%
TGTAAATGAGTTAAGTCAGA+AGG - tig0026928:45027-45046 None:intergenic 30.0%
AATTGGAGTTCTTAAGGAAA+CGG + tig0026928:45113-45132 Msa1432060:CDS 30.0%
TCCATCTGACAAAAAAGTAA+CGG - tig0026928:45226-45245 None:intergenic 30.0%
! TTTTTCCACTAAAAGATGTC+AGG + tig0026928:45451-45470 Msa1432060:intron 30.0%
TGTGCTTCATATTTAGTATG+TGG - tig0026928:45550-45569 None:intergenic 30.0%
ATCCCTTCATTAATGAAAGA+TGG + tig0026928:45584-45603 Msa1432060:intron 30.0%
TCCCTTCATTAATGAAAGAT+GGG + tig0026928:45585-45604 Msa1432060:intron 30.0%
TCCCATCTTTCATTAATGAA+GGG - tig0026928:45589-45608 None:intergenic 30.0%
TAACTAGTCATTGGATACAA+GGG - tig0026928:45645-45664 None:intergenic 30.0%
ATAACTAGTCATTGGATACA+AGG - tig0026928:45646-45665 None:intergenic 30.0%
TTAGAATGTGACTGACAATT+AGG - tig0026928:45786-45805 None:intergenic 30.0%
CTGAAATTGCTAGAATTGTA+TGG + tig0026928:45945-45964 Msa1432060:intron 30.0%
TCCAATCCTATATACAGATA+AGG - tig0026928:46012-46031 None:intergenic 30.0%
CTGTTTGATATTCTTTAGGT+TGG - tig0026928:46189-46208 None:intergenic 30.0%
CAACCTAAAGAATATCAAAC+AGG + tig0026928:46187-46206 Msa1432060:intron 30.0%
TAATTATTAACACAAGGCAG+GGG - tig0026928:46236-46255 None:intergenic 30.0%
TGTATTCTTAAGTAGTACAC+AGG + tig0026928:46287-46306 Msa1432060:intron 30.0%
! CTTAATCTAATACTCTAGGA+TGG + tig0026928:46452-46471 Msa1432060:intron 30.0%
GCTACTAAACTTATAAATCG+GGG + tig0026928:46480-46499 Msa1432060:intron 30.0%
ATCTGCATTTATAACACCAA+AGG - tig0026928:46580-46599 None:intergenic 30.0%
GTAGAAATGCACAAAGAAAT+TGG - tig0026928:46627-46646 None:intergenic 30.0%
AGTGAACATCACAATAAACT+GGG - tig0026928:46733-46752 None:intergenic 30.0%
! ATAAGCATTGCATGAACATT+TGG - tig0026928:46778-46797 None:intergenic 30.0%
! TAACAATGATCTAAAACCTC+TGG - tig0026928:46814-46833 None:intergenic 30.0%
CAGATAAATAATTGACCAGA+GGG - tig0026928:47028-47047 None:intergenic 30.0%
TCAGATAAATAATTGACCAG+AGG - tig0026928:47029-47048 None:intergenic 30.0%
!! TGAGAGTTTTTCAATAGATC+CGG + tig0026928:47152-47171 Msa1432060:intron 30.0%
!!! AGAAATGCGTACGATTTTTT+AGG + tig0026928:47313-47332 Msa1432060:intron 30.0%
!!! GAAATGCGTACGATTTTTTA+GGG + tig0026928:47314-47333 Msa1432060:intron 30.0%
CAAAACTGTGATTCAAATAG+CGG + tig0026928:47388-47407 Msa1432060:intron 30.0%
TTCAAATTCCAAACATTGCA+CGG - tig0026928:47580-47599 None:intergenic 30.0%
CATATCTCTTTCTCTTCAAT+GGG - tig0026928:47611-47630 None:intergenic 30.0%
CATTCGTTTACAACGTATAT+AGG - tig0026928:47743-47762 None:intergenic 30.0%
CTATATACGTTGTAAACGAA+TGG + tig0026928:47741-47760 Msa1432060:intron 30.0%
AAATTGTGAGGGATAAATTG+TGG - tig0026928:47862-47881 None:intergenic 30.0%
TAGTATATAAAGCCACATGA+AGG - tig0026928:47909-47928 None:intergenic 30.0%
ACTTTCATTGATGCATACTT+TGG + tig0026928:47934-47953 Msa1432060:intron 30.0%
! GAGTGATAAACTTTAAAAGC+AGG - tig0026928:48654-48673 None:intergenic 30.0%
TTGACCTATTACTGAATTAC+AGG + tig0026928:48835-48854 Msa1432060:CDS 30.0%
CTTACCTGTAATTCAGTAAT+AGG - tig0026928:48842-48861 None:intergenic 30.0%
ACAGAAGGAAAACAAAGTTA+AGG - tig0026928:49082-49101 None:intergenic 30.0%
ACATGGGAAAAATAAACAGA+AGG - tig0026928:49097-49116 None:intergenic 30.0%
AAATTGCGGAAAAACAACAT+GGG - tig0026928:49113-49132 None:intergenic 30.0%
TGCATTTAATCTAGGAAAGA+GGG - tig0026928:49295-49314 None:intergenic 30.0%
ATGCATTTAATCTAGGAAAG+AGG - tig0026928:49296-49315 None:intergenic 30.0%
TCTTTCCTAGATTAAATGCA+TGG + tig0026928:49295-49314 Msa1432060:intron 30.0%
AAGATATTGCGGCTAATAAT+GGG + tig0026928:49333-49352 Msa1432060:CDS 30.0%
!! AAACTTGGGTATGTTTTTGA+AGG + tig0026928:49618-49637 Msa1432060:intron 30.0%
TAGTAATAGAAAAAATGGGG+AGG - tig0026928:49714-49733 None:intergenic 30.0%
TGAGATTTATAGAGAATAGC+TGG + tig0026928:49750-49769 Msa1432060:intron 30.0%
TTACAAATAAAGATGGGTCT+TGG + tig0026928:49867-49886 Msa1432060:intron 30.0%
CCTCATAAATTTAGTAGTAC+GGG + tig0026928:49901-49920 Msa1432060:intron 30.0%
AAAGGATATGCTCATTGTAT+TGG - tig0026928:50081-50100 None:intergenic 30.0%
!!! CGATTCCAGTTTTAATTCAA+TGG - tig0026928:50203-50222 None:intergenic 30.0%
!! AAAAGTGTAAAGTACTGTGA+TGG + tig0026928:50442-50461 Msa1432060:CDS 30.0%
! GTTTTCATGAGATTATACAG+GGG - tig0026928:50488-50507 None:intergenic 30.0%
GGCATCAATATGATGAAAAT+AGG - tig0026928:50517-50536 None:intergenic 30.0%
CTCCTTCGAAAATTAAAAAC+AGG + tig0026928:50570-50589 Msa1432060:three_prime_UTR 30.0%
! TCACTTTATCCCGATTTTCT+CGG + tig0026928:41773-41792 Msa1432060:five_prime_UTR 35.0%
AGATTGAATTCGACGAAAAG+CGG - tig0026928:41823-41842 None:intergenic 35.0%
