Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432060 | XP_013450268.1 | 93.489 | 599 | 10 | 2 | 1 | 570 | 1 | 599 | 0.0 | 1125 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432060 | sp|Q9QXP4|DONS_MOUSE | 25.521 | 384 | 211 | 17 | 234 | 566 | 198 | 557 | 7.49e-14 | 77.8 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432060 | A0A072U4M0 | 93.489 | 599 | 10 | 2 | 1 | 570 | 1 | 599 | 0.0 | 1125 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0006840 | Msa1432060 | 0.822368 | 2.459698e-53 | -8.615850e-47 |
Msa0018920 | Msa1432060 | 0.806717 | 7.184504e-50 | -8.615850e-47 |
Msa0027800 | Msa1432060 | 0.823916 | 1.070532e-53 | -8.615850e-47 |
Msa0030070 | Msa1432060 | 0.824688 | 7.049847e-54 | -8.615850e-47 |
Msa0032980 | Msa1432060 | 0.820423 | 6.912885e-53 | -8.615850e-47 |
Msa0040640 | Msa1432060 | 0.800893 | 1.164170e-48 | -8.615850e-47 |
Msa0050530 | Msa1432060 | 0.845836 | 3.168264e-59 | -8.615850e-47 |
Msa0067380 | Msa1432060 | 0.805879 | 1.078466e-49 | -8.615850e-47 |
Msa0080440 | Msa1432060 | 0.804085 | 2.558316e-49 | -8.615850e-47 |
Msa0090440 | Msa1432060 | 0.810886 | 9.220271e-51 | -8.615850e-47 |
Msa0091350 | Msa1432060 | 0.846648 | 1.903769e-59 | -8.615850e-47 |
Msa0094180 | Msa1432060 | 0.842100 | 3.178366e-58 | -8.615850e-47 |
Msa0100600 | Msa1432060 | 0.857493 | 1.572557e-62 | -8.615850e-47 |
Msa0100890 | Msa1432060 | 0.828485 | 8.758480e-55 | -8.615850e-47 |
Msa0106630 | Msa1432060 | 0.814888 | 1.224871e-51 | -8.615850e-47 |
Msa0113410 | Msa1432060 | 0.812572 | 3.963281e-51 | -8.615850e-47 |
Msa1361930 | Msa1432060 | 0.829426 | 5.182903e-55 | -8.615850e-47 |
Msa1381800 | Msa1432060 | 0.836650 | 8.263275e-57 | -8.615850e-47 |
Msa1385570 | Msa1432060 | 0.812236 | 4.691822e-51 | -8.615850e-47 |
Msa1387500 | Msa1432060 | 0.819400 | 1.185047e-52 | -8.615850e-47 |
Msa1390210 | Msa1432060 | 0.829618 | 4.655481e-55 | -8.615850e-47 |
Msa1393560 | Msa1432060 | 0.822252 | 2.616387e-53 | -8.615850e-47 |
Msa1399190 | Msa1432060 | 0.824511 | 7.757653e-54 | -8.615850e-47 |
Msa1400780 | Msa1432060 | 0.818664 | 1.742409e-52 | -8.615850e-47 |
Msa1406720 | Msa1432060 | 0.820785 | 5.707867e-53 | -8.615850e-47 |
Msa1410190 | Msa1432060 | 0.809020 | 2.326054e-50 | -8.615850e-47 |
Msa1419900 | Msa1432060 | 0.819411 | 1.178014e-52 | -8.615850e-47 |
Msa1424370 | Msa1432060 | 0.844670 | 6.546174e-59 | -8.615850e-47 |
Msa1424590 | Msa1432060 | 0.802191 | 6.307975e-49 | -8.615850e-47 |
Msa1426320 | Msa1432060 | 0.815205 | 1.041458e-51 | -8.615850e-47 |
Msa1432060 | Msa1435100 | 0.817392 | 3.377553e-52 | -8.615850e-47 |
Msa1432060 | Msa1439730 | 0.820689 | 6.006114e-53 | -8.615850e-47 |
Msa1432060 | Msa1442260 | 0.820986 | 5.132978e-53 | -8.615850e-47 |
Msa0608350 | Msa1432060 | 0.838425 | 2.898059e-57 | -8.615850e-47 |
Msa0612410 | Msa1432060 | 0.813898 | 2.027142e-51 | -8.615850e-47 |
Msa0615630 | Msa1432060 | 0.804095 | 2.546594e-49 | -8.615850e-47 |
Msa0620500 | Msa1432060 | 0.824931 | 6.175817e-54 | -8.615850e-47 |
Msa0622920 | Msa1432060 | 0.808712 | 2.707108e-50 | -8.615850e-47 |
Msa0625620 | Msa1432060 | 0.807216 | 5.633089e-50 | -8.615850e-47 |
Msa0640800 | Msa1432060 | 0.837589 | 4.755892e-57 | -8.615850e-47 |
Msa0645340 | Msa1432060 | 0.813872 | 2.054328e-51 | -8.615850e-47 |
Msa0647440 | Msa1432060 | 0.833621 | 4.801551e-56 | -8.615850e-47 |
Msa0648760 | Msa1432060 | 0.852527 | 4.355165e-61 | -8.615850e-47 |
Msa0653160 | Msa1432060 | 0.802268 | 6.081733e-49 | -8.615850e-47 |
Msa0654740 | Msa1432060 | 0.821262 | 4.434012e-53 | -8.615850e-47 |
Msa0657210 | Msa1432060 | 0.805905 | 1.065227e-49 | -8.615850e-47 |
Msa0659200 | Msa1432060 | 0.816959 | 4.226209e-52 | -8.615850e-47 |
Msa0663290 | Msa1432060 | 0.822791 | 1.960592e-53 | -8.615850e-47 |
Msa0664070 | Msa1432060 | 0.821563 | 3.778090e-53 | -8.615850e-47 |
Msa0688380 | Msa1432060 | 0.808773 | 2.626870e-50 | -8.615850e-47 |
Msa0688620 | Msa1432060 | 0.835059 | 2.091241e-56 | -8.615850e-47 |
Msa0690320 | Msa1432060 | 0.838360 | 3.011181e-57 | -8.615850e-47 |
Msa0690570 | Msa1432060 | 0.813044 | 3.124227e-51 | -8.615850e-47 |
Msa0690740 | Msa1432060 | 0.810868 | 9.306803e-51 | -8.615850e-47 |
Msa0691270 | Msa1432060 | 0.836829 | 7.437403e-57 | -8.615850e-47 |
Msa0701250 | Msa1432060 | 0.819554 | 1.092579e-52 | -8.615850e-47 |
Msa0705180 | Msa1432060 | 0.815218 | 1.034510e-51 | -8.615850e-47 |
Msa0707260 | Msa1432060 | 0.811993 | 5.301264e-51 | -8.615850e-47 |
Msa0708980 | Msa1432060 | 0.800920 | 1.149131e-48 | -8.615850e-47 |
Msa0717900 | Msa1432060 | 0.829676 | 4.505610e-55 | -8.615850e-47 |
Msa0720280 | Msa1432060 | 0.870737 | 1.164088e-66 | -8.615850e-47 |
Msa0737130 | Msa1432060 | 0.800189 | 1.619543e-48 | -8.615850e-47 |
Msa0749190 | Msa1432060 | 0.833262 | 5.901424e-56 | -8.615850e-47 |
Msa0750520 | Msa1432060 | 0.836051 | 1.173916e-56 | -8.615850e-47 |
Msa0751200 | Msa1432060 | 0.809658 | 1.696886e-50 | -8.615850e-47 |
Msa0751250 | Msa1432060 | 0.820005 | 8.620612e-53 | -8.615850e-47 |
Msa0751720 | Msa1432060 | 0.816301 | 5.935614e-52 | -8.615850e-47 |
Msa0790630 | Msa1432060 | 0.813181 | 2.914500e-51 | -8.615850e-47 |
Msa0803140 | Msa1432060 | 0.869722 | 2.502954e-66 | -8.615850e-47 |
Msa0816080 | Msa1432060 | 0.838810 | 2.305078e-57 | -8.615850e-47 |
Msa0816230 | Msa1432060 | 0.837080 | 6.419823e-57 | -8.615850e-47 |
Msa0831620 | Msa1432060 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
Msa0837680 | Msa1432060 | 0.832251 | 1.051818e-55 | -8.615850e-47 |
Msa0841500 | Msa1432060 | 0.855159 | 7.607655e-62 | -8.615850e-47 |
Msa0125590 | Msa1432060 | 0.850203 | 1.976753e-60 | -8.615850e-47 |
Msa0127340 | Msa1432060 | 0.842138 | 3.104159e-58 | -8.615850e-47 |
Msa0153210 | Msa1432060 | 0.818234 | 2.180430e-52 | -8.615850e-47 |
Msa0158900 | Msa1432060 | 0.847837 | 8.978922e-60 | -8.615850e-47 |
Msa0165830 | Msa1432060 | 0.822236 | 2.638591e-53 | -8.615850e-47 |
Msa0170070 | Msa1432060 | 0.840566 | 8.050044e-58 | -8.615850e-47 |
Msa0184700 | Msa1432060 | 0.810197 | 1.299003e-50 | -8.615850e-47 |
Msa0204970 | Msa1432060 | 0.841135 | 5.709029e-58 | -8.615850e-47 |
Msa0225800 | Msa1432060 | 0.851573 | 8.125113e-61 | -8.615850e-47 |
Msa1236150 | Msa1432060 | 0.815037 | 1.134753e-51 | -8.615850e-47 |
Msa1254420 | Msa1432060 | 0.844252 | 8.484033e-59 | -8.615850e-47 |
Msa1267930 | Msa1432060 | 0.818640 | 1.763914e-52 | -8.615850e-47 |
Msa1294460 | Msa1432060 | 0.813712 | 2.227340e-51 | -8.615850e-47 |
Msa1294790 | Msa1432060 | 0.851997 | 6.162398e-61 | -8.615850e-47 |
Msa1301820 | Msa1432060 | 0.810761 | 9.814901e-51 | -8.615850e-47 |
Msa1331650 | Msa1432060 | 0.809118 | 2.216061e-50 | -8.615850e-47 |
Msa1339230 | Msa1432060 | 0.831035 | 2.097540e-55 | -8.615850e-47 |
Msa0373170 | Msa1432060 | 0.861107 | 1.293942e-63 | -8.615850e-47 |
Msa0382230 | Msa1432060 | 0.826827 | 2.190477e-54 | -8.615850e-47 |
Msa0383940 | Msa1432060 | 0.820757 | 5.795523e-53 | -8.615850e-47 |
Msa0392570 | Msa1432060 | 0.843042 | 1.787223e-58 | -8.615850e-47 |
Msa0404770 | Msa1432060 | 0.803298 | 3.727021e-49 | -8.615850e-47 |
Msa0405080 | Msa1432060 | 0.802705 | 4.942550e-49 | -8.615850e-47 |
Msa0412130 | Msa1432060 | 0.805587 | 1.241999e-49 | -8.615850e-47 |
Msa0415820 | Msa1432060 | 0.817469 | 3.245372e-52 | -8.615850e-47 |
Msa0420430 | Msa1432060 | 0.818420 | 1.978290e-52 | -8.615850e-47 |
Msa0421130 | Msa1432060 | 0.803424 | 3.509803e-49 | -8.615850e-47 |
Msa0421750 | Msa1432060 | 0.859654 | 3.560999e-63 | -8.615850e-47 |
Msa0429970 | Msa1432060 | 0.808431 | 3.107003e-50 | -8.615850e-47 |
Msa0433630 | Msa1432060 | 0.819427 | 1.168369e-52 | -8.615850e-47 |
Msa0433760 | Msa1432060 | 0.814014 | 1.911728e-51 | -8.615850e-47 |
Msa0434360 | Msa1432060 | 0.811594 | 6.475083e-51 | -8.615850e-47 |
Msa0456670 | Msa1432060 | 0.818571 | 1.828852e-52 | -8.615850e-47 |
Msa0461550 | Msa1432060 | 0.832561 | 8.812199e-56 | -8.615850e-47 |
Msa0466520 | Msa1432060 | 0.825304 | 5.042027e-54 | -8.615850e-47 |
Msa0467690 | Msa1432060 | 0.862480 | 4.919103e-64 | -8.615850e-47 |
Msa0470150 | Msa1432060 | 0.809008 | 2.339656e-50 | -8.615850e-47 |
Msa0477630 | Msa1432060 | 0.812259 | 4.639853e-51 | -8.615850e-47 |
Msa0999950 | Msa1432060 | 0.816330 | 5.847441e-52 | -8.615850e-47 |
Msa1000780 | Msa1432060 | 0.839129 | 1.905717e-57 | -8.615850e-47 |