!! TGCTTGTTGTAATTCCTGAA+TGG + tig0026928:42015-42034 Msa1432060:exon 35.0%
TAGAAACACCGTTTCGAATT+CGG - tig0026928:42081-42100 None:intergenic 35.0%
! ATTCGAAACGGTGTTTCTAT+TGG + tig0026928:42082-42101 Msa1432060:CDS 35.0%
GAAAAACACCTTCAGAACTT+AGG + tig0026928:42110-42129 Msa1432060:CDS 35.0%
!!! CTGCATTTTAACTTAGGGTT+AGG + tig0026928:42158-42177 Msa1432060:intron 35.0%
TCTTCAATTGAAATGTGACG+CGG + tig0026928:42200-42219 Msa1432060:intron 35.0%
! TTCGATGTTTTATACTGGCA+GGG + tig0026928:42235-42254 Msa1432060:intron 35.0%
ACTGGATTGAGAACATTCAT+CGG - tig0026928:42296-42315 None:intergenic 35.0%
TTATATTTGCAGTGTCTCTG+AGG + tig0026928:42399-42418 Msa1432060:intron 35.0%
GACAATAGGTTTAAGAAACC+AGG + tig0026928:42424-42443 Msa1432060:CDS 35.0%
AGTCGTGTATCATTGTATCT+AGG - tig0026928:42463-42482 None:intergenic 35.0%
! AATCTTAAACCTCGGCTTTT+TGG - tig0026928:42503-42522 None:intergenic 35.0%
TGTTCAGGAAAATCCATCTA+TGG + tig0026928:42649-42668 Msa1432060:intron 35.0%
!! TTACTAGTTTGCTCCATAGA+TGG - tig0026928:42665-42684 None:intergenic 35.0%
!!! TTCCATTTTTTCTACTTCGG+TGG + tig0026928:42697-42716 Msa1432060:CDS 35.0%
AACCACCGAAGTAGAAAAAA+TGG - tig0026928:42702-42721 None:intergenic 35.0%
TTGTGATCAAGCAAACAAGT+AGG - tig0026928:42761-42780 None:intergenic 35.0%
ACAAATGAAAAATGCAGCGA+AGG + tig0026928:42881-42900 Msa1432060:CDS 35.0%
ATCAACAGCTGAAGAAAGAT+CGG - tig0026928:42924-42943 None:intergenic 35.0%
TGGAGCAGTAAATATTGACA+TGG + tig0026928:42952-42971 Msa1432060:CDS 35.0%
!!! TTTTAGGGAAAAGCATTGAG+AGG + tig0026928:43072-43091 Msa1432060:intron 35.0%
GAAGAATTTACTGCAATGGT+TGG - tig0026928:43171-43190 None:intergenic 35.0%
AGAGGAAGAATTTACTGCAA+TGG - tig0026928:43175-43194 None:intergenic 35.0%
TAATATATTGGCATCAAGCC+CGG + tig0026928:43300-43319 Msa1432060:intron 35.0%
AGCTCGCAAAAAATTTATGC+AGG + tig0026928:43332-43351 Msa1432060:intron 35.0%
GCTCGCAAAAAATTTATGCA+GGG + tig0026928:43333-43352 Msa1432060:intron 35.0%
CTCGCAAAAAATTTATGCAG+GGG + tig0026928:43334-43353 Msa1432060:intron 35.0%
AACAAGTACAACGTTTGGTA+AGG - tig0026928:44184-44203 None:intergenic 35.0%
TGTGTAACAAGTACAACGTT+TGG - tig0026928:44189-44208 None:intergenic 35.0%
GATAATACAAACAAGGGGAT+GGG - tig0026928:44286-44305 None:intergenic 35.0%
TGATAATACAAACAAGGGGA+TGG - tig0026928:44287-44306 None:intergenic 35.0%
AACACAAAAGCCATTGTGTT+GGG + tig0026928:44327-44346 Msa1432060:intron 35.0%
!! TTTTCAGCATTGAATGAGTG+CGG + tig0026928:44520-44539 Msa1432060:intron 35.0%
! ATATGCATTGACACACAAAC+AGG + tig0026928:44652-44671 Msa1432060:intron 35.0%
TGAAAATATGAGAAGTTCCC+AGG + tig0026928:44900-44919 Msa1432060:intron 35.0%
GAAAATATGAGAAGTTCCCA+GGG + tig0026928:44901-44920 Msa1432060:intron 35.0%
! GCTTCAAAGTTTTGCATTCA+TGG + tig0026928:44923-44942 Msa1432060:CDS 35.0%
AACACTGATATGATAGAAGG+CGG - tig0026928:44970-44989 None:intergenic 35.0%
CTCAACACTGATATGATAGA+AGG - tig0026928:44973-44992 None:intergenic 35.0%
CATGTAATAGAGGTCATGAA+AGG - tig0026928:45158-45177 None:intergenic 35.0%
ATGACCTCTATTACATGCTT+CGG + tig0026928:45161-45180 Msa1432060:CDS 35.0%
! AACATATGTGGCCTCTTTTA+TGG + tig0026928:45187-45206 Msa1432060:CDS 35.0%
!!! TCCGTTACTTTTTTGTCAGA+TGG + tig0026928:45222-45241 Msa1432060:intron 35.0%
GTTTGACTAATAAATTGGGG+TGG - tig0026928:45386-45405 None:intergenic 35.0%
! CTTTTCCTGACATCTTTTAG+TGG - tig0026928:45459-45478 None:intergenic 35.0%
CTCCCATCTTTCATTAATGA+AGG - tig0026928:45590-45609 None:intergenic 35.0%
GCAACTCTATAACTAGTCAT+TGG - tig0026928:45654-45673 None:intergenic 35.0%
TTACTGTACTTCGATTGTCA+CGG - tig0026928:45703-45722 None:intergenic 35.0%
AGTAACCAAGCATATGAAAC+TGG + tig0026928:45718-45737 Msa1432060:intron 35.0%
TATGTCCAGTTTCATATGCT+TGG - tig0026928:45726-45745 None:intergenic 35.0%
TTACAAGTGCACAAATACAC+AGG - tig0026928:45980-45999 None:intergenic 35.0%
GCCTTATCTGTATATAGGAT+TGG + tig0026928:46008-46027 Msa1432060:intron 35.0%
CTCCCTGTTTGATATTCTTT+AGG - tig0026928:46193-46212 None:intergenic 35.0%
AATTATTAACACAAGGCAGG+GGG - tig0026928:46235-46254 None:intergenic 35.0%
ACTAAACTTATAAATCGGGG+AGG + tig0026928:46483-46502 Msa1432060:intron 35.0%
GAAATGCACAAAGAAATTGG+TGG - tig0026928:46624-46643 None:intergenic 35.0%
CAGTGAACATCACAATAAAC+TGG - tig0026928:46734-46753 None:intergenic 35.0%
CAGTTTATTGTGATGTTCAC+TGG + tig0026928:46732-46751 Msa1432060:CDS 35.0%
TTTATTGTGATGTTCACTGG+TGG + tig0026928:46735-46754 Msa1432060:CDS 35.0%
TATATTTCTCAGTCAACCAG+AGG + tig0026928:46795-46814 Msa1432060:CDS 35.0%
TTCTATGAAAATACTCCCTC+TGG + tig0026928:47010-47029 Msa1432060:intron 35.0%
AAATTGATGAGCATGCATCT+AGG - tig0026928:47133-47152 None:intergenic 35.0%
TAGTGGTTACAGAATCACTT+AGG - tig0026928:47441-47460 None:intergenic 35.0%
! AACGCAGACAAAGATTTTAG+TGG - tig0026928:47458-47477 None:intergenic 35.0%
ACTAAAATCTTTGTCTGCGT+TGG + tig0026928:47457-47476 Msa1432060:intron 35.0%
CTAAAATCTTTGTCTGCGTT+GGG + tig0026928:47458-47477 Msa1432060:intron 35.0%
TAAAATCTTTGTCTGCGTTG+GGG + tig0026928:47459-47478 Msa1432060:intron 35.0%
ATTTCCACAATTAGAGTCGT+TGG + tig0026928:47517-47536 Msa1432060:intron 35.0%
GATACTATAGTGATGAGATC+CGG + tig0026928:47542-47561 Msa1432060:intron 35.0%
ATACTATAGTGATGAGATCC+GGG + tig0026928:47543-47562 Msa1432060:intron 35.0%
! GCAATGTTTGGAATTTGAAG+AGG + tig0026928:47581-47600 Msa1432060:intron 35.0%
CCATATCTCTTTCTCTTCAA+TGG - tig0026928:47612-47631 None:intergenic 35.0%
CCATTGAAGAGAAAGAGATA+TGG + tig0026928:47609-47628 Msa1432060:intron 35.0%
!! CACAAAAAACTGGTCTTCTT+TGG - tig0026928:47675-47694 None:intergenic 35.0%
!!! CAAAGAAGACCAGTTTTTTG+TGG + tig0026928:47673-47692 Msa1432060:intron 35.0%
CAAATTTGAGTACCTTCATG+TGG + tig0026928:47894-47913 Msa1432060:intron 35.0%
ATTGATGCATACTTTGGTGA+GGG + tig0026928:47940-47959 Msa1432060:intron 35.0%
AACAAAGATCCTAGACAAGA+GGG - tig0026928:47991-48010 None:intergenic 35.0%
AAACAAAGATCCTAGACAAG+AGG - tig0026928:47992-48011 None:intergenic 35.0%
!!! TAACTTGCTCCTCTTTTGAA+CGG - tig0026928:48030-48049 None:intergenic 35.0%
AGAGATAGAGAAGCAAAACT+TGG + tig0026928:48075-48094 Msa1432060:intron 35.0%
GAGATAGAGAAGCAAAACTT+GGG + tig0026928:48076-48095 Msa1432060:intron 35.0%
AGATAGAGAAGCAAAACTTG+GGG + tig0026928:48077-48096 Msa1432060:intron 35.0%
TTAATCCCTGTCAATGATCA+TGG + tig0026928:48224-48243 Msa1432060:intron 35.0%
AGAGGTAAGCACAAAAAGTT+GGG - tig0026928:48259-48278 None:intergenic 35.0%
AAGAGGTAAGCACAAAAAGT+TGG - tig0026928:48260-48279 None:intergenic 35.0%
! ATGGTGTAAGCACATTTTAC+AGG - tig0026928:48386-48405 None:intergenic 35.0%
TGAAAACCAGCAATGATTCT+GGG - tig0026928:48788-48807 None:intergenic 35.0%
ATGAAGTACGAAAACTGGAT+AGG - tig0026928:48873-48892 None:intergenic 35.0%
AGTCAATGAAGTACGAAAAC+TGG - tig0026928:48878-48897 None:intergenic 35.0%
CAAATTGCGGAAAAACAACA+TGG - tig0026928:49114-49133 None:intergenic 35.0%
! TAATCCTTTTATCCACTGCT+TGG + tig0026928:49144-49163 Msa1432060:intron 35.0%
! AATCCTTTTATCCACTGCTT+GGG + tig0026928:49145-49164 Msa1432060:intron 35.0%
TAATTCTAATTCCCAAGCAG+TGG - tig0026928:49159-49178 None:intergenic 35.0%
GCTTTACAGTTTACACAAAC+AGG - tig0026928:49188-49207 None:intergenic 35.0%
ATTTAATCTAGGAAAGAGGG+GGG - tig0026928:49292-49311 None:intergenic 35.0%
CATTTAATCTAGGAAAGAGG+GGG - tig0026928:49293-49312 None:intergenic 35.0%
GCATTTAATCTAGGAAAGAG+GGG - tig0026928:49294-49313 None:intergenic 35.0%
CATCTCCATGCATTTAATCT+AGG - tig0026928:49303-49322 None:intergenic 35.0%
GAAGATATTGCGGCTAATAA+TGG + tig0026928:49332-49351 Msa1432060:CDS 35.0%
AAAGATAACGAGTTTGCACA+AGG + tig0026928:49365-49384 Msa1432060:CDS 35.0%
TTTGCACAAGGATCATTAGA+TGG + tig0026928:49377-49396 Msa1432060:CDS 35.0%
AGGATACATTTATTCCACCT+TGG + tig0026928:49423-49442 Msa1432060:CDS 35.0%
ATGTAAATCAGAATGGATCC+CGG - tig0026928:49790-49809 None:intergenic 35.0%
GATCCATTCTGATTTACATG+AGG + tig0026928:49791-49810 Msa1432060:intron 35.0%
TAGACTACCAAAAGAGAGTT+AGG + tig0026928:49831-49850 Msa1432060:intron 35.0%
! ACTTACACCTAACTCTCTTT+TGG - tig0026928:49841-49860 None:intergenic 35.0%
CCCGTACTACTAAATTTATG+AGG - tig0026928:49904-49923 None:intergenic 35.0%
AGTAGAATTTCATGAGCTTC+TGG + tig0026928:50158-50177 Msa1432060:intron 35.0%
AGGTTTCAAATAACCAGGTA+AGG - tig0026928:50226-50245 None:intergenic 35.0%
AACTCAGGTTTCAAATAACC+AGG - tig0026928:50231-50250 None:intergenic 35.0%
AAATAAACCAAGCACAACTC+AGG - tig0026928:50246-50265 None:intergenic 35.0%
!! TTACAGTTTTGTGACTGAAC+CGG + tig0026928:50273-50292 Msa1432060:intron 35.0%
AAATCTGAATCAAAAGCTGC+TGG + tig0026928:50337-50356 Msa1432060:CDS 35.0%
! AATTTTCGAAGGAGACCAAT+CGG - tig0026928:50564-50583 None:intergenic 35.0%
ATGGGAAGAACCGAGAAAAT+CGG - tig0026928:41786-41805 None:intergenic 40.0%
! TTTCGAATTCGGTGAGAACT+GGG - tig0026928:42070-42089 None:intergenic 40.0%
AGTTCTCACCGAATTCGAAA+CGG + tig0026928:42070-42089 Msa1432060:CDS 40.0%
! AAACGTACCCTAAGTTCTGA+AGG - tig0026928:42121-42140 None:intergenic 40.0%
! CTTCGATGTTTTATACTGGC+AGG + tig0026928:42234-42253 Msa1432060:intron 40.0%