Msa1008670 | Msa1432060 | 0.828479 | 8.785571e-55 | -8.615850e-47 |
Msa1008850 | Msa1432060 | 0.823781 | 1.151064e-53 | -8.615850e-47 |
Msa1071410 | Msa1432060 | 0.837250 | 5.808291e-57 | -8.615850e-47 |
Msa1076020 | Msa1432060 | 0.832584 | 8.695793e-56 | -8.615850e-47 |
Msa1078080 | Msa1432060 | 0.819639 | 1.045069e-52 | -8.615850e-47 |
Msa1078860 | Msa1432060 | 0.827293 | 1.695081e-54 | -8.615850e-47 |
Msa1078990 | Msa1432060 | 0.826642 | 2.425925e-54 | -8.615850e-47 |
Msa1081110 | Msa1432060 | 0.880387 | 5.723880e-70 | -8.615850e-47 |
Msa1082380 | Msa1432060 | 0.813736 | 2.200440e-51 | -8.615850e-47 |
Msa1106220 | Msa1432060 | 0.829216 | 5.826346e-55 | -8.615850e-47 |
Msa0249870 | Msa1432060 | 0.837607 | 4.705056e-57 | -8.615850e-47 |
Msa0260570 | Msa1432060 | 0.854767 | 9.883238e-62 | -8.615850e-47 |
Msa0260630 | Msa1432060 | 0.875503 | 2.928137e-68 | -8.615850e-47 |
Msa0270680 | Msa1432060 | 0.807923 | 3.987194e-50 | -8.615850e-47 |
Msa0281540 | Msa1432060 | 0.869399 | 3.188303e-66 | -8.615850e-47 |
Msa0288400 | Msa1432060 | 0.812170 | 4.851408e-51 | -8.615850e-47 |
Msa0320290 | Msa1432060 | 0.800992 | 1.110970e-48 | -8.615850e-47 |
Msa0320580 | Msa1432060 | 0.868200 | 7.792854e-66 | -8.615850e-47 |
Msa0342220 | Msa1432060 | 0.814100 | 1.829280e-51 | -8.615850e-47 |
Msa0344110 | Msa1432060 | 0.870972 | 9.739326e-67 | -8.615850e-47 |
Msa1119380 | Msa1432060 | 0.994865 | 6.894059e-211 | -8.615850e-47 |
Msa1127280 | Msa1432060 | 0.804346 | 2.257783e-49 | -8.615850e-47 |
Msa1138800 | Msa1432060 | 0.822156 | 2.754380e-53 | -8.615850e-47 |
Msa1144990 | Msa1432060 | 0.837691 | 4.476800e-57 | -8.615850e-47 |
Msa1147560 | Msa1432060 | 0.817483 | 3.221049e-52 | -8.615850e-47 |
Msa1149450 | Msa1432060 | 0.807578 | 4.720409e-50 | -8.615850e-47 |
Msa1160930 | Msa1432060 | 0.807899 | 4.034674e-50 | -8.615850e-47 |
Msa1163180 | Msa1432060 | 0.836260 | 1.038494e-56 | -8.615850e-47 |
Msa1165480 | Msa1432060 | 0.819178 | 1.330920e-52 | -8.615850e-47 |
Msa1166820 | Msa1432060 | 0.993377 | 2.594984e-199 | -8.615850e-47 |
Msa1166910 | Msa1432060 | 0.856748 | 2.608097e-62 | -8.615850e-47 |
Msa1169170 | Msa1432060 | 0.829232 | 5.775606e-55 | -8.615850e-47 |
Msa1169690 | Msa1432060 | 0.812817 | 3.502882e-51 | -8.615850e-47 |
Msa1190390 | Msa1432060 | 0.812256 | 4.645658e-51 | -8.615850e-47 |
Msa1191000 | Msa1432060 | 0.818435 | 1.962794e-52 | -8.615850e-47 |
Msa1212920 | Msa1432060 | 0.823578 | 1.284652e-53 | -8.615850e-47 |
Msa1215980 | Msa1432060 | 0.823835 | 1.118022e-53 | -8.615850e-47 |
Msa0487950 | Msa1432060 | 0.807366 | 5.235316e-50 | -8.615850e-47 |
Msa0506880 | Msa1432060 | 0.831125 | 1.992709e-55 | -8.615850e-47 |
Msa0507810 | Msa1432060 | 0.833952 | 3.967886e-56 | -8.615850e-47 |
Msa0507820 | Msa1432060 | 0.841309 | 5.138542e-58 | -8.615850e-47 |
Msa0507920 | Msa1432060 | 0.832708 | 8.104259e-56 | -8.615850e-47 |
Msa0513620 | Msa1432060 | 0.804258 | 2.354920e-49 | -8.615850e-47 |
Msa0514020 | Msa1432060 | 0.854869 | 9.233803e-62 | -8.615850e-47 |
Msa0520680 | Msa1432060 | 0.829997 | 3.762602e-55 | -8.615850e-47 |
Msa0521510 | Msa1432060 | 0.811033 | 8.570892e-51 | -8.615850e-47 |
Msa0527850 | Msa1432060 | 0.833089 | 6.513602e-56 | -8.615850e-47 |
Msa0541740 | Msa1432060 | 0.821720 | 3.475823e-53 | -8.615850e-47 |
Msa0544410 | Msa1432060 | 0.842787 | 2.088664e-58 | -8.615850e-47 |
Msa0554300 | Msa1432060 | 0.856056 | 4.163399e-62 | -8.615850e-47 |
Msa0561560 | Msa1432060 | 0.844200 | 8.761030e-59 | -8.615850e-47 |
Msa0563900 | Msa1432060 | 0.834217 | 3.404434e-56 | -8.615850e-47 |
Msa0564980 | Msa1432060 | 0.828471 | 8.827698e-55 | -8.615850e-47 |
Msa0572830 | Msa1432060 | 0.864920 | 8.592648e-65 | -8.615850e-47 |
Msa0576330 | Msa1432060 | 0.800316 | 1.526051e-48 | -8.615850e-47 |
Msa0577330 | Msa1432060 | 0.806783 | 6.956292e-50 | -8.615850e-47 |
Msa0582460 | Msa1432060 | 0.838779 | 2.348266e-57 | -8.615850e-47 |
Msa0586200 | Msa1432060 | 0.837200 | 5.979466e-57 | -8.615850e-47 |
Msa0846900 | Msa1432060 | 0.805007 | 1.643117e-49 | -8.615850e-47 |
Msa0861440 | Msa1432060 | 0.802545 | 5.332336e-49 | -8.615850e-47 |
Msa0897790 | Msa1432060 | 0.805583 | 1.244714e-49 | -8.615850e-47 |
Msa0900090 | Msa1432060 | 0.833175 | 6.202706e-56 | -8.615850e-47 |
Msa0926310 | Msa1432060 | 0.830483 | 2.862598e-55 | -8.615850e-47 |
Msa0926760 | Msa1432060 | 0.812536 | 4.035720e-51 | -8.615850e-47 |
Msa0929900 | Msa1432060 | 0.814439 | 1.539599e-51 | -8.615850e-47 |
Msa0965470 | Msa1432060 | 0.805269 | 1.448550e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432060 | MtrunA17_Chr7g0267981 | 93.489 | 599 | 10 | 2 | 1 | 570 | 1 | 599 | 0.0 | 1125 |
Msa1432060 | MtrunA17_Chr7g0225851 | 56.979 | 609 | 101 | 23 | 1 | 570 | 1 | 487 | 0.0 | 537 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1432060 | AT3G54750.4 | 41.503 | 612 | 266 | 9 | 23 | 569 | 5 | 589 | 6.54e-147 | 436 |
Msa1432060 | AT3G54750.1 | 41.340 | 612 | 266 | 9 | 23 | 569 | 5 | 588 | 4.25e-146 | 434 |
Msa1432060 | AT3G54750.2 | 41.340 | 612 | 266 | 9 | 23 | 569 | 5 | 588 | 4.25e-146 | 434 |
Msa1432060 | AT3G54750.5 | 41.436 | 613 | 265 | 10 | 23 | 569 | 5 | 589 | 9.67e-145 | 431 |
Msa1432060 | AT3G54750.3 | 41.436 | 613 | 265 | 10 | 23 | 569 | 5 | 589 | 9.67e-145 | 431 |
Find 154 sgRNAs with CRISPR-Local
Find 571 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAACACGCTCTTACAATTT+TGG | 0.141532 | tig0026928:-50607 | None:intergenic |
TTAAGAAACCAGGATTATTT+AGG | 0.170968 | tig0026928:+42434 | Msa1432060:CDS |
TTTATGTAGCATTGAAATTA+AGG | 0.194384 | tig0026928:+49403 | Msa1432060:CDS |
TAATTTAAAATGAAAATAAT+TGG | 0.218201 | tig0026928:-41688 | None:intergenic |
TCAGCTGTTGATAGATCTTC+TGG | 0.224294 | tig0026928:+42932 | Msa1432060:CDS |
CGGCTAATAATGGGTCTATT+TGG | 0.239647 | tig0026928:+49342 | Msa1432060:CDS |
CTGAAAACCAGCAATGATTC+TGG | 0.249867 | tig0026928:-48786 | None:intergenic |
TTGACCTATTACTGAATTAC+AGG | 0.250085 | tig0026928:+48835 | Msa1432060:CDS |
GAAGATATTGCGGCTAATAA+TGG | 0.271803 | tig0026928:+49332 | Msa1432060:CDS |
AGTAGCTACTTTCGCCATTC+AGG | 0.272636 | tig0026928:-42029 | None:intergenic |
CAAATGACAGAAATCATATT+TGG | 0.275720 | tig0026928:-50659 | None:intergenic |
GGTAAGCATTTAAATAAATT+AGG | 0.288377 | tig0026928:-50535 | None:intergenic |
ATTCGAAACGGTGTTTCTAT+TGG | 0.298594 | tig0026928:+42082 | Msa1432060:CDS |
CTTACCTGTAATTCAGTAAT+AGG | 0.301616 | tig0026928:-48839 | None:intergenic |
GCAAGTTACAACTGAGGATT+TGG | 0.306169 | tig0026928:+48042 | Msa1432060:CDS |
GTTTCGAATTCGGTGAGAAC+TGG | 0.310383 | tig0026928:-42068 | None:intergenic |
AAATAGAATTGGAGTTCTTA+AGG | 0.314290 | tig0026928:+45107 | Msa1432060:intron |
TAGAAACACCGTTTCGAATT+CGG | 0.316399 | tig0026928:-42078 | None:intergenic |
ATAAGCATTGCATGAACATT+TGG | 0.321160 | tig0026928:-46775 | None:intergenic |
TAAGAAACCAGGATTATTTA+GGG | 0.327895 | tig0026928:+42435 | Msa1432060:CDS |
CAGTGAACATCACAATAAAC+TGG | 0.329835 | tig0026928:-46731 | None:intergenic |
ACCTGGCAAGAAGGCTCCTT+TGG | 0.335017 | tig0026928:+43206 | Msa1432060:CDS |
TTACTAGTTTGCTCCATAGA+TGG | 0.340079 | tig0026928:-42662 | None:intergenic |
GGCATCAATATGATGAAAAT+AGG | 0.354374 | tig0026928:-50514 | None:intergenic |
ATTCAATCTCCCGCTACGTT+AGG | 0.360857 | tig0026928:+41834 | Msa1432060:five_prime_UTR |
TACCAAGGATGGTGTGTTGC+AGG | 0.368424 | tig0026928:+42850 | Msa1432060:CDS |
CTTGGACCGCGTGGTGATAA+TGG | 0.369016 | tig0026928:+43105 | Msa1432060:CDS |
GAAGACGTAACTGCAGCTTC+TGG | 0.379959 | tig0026928:-50400 | None:intergenic |
AGCCCATCAATGCACATATA+CGG | 0.387724 | tig0026928:-49454 | None:intergenic |
CAGCCGTATATGTGCATTGA+TGG | 0.392186 | tig0026928:+49451 | Msa1432060:CDS |
AAGATATTGCGGCTAATAAT+GGG | 0.398168 | tig0026928:+49333 | Msa1432060:CDS |
TGTTCAGGAAAATCCATCTA+TGG | 0.404540 | tig0026928:+42649 | Msa1432060:intron |
AGGGGATACTATTCGCATAC+TGG | 0.405603 | tig0026928:-43244 | None:intergenic |
TAAGGAAACGGCAAGTGGCT+TGG | 0.428810 | tig0026928:+45125 | Msa1432060:CDS |
CAGTTTATTGTGATGTTCAC+TGG | 0.431777 | tig0026928:+46732 | Msa1432060:CDS |
TTCAATCTCCCGCTACGTTA+GGG | 0.433085 | tig0026928:+41835 | Msa1432060:five_prime_UTR |
CCCGATGGAATCTTAAACCT+CGG | 0.436019 | tig0026928:-42508 | None:intergenic |
CGCCTGCAACACACCATCCT+TGG | 0.438483 | tig0026928:-42852 | None:intergenic |
AGAAGGCGGAAGAACAGATT+GGG | 0.438610 | tig0026928:-44953 | None:intergenic |