ATTGAGAACATTCATCGGTG+AGG - tig0026928:42291-42310 None:intergenic 40.0%
GATGAATGTTCTCAATCCAG+TGG + tig0026928:42295-42314 Msa1432060:CDS 40.0%
AACTAACTTTGCTGAACCAC+TGG - tig0026928:42314-42333 None:intergenic 40.0%
!! TGATGCTTTTGTTTGCAGCT+TGG + tig0026928:42802-42821 Msa1432060:intron 40.0%
! TCAGCTGTTGATAGATCTTC+TGG + tig0026928:42932-42951 Msa1432060:CDS 40.0%
TCCTCTGAATGTCATATACC+TGG + tig0026928:43189-43208 Msa1432060:CDS 40.0%
ATGTCATATACCTGGCAAGA+AGG + tig0026928:43197-43216 Msa1432060:CDS 40.0%
TAGGTGTATCTTATTCCTGC+CGG - tig0026928:44019-44038 None:intergenic 40.0%
GAACACAAAAGCCATTGTGT+TGG + tig0026928:44326-44345 Msa1432060:intron 40.0%
TGACACACAAACAGGAAACT+AGG + tig0026928:44660-44679 Msa1432060:intron 40.0%
!! ATGCAAAACTTTGAAGCCCT+GGG - tig0026928:44920-44939 None:intergenic 40.0%
!! AATGCAAAACTTTGAAGCCC+TGG - tig0026928:44921-44940 None:intergenic 40.0%
TCTTCCGAAGCATGTAATAG+AGG - tig0026928:45168-45187 None:intergenic 40.0%
ATGCTTCGGAAGAACATATG+TGG + tig0026928:45175-45194 Msa1432060:CDS 40.0%
TCATTGGATACAAGGGTGAA+GGG - tig0026928:45638-45657 None:intergenic 40.0%
CGGGAATGAAGAATTCTGAA+GGG - tig0026928:45683-45702 None:intergenic 40.0%
ACGGGAATGAAGAATTCTGA+AGG - tig0026928:45684-45703 None:intergenic 40.0%
TACTGTACTTCGATTGTCAC+GGG - tig0026928:45702-45721 None:intergenic 40.0%
AATGTCAGCACATTGATCAG+TGG - tig0026928:45809-45828 None:intergenic 40.0%
CTTTGAGCTGCATATCACAA+GGG - tig0026928:45861-45880 None:intergenic 40.0%
TCTAGCAATTTCAGCCACAA+AGG - tig0026928:45939-45958 None:intergenic 40.0%
! GTGCAGCCTTATCTGTATAT+AGG + tig0026928:46003-46022 Msa1432060:intron 40.0%
! GCTATCAACGTTTTACAGAC+AGG - tig0026928:46104-46123 None:intergenic 40.0%
! AGAAGTGTAGAGAGAGAGTT+TGG - tig0026928:46159-46178 None:intergenic 40.0%
GCTAAATCTTCATGTGCCTT+TGG + tig0026928:46561-46580 Msa1432060:intron 40.0%
GATGCTGCTCATTGGAAAAA+AGG - tig0026928:47108-47127 None:intergenic 40.0%
! CAACAAGGGATGTACTTTTC+TGG + tig0026928:47180-47199 Msa1432060:intron 40.0%
!!! ATCACAGTTTTGACTCTCGT+TGG - tig0026928:47380-47399 None:intergenic 40.0%
AAAATCTTTGTCTGCGTTGG+GGG + tig0026928:47460-47479 Msa1432060:intron 40.0%
TCAACCAACGACTCTAATTG+TGG - tig0026928:47524-47543 None:intergenic 40.0%
CATTGATGCATACTTTGGTG+AGG + tig0026928:47939-47958 Msa1432060:intron 40.0%
! GAGGGTCTCTGAACTTATTT+TGG + tig0026928:47958-47977 Msa1432060:intron 40.0%
GCAAGTTACAACTGAGGATT+TGG + tig0026928:48042-48061 Msa1432060:CDS 40.0%
GTTCTCCATGATCATTGACA+GGG - tig0026928:48232-48251 None:intergenic 40.0%
TGTTCTCCATGATCATTGAC+AGG - tig0026928:48233-48252 None:intergenic 40.0%
CTAATTAGGAGACAACAGAG+AGG - tig0026928:48325-48344 None:intergenic 40.0%
CATTTATTGTGCTGCAGTTG+TGG + tig0026928:48584-48603 Msa1432060:intron 40.0%
TAATAGCCCAGAATCATTGC+TGG + tig0026928:48779-48798 Msa1432060:CDS 40.0%
CTGAAAACCAGCAATGATTC+TGG - tig0026928:48789-48808 None:intergenic 40.0%
!!! GAATCATTGCTGGTTTTCAG+TGG + tig0026928:48789-48808 Msa1432060:CDS 40.0%
GATAAGTCAGAGCAGAACTT+TGG - tig0026928:49034-49053 None:intergenic 40.0%
ATTCCCAAGCAGTGGATAAA+AGG - tig0026928:49151-49170 None:intergenic 40.0%
GAGAAGAGCTGAAGATATTG+CGG + tig0026928:49322-49341 Msa1432060:CDS 40.0%
!! CGGCTAATAATGGGTCTATT+TGG + tig0026928:49342-49361 Msa1432060:CDS 40.0%
CATATACGGCTGATAATCCA+AGG - tig0026928:49443-49462 None:intergenic 40.0%
! AGCCGTATATGTGCATTGAT+GGG + tig0026928:49452-49471 Msa1432060:CDS 40.0%
AGCCCATCAATGCACATATA+CGG - tig0026928:49457-49476 None:intergenic 40.0%
GCTGGAATCCATTTAATAGC+CGG + tig0026928:49768-49787 Msa1432060:intron 40.0%
CTGGAATCCATTTAATAGCC+GGG + tig0026928:49769-49788 Msa1432060:intron 40.0%
AATGGATCCCGGCTATTAAA+TGG - tig0026928:49779-49798 None:intergenic 40.0%
CTGCCTCATGTAAATCAGAA+TGG - tig0026928:49797-49816 None:intergenic 40.0%
GAAACACAAGCACAGACAAT+GGG - tig0026928:50044-50063 None:intergenic 40.0%
AGAAACACAAGCACAGACAA+TGG - tig0026928:50045-50064 None:intergenic 40.0%
GCACGCCATTGAATTAAAAC+TGG + tig0026928:50195-50214 Msa1432060:intron 40.0%
! TTTGAAACCTGAGTTGTGCT+TGG + tig0026928:50236-50255 Msa1432060:intron 40.0%
TAAATGCTTACCCTTCCGAT+TGG + tig0026928:50546-50565 Msa1432060:three_prime_UTR 40.0%
! GCAACACGCTCTTACAATTT+TGG - tig0026928:50610-50629 None:intergenic 40.0%
TGGGAAGAACCGAGAAAATC+GGG - tig0026928:41785-41804 None:intergenic 45.0%
ATTCAATCTCCCGCTACGTT+AGG + tig0026928:41834-41853 Msa1432060:five_prime_UTR 45.0%
TTCAATCTCCCGCTACGTTA+GGG + tig0026928:41835-41854 Msa1432060:five_prime_UTR 45.0%