TAATAGCCCAGAATCATTGC+TGG | 0.440353 | tig0026928:+48779 | Msa1432060:CDS |
ATGGGAAGAACCGAGAAAAT+CGG | 0.441212 | tig0026928:-41783 | None:intergenic |
TTTGCACAAGGATCATTAGA+TGG | 0.442251 | tig0026928:+49377 | Msa1432060:CDS |
GCAGAACTTTGGAACGGAAC+AGG | 0.445768 | tig0026928:-49020 | None:intergenic |
AAGGAAACGGCAAGTGGCTT+GGG | 0.452290 | tig0026928:+45126 | Msa1432060:CDS |
GTGTCTCTGAGGTGGACAAT+AGG | 0.452787 | tig0026928:+42410 | Msa1432060:intron |
AACTAACTTTGCTGAACCAC+TGG | 0.455460 | tig0026928:-42311 | None:intergenic |
TGGGAAGAACCGAGAAAATC+GGG | 0.459046 | tig0026928:-41782 | None:intergenic |
GCCTCTTTGCCGTTCAAAAG+AGG | 0.462275 | tig0026928:+48018 | Msa1432060:CDS |
AGAGACAGCAAGGGGTTTCA+CGG | 0.466552 | tig0026928:+42723 | Msa1432060:CDS |
ATGACCTCTATTACATGCTT+CGG | 0.466766 | tig0026928:+45161 | Msa1432060:CDS |
CCGAGGTTTAAGATTCCATC+GGG | 0.467403 | tig0026928:+42508 | Msa1432060:CDS |
TTCACTGGTGGCGATGGCTC+TGG | 0.470881 | tig0026928:+46747 | Msa1432060:CDS |
AATTGGAGTTCTTAAGGAAA+CGG | 0.472450 | tig0026928:+45113 | Msa1432060:CDS |
CTCAACACTGATATGATAGA+AGG | 0.475132 | tig0026928:-44970 | None:intergenic |
AATATGATTTCTGTCATTTG+AGG | 0.477467 | tig0026928:+50662 | Msa1432060:three_prime_UTR |
TGAAAACCAGCAATGATTCT+GGG | 0.481029 | tig0026928:-48785 | None:intergenic |
TCCAAAGGAGCCTTCTTGCC+AGG | 0.481682 | tig0026928:-43207 | None:intergenic |
GATAAGTCAGAGCAGAACTT+TGG | 0.481909 | tig0026928:-49031 | None:intergenic |
CTCTGAAGGGAGGAGCTTTG+AGG | 0.485787 | tig0026928:+49475 | Msa1432060:CDS |
TAGAAGGCGGAAGAACAGAT+TGG | 0.489932 | tig0026928:-44954 | None:intergenic |
AGAGAATGACCTTGAGCGCC+GGG | 0.492279 | tig0026928:-48748 | None:intergenic |
AGTCGTGTATCATTGTATCT+AGG | 0.496935 | tig0026928:-42460 | None:intergenic |
TTTCGAATTCGGTGAGAACT+GGG | 0.497996 | tig0026928:-42067 | None:intergenic |
AGCGGTGTCGTATCAGTGAA+TGG | 0.499328 | tig0026928:-41802 | None:intergenic |
TAACAATGATCTAAAACCTC+TGG | 0.503353 | tig0026928:-46811 | None:intergenic |
TCCACGTCCATCGGATGAAT+CGG | 0.504224 | tig0026928:-43136 | None:intergenic |
ATTACAAATACATGACTTGT+GGG | 0.509580 | tig0026928:-50629 | None:intergenic |
TTGGAGAAATCTGCTACCTC+AGG | 0.513340 | tig0026928:+42821 | Msa1432060:CDS |
AAATCTGAATCAAAAGCTGC+TGG | 0.516205 | tig0026928:+50337 | Msa1432060:CDS |
AGAGGAAGAATTTACTGCAA+TGG | 0.517278 | tig0026928:-43172 | None:intergenic |
TAGTTAATAGTTGATGTATG+TGG | 0.518916 | tig0026928:-50704 | None:intergenic |
TTGAGAGGACTAGCCTCGCT+TGG | 0.519123 | tig0026928:+43087 | Msa1432060:CDS |
TGCTGAATCTCCACGTCCAT+CGG | 0.520790 | tig0026928:-43145 | None:intergenic |
CAAAGCAACATTCAGTCCAC+TGG | 0.521488 | tig0026928:-50299 | None:intergenic |
CTAGGCGCCCTAAATAATCC+TGG | 0.524786 | tig0026928:-42442 | None:intergenic |
ATCAACAGCTGAAGAAAGAT+CGG | 0.533488 | tig0026928:-42921 | None:intergenic |
GAAGAATTTACTGCAATGGT+TGG | 0.533738 | tig0026928:-43168 | None:intergenic |
GCTGGCAGTGAAAGCTTGCG+AGG | 0.536250 | tig0026928:+50355 | Msa1432060:CDS |
AGGATACATTTATTCCACCT+TGG | 0.536590 | tig0026928:+49423 | Msa1432060:CDS |
TCTTTCCTAGATTAAATGCA+TGG | 0.539258 | tig0026928:+49295 | Msa1432060:intron |
TAAATGCTTACCCTTCCGAT+TGG | 0.539310 | tig0026928:+50546 | Msa1432060:three_prime_UTR |
CAGAGAATGACCTTGAGCGC+CGG | 0.540235 | tig0026928:-48749 | None:intergenic |
GTTTAAGATTCCATCGGGGA+AGG | 0.546998 | tig0026928:+42513 | Msa1432060:CDS |
TCCTCTGAATGTCATATACC+TGG | 0.554170 | tig0026928:+43189 | Msa1432060:CDS |
GAACTGGGAGGCATAGCACT+TGG | 0.555818 | tig0026928:-42052 | None:intergenic |
GGAACAGGAGAACACAAGAC+AGG | 0.558626 | tig0026928:-49005 | None:intergenic |
ATGTGTAAATACCATAAAAG+AGG | 0.561034 | tig0026928:-45198 | None:intergenic |
GCGGTGTCGTATCAGTGAAT+GGG | 0.562441 | tig0026928:-41801 | None:intergenic |
TATTTGCAGTGTCTCTGAGG+TGG | 0.563464 | tig0026928:+42402 | Msa1432060:intron |
GCCGAGGTTTAAGATTCCAT+CGG | 0.568404 | tig0026928:+42507 | Msa1432060:CDS |
TTCGAAGGAGACCAATCGGA+AGG | 0.568594 | tig0026928:-50557 | None:intergenic |
TATTACAAATACATGACTTG+TGG | 0.570122 | tig0026928:-50630 | None:intergenic |
ACCGATTCATCCGATGGACG+TGG | 0.572736 | tig0026928:+43135 | Msa1432060:CDS |
GTGACTGAACCGGTCTCCAG+TGG | 0.576955 | tig0026928:+50283 | Msa1432060:CDS |
TGTGCATTGATGGGCTCTGA+AGG | 0.577752 | tig0026928:+49461 | Msa1432060:CDS |
TGCTTGTTGTAATTCCTGAA+TGG | 0.578304 | tig0026928:+42015 | Msa1432060:exon |
TCTTCCGAAGCATGTAATAG+AGG | 0.579226 | tig0026928:-45165 | None:intergenic |
GTGATGTTCACTGGTGGCGA+TGG | 0.579761 | tig0026928:+46741 | Msa1432060:CDS |
TTATATTTGCAGTGTCTCTG+AGG | 0.580757 | tig0026928:+42399 | Msa1432060:intron |
ATGTCATATACCTGGCAAGA+AGG | 0.580964 | tig0026928:+43197 | Msa1432060:CDS |
TTGAGCTCATCAACTGCAGA+AGG | 0.583441 | tig0026928:+44988 | Msa1432060:CDS |
GCCAGGTATATGACATTCAG+AGG | 0.584588 | tig0026928:-43190 | None:intergenic |
CGTGACCTCACTGTCTAGTG+TGG | 0.586021 | tig0026928:+48977 | Msa1432060:CDS |
GACAATAGGTTTAAGAAACC+AGG | 0.586658 | tig0026928:+42424 | Msa1432060:CDS |
TCAGGAGAGGTTACCAAGGA+TGG | 0.588304 | tig0026928:+42839 | Msa1432060:CDS |
AGATTGAATTCGACGAAAAG+CGG | 0.589352 | tig0026928:-41820 | None:intergenic |
AGTGGCAGCAACAATGTGCA+TGG | 0.589761 | tig0026928:+48807 | Msa1432060:CDS |
ACATTCAGTCCACTGGAGAC+CGG | 0.590911 | tig0026928:-50292 | None:intergenic |
CATGTAATAGAGGTCATGAA+AGG | 0.594277 | tig0026928:-45155 | None:intergenic |
AAAAGTGTAAAGTACTGTGA+TGG | 0.597080 | tig0026928:+50442 | Msa1432060:CDS |
AAGGGAGGAGCTTTGAGGCA+AGG | 0.597578 | tig0026928:+49480 | Msa1432060:CDS |
AGCCGTATATGTGCATTGAT+GGG | 0.598883 | tig0026928:+49452 | Msa1432060:CDS |
ATCACCACGCGGTCCAAGCG+AGG | 0.599331 | tig0026928:-43100 | None:intergenic |
CAAGGATGGTGTGTTGCAGG+CGG | 0.599736 | tig0026928:+42853 | Msa1432060:CDS |
AAGGATGGTGTGTTGCAGGC+GGG | 0.603714 | tig0026928:+42854 | Msa1432060:CDS |
ATACATCAACTATTAACTAA+CGG | 0.605716 | tig0026928:+50708 | Msa1432060:three_prime_UTR |
AGTTCTCACCGAATTCGAAA+CGG | 0.607334 | tig0026928:+42070 | Msa1432060:CDS |
TGCAGCTTCTGGAATGCCAA+AGG | 0.610616 | tig0026928:-50389 | None:intergenic |
AAACGTACCCTAAGTTCTGA+AGG | 0.611789 | tig0026928:-42118 | None:intergenic |
GAGAAGAGCTGAAGATATTG+CGG | 0.612061 | tig0026928:+49322 | Msa1432060:CDS |
TATATTTCTCAGTCAACCAG+AGG | 0.614438 | tig0026928:+46795 | Msa1432060:CDS |
ATGCTTCGGAAGAACATATG+TGG | 0.616374 | tig0026928:+45175 | Msa1432060:CDS |
CATATACGGCTGATAATCCA+AGG | 0.618143 | tig0026928:-49440 | None:intergenic |
TCGGTGGTTAAGAGACAGCA+AGG | 0.620054 | tig0026928:+42713 | Msa1432060:CDS |
CGGTGGTTAAGAGACAGCAA+GGG | 0.621190 | tig0026928:+42714 | Msa1432060:CDS |
TTAGCTACCGATTCATCCGA+TGG | 0.624246 | tig0026928:+43129 | Msa1432060:CDS |
AAAGATAACGAGTTTGCACA+AGG | 0.627297 | tig0026928:+49365 | Msa1432060:CDS |
AGCTCATCAACTGCAGAAGG+AGG | 0.628000 | tig0026928:+44991 | Msa1432060:CDS |
ATCGGGGAAGGAAAATGTGA+AGG | 0.629437 | tig0026928:+42525 | Msa1432060:CDS |
ATCCTTGGTAACCTCTCCTG+AGG | 0.635914 | tig0026928:-42837 | None:intergenic |
GAAGGCGGAAGAACAGATTG+GGG | 0.643801 | tig0026928:-44952 | None:intergenic |
ACTGGATTGAGAACATTCAT+CGG | 0.646151 | tig0026928:-42293 | None:intergenic |
AGTGAACATCACAATAAACT+GGG | 0.650061 | tig0026928:-46730 | None:intergenic |
AACACTGATATGATAGAAGG+CGG | 0.654535 | tig0026928:-44967 | None:intergenic |
GTCAGAGCAGAACTTTGGAA+CGG | 0.655766 | tig0026928:-49026 | None:intergenic |
TCGAAGGAGACCAATCGGAA+GGG | 0.655768 | tig0026928:-50556 | None:intergenic |
TTTATTGTGATGTTCACTGG+TGG | 0.661733 | tig0026928:+46735 | Msa1432060:CDS |
GAAATCTGCTACCTCAGGAG+AGG | 0.663455 | tig0026928:+42826 | Msa1432060:CDS |
GTTCTTAAGGAAACGGCAAG+TGG | 0.664215 | tig0026928:+45120 | Msa1432060:CDS |
CATTGATGGGCTCTGAAGGG+AGG | 0.664242 | tig0026928:+49465 | Msa1432060:CDS |
TGGAGCAGTAAATATTGACA+TGG | 0.669718 | tig0026928:+42952 | Msa1432060:CDS |
GGTGGTTAAGAGACAGCAAG+GGG | 0.670056 | tig0026928:+42715 | Msa1432060:CDS |
GATGAATGTTCTCAATCCAG+TGG | 0.671105 | tig0026928:+42295 | Msa1432060:CDS |
GTGCATTGATGGGCTCTGAA+GGG | 0.672288 | tig0026928:+49462 | Msa1432060:CDS |
ATTGAAGCGAGAAAGTGTCG+TGG | 0.691528 | tig0026928:+42264 | Msa1432060:CDS |
TACCTCAGGAGAGGTTACCA+AGG | 0.699417 | tig0026928:+42835 | Msa1432060:CDS |
AGAGGAGCAAGTTACAACTG+AGG | 0.701608 | tig0026928:+48036 | Msa1432060:CDS |
CGAATTCGGTGAGAACTGGG+AGG | 0.706927 | tig0026928:-42064 | None:intergenic |