TTGAGTGTACCCTAACGTAG+CGG - tig0026928:41847-41866 None:intergenic 45.0%
! AGTAGCTACTTTCGCCATTC+AGG - tig0026928:42032-42051 None:intergenic 45.0%
! GTTTCGAATTCGGTGAGAAC+TGG - tig0026928:42071-42090 None:intergenic 45.0%
!! ATTGAAGCGAGAAAGTGTCG+TGG + tig0026928:42264-42283 Msa1432060:CDS 45.0%
! TATTTGCAGTGTCTCTGAGG+TGG + tig0026928:42402-42421 Msa1432060:intron 45.0%
TATTTGCCACCAAAAAGCCG+AGG + tig0026928:42491-42510 Msa1432060:CDS 45.0%
! CTTAAACCTCGGCTTTTTGG+TGG - tig0026928:42500-42519 None:intergenic 45.0%
! GCCGAGGTTTAAGATTCCAT+CGG + tig0026928:42507-42526 Msa1432060:CDS 45.0%
CCCGATGGAATCTTAAACCT+CGG - tig0026928:42511-42530 None:intergenic 45.0%
! CCGAGGTTTAAGATTCCATC+GGG + tig0026928:42508-42527 Msa1432060:CDS 45.0%
! CGAGGTTTAAGATTCCATCG+GGG + tig0026928:42509-42528 Msa1432060:CDS 45.0%
! GTTTAAGATTCCATCGGGGA+AGG + tig0026928:42513-42532 Msa1432060:CDS 45.0%
! TTCACATTTTCCTTCCCCGA+TGG - tig0026928:42526-42545 None:intergenic 45.0%
ATCGGGGAAGGAAAATGTGA+AGG + tig0026928:42525-42544 Msa1432060:CDS 45.0%
TTGGAGAAATCTGCTACCTC+AGG + tig0026928:42821-42840 Msa1432060:CDS 45.0%
GCTAATCCATTATCACCACG+CGG - tig0026928:43114-43133 None:intergenic 45.0%
!! TTAGCTACCGATTCATCCGA+TGG + tig0026928:43129-43148 Msa1432060:CDS 45.0%
GCCAGGTATATGACATTCAG+AGG - tig0026928:43193-43212 None:intergenic 45.0%
AGGGGATACTATTCGCATAC+TGG - tig0026928:43247-43266 None:intergenic 45.0%
TTACCAATTCGCAGAAGCAG+GGG - tig0026928:43265-43284 None:intergenic 45.0%
CTTACCAATTCGCAGAAGCA+GGG - tig0026928:43266-43285 None:intergenic 45.0%
ACTTACCAATTCGCAGAAGC+AGG - tig0026928:43267-43286 None:intergenic 45.0%
AGGTGTATCTTATTCCTGCC+GGG - tig0026928:44018-44037 None:intergenic 45.0%
ACGTTTGGTAAGGTCTTCGT+GGG - tig0026928:44174-44193 None:intergenic 45.0%
AACGTTTGGTAAGGTCTTCG+TGG - tig0026928:44175-44194 None:intergenic 45.0%
CATCTTACAGCCCAACACAA+TGG - tig0026928:44340-44359 None:intergenic 45.0%
AGAAGGCGGAAGAACAGATT+GGG - tig0026928:44956-44975 None:intergenic 45.0%
TAGAAGGCGGAAGAACAGAT+TGG - tig0026928:44957-44976 None:intergenic 45.0%
TTGAGCTCATCAACTGCAGA+AGG + tig0026928:44988-45007 Msa1432060:CDS 45.0%
GTTCTTAAGGAAACGGCAAG+TGG + tig0026928:45120-45139 Msa1432060:CDS 45.0%
AGGGAGTTCAGCTGTTATAC+TGG - tig0026928:45619-45638 None:intergenic 45.0%
GTCATTGGATACAAGGGTGA+AGG - tig0026928:45639-45658 None:intergenic 45.0%
CCTTTGAGCTGCATATCACA+AGG - tig0026928:45862-45881 None:intergenic 45.0%
CCTTGTGATATGCAGCTCAA+AGG + tig0026928:45859-45878 Msa1432060:intron 45.0%
CATACAAGTACAGAGCGAGT+AGG + tig0026928:46911-46930 Msa1432060:intron 45.0%
! TTTCTGGTAATGCTTGCCTC+AGG + tig0026928:46957-46976 Msa1432060:intron 45.0%
! TCTAGGATGATGCTGCTCAT+TGG - tig0026928:47116-47135 None:intergenic 45.0%
ATAGATCCGGCTGTTCAACA+AGG + tig0026928:47165-47184 Msa1432060:intron 45.0%
TAGATCCGGCTGTTCAACAA+GGG + tig0026928:47166-47185 Msa1432060:intron 45.0%
TACATCCCTTGTTGAACAGC+CGG - tig0026928:47174-47193 None:intergenic 45.0%
!!! GGGATGTACTTTTCTGGAGT+TGG + tig0026928:47186-47205 Msa1432060:intron 45.0%
TCTTTAGTGTTGCGCCTGTT+GGG + tig0026928:47278-47297 Msa1432060:intron 45.0%
CTAGCTGTTATTGACCCAAC+AGG - tig0026928:47295-47314 None:intergenic 45.0%
TTGACTCTCGTTGGCAGAAA+GGG - tig0026928:47371-47390 None:intergenic 45.0%
TTTGACTCTCGTTGGCAGAA+AGG - tig0026928:47372-47391 None:intergenic 45.0%
! TCCTCTTTTGAACGGCAAAG+AGG - tig0026928:48022-48041 None:intergenic 45.0%
AGAGGAGCAAGTTACAACTG+AGG + tig0026928:48036-48055 Msa1432060:CDS 45.0%
ATTAGCTGACGCCACTTAGT+GGG + tig0026928:48149-48168 Msa1432060:intron 45.0%
! CATTTGGAACAATGCAGACC+CGG + tig0026928:48730-48749 Msa1432060:intron 45.0%
! GTCAGAGCAGAACTTTGGAA+CGG - tig0026928:49029-49048 None:intergenic 45.0%
TGTCAGCTGTCACATACATC+AGG - tig0026928:49056-49075 None:intergenic 45.0%
ATACGGCTGATAATCCAAGG+TGG - tig0026928:49440-49459 None:intergenic 45.0%
CAGCCGTATATGTGCATTGA+TGG + tig0026928:49451-49470 Msa1432060:CDS 45.0%
CGTTATCAGAGCTCAACACA+TGG - tig0026928:49574-49593 None:intergenic 45.0%
! TGTGTTGAGCTCTGATAACG+AGG + tig0026928:49574-49593 Msa1432060:intron 45.0%
! ACAAGCACAGACAATGGGTT+GGG - tig0026928:50039-50058 None:intergenic 45.0%
! CAATGAAGTGTCACTGCGAA+AGG - tig0026928:50099-50118 None:intergenic 45.0%
GCAACTCAAGACTAATCAGC+AGG - tig0026928:50128-50147 None:intergenic 45.0%
AAAACTGGAATCGCCTTACC+TGG + tig0026928:50210-50229 Msa1432060:intron 45.0%
CAAAGCAACATTCAGTCCAC+TGG - tig0026928:50302-50321 None:intergenic 45.0%
!!! TAATTTAAAATGAAAATAAT+TGG - tig0026928:41691-41710 None:intergenic 5.0%
!!! TTTTTATTTTATTTGTTTTT+TGG + tig0026928:41719-41738 Msa1432060:five_prime_UTR 5.0%
!! AAAAAAACATATTAAATTTA+AGG + tig0026928:43385-43404 Msa1432060:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTC+TGG + tig0026928:46941-46960 Msa1432060:intron 5.0%
!! GCGGTGTCGTATCAGTGAAT+GGG - tig0026928:41804-41823 None:intergenic 50.0%
!! AGCGGTGTCGTATCAGTGAA+TGG - tig0026928:41805-41824 None:intergenic 50.0%
TGAGTGTACCCTAACGTAGC+GGG - tig0026928:41846-41865 None:intergenic 50.0%
!! GTGTCTCTGAGGTGGACAAT+AGG + tig0026928:42410-42429 Msa1432060:intron 50.0%
CTAGGCGCCCTAAATAATCC+TGG - tig0026928:42445-42464 None:intergenic 50.0%
TCGGTGGTTAAGAGACAGCA+AGG + tig0026928:42713-42732 Msa1432060:CDS 50.0%
CGGTGGTTAAGAGACAGCAA+GGG + tig0026928:42714-42733 Msa1432060:CDS 50.0%
GGTGGTTAAGAGACAGCAAG+GGG + tig0026928:42715-42734 Msa1432060:CDS 50.0%
AGAGACAGCAAGGGGTTTCA+CGG + tig0026928:42723-42742 Msa1432060:CDS 50.0%
GAAATCTGCTACCTCAGGAG+AGG + tig0026928:42826-42845 Msa1432060:CDS 50.0%
TACCTCAGGAGAGGTTACCA+AGG + tig0026928:42835-42854 Msa1432060:CDS 50.0%
! ATCCTTGGTAACCTCTCCTG+AGG - tig0026928:42840-42859 None:intergenic 50.0%
TCAGGAGAGGTTACCAAGGA+TGG + tig0026928:42839-42858 Msa1432060:CDS 50.0%
TACCAAGGATGGTGTGTTGC+AGG + tig0026928:42850-42869 Msa1432060:CDS 50.0%
TCCACGTCCATCGGATGAAT+CGG - tig0026928:43139-43158 None:intergenic 50.0%
TGCTGAATCTCCACGTCCAT+CGG - tig0026928:43148-43167 None:intergenic 50.0%
TATCCCCTGCTTCTGCGAAT+TGG + tig0026928:43259-43278 Msa1432060:intron 50.0%
CAGTGCAGGTAGGTTAACTG+AGG - tig0026928:44868-44887 None:intergenic 50.0%
CATTCCTGTAAGGACAGTGC+AGG - tig0026928:44882-44901 None:intergenic 50.0%
GAAGGCGGAAGAACAGATTG+GGG - tig0026928:44955-44974 None:intergenic 50.0%
AGCTCATCAACTGCAGAAGG+AGG + tig0026928:44991-45010 Msa1432060:CDS 50.0%
TAAGGAAACGGCAAGTGGCT+TGG + tig0026928:45125-45144 Msa1432060:CDS 50.0%
AAGGAAACGGCAAGTGGCTT+GGG + tig0026928:45126-45145 Msa1432060:CDS 50.0%
! GCAGCTCAAAGGTACAACTC+AGG + tig0026928:45870-45889 Msa1432060:intron 50.0%
AGGGGGAGCTCTACTTCAAT+CGG - tig0026928:46218-46237 None:intergenic 50.0%
CCAGTGCAAGCACAACTCAA+GGG - tig0026928:46266-46285 None:intergenic 50.0%
ACCAGTGCAAGCACAACTCA+AGG - tig0026928:46267-46286 None:intergenic 50.0%
GTCTTTAGTGTTGCGCCTGT+TGG + tig0026928:47277-47296 Msa1432060:intron 50.0%
AGCAACAGCCGTGCAATGTT+TGG + tig0026928:47569-47588 Msa1432060:intron 50.0%
ATCTCTCTGCAGAACAGTGC+TGG + tig0026928:47643-47662 Msa1432060:intron 50.0%
TCTCTCTGCAGAACAGTGCT+GGG + tig0026928:47644-47663 Msa1432060:intron 50.0%
GGCTGTATACCCTCTTGTCT+AGG + tig0026928:47979-47998 Msa1432060:intron 50.0%
GCCTCTTTGCCGTTCAAAAG+AGG + tig0026928:48018-48037 Msa1432060:CDS 50.0%
AGAGAAGCAAAACTTGGGGC+AGG + tig0026928:48081-48100 Msa1432060:intron 50.0%
CATTAGCTGACGCCACTTAG+TGG + tig0026928:48148-48167 Msa1432060:intron 50.0%
TGACGCCACTTAGTGGGATA+AGG + tig0026928:48155-48174 Msa1432060:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - tig0026928:48163-48182 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + tig0026928:48160-48179 Msa1432060:intron 50.0%
CTTAGTGGGATAAGGCTTGG+TGG + tig0026928:48163-48182 Msa1432060:intron 50.0%
AGTGGCAGCAACAATGTGCA+TGG + tig0026928:48807-48826 Msa1432060:CDS 50.0%
AACGTCCACACTAGACAGTG+AGG - tig0026928:48985-49004 None:intergenic 50.0%
GGAACAGGAGAACACAAGAC+AGG - tig0026928:49008-49027 None:intergenic 50.0%
!! GCAGAACTTTGGAACGGAAC+AGG - tig0026928:49023-49042 None:intergenic 50.0%
!! TGTGCATTGATGGGCTCTGA+AGG + tig0026928:49461-49480 Msa1432060:CDS 50.0%
!! GTGCATTGATGGGCTCTGAA+GGG + tig0026928:49462-49481 Msa1432060:CDS 50.0%
! AGGTACGTGGAGCTTTTGCT+TGG + tig0026928:49500-49519 Msa1432060:intron 50.0%
AATGGGGAGGATCCATTTCC+AGG - tig0026928:49701-49720 None:intergenic 50.0%
CACAAGCACAGACAATGGGT+TGG - tig0026928:50040-50059 None:intergenic 50.0%
ACATTCAGTCCACTGGAGAC+CGG - tig0026928:50295-50314 None:intergenic 50.0%
CGAGGCTGCAGTAATTCCTT+TGG + tig0026928:50373-50392 Msa1432060:CDS 50.0%
!! TGCAGCTTCTGGAATGCCAA+AGG - tig0026928:50392-50411 None:intergenic 50.0%
GAAGACGTAACTGCAGCTTC+TGG - tig0026928:50403-50422 None:intergenic 50.0%
TCGAAGGAGACCAATCGGAA+GGG - tig0026928:50559-50578 None:intergenic 50.0%
TTCGAAGGAGACCAATCGGA+AGG - tig0026928:50560-50579 None:intergenic 50.0%
! GAACTGGGAGGCATAGCACT+TGG - tig0026928:42055-42074 None:intergenic 55.0%