ATTGAGAACATTCATCGGTG+AGG | 0.709288 | tig0026928:-42288 | None:intergenic |
TTGAGTGTACCCTAACGTAG+CGG | 0.711398 | tig0026928:-41844 | None:intergenic |
AACGTCCACACTAGACAGTG+AGG | 0.727809 | tig0026928:-48982 | None:intergenic |
ATACGGCTGATAATCCAAGG+TGG | 0.770014 | tig0026928:-49437 | None:intergenic |
CGAGGTTTAAGATTCCATCG+GGG | 0.798890 | tig0026928:+42509 | Msa1432060:CDS |
GCTAATCCATTATCACCACG+CGG | 0.807615 | tig0026928:-43111 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAATTAAAATAATTAAGAAG+CGG | - | tig0026928:42344-42363 | None:intergenic | 10.0% |
!!! | AAAAAAATCTTTTTTATAGT+TGG | - | tig0026928:43360-43379 | None:intergenic | 10.0% |
!!! | AAAATTTTACAAAAAAAAAG+TGG | + | tig0026928:43492-43511 | Msa1432060:intron | 10.0% |
!! | ATAATCATAAACAAATTAAA+TGG | - | tig0026928:43723-43742 | None:intergenic | 10.0% |
!!! | ATAATTTTTATTGTTGAAAA+AGG | + | tig0026928:43750-43769 | Msa1432060:intron | 10.0% |
!! | ATTGATATATTTATTTGTAT+TGG | - | tig0026928:43813-43832 | None:intergenic | 10.0% |
!! | TATTTAATAAAAAGGAAAAA+TGG | - | tig0026928:45092-45111 | None:intergenic | 10.0% |
!! | TTAATTTAATTATTAACACA+AGG | - | tig0026928:46242-46261 | None:intergenic | 10.0% |
!!! | ATTTTCATCATAATAATAAA+CGG | - | tig0026928:46523-46542 | None:intergenic | 10.0% |
!!! | ATTTTAGTAATAGAAAAAAT+GGG | - | tig0026928:49718-49737 | None:intergenic | 10.0% |
!!! | AATTTTAGTAATAGAAAAAA+TGG | - | tig0026928:49719-49738 | None:intergenic | 10.0% |
!!! | TTTTTCTATTACTAAAATTT+CGG | + | tig0026928:49720-49739 | Msa1432060:intron | 10.0% |
!!! | CCTAAAAAATTATAATTTGT+GGG | - | tig0026928:43429-43448 | None:intergenic | 15.0% |
!! | ACCTAAAAAATTATAATTTG+TGG | - | tig0026928:43430-43449 | None:intergenic | 15.0% |
!! | TAATCTCTAACAAAAAATTA+AGG | + | tig0026928:43530-43549 | Msa1432060:intron | 15.0% |
!!! | TTTTTGCAACTAAATTTATT+TGG | + | tig0026928:43869-43888 | Msa1432060:intron | 15.0% |
!!! | TTTTGCAACTAAATTTATTT+GGG | + | tig0026928:43870-43889 | Msa1432060:intron | 15.0% |
!! | AAAAAATATTATTCATGAAG+TGG | - | tig0026928:43945-43964 | None:intergenic | 15.0% |
!!! | CATGAATAATATTTTTTTTG+AGG | + | tig0026928:43948-43967 | Msa1432060:intron | 15.0% |
!!! | AATTAAATGATCTTTTATAC+AGG | - | tig0026928:44129-44148 | None:intergenic | 15.0% |
!! | AACAAATCAAATAAATAAGA+GGG | - | tig0026928:44718-44737 | None:intergenic | 15.0% |
!! | AAACAAATCAAATAAATAAG+AGG | - | tig0026928:44719-44738 | None:intergenic | 15.0% |
!!! | TCCTTTTTATTAAATAGAAT+TGG | + | tig0026928:45096-45115 | Msa1432060:intron | 15.0% |
!! | TCCAATTCTATTTAATAAAA+AGG | - | tig0026928:45100-45119 | None:intergenic | 15.0% |
!! | AAATGTTTGACTAATAAATT+GGG | - | tig0026928:45390-45409 | None:intergenic | 15.0% |
!! | AAAATGTTTGACTAATAAAT+TGG | - | tig0026928:45391-45410 | None:intergenic | 15.0% |
!!! | TTGAAAGTTTCTAAAATTTA+AGG | - | tig0026928:45524-45543 | None:intergenic | 15.0% |
!!! | TTTTCATCATAATAATAAAC+GGG | - | tig0026928:46522-46541 | None:intergenic | 15.0% |
!!! | TAATCATATTTTTTCATTGA+TGG | + | tig0026928:46981-47000 | Msa1432060:intron | 15.0% |
!!! | AAAATGTAGTTTTTACAAAT+CGG | + | tig0026928:47242-47261 | Msa1432060:intron | 15.0% |
!! | AGTTAATACTAATACTAATT+AGG | - | tig0026928:48339-48358 | None:intergenic | 15.0% |
!! | TTAGTATTAACTGAATTATT+TGG | + | tig0026928:48347-48366 | Msa1432060:intron | 15.0% |
!! | AACAACATATAATTAAAAGA+TGG | - | tig0026928:48405-48424 | None:intergenic | 15.0% |
!! | ATATAAATAGAGCTTAAATA+TGG | - | tig0026928:48687-48706 | None:intergenic | 15.0% |
!! | ATATTTAAGCTCTATTTATA+TGG | + | tig0026928:48686-48705 | Msa1432060:intron | 15.0% |
!!! | ATTGATTTATGTTTTTCATT+TGG | + | tig0026928:48714-48733 | Msa1432060:intron | 15.0% |
!! | TTATTTAAATTGACAAATTG+CGG | - | tig0026928:49127-49146 | None:intergenic | 15.0% |
!! | TAAAATGTAATTGTTTAGAT+AGG | + | tig0026928:49541-49560 | Msa1432060:intron | 15.0% |
!!! | GGTTTATTGAATTTTATTTT+AGG | + | tig0026928:49639-49658 | Msa1432060:intron | 15.0% |
!!! | TTTTAGTAATAGAAAAAATG+GGG | - | tig0026928:49717-49736 | None:intergenic | 15.0% |
!!! | TTTTCTATTACTAAAATTTC+GGG | + | tig0026928:49721-49740 | Msa1432060:intron | 15.0% |
!! | TGTATTATTACAAATAAAGA+TGG | + | tig0026928:49860-49879 | Msa1432060:intron | 15.0% |
!! | GTATTATTACAAATAAAGAT+GGG | + | tig0026928:49861-49880 | Msa1432060:intron | 15.0% |
!!! | TTATAACTGCATTTTAACTT+AGG | + | tig0026928:42152-42171 | Msa1432060:intron | 20.0% |
!!! | TATAACTGCATTTTAACTTA+GGG | + | tig0026928:42153-42172 | Msa1432060:intron | 20.0% |
!!! | CCCACAAATTATAATTTTTT+AGG | + | tig0026928:43426-43445 | Msa1432060:intron | 20.0% |
!! | TAAAAAACTGAGACAAAAAT+TGG | - | tig0026928:43473-43492 | None:intergenic | 20.0% |
!! | GACTAAAATTAACAAATCTT+AGG | + | tig0026928:43552-43571 | Msa1432060:intron | 20.0% |
!! | AGACAATTATTGATGTAATT+GGG | - | tig0026928:43632-43651 | None:intergenic | 20.0% |
!! | TAGCTCAATGTTTATTATTT+AGG | + | tig0026928:43894-43913 | Msa1432060:intron | 20.0% |
!! | AGCTCAATGTTTATTATTTA+GGG | + | tig0026928:43895-43914 | Msa1432060:intron | 20.0% |
!!! | ATAAGTGTTTTTATTTGCTT+AGG | - | tig0026928:44038-44057 | None:intergenic | 20.0% |
!!! | ATTCTGAAATAACATGAAAT+TGG | - | tig0026928:44368-44387 | None:intergenic | 20.0% |
!! | ATATGAATGAATTGTTATGT+GGG | - | tig0026928:44636-44655 | None:intergenic | 20.0% |
!! | ATTTCATACTCCTAATTTAT+AGG | + | tig0026928:45345-45364 | Msa1432060:intron | 20.0% |
!! | AATGTTTGACTAATAAATTG+GGG | - | tig0026928:45389-45408 | None:intergenic | 20.0% |
!!! | GTTTCTAAAATTTAAGGTTT+GGG | - | tig0026928:45518-45537 | None:intergenic | 20.0% |
!!! | AGTTTCTAAAATTTAAGGTT+TGG | - | tig0026928:45519-45538 | None:intergenic | 20.0% |
!! | TGGATAGTTATTAGTAATTT+AGG | + | tig0026928:46039-46058 | Msa1432060:intron | 20.0% |
!!! | ATATGAGACTTTAAGATATA+TGG | + | tig0026928:46310-46329 | Msa1432060:intron | 20.0% |
!! | AAATCGTTAACTCATTAATT+CGG | + | tig0026928:47483-47502 | Msa1432060:intron | 20.0% |
!!! | CATATCATTTGTTTTTTTGA+TGG | + | tig0026928:48125-48144 | Msa1432060:intron | 20.0% |
!!! | TTTTTTTTTGACAAGTATAC+TGG | + | tig0026928:48496-48515 | Msa1432060:intron | 20.0% |
!! | ATTATTAAATGAGCTAGAAA+AGG | - | tig0026928:49227-49246 | None:intergenic | 20.0% |
!! | AAAAATATCAACATAGAAAG+TGG | - | tig0026928:49269-49288 | None:intergenic | 20.0% |
!!! | TTTATGTAGCATTGAAATTA+AGG | + | tig0026928:49403-49422 | Msa1432060:CDS | 20.0% |
!! | AATATGTGATTAAGAAAACT+TGG | + | tig0026928:49603-49622 | Msa1432060:intron | 20.0% |
!! | ATATGTGATTAAGAAAACTT+GGG | + | tig0026928:49604-49623 | Msa1432060:intron | 20.0% |
!! | ATATATTATTTACCTGGAAA+TGG | + | tig0026928:49686-49705 | Msa1432060:intron | 20.0% |
!! | TTTCTATTACTAAAATTTCG+GGG | + | tig0026928:49722-49741 | Msa1432060:intron | 20.0% |
!! | GGTAAGCATTTAAATAAATT+AGG | - | tig0026928:50538-50557 | None:intergenic | 20.0% |
!! | ATACATCAACTATTAACTAA+CGG | + | tig0026928:50708-50727 | Msa1432060:three_prime_UTR | 20.0% |
! | TTAAGAAACCAGGATTATTT+AGG | + | tig0026928:42434-42453 | Msa1432060:CDS | 25.0% |
! | TAAGAAACCAGGATTATTTA+GGG | + | tig0026928:42435-42454 | Msa1432060:CDS | 25.0% |
! | AAGTAAACAAATATTAGTCG+TGG | - | tig0026928:42569-42588 | None:intergenic | 25.0% |
! | CATAGTAACAATATCAATCT+TGG | - | tig0026928:42631-42650 | None:intergenic | 25.0% |
! | TTGATATTGTTACTATGTTC+AGG | + | tig0026928:42634-42653 | Msa1432060:intron | 25.0% |
! | ATAAACTATGAAGAAAAGGT+TGG | - | tig0026928:42993-43012 | None:intergenic | 25.0% |
! | GAAGATAAACTATGAAGAAA+AGG | - | tig0026928:42997-43016 | None:intergenic | 25.0% |
!!! | TGCTGAAAAAAACGTTTTTT+AGG | + | tig0026928:43056-43075 | Msa1432060:intron | 25.0% |
!!! | GCTGAAAAAAACGTTTTTTA+GGG | + | tig0026928:43057-43076 | Msa1432060:intron | 25.0% |
!!! | GTTTTTAAAGTAAGATCCAA+AGG | - | tig0026928:43225-43244 | None:intergenic | 25.0% |
! | CCAATATATTAGTCAATCAA+AGG | - | tig0026928:43291-43310 | None:intergenic | 25.0% |
! | CCTTTGATTGACTAATATAT+TGG | + | tig0026928:43288-43307 | Msa1432060:intron | 25.0% |
! | CAGACAATTATTGATGTAAT+TGG | - | tig0026928:43633-43652 | None:intergenic | 25.0% |
!!! | TTGTATTGGTTTGATACTTT+CGG | - | tig0026928:43799-43818 | None:intergenic | 25.0% |
! | AATATTATTCATGAAGTGGT+CGG | - | tig0026928:43941-43960 | None:intergenic | 25.0% |
!! | TATCTATTTTATAGATGCAC+TGG | + | tig0026928:44225-44244 | Msa1432060:intron | 25.0% |
! | ACTTGATAAACATAACAGTT+AGG | + | tig0026928:44255-44274 | Msa1432060:intron | 25.0% |
!! | CAATTGATAATACAAACAAG+GGG | - | tig0026928:44291-44310 | None:intergenic | 25.0% |
!! | CCAATTGATAATACAAACAA+GGG | - | tig0026928:44292-44311 | None:intergenic | 25.0% |
!! | CCTTGTTTGTATTATCAATT+GGG | + | tig0026928:44290-44309 | Msa1432060:intron | 25.0% |
! | CATATGAATGAATTGTTATG+TGG | - | tig0026928:44637-44656 | None:intergenic | 25.0% |
! | TACATAACACAAAAACAGTA+GGG | - | tig0026928:44686-44705 | None:intergenic | 25.0% |
! | AAATCAAATAAATAAGAGGG+TGG | - | tig0026928:44715-44734 | None:intergenic | 25.0% |
! | AACATATGTATCGTAGAATT+AGG | - | tig0026928:44826-44845 | None:intergenic | 25.0% |
! | ATACATATGTTAGTTATGTG+TGG | + | tig0026928:44835-44854 | Msa1432060:intron | 25.0% |
! | AACATAAGGAAAATAGAGAA+AGG | - | tig0026928:45069-45088 | None:intergenic | 25.0% |
! | AAAAGGAAAAATGGAACATA+AGG | - | tig0026928:45083-45102 | None:intergenic | 25.0% |
! | AAATAGAATTGGAGTTCTTA+AGG | + | tig0026928:45107-45126 | Msa1432060:intron | 25.0% |
! | ATGTGTAAATACCATAAAAG+AGG | - | tig0026928:45201-45220 | None:intergenic | 25.0% |
! | TGCAACTAAACCTATAAATT+AGG | - | tig0026928:45358-45377 | None:intergenic | 25.0% |
! | TAATGAAGGGATTAAACTTT+GGG | - | tig0026928:45576-45595 | None:intergenic | 25.0% |
! | TTAATGAAGGGATTAAACTT+TGG | - | tig0026928:45577-45596 | None:intergenic | 25.0% |
!! | ATTTTGTTAGATAGAAGAGA+AGG | + | tig0026928:45747-45766 | Msa1432060:intron | 25.0% |
! | ATATAGGATTGGAGATTATT+TGG | + | tig0026928:46019-46038 | Msa1432060:intron | 25.0% |
! | AACCTAAAGAATATCAAACA+GGG | + | tig0026928:46188-46207 | Msa1432060:intron | 25.0% |
! | TTAATTATTAACACAAGGCA+GGG | - | tig0026928:46237-46256 | None:intergenic | 25.0% |
! | TTTAATTATTAACACAAGGC+AGG | - | tig0026928:46238-46257 | None:intergenic | 25.0% |
! | AACAGTGAAATTATATCAGA+TGG | + | tig0026928:46397-46416 | Msa1432060:intron | 25.0% |
! | ACAGTGAAATTATATCAGAT+GGG | + | tig0026928:46398-46417 | Msa1432060:intron | 25.0% |
! | AATGCTTAATCTAATACTCT+AGG | + | tig0026928:46448-46467 | Msa1432060:intron | 25.0% |
!! | GTGCTACTAAACTTATAAAT+CGG | + | tig0026928:46478-46497 | Msa1432060:intron | 25.0% |
! | TGCTACTAAACTTATAAATC+GGG | + | tig0026928:46479-46498 | Msa1432060:intron | 25.0% |
! | GATTTAGCAATAAAAGAAAC+AGG | - | tig0026928:46549-46568 | None:intergenic | 25.0% |
! | GAAAAAATATGATTATCCTG+AGG | - | tig0026928:46976-46995 | None:intergenic | 25.0% |
!!! | GGAGTATTTTCATAGAAATA+TGG | - | tig0026928:47007-47026 | None:intergenic | 25.0% |
!! | TTATCTGAAAAAAGTGTAGT+AGG | + | tig0026928:47041-47060 | Msa1432060:intron | 25.0% |
! | TTTGTGATTAAAAATGTCAG+TGG | - | tig0026928:47225-47244 | None:intergenic | 25.0% |
! | TGAAAATCATCATAGAATCA+AGG | - | tig0026928:47417-47436 | None:intergenic | 25.0% |
! | AATCGTTAACTCATTAATTC+GGG | + | tig0026928:47484-47503 | Msa1432060:intron | 25.0% |
! | GAAATATAACCACAAAAAAC+TGG | - | tig0026928:47685-47704 | None:intergenic | 25.0% |
! | ATTTAGCCAGATTAAACAAA+TGG | + | tig0026928:47708-47727 | Msa1432060:intron | 25.0% |
! | AAATGTCCATTTGTTTAATC+TGG | - | tig0026928:47717-47736 | None:intergenic | 25.0% |
!! | GATTAAACAAATGGACATTT+TGG | + | tig0026928:47717-47736 | Msa1432060:intron | 25.0% |
! | GATTGTACTTAAAATTGTGA+GGG | - | tig0026928:47873-47892 | None:intergenic | 25.0% |
! | AGATTGTACTTAAAATTGTG+AGG | - | tig0026928:47874-47893 | None:intergenic | 25.0% |
! | TTATCAAAAGAAGCAAAAAG+AGG | - | tig0026928:48277-48296 | None:intergenic | 25.0% |
!! | TCATATATTAAGAGTGTGTT+AGG | - | tig0026928:48452-48471 | None:intergenic | 25.0% |
! | TAGAAAAGGAAAAACAACTA+TGG | - | tig0026928:49213-49232 | None:intergenic | 25.0% |
! | CTCACTATATATTATTTACC+TGG | + | tig0026928:49680-49699 | Msa1432060:intron | 25.0% |
! | ACCTCATAAATTTAGTAGTA+CGG | + | tig0026928:49900-49919 | Msa1432060:intron | 25.0% |
!!! | TTTTTTGAATAAGAGTGTTG+AGG | + | tig0026928:49929-49948 | Msa1432060:intron | 25.0% |
!! | TTTTAGTGTACATGAACATA+GGG | - | tig0026928:50425-50444 | None:intergenic | 25.0% |
!!! | TTTTTAGTGTACATGAACAT+AGG | - | tig0026928:50426-50445 | None:intergenic | 25.0% |
!! | TGTTTTCATGAGATTATACA+GGG | - | tig0026928:50489-50508 | None:intergenic | 25.0% |
!! | TTGTTTTCATGAGATTATAC+AGG | - | tig0026928:50490-50509 | None:intergenic | 25.0% |
!!! | TACCTGTTTTTAATTTTCGA+AGG | - | tig0026928:50575-50594 | None:intergenic | 25.0% |
!! | ATTACAAATACATGACTTGT+GGG | - | tig0026928:50632-50651 | None:intergenic | 25.0% |
! | TATTACAAATACATGACTTG+TGG | - | tig0026928:50633-50652 | None:intergenic | 25.0% |
! | CAAATGACAGAAATCATATT+TGG | - | tig0026928:50662-50681 | None:intergenic | 25.0% |
!! | AATATGATTTCTGTCATTTG+AGG | + | tig0026928:50662-50681 | Msa1432060:three_prime_UTR | 25.0% |
!! | TAGTTAATAGTTGATGTATG+TGG | - | tig0026928:50707-50726 | None:intergenic | 25.0% |
AAAAACACCTTCAGAACTTA+GGG | + | tig0026928:42111-42130 | Msa1432060:CDS | 30.0% | |
! | TCATCTTCGATGTTTTATAC+TGG | + | tig0026928:42230-42249 | Msa1432060:intron | 30.0% |
GAATTAGCAGCAAATTGAAA+CGG | - | tig0026928:42368-42387 | None:intergenic | 30.0% | |
!!! | TGCTTCCATTTTTTCTACTT+CGG | + | tig0026928:42694-42713 | Msa1432060:CDS | 30.0% |
!! | AACAAAAGCATCATCAACAT+AGG | - | tig0026928:42795-42814 | None:intergenic | 30.0% |
CTTCATATCAGATGTTTACT+AGG | + | tig0026928:43013-43032 | Msa1432060:intron | 30.0% | |
ACTAGGATGTATCATGAATA+TGG | + | tig0026928:43030-43049 | Msa1432060:intron | 30.0% | |
AAATCGCTATTTAGAAACGT+TGG | + | tig0026928:43587-43606 | Msa1432060:intron | 30.0% | |
AATCGCTATTTAGAAACGTT+GGG | + | tig0026928:43588-43607 | Msa1432060:intron | 30.0% | |
! | TGTTTATTATTTAGGGTAGC+TGG | + | tig0026928:43902-43921 | Msa1432060:intron | 30.0% |
!!! | TATTTTTTTTGAGGTAGCCA+AGG | + | tig0026928:43957-43976 | Msa1432060:intron | 30.0% |
! | GTTTAAAATAGCAAATAGCG+TGG | + | tig0026928:44080-44099 | Msa1432060:intron | 30.0% |
!! | ACTTGTTACACAAAGTGTTT+TGG | + | tig0026928:44197-44216 | Msa1432060:intron | 30.0% |
! | CCCTTGTTTGTATTATCAAT+TGG | + | tig0026928:44289-44308 | Msa1432060:intron | 30.0% |
! | CCCAATTGATAATACAAACA+AGG | - | tig0026928:44293-44312 | None:intergenic | 30.0% |
! | TCTTTTTCTATCATCCTAAC+AGG | + | tig0026928:44563-44582 | Msa1432060:intron | 30.0% |
AAAAAGTCATGTATCCTGTT+AGG | - | tig0026928:44580-44599 | None:intergenic | 30.0% | |
CTACATAACACAAAAACAGT+AGG | - | tig0026928:44687-44706 | None:intergenic | 30.0% | |
! | CTCATATTTTCATTCCTGTA+AGG | - | tig0026928:44892-44911 | None:intergenic | 30.0% |
TAAATGAGTTAAGTCAGAAG+GGG | - | tig0026928:45025-45044 | None:intergenic | 30.0% | |
GTAAATGAGTTAAGTCAGAA+GGG | - | tig0026928:45026-45045 | None:intergenic | 30.0% | |
TGTAAATGAGTTAAGTCAGA+AGG | - | tig0026928:45027-45046 | None:intergenic | 30.0% | |
AATTGGAGTTCTTAAGGAAA+CGG | + | tig0026928:45113-45132 | Msa1432060:CDS | 30.0% | |
TCCATCTGACAAAAAAGTAA+CGG | - | tig0026928:45226-45245 | None:intergenic | 30.0% | |
! | TTTTTCCACTAAAAGATGTC+AGG | + | tig0026928:45451-45470 | Msa1432060:intron | 30.0% |
TGTGCTTCATATTTAGTATG+TGG | - | tig0026928:45550-45569 | None:intergenic | 30.0% | |
ATCCCTTCATTAATGAAAGA+TGG | + | tig0026928:45584-45603 | Msa1432060:intron | 30.0% | |
TCCCTTCATTAATGAAAGAT+GGG | + | tig0026928:45585-45604 | Msa1432060:intron | 30.0% | |
TCCCATCTTTCATTAATGAA+GGG | - | tig0026928:45589-45608 | None:intergenic | 30.0% | |
TAACTAGTCATTGGATACAA+GGG | - | tig0026928:45645-45664 | None:intergenic | 30.0% | |
ATAACTAGTCATTGGATACA+AGG | - | tig0026928:45646-45665 | None:intergenic | 30.0% | |
TTAGAATGTGACTGACAATT+AGG | - | tig0026928:45786-45805 | None:intergenic | 30.0% | |
CTGAAATTGCTAGAATTGTA+TGG | + | tig0026928:45945-45964 | Msa1432060:intron | 30.0% | |
TCCAATCCTATATACAGATA+AGG | - | tig0026928:46012-46031 | None:intergenic | 30.0% | |
CTGTTTGATATTCTTTAGGT+TGG | - | tig0026928:46189-46208 | None:intergenic | 30.0% | |
CAACCTAAAGAATATCAAAC+AGG | + | tig0026928:46187-46206 | Msa1432060:intron | 30.0% | |
TAATTATTAACACAAGGCAG+GGG | - | tig0026928:46236-46255 | None:intergenic | 30.0% | |
TGTATTCTTAAGTAGTACAC+AGG | + | tig0026928:46287-46306 | Msa1432060:intron | 30.0% | |
! | CTTAATCTAATACTCTAGGA+TGG | + | tig0026928:46452-46471 | Msa1432060:intron | 30.0% |
GCTACTAAACTTATAAATCG+GGG | + | tig0026928:46480-46499 | Msa1432060:intron | 30.0% | |
ATCTGCATTTATAACACCAA+AGG | - | tig0026928:46580-46599 | None:intergenic | 30.0% | |