! CGAATTCGGTGAGAACTGGG+AGG - tig0026928:42067-42086 None:intergenic 55.0%
CAAGGATGGTGTGTTGCAGG+CGG + tig0026928:42853-42872 Msa1432060:CDS 55.0%
AAGGATGGTGTGTTGCAGGC+GGG + tig0026928:42854-42873 Msa1432060:CDS 55.0%
!! TTGAGAGGACTAGCCTCGCT+TGG + tig0026928:43087-43106 Msa1432060:CDS 55.0%
CTTGGACCGCGTGGTGATAA+TGG + tig0026928:43105-43124 Msa1432060:CDS 55.0%
! ACCGATTCATCCGATGGACG+TGG + tig0026928:43135-43154 Msa1432060:CDS 55.0%
ACCTGGCAAGAAGGCTCCTT+TGG + tig0026928:43206-43225 Msa1432060:CDS 55.0%
TCCAAAGGAGCCTTCTTGCC+AGG - tig0026928:43210-43229 None:intergenic 55.0%
TCATATGGGAGGGGTAGCCT+TGG - tig0026928:43977-43996 None:intergenic 55.0%
AGGCTACCCCTCCCATATGA+AGG + tig0026928:43977-43996 Msa1432060:intron 55.0%
GGCTACCCCTCCCATATGAA+GGG + tig0026928:43978-43997 Msa1432060:intron 55.0%
CGTAGCCCTTCATATGGGAG+GGG - tig0026928:43986-44005 None:intergenic 55.0%
GCGTAGCCCTTCATATGGGA+GGG - tig0026928:43987-44006 None:intergenic 55.0%
! AGGGGCGTAGCCCTTCATAT+GGG - tig0026928:43991-44010 None:intergenic 55.0%
TTATTCCTGCCGGGCTTCAG+GGG - tig0026928:44009-44028 None:intergenic 55.0%
CTTATTCCTGCCGGGCTTCA+GGG - tig0026928:44010-44029 None:intergenic 55.0%
TCTTATTCCTGCCGGGCTTC+AGG - tig0026928:44011-44030 None:intergenic 55.0%
CCTGTAAGGACAGTGCAGGT+AGG - tig0026928:44878-44897 None:intergenic 55.0%
CCTACCTGCACTGTCCTTAC+AGG + tig0026928:44875-44894 Msa1432060:intron 55.0%
! ACAAAGGCGCAAACTCAGGG+TGG - tig0026928:45923-45942 None:intergenic 55.0%
ACCCTGAGTTTGCGCCTTTG+TGG + tig0026928:45922-45941 Msa1432060:intron 55.0%
! GCCACAAAGGCGCAAACTCA+GGG - tig0026928:45926-45945 None:intergenic 55.0%
! AGCCACAAAGGCGCAAACTC+AGG - tig0026928:45927-45946 None:intergenic 55.0%
! CCCTTGAGTTGTGCTTGCAC+TGG + tig0026928:46263-46282 Msa1432060:intron 55.0%
! GTGATGTTCACTGGTGGCGA+TGG + tig0026928:46741-46760 Msa1432060:CDS 55.0%
ACTCTCGTTGGCAGAAAGGG+AGG - tig0026928:47368-47387 None:intergenic 55.0%
AGAGAATGACCTTGAGCGCC+GGG - tig0026928:48751-48770 None:intergenic 55.0%
CAGAGAATGACCTTGAGCGC+CGG - tig0026928:48752-48771 None:intergenic 55.0%
CGTGACCTCACTGTCTAGTG+TGG + tig0026928:48977-48996 Msa1432060:CDS 55.0%
!! CATTGATGGGCTCTGAAGGG+AGG + tig0026928:49465-49484 Msa1432060:CDS 55.0%
! CTCTGAAGGGAGGAGCTTTG+AGG + tig0026928:49475-49494 Msa1432060:CDS 55.0%
!! AAGGGAGGAGCTTTGAGGCA+AGG + tig0026928:49480-49499 Msa1432060:CDS 55.0%
!! GAGCTTTGAGGCAAGGTACG+TGG + tig0026928:49487-49506 Msa1432060:intron 55.0%
CGCCTGCAACACACCATCCT+TGG - tig0026928:42855-42874 None:intergenic 60.0%
ATTGGCATCAAGCCCGGCAG+CGG + tig0026928:43306-43325 Msa1432060:intron 60.0%
GGCGTAGCCCTTCATATGGG+AGG - tig0026928:43988-44007 None:intergenic 60.0%
! CAGGGGCGTAGCCCTTCATA+TGG - tig0026928:43992-44011 None:intergenic 60.0%
! TTCACTGGTGGCGATGGCTC+TGG + tig0026928:46747-46766 Msa1432060:CDS 60.0%
! TGCACGGCTGTTGCTTCACC+CGG - tig0026928:47564-47583 None:intergenic 60.0%
GTGACTGAACCGGTCTCCAG+TGG + tig0026928:50283-50302 Msa1432060:CDS 60.0%
GCTGGCAGTGAAAGCTTGCG+AGG + tig0026928:50355-50374 Msa1432060:CDS 60.0%
ATCACCACGCGGTCCAAGCG+AGG - tig0026928:43103-43122 None:intergenic 65.0%
TTTGCGAGCTTCGCCGCTGC+CGG - tig0026928:43322-43341 None:intergenic 65.0%
CAATGCAGACCCGGCGCTCA+AGG + tig0026928:48739-48758 Msa1432060:intron 65.0%
CTAGCCTCGCTTGGACCGCG+TGG + tig0026928:43096-43115 Msa1432060:CDS 70.0%
TTGCGAGCTTCGCCGCTGCC+GGG - tig0026928:43321-43340 None:intergenic 70.0%
AGGGCTACGCCCCTGAAGCC+CGG + tig0026928:43997-44016 Msa1432060:intron 70.0%
CTACGCCCCTGAAGCCCGGC+AGG + tig0026928:44001-44020 Msa1432060:intron 75.0%
Chromosome Type Strat End Strand Name
tig0026928 gene 41681 50734 41681 ID=Msa1432060;Name=Msa1432060
tig0026928 mRNA 41681 50734 41681 ID=Msa1432060-mRNA-1;Parent=Msa1432060;Name=Msa1432060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=228|0.85|0.8|1|0.78|0.66|15|239|570
tig0026928 exon 41681 41856 41681 ID=Msa1432060-mRNA-1:exon:7834;Parent=Msa1432060-mRNA-1
tig0026928 exon 41982 42132 41982 ID=Msa1432060-mRNA-1:exon:7835;Parent=Msa1432060-mRNA-1
tig0026928 exon 42256 42326 42256 ID=Msa1432060-mRNA-1:exon:7836;Parent=Msa1432060-mRNA-1
tig0026928 exon 42411 42546 42411 ID=Msa1432060-mRNA-1:exon:7837;Parent=Msa1432060-mRNA-1
tig0026928 exon 42656 42744 42656 ID=Msa1432060-mRNA-1:exon:7838;Parent=Msa1432060-mRNA-1
tig0026928 exon 42820 42973 42820 ID=Msa1432060-mRNA-1:exon:7839;Parent=Msa1432060-mRNA-1
tig0026928 exon 43078 43257 43078 ID=Msa1432060-mRNA-1:exon:7840;Parent=Msa1432060-mRNA-1
tig0026928 exon 44922 45012 44922 ID=Msa1432060-mRNA-1:exon:7841;Parent=Msa1432060-mRNA-1
tig0026928 exon 45113 45208 45113 ID=Msa1432060-mRNA-1:exon:7842;Parent=Msa1432060-mRNA-1
tig0026928 exon 46721 46842 46721 ID=Msa1432060-mRNA-1:exon:7843;Parent=Msa1432060-mRNA-1
tig0026928 exon 48001 48063 48001 ID=Msa1432060-mRNA-1:exon:7844;Parent=Msa1432060-mRNA-1
tig0026928 exon 48747 48856 48747 ID=Msa1432060-mRNA-1:exon:7845;Parent=Msa1432060-mRNA-1
tig0026928 exon 48971 49058 48971 ID=Msa1432060-mRNA-1:exon:7846;Parent=Msa1432060-mRNA-1
tig0026928 exon 49305 49501 49305 ID=Msa1432060-mRNA-1:exon:7847;Parent=Msa1432060-mRNA-1
tig0026928 exon 50279 50734 50279 ID=Msa1432060-mRNA-1:exon:7848;Parent=Msa1432060-mRNA-1
tig0026928 five_prime_UTR 41681 41856 41681 ID=Msa1432060-mRNA-1:five_prime_utr;Parent=Msa1432060-mRNA-1
tig0026928 five_prime_UTR 41982 42033 41982 ID=Msa1432060-mRNA-1:five_prime_utr;Parent=Msa1432060-mRNA-1
tig0026928 CDS 42034 42132 42034 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 42256 42326 42256 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 42411 42546 42411 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 42656 42744 42656 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 42820 42973 42820 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 43078 43257 43078 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 44922 45012 44922 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 45113 45208 45113 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 46721 46842 46721 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 48001 48063 48001 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 48747 48856 48747 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 48971 49058 48971 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 49305 49501 49305 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 CDS 50279 50495 50279 ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1
tig0026928 three_prime_UTR 50496 50734 50496 ID=Msa1432060-mRNA-1:three_prime_utr;Parent=Msa1432060-mRNA-1
Gene Sequence

>Msa1432060

ATGGCGAAAGTAGCTACTCCAAGTGCTATGCCTCCCAGTTCTCACCGAATTCGAAACGGTGTTTCTATTGGTAAAAGAAAAACACCTTCAGAACTTAGGGGAGAGCAATTGAAGCGAGAAAGTGTCGTGGACCTCACCGATGAATGTTCTCAATCCAGTGGTTCAGCAAATGTCTCTGAGGTGGACAATAGGTTTAAGAAACCAGGATTATTTAGGGCGCCTAGATACAATGATACACGACTTGATGAAGTATTTGCCACCAAAAAGCCGAGGTTTAAGATTCCATCGGGGAAGGAAAATGTGAAGGAAAATCCATCTATGGAGCAAACTAGTAATCTAAAGAATGCTTCCATTTTTTCTACTTCGGTGGTTAAGAGACAGCAAGGGGTTTCACGCTTGGAGAAATCTGCTACCTCAGGAGAGGTTACCAAGGATGGTGTGTTGCAGGCGGGTGAAACAAATGAAAAATGCAGCGAAGGAAAGTTTCTTAGTGTTGCCGATCTTTCTTCAGCTGTTGATAGATCTTCTGGAGCAGTAAATATTGACATGGGAAAAGCATTGAGAGGACTAGCCTCGCTTGGACCGCGTGGTGATAATGGATTAGCTACCGATTCATCCGATGGACGTGGAGATTCAGCACCAACCATTGCAGTAAATTCTTCCTCTGAATGTCATATACCTGGCAAGAAGGCTCCTTTGGATCTTACTTTAAAAACCAGTATGCGAATAGGCTTCAAAGTTTTGCATTCATGGATGTATCCCCAATCTGTTCTTCCGCCTTCTATCATATCAGTGTTGAGCTCATCAACTGCAGAAGGAGAATTGGAGTTCTTAAGGAAACGGCAAGTGGCTTGGGAAGAATCCTTTCATGACCTCTATTACATGCTTCGGAAGAACATATGTGGCCTCTTTTATGTCTGCACTTCCCAGTTTATTGTGATGTTCACTGGTGGCGATGGCTCTGGTAAATCCAAATGTTCATGCAATGCTTATATTTCTCAGTCAACCAGAGGTTTTAGATCATTGTTAAGAGAGCATGATCTTTGTTTCTCTATGCCTCTTTGCCGTTCAAAAGAGGAGCAAGTTACAACTGAGGATTTGACCCGGCGCTCAAGGTCATTCTCTGACGTTGATAATAGCCCAGAATCATTGCTGGTTTTCAGTGGCAGCAACAATGTGCATGGCTTATTTGACCTATTACTGAATTACAGAACTCTCGTGACCTCACTGTCTAGTGTGGACGTTCCTGTCTTGTGTTCTCCTGTTCCGTTCCAAAGTTCTGCTCTGACTTATCCTGATATTAAATGCATGGAGATGAGAAGAGCTGAAGATATTGCGGCTAATAATGGGTCTATTTGGAAAGATAACGAGTTTGCACAAGGATCATTAGATGGTCTTTTATGTAGCATTGAAATTAAGGATACATTTATTCCACCTTGGATTATCAGCCGTATATGTGCATTGATGGGCTCTGAAGGGAGGAGCTTTGAGGCAAGTTTTGTGACTGAACCGGTCTCCAGTGGACTGAATGTTGCTTTGAAATCAACGTGTGAAAAATCTGAATCAAAAGCTGCTGGCAGTGAAAGCTTGCGAGGCTGCAGTAATTCCTTTGGCATTCCAGAAGCTGCAGTTACGTCTTCCCTATGTTCATGTACACTAAAAAGTGTAAAGTACTGTGATGGTTCTTATATAGCATCTCTATCCCCTGTATAA

Protein sequence

>Msa1432060

MAKVATPSAMPPSSHRIRNGVSIGKRKTPSELRGEQLKRESVVDLTDECSQSSGSANVSEVDNRFKKPGLFRAPRYNDTRLDEVFATKKPRFKIPSGKENVKENPSMEQTSNLKNASIFSTSVVKRQQGVSRLEKSATSGEVTKDGVLQAGETNEKCSEGKFLSVADLSSAVDRSSGAVNIDMGKALRGLASLGPRGDNGLATDSSDGRGDSAPTIAVNSSSECHIPGKKAPLDLTLKTSMRIGFKVLHSWMYPQSVLPPSIISVLSSSTAEGELEFLRKRQVAWEESFHDLYYMLRKNICGLFYVCTSQFIVMFTGGDGSGKSKCSCNAYISQSTRGFRSLLREHDLCFSMPLCRSKEEQVTTEDLTRRSRSFSDVDNSPESLLVFSGSNNVHGLFDLLLNYRTLVTSLSSVDVPVLCSPVPFQSSALTYPDIKCMEMRRAEDIAANNGSIWKDNEFAQGSLDGLLCSIEIKDTFIPPWIISRICALMGSEGRSFEASFVTEPVSSGLNVALKSTCEKSESKAAGSESLRGCSNSFGIPEAAVTSSLCSCTLKSVKYCDGSYIASLSPV*