GTAGAAATGCACAAAGAAAT+TGG | - | tig0026928:46627-46646 | None:intergenic | 30.0% | |
AGTGAACATCACAATAAACT+GGG | - | tig0026928:46733-46752 | None:intergenic | 30.0% | |
! | ATAAGCATTGCATGAACATT+TGG | - | tig0026928:46778-46797 | None:intergenic | 30.0% |
! | TAACAATGATCTAAAACCTC+TGG | - | tig0026928:46814-46833 | None:intergenic | 30.0% |
CAGATAAATAATTGACCAGA+GGG | - | tig0026928:47028-47047 | None:intergenic | 30.0% | |
TCAGATAAATAATTGACCAG+AGG | - | tig0026928:47029-47048 | None:intergenic | 30.0% | |
!! | TGAGAGTTTTTCAATAGATC+CGG | + | tig0026928:47152-47171 | Msa1432060:intron | 30.0% |
!!! | AGAAATGCGTACGATTTTTT+AGG | + | tig0026928:47313-47332 | Msa1432060:intron | 30.0% |
!!! | GAAATGCGTACGATTTTTTA+GGG | + | tig0026928:47314-47333 | Msa1432060:intron | 30.0% |
CAAAACTGTGATTCAAATAG+CGG | + | tig0026928:47388-47407 | Msa1432060:intron | 30.0% | |
TTCAAATTCCAAACATTGCA+CGG | - | tig0026928:47580-47599 | None:intergenic | 30.0% | |
CATATCTCTTTCTCTTCAAT+GGG | - | tig0026928:47611-47630 | None:intergenic | 30.0% | |
CATTCGTTTACAACGTATAT+AGG | - | tig0026928:47743-47762 | None:intergenic | 30.0% | |
CTATATACGTTGTAAACGAA+TGG | + | tig0026928:47741-47760 | Msa1432060:intron | 30.0% | |
AAATTGTGAGGGATAAATTG+TGG | - | tig0026928:47862-47881 | None:intergenic | 30.0% | |
TAGTATATAAAGCCACATGA+AGG | - | tig0026928:47909-47928 | None:intergenic | 30.0% | |
ACTTTCATTGATGCATACTT+TGG | + | tig0026928:47934-47953 | Msa1432060:intron | 30.0% | |
! | GAGTGATAAACTTTAAAAGC+AGG | - | tig0026928:48654-48673 | None:intergenic | 30.0% |
TTGACCTATTACTGAATTAC+AGG | + | tig0026928:48835-48854 | Msa1432060:CDS | 30.0% | |
CTTACCTGTAATTCAGTAAT+AGG | - | tig0026928:48842-48861 | None:intergenic | 30.0% | |
ACAGAAGGAAAACAAAGTTA+AGG | - | tig0026928:49082-49101 | None:intergenic | 30.0% | |
ACATGGGAAAAATAAACAGA+AGG | - | tig0026928:49097-49116 | None:intergenic | 30.0% | |
AAATTGCGGAAAAACAACAT+GGG | - | tig0026928:49113-49132 | None:intergenic | 30.0% | |
TGCATTTAATCTAGGAAAGA+GGG | - | tig0026928:49295-49314 | None:intergenic | 30.0% | |
ATGCATTTAATCTAGGAAAG+AGG | - | tig0026928:49296-49315 | None:intergenic | 30.0% | |
TCTTTCCTAGATTAAATGCA+TGG | + | tig0026928:49295-49314 | Msa1432060:intron | 30.0% | |
AAGATATTGCGGCTAATAAT+GGG | + | tig0026928:49333-49352 | Msa1432060:CDS | 30.0% | |
!! | AAACTTGGGTATGTTTTTGA+AGG | + | tig0026928:49618-49637 | Msa1432060:intron | 30.0% |
TAGTAATAGAAAAAATGGGG+AGG | - | tig0026928:49714-49733 | None:intergenic | 30.0% | |
TGAGATTTATAGAGAATAGC+TGG | + | tig0026928:49750-49769 | Msa1432060:intron | 30.0% | |
TTACAAATAAAGATGGGTCT+TGG | + | tig0026928:49867-49886 | Msa1432060:intron | 30.0% | |
CCTCATAAATTTAGTAGTAC+GGG | + | tig0026928:49901-49920 | Msa1432060:intron | 30.0% | |
AAAGGATATGCTCATTGTAT+TGG | - | tig0026928:50081-50100 | None:intergenic | 30.0% | |
!!! | CGATTCCAGTTTTAATTCAA+TGG | - | tig0026928:50203-50222 | None:intergenic | 30.0% |
!! | AAAAGTGTAAAGTACTGTGA+TGG | + | tig0026928:50442-50461 | Msa1432060:CDS | 30.0% |
! | GTTTTCATGAGATTATACAG+GGG | - | tig0026928:50488-50507 | None:intergenic | 30.0% |
GGCATCAATATGATGAAAAT+AGG | - | tig0026928:50517-50536 | None:intergenic | 30.0% | |
CTCCTTCGAAAATTAAAAAC+AGG | + | tig0026928:50570-50589 | Msa1432060:three_prime_UTR | 30.0% | |
! | TCACTTTATCCCGATTTTCT+CGG | + | tig0026928:41773-41792 | Msa1432060:five_prime_UTR | 35.0% |
AGATTGAATTCGACGAAAAG+CGG | - | tig0026928:41823-41842 | None:intergenic | 35.0% | |
!! | TGCTTGTTGTAATTCCTGAA+TGG | + | tig0026928:42015-42034 | Msa1432060:exon | 35.0% |
TAGAAACACCGTTTCGAATT+CGG | - | tig0026928:42081-42100 | None:intergenic | 35.0% | |
! | ATTCGAAACGGTGTTTCTAT+TGG | + | tig0026928:42082-42101 | Msa1432060:CDS | 35.0% |
GAAAAACACCTTCAGAACTT+AGG | + | tig0026928:42110-42129 | Msa1432060:CDS | 35.0% | |
!!! | CTGCATTTTAACTTAGGGTT+AGG | + | tig0026928:42158-42177 | Msa1432060:intron | 35.0% |
TCTTCAATTGAAATGTGACG+CGG | + | tig0026928:42200-42219 | Msa1432060:intron | 35.0% | |
! | TTCGATGTTTTATACTGGCA+GGG | + | tig0026928:42235-42254 | Msa1432060:intron | 35.0% |
ACTGGATTGAGAACATTCAT+CGG | - | tig0026928:42296-42315 | None:intergenic | 35.0% | |
TTATATTTGCAGTGTCTCTG+AGG | + | tig0026928:42399-42418 | Msa1432060:intron | 35.0% | |
GACAATAGGTTTAAGAAACC+AGG | + | tig0026928:42424-42443 | Msa1432060:CDS | 35.0% | |
AGTCGTGTATCATTGTATCT+AGG | - | tig0026928:42463-42482 | None:intergenic | 35.0% | |
! | AATCTTAAACCTCGGCTTTT+TGG | - | tig0026928:42503-42522 | None:intergenic | 35.0% |
TGTTCAGGAAAATCCATCTA+TGG | + | tig0026928:42649-42668 | Msa1432060:intron | 35.0% | |
!! | TTACTAGTTTGCTCCATAGA+TGG | - | tig0026928:42665-42684 | None:intergenic | 35.0% |
!!! | TTCCATTTTTTCTACTTCGG+TGG | + | tig0026928:42697-42716 | Msa1432060:CDS | 35.0% |
AACCACCGAAGTAGAAAAAA+TGG | - | tig0026928:42702-42721 | None:intergenic | 35.0% | |
TTGTGATCAAGCAAACAAGT+AGG | - | tig0026928:42761-42780 | None:intergenic | 35.0% | |
ACAAATGAAAAATGCAGCGA+AGG | + | tig0026928:42881-42900 | Msa1432060:CDS | 35.0% | |
ATCAACAGCTGAAGAAAGAT+CGG | - | tig0026928:42924-42943 | None:intergenic | 35.0% | |
TGGAGCAGTAAATATTGACA+TGG | + | tig0026928:42952-42971 | Msa1432060:CDS | 35.0% | |
!!! | TTTTAGGGAAAAGCATTGAG+AGG | + | tig0026928:43072-43091 | Msa1432060:intron | 35.0% |
GAAGAATTTACTGCAATGGT+TGG | - | tig0026928:43171-43190 | None:intergenic | 35.0% | |
AGAGGAAGAATTTACTGCAA+TGG | - | tig0026928:43175-43194 | None:intergenic | 35.0% | |
TAATATATTGGCATCAAGCC+CGG | + | tig0026928:43300-43319 | Msa1432060:intron | 35.0% | |
AGCTCGCAAAAAATTTATGC+AGG | + | tig0026928:43332-43351 | Msa1432060:intron | 35.0% | |
GCTCGCAAAAAATTTATGCA+GGG | + | tig0026928:43333-43352 | Msa1432060:intron | 35.0% | |
CTCGCAAAAAATTTATGCAG+GGG | + | tig0026928:43334-43353 | Msa1432060:intron | 35.0% | |
AACAAGTACAACGTTTGGTA+AGG | - | tig0026928:44184-44203 | None:intergenic | 35.0% | |
TGTGTAACAAGTACAACGTT+TGG | - | tig0026928:44189-44208 | None:intergenic | 35.0% | |
GATAATACAAACAAGGGGAT+GGG | - | tig0026928:44286-44305 | None:intergenic | 35.0% | |
TGATAATACAAACAAGGGGA+TGG | - | tig0026928:44287-44306 | None:intergenic | 35.0% | |
AACACAAAAGCCATTGTGTT+GGG | + | tig0026928:44327-44346 | Msa1432060:intron | 35.0% | |
!! | TTTTCAGCATTGAATGAGTG+CGG | + | tig0026928:44520-44539 | Msa1432060:intron | 35.0% |
! | ATATGCATTGACACACAAAC+AGG | + | tig0026928:44652-44671 | Msa1432060:intron | 35.0% |
TGAAAATATGAGAAGTTCCC+AGG | + | tig0026928:44900-44919 | Msa1432060:intron | 35.0% | |
GAAAATATGAGAAGTTCCCA+GGG | + | tig0026928:44901-44920 | Msa1432060:intron | 35.0% | |
! | GCTTCAAAGTTTTGCATTCA+TGG | + | tig0026928:44923-44942 | Msa1432060:CDS | 35.0% |
AACACTGATATGATAGAAGG+CGG | - | tig0026928:44970-44989 | None:intergenic | 35.0% | |
CTCAACACTGATATGATAGA+AGG | - | tig0026928:44973-44992 | None:intergenic | 35.0% | |
CATGTAATAGAGGTCATGAA+AGG | - | tig0026928:45158-45177 | None:intergenic | 35.0% | |
ATGACCTCTATTACATGCTT+CGG | + | tig0026928:45161-45180 | Msa1432060:CDS | 35.0% | |
! | AACATATGTGGCCTCTTTTA+TGG | + | tig0026928:45187-45206 | Msa1432060:CDS | 35.0% |
!!! | TCCGTTACTTTTTTGTCAGA+TGG | + | tig0026928:45222-45241 | Msa1432060:intron | 35.0% |
GTTTGACTAATAAATTGGGG+TGG | - | tig0026928:45386-45405 | None:intergenic | 35.0% | |
! | CTTTTCCTGACATCTTTTAG+TGG | - | tig0026928:45459-45478 | None:intergenic | 35.0% |
CTCCCATCTTTCATTAATGA+AGG | - | tig0026928:45590-45609 | None:intergenic | 35.0% | |
GCAACTCTATAACTAGTCAT+TGG | - | tig0026928:45654-45673 | None:intergenic | 35.0% | |
TTACTGTACTTCGATTGTCA+CGG | - | tig0026928:45703-45722 | None:intergenic | 35.0% | |
AGTAACCAAGCATATGAAAC+TGG | + | tig0026928:45718-45737 | Msa1432060:intron | 35.0% | |
TATGTCCAGTTTCATATGCT+TGG | - | tig0026928:45726-45745 | None:intergenic | 35.0% | |
TTACAAGTGCACAAATACAC+AGG | - | tig0026928:45980-45999 | None:intergenic | 35.0% | |
GCCTTATCTGTATATAGGAT+TGG | + | tig0026928:46008-46027 | Msa1432060:intron | 35.0% | |
CTCCCTGTTTGATATTCTTT+AGG | - | tig0026928:46193-46212 | None:intergenic | 35.0% | |
AATTATTAACACAAGGCAGG+GGG | - | tig0026928:46235-46254 | None:intergenic | 35.0% | |
ACTAAACTTATAAATCGGGG+AGG | + | tig0026928:46483-46502 | Msa1432060:intron | 35.0% | |
GAAATGCACAAAGAAATTGG+TGG | - | tig0026928:46624-46643 | None:intergenic | 35.0% | |
CAGTGAACATCACAATAAAC+TGG | - | tig0026928:46734-46753 | None:intergenic | 35.0% | |
CAGTTTATTGTGATGTTCAC+TGG | + | tig0026928:46732-46751 | Msa1432060:CDS | 35.0% | |
TTTATTGTGATGTTCACTGG+TGG | + | tig0026928:46735-46754 | Msa1432060:CDS | 35.0% | |
TATATTTCTCAGTCAACCAG+AGG | + | tig0026928:46795-46814 | Msa1432060:CDS | 35.0% | |
TTCTATGAAAATACTCCCTC+TGG | + | tig0026928:47010-47029 | Msa1432060:intron | 35.0% | |
AAATTGATGAGCATGCATCT+AGG | - | tig0026928:47133-47152 | None:intergenic | 35.0% | |
TAGTGGTTACAGAATCACTT+AGG | - | tig0026928:47441-47460 | None:intergenic | 35.0% | |
! | AACGCAGACAAAGATTTTAG+TGG | - | tig0026928:47458-47477 | None:intergenic | 35.0% |
ACTAAAATCTTTGTCTGCGT+TGG | + | tig0026928:47457-47476 | Msa1432060:intron | 35.0% | |
CTAAAATCTTTGTCTGCGTT+GGG | + | tig0026928:47458-47477 | Msa1432060:intron | 35.0% | |
TAAAATCTTTGTCTGCGTTG+GGG | + | tig0026928:47459-47478 | Msa1432060:intron | 35.0% | |
ATTTCCACAATTAGAGTCGT+TGG | + | tig0026928:47517-47536 | Msa1432060:intron | 35.0% | |
GATACTATAGTGATGAGATC+CGG | + | tig0026928:47542-47561 | Msa1432060:intron | 35.0% | |
ATACTATAGTGATGAGATCC+GGG | + | tig0026928:47543-47562 | Msa1432060:intron | 35.0% | |
! | GCAATGTTTGGAATTTGAAG+AGG | + | tig0026928:47581-47600 | Msa1432060:intron | 35.0% |
CCATATCTCTTTCTCTTCAA+TGG | - | tig0026928:47612-47631 | None:intergenic | 35.0% | |
CCATTGAAGAGAAAGAGATA+TGG | + | tig0026928:47609-47628 | Msa1432060:intron | 35.0% | |
!! | CACAAAAAACTGGTCTTCTT+TGG | - | tig0026928:47675-47694 | None:intergenic | 35.0% |
!!! | CAAAGAAGACCAGTTTTTTG+TGG | + | tig0026928:47673-47692 | Msa1432060:intron | 35.0% |
CAAATTTGAGTACCTTCATG+TGG | + | tig0026928:47894-47913 | Msa1432060:intron | 35.0% | |
ATTGATGCATACTTTGGTGA+GGG | + | tig0026928:47940-47959 | Msa1432060:intron | 35.0% | |
AACAAAGATCCTAGACAAGA+GGG | - | tig0026928:47991-48010 | None:intergenic | 35.0% | |
AAACAAAGATCCTAGACAAG+AGG | - | tig0026928:47992-48011 | None:intergenic | 35.0% | |
!!! | TAACTTGCTCCTCTTTTGAA+CGG | - | tig0026928:48030-48049 | None:intergenic | 35.0% |
AGAGATAGAGAAGCAAAACT+TGG | + | tig0026928:48075-48094 | Msa1432060:intron | 35.0% | |
GAGATAGAGAAGCAAAACTT+GGG | + | tig0026928:48076-48095 | Msa1432060:intron | 35.0% | |
AGATAGAGAAGCAAAACTTG+GGG | + | tig0026928:48077-48096 | Msa1432060:intron | 35.0% | |
TTAATCCCTGTCAATGATCA+TGG | + | tig0026928:48224-48243 | Msa1432060:intron | 35.0% | |
AGAGGTAAGCACAAAAAGTT+GGG | - | tig0026928:48259-48278 | None:intergenic | 35.0% | |
AAGAGGTAAGCACAAAAAGT+TGG | - | tig0026928:48260-48279 | None:intergenic | 35.0% | |
! | ATGGTGTAAGCACATTTTAC+AGG | - | tig0026928:48386-48405 | None:intergenic | 35.0% |
TGAAAACCAGCAATGATTCT+GGG | - | tig0026928:48788-48807 | None:intergenic | 35.0% | |
ATGAAGTACGAAAACTGGAT+AGG | - | tig0026928:48873-48892 | None:intergenic | 35.0% | |
AGTCAATGAAGTACGAAAAC+TGG | - | tig0026928:48878-48897 | None:intergenic | 35.0% | |
CAAATTGCGGAAAAACAACA+TGG | - | tig0026928:49114-49133 | None:intergenic | 35.0% | |
! | TAATCCTTTTATCCACTGCT+TGG | + | tig0026928:49144-49163 | Msa1432060:intron | 35.0% |
! | AATCCTTTTATCCACTGCTT+GGG | + | tig0026928:49145-49164 | Msa1432060:intron | 35.0% |
TAATTCTAATTCCCAAGCAG+TGG | - | tig0026928:49159-49178 | None:intergenic | 35.0% | |
GCTTTACAGTTTACACAAAC+AGG | - | tig0026928:49188-49207 | None:intergenic | 35.0% | |
ATTTAATCTAGGAAAGAGGG+GGG | - | tig0026928:49292-49311 | None:intergenic | 35.0% | |
CATTTAATCTAGGAAAGAGG+GGG | - | tig0026928:49293-49312 | None:intergenic | 35.0% | |
GCATTTAATCTAGGAAAGAG+GGG | - | tig0026928:49294-49313 | None:intergenic | 35.0% | |
CATCTCCATGCATTTAATCT+AGG | - | tig0026928:49303-49322 | None:intergenic | 35.0% | |
GAAGATATTGCGGCTAATAA+TGG | + | tig0026928:49332-49351 | Msa1432060:CDS | 35.0% | |
AAAGATAACGAGTTTGCACA+AGG | + | tig0026928:49365-49384 | Msa1432060:CDS | 35.0% | |
TTTGCACAAGGATCATTAGA+TGG | + | tig0026928:49377-49396 | Msa1432060:CDS | 35.0% | |
AGGATACATTTATTCCACCT+TGG | + | tig0026928:49423-49442 | Msa1432060:CDS | 35.0% | |
ATGTAAATCAGAATGGATCC+CGG | - | tig0026928:49790-49809 | None:intergenic | 35.0% | |
GATCCATTCTGATTTACATG+AGG | + | tig0026928:49791-49810 | Msa1432060:intron | 35.0% | |
TAGACTACCAAAAGAGAGTT+AGG | + | tig0026928:49831-49850 | Msa1432060:intron | 35.0% | |
! | ACTTACACCTAACTCTCTTT+TGG | - | tig0026928:49841-49860 | None:intergenic | 35.0% |
CCCGTACTACTAAATTTATG+AGG | - | tig0026928:49904-49923 | None:intergenic | 35.0% | |
AGTAGAATTTCATGAGCTTC+TGG | + | tig0026928:50158-50177 | Msa1432060:intron | 35.0% | |
AGGTTTCAAATAACCAGGTA+AGG | - | tig0026928:50226-50245 | None:intergenic | 35.0% | |
AACTCAGGTTTCAAATAACC+AGG | - | tig0026928:50231-50250 | None:intergenic | 35.0% | |
AAATAAACCAAGCACAACTC+AGG | - | tig0026928:50246-50265 | None:intergenic | 35.0% | |
!! | TTACAGTTTTGTGACTGAAC+CGG | + | tig0026928:50273-50292 | Msa1432060:intron | 35.0% |
AAATCTGAATCAAAAGCTGC+TGG | + | tig0026928:50337-50356 | Msa1432060:CDS | 35.0% | |
! | AATTTTCGAAGGAGACCAAT+CGG | - | tig0026928:50564-50583 | None:intergenic | 35.0% |
ATGGGAAGAACCGAGAAAAT+CGG | - | tig0026928:41786-41805 | None:intergenic | 40.0% | |
! | TTTCGAATTCGGTGAGAACT+GGG | - | tig0026928:42070-42089 | None:intergenic | 40.0% |
AGTTCTCACCGAATTCGAAA+CGG | + | tig0026928:42070-42089 | Msa1432060:CDS | 40.0% | |
! | AAACGTACCCTAAGTTCTGA+AGG | - | tig0026928:42121-42140 | None:intergenic | 40.0% |
! | CTTCGATGTTTTATACTGGC+AGG | + | tig0026928:42234-42253 | Msa1432060:intron | 40.0% |
ATTGAGAACATTCATCGGTG+AGG | - | tig0026928:42291-42310 | None:intergenic | 40.0% | |
GATGAATGTTCTCAATCCAG+TGG | + | tig0026928:42295-42314 | Msa1432060:CDS | 40.0% | |
AACTAACTTTGCTGAACCAC+TGG | - | tig0026928:42314-42333 | None:intergenic | 40.0% | |
!! | TGATGCTTTTGTTTGCAGCT+TGG | + | tig0026928:42802-42821 | Msa1432060:intron | 40.0% |
! | TCAGCTGTTGATAGATCTTC+TGG | + | tig0026928:42932-42951 | Msa1432060:CDS | 40.0% |
TCCTCTGAATGTCATATACC+TGG | + | tig0026928:43189-43208 | Msa1432060:CDS | 40.0% | |
ATGTCATATACCTGGCAAGA+AGG | + | tig0026928:43197-43216 | Msa1432060:CDS | 40.0% | |
TAGGTGTATCTTATTCCTGC+CGG | - | tig0026928:44019-44038 | None:intergenic | 40.0% | |
GAACACAAAAGCCATTGTGT+TGG | + | tig0026928:44326-44345 | Msa1432060:intron | 40.0% | |
TGACACACAAACAGGAAACT+AGG | + | tig0026928:44660-44679 | Msa1432060:intron | 40.0% | |
!! | ATGCAAAACTTTGAAGCCCT+GGG | - | tig0026928:44920-44939 | None:intergenic | 40.0% |
!! | AATGCAAAACTTTGAAGCCC+TGG | - | tig0026928:44921-44940 | None:intergenic | 40.0% |
TCTTCCGAAGCATGTAATAG+AGG | - | tig0026928:45168-45187 | None:intergenic | 40.0% | |
ATGCTTCGGAAGAACATATG+TGG | + | tig0026928:45175-45194 | Msa1432060:CDS | 40.0% | |
TCATTGGATACAAGGGTGAA+GGG | - | tig0026928:45638-45657 | None:intergenic | 40.0% | |
CGGGAATGAAGAATTCTGAA+GGG | - | tig0026928:45683-45702 | None:intergenic | 40.0% | |
ACGGGAATGAAGAATTCTGA+AGG | - | tig0026928:45684-45703 | None:intergenic | 40.0% | |
TACTGTACTTCGATTGTCAC+GGG | - | tig0026928:45702-45721 | None:intergenic | 40.0% | |
AATGTCAGCACATTGATCAG+TGG | - | tig0026928:45809-45828 | None:intergenic | 40.0% | |
CTTTGAGCTGCATATCACAA+GGG | - | tig0026928:45861-45880 | None:intergenic | 40.0% | |
TCTAGCAATTTCAGCCACAA+AGG | - | tig0026928:45939-45958 | None:intergenic | 40.0% | |
! | GTGCAGCCTTATCTGTATAT+AGG | + | tig0026928:46003-46022 | Msa1432060:intron | 40.0% |
! | GCTATCAACGTTTTACAGAC+AGG | - | tig0026928:46104-46123 | None:intergenic | 40.0% |
! | AGAAGTGTAGAGAGAGAGTT+TGG | - | tig0026928:46159-46178 | None:intergenic | 40.0% |
GCTAAATCTTCATGTGCCTT+TGG | + | tig0026928:46561-46580 | Msa1432060:intron | 40.0% | |
GATGCTGCTCATTGGAAAAA+AGG | - | tig0026928:47108-47127 | None:intergenic | 40.0% | |
! | CAACAAGGGATGTACTTTTC+TGG | + | tig0026928:47180-47199 | Msa1432060:intron | 40.0% |
!!! | ATCACAGTTTTGACTCTCGT+TGG | - | tig0026928:47380-47399 | None:intergenic | 40.0% |
AAAATCTTTGTCTGCGTTGG+GGG | + | tig0026928:47460-47479 | Msa1432060:intron | 40.0% | |
TCAACCAACGACTCTAATTG+TGG | - | tig0026928:47524-47543 | None:intergenic | 40.0% | |
CATTGATGCATACTTTGGTG+AGG | + | tig0026928:47939-47958 | Msa1432060:intron | 40.0% | |
! | GAGGGTCTCTGAACTTATTT+TGG | + | tig0026928:47958-47977 | Msa1432060:intron | 40.0% |
GCAAGTTACAACTGAGGATT+TGG | + | tig0026928:48042-48061 | Msa1432060:CDS | 40.0% | |
GTTCTCCATGATCATTGACA+GGG | - | tig0026928:48232-48251 | None:intergenic | 40.0% | |
TGTTCTCCATGATCATTGAC+AGG | - | tig0026928:48233-48252 | None:intergenic | 40.0% | |
CTAATTAGGAGACAACAGAG+AGG | - | tig0026928:48325-48344 | None:intergenic | 40.0% | |
CATTTATTGTGCTGCAGTTG+TGG | + | tig0026928:48584-48603 | Msa1432060:intron | 40.0% | |
TAATAGCCCAGAATCATTGC+TGG | + | tig0026928:48779-48798 | Msa1432060:CDS | 40.0% | |
CTGAAAACCAGCAATGATTC+TGG | - | tig0026928:48789-48808 | None:intergenic | 40.0% | |
!!! | GAATCATTGCTGGTTTTCAG+TGG | + | tig0026928:48789-48808 | Msa1432060:CDS | 40.0% |
GATAAGTCAGAGCAGAACTT+TGG | - | tig0026928:49034-49053 | None:intergenic | 40.0% | |
ATTCCCAAGCAGTGGATAAA+AGG | - | tig0026928:49151-49170 | None:intergenic | 40.0% | |
GAGAAGAGCTGAAGATATTG+CGG | + | tig0026928:49322-49341 | Msa1432060:CDS | 40.0% | |
!! | CGGCTAATAATGGGTCTATT+TGG | + | tig0026928:49342-49361 | Msa1432060:CDS | 40.0% |
CATATACGGCTGATAATCCA+AGG | - | tig0026928:49443-49462 | None:intergenic | 40.0% | |
! | AGCCGTATATGTGCATTGAT+GGG | + | tig0026928:49452-49471 | Msa1432060:CDS | 40.0% |
AGCCCATCAATGCACATATA+CGG | - | tig0026928:49457-49476 | None:intergenic | 40.0% | |
GCTGGAATCCATTTAATAGC+CGG | + | tig0026928:49768-49787 | Msa1432060:intron | 40.0% | |
CTGGAATCCATTTAATAGCC+GGG | + | tig0026928:49769-49788 | Msa1432060:intron | 40.0% | |
AATGGATCCCGGCTATTAAA+TGG | - | tig0026928:49779-49798 | None:intergenic | 40.0% | |
CTGCCTCATGTAAATCAGAA+TGG | - | tig0026928:49797-49816 | None:intergenic | 40.0% | |
GAAACACAAGCACAGACAAT+GGG | - | tig0026928:50044-50063 | None:intergenic | 40.0% | |
AGAAACACAAGCACAGACAA+TGG | - | tig0026928:50045-50064 | None:intergenic | 40.0% | |
GCACGCCATTGAATTAAAAC+TGG | + | tig0026928:50195-50214 | Msa1432060:intron | 40.0% | |
! | TTTGAAACCTGAGTTGTGCT+TGG | + | tig0026928:50236-50255 | Msa1432060:intron | 40.0% |
TAAATGCTTACCCTTCCGAT+TGG | + | tig0026928:50546-50565 | Msa1432060:three_prime_UTR | 40.0% | |
! | GCAACACGCTCTTACAATTT+TGG | - | tig0026928:50610-50629 | None:intergenic | 40.0% |
TGGGAAGAACCGAGAAAATC+GGG | - | tig0026928:41785-41804 | None:intergenic | 45.0% | |
ATTCAATCTCCCGCTACGTT+AGG | + | tig0026928:41834-41853 | Msa1432060:five_prime_UTR | 45.0% | |
TTCAATCTCCCGCTACGTTA+GGG | + | tig0026928:41835-41854 | Msa1432060:five_prime_UTR | 45.0% | |
TTGAGTGTACCCTAACGTAG+CGG | - | tig0026928:41847-41866 | None:intergenic | 45.0% | |
! | AGTAGCTACTTTCGCCATTC+AGG | - | tig0026928:42032-42051 | None:intergenic | 45.0% |
! | GTTTCGAATTCGGTGAGAAC+TGG | - | tig0026928:42071-42090 | None:intergenic | 45.0% |
!! | ATTGAAGCGAGAAAGTGTCG+TGG | + | tig0026928:42264-42283 | Msa1432060:CDS | 45.0% |
! | TATTTGCAGTGTCTCTGAGG+TGG | + | tig0026928:42402-42421 | Msa1432060:intron | 45.0% |
TATTTGCCACCAAAAAGCCG+AGG | + | tig0026928:42491-42510 | Msa1432060:CDS | 45.0% | |
! | CTTAAACCTCGGCTTTTTGG+TGG | - | tig0026928:42500-42519 | None:intergenic | 45.0% |
! | GCCGAGGTTTAAGATTCCAT+CGG | + | tig0026928:42507-42526 | Msa1432060:CDS | 45.0% |
CCCGATGGAATCTTAAACCT+CGG | - | tig0026928:42511-42530 | None:intergenic | 45.0% | |
! | CCGAGGTTTAAGATTCCATC+GGG | + | tig0026928:42508-42527 | Msa1432060:CDS | 45.0% |
! | CGAGGTTTAAGATTCCATCG+GGG | + | tig0026928:42509-42528 | Msa1432060:CDS | 45.0% |
! | GTTTAAGATTCCATCGGGGA+AGG | + | tig0026928:42513-42532 | Msa1432060:CDS | 45.0% |
! | TTCACATTTTCCTTCCCCGA+TGG | - | tig0026928:42526-42545 | None:intergenic | 45.0% |
ATCGGGGAAGGAAAATGTGA+AGG | + | tig0026928:42525-42544 | Msa1432060:CDS | 45.0% | |
TTGGAGAAATCTGCTACCTC+AGG | + | tig0026928:42821-42840 | Msa1432060:CDS | 45.0% | |
GCTAATCCATTATCACCACG+CGG | - | tig0026928:43114-43133 | None:intergenic | 45.0% | |
!! | TTAGCTACCGATTCATCCGA+TGG | + | tig0026928:43129-43148 | Msa1432060:CDS | 45.0% |
GCCAGGTATATGACATTCAG+AGG | - | tig0026928:43193-43212 | None:intergenic | 45.0% | |
AGGGGATACTATTCGCATAC+TGG | - | tig0026928:43247-43266 | None:intergenic | 45.0% | |
TTACCAATTCGCAGAAGCAG+GGG | - | tig0026928:43265-43284 | None:intergenic | 45.0% | |
CTTACCAATTCGCAGAAGCA+GGG | - | tig0026928:43266-43285 | None:intergenic | 45.0% | |
ACTTACCAATTCGCAGAAGC+AGG | - | tig0026928:43267-43286 | None:intergenic | 45.0% | |
AGGTGTATCTTATTCCTGCC+GGG | - | tig0026928:44018-44037 | None:intergenic | 45.0% | |
ACGTTTGGTAAGGTCTTCGT+GGG | - | tig0026928:44174-44193 | None:intergenic | 45.0% | |
AACGTTTGGTAAGGTCTTCG+TGG | - | tig0026928:44175-44194 | None:intergenic | 45.0% | |
CATCTTACAGCCCAACACAA+TGG | - | tig0026928:44340-44359 | None:intergenic | 45.0% | |
AGAAGGCGGAAGAACAGATT+GGG | - | tig0026928:44956-44975 | None:intergenic | 45.0% | |
TAGAAGGCGGAAGAACAGAT+TGG | - | tig0026928:44957-44976 | None:intergenic | 45.0% | |
TTGAGCTCATCAACTGCAGA+AGG | + | tig0026928:44988-45007 | Msa1432060:CDS | 45.0% | |
GTTCTTAAGGAAACGGCAAG+TGG | + | tig0026928:45120-45139 | Msa1432060:CDS | 45.0% | |
AGGGAGTTCAGCTGTTATAC+TGG | - | tig0026928:45619-45638 | None:intergenic | 45.0% | |
GTCATTGGATACAAGGGTGA+AGG | - | tig0026928:45639-45658 | None:intergenic | 45.0% | |
CCTTTGAGCTGCATATCACA+AGG | - | tig0026928:45862-45881 | None:intergenic | 45.0% | |
CCTTGTGATATGCAGCTCAA+AGG | + | tig0026928:45859-45878 | Msa1432060:intron | 45.0% | |
CATACAAGTACAGAGCGAGT+AGG | + | tig0026928:46911-46930 | Msa1432060:intron | 45.0% | |
! | TTTCTGGTAATGCTTGCCTC+AGG | + | tig0026928:46957-46976 | Msa1432060:intron | 45.0% |
! | TCTAGGATGATGCTGCTCAT+TGG | - | tig0026928:47116-47135 | None:intergenic | 45.0% |
ATAGATCCGGCTGTTCAACA+AGG | + | tig0026928:47165-47184 | Msa1432060:intron | 45.0% | |
TAGATCCGGCTGTTCAACAA+GGG | + | tig0026928:47166-47185 | Msa1432060:intron | 45.0% | |
TACATCCCTTGTTGAACAGC+CGG | - | tig0026928:47174-47193 | None:intergenic | 45.0% | |
!!! | GGGATGTACTTTTCTGGAGT+TGG | + | tig0026928:47186-47205 | Msa1432060:intron | 45.0% |
TCTTTAGTGTTGCGCCTGTT+GGG | + | tig0026928:47278-47297 | Msa1432060:intron | 45.0% | |
CTAGCTGTTATTGACCCAAC+AGG | - | tig0026928:47295-47314 | None:intergenic | 45.0% | |
TTGACTCTCGTTGGCAGAAA+GGG | - | tig0026928:47371-47390 | None:intergenic | 45.0% | |
TTTGACTCTCGTTGGCAGAA+AGG | - | tig0026928:47372-47391 | None:intergenic | 45.0% | |
! | TCCTCTTTTGAACGGCAAAG+AGG | - | tig0026928:48022-48041 | None:intergenic | 45.0% |
AGAGGAGCAAGTTACAACTG+AGG | + | tig0026928:48036-48055 | Msa1432060:CDS | 45.0% | |
ATTAGCTGACGCCACTTAGT+GGG | + | tig0026928:48149-48168 | Msa1432060:intron | 45.0% | |
! | CATTTGGAACAATGCAGACC+CGG | + | tig0026928:48730-48749 | Msa1432060:intron | 45.0% |
! | GTCAGAGCAGAACTTTGGAA+CGG | - | tig0026928:49029-49048 | None:intergenic | 45.0% |
TGTCAGCTGTCACATACATC+AGG | - | tig0026928:49056-49075 | None:intergenic | 45.0% | |
ATACGGCTGATAATCCAAGG+TGG | - | tig0026928:49440-49459 | None:intergenic | 45.0% | |
CAGCCGTATATGTGCATTGA+TGG | + | tig0026928:49451-49470 | Msa1432060:CDS | 45.0% | |
CGTTATCAGAGCTCAACACA+TGG | - | tig0026928:49574-49593 | None:intergenic | 45.0% | |
! | TGTGTTGAGCTCTGATAACG+AGG | + | tig0026928:49574-49593 | Msa1432060:intron | 45.0% |
! | ACAAGCACAGACAATGGGTT+GGG | - | tig0026928:50039-50058 | None:intergenic | 45.0% |
! | CAATGAAGTGTCACTGCGAA+AGG | - | tig0026928:50099-50118 | None:intergenic | 45.0% |
GCAACTCAAGACTAATCAGC+AGG | - | tig0026928:50128-50147 | None:intergenic | 45.0% | |
AAAACTGGAATCGCCTTACC+TGG | + | tig0026928:50210-50229 | Msa1432060:intron | 45.0% | |
CAAAGCAACATTCAGTCCAC+TGG | - | tig0026928:50302-50321 | None:intergenic | 45.0% | |
!!! | TAATTTAAAATGAAAATAAT+TGG | - | tig0026928:41691-41710 | None:intergenic | 5.0% |
!!! | TTTTTATTTTATTTGTTTTT+TGG | + | tig0026928:41719-41738 | Msa1432060:five_prime_UTR | 5.0% |
!! | AAAAAAACATATTAAATTTA+AGG | + | tig0026928:43385-43404 | Msa1432060:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTTTTC+TGG | + | tig0026928:46941-46960 | Msa1432060:intron | 5.0% |
!! | GCGGTGTCGTATCAGTGAAT+GGG | - | tig0026928:41804-41823 | None:intergenic | 50.0% |
!! | AGCGGTGTCGTATCAGTGAA+TGG | - | tig0026928:41805-41824 | None:intergenic | 50.0% |
TGAGTGTACCCTAACGTAGC+GGG | - | tig0026928:41846-41865 | None:intergenic | 50.0% | |
!! | GTGTCTCTGAGGTGGACAAT+AGG | + | tig0026928:42410-42429 | Msa1432060:intron | 50.0% |
CTAGGCGCCCTAAATAATCC+TGG | - | tig0026928:42445-42464 | None:intergenic | 50.0% | |
TCGGTGGTTAAGAGACAGCA+AGG | + | tig0026928:42713-42732 | Msa1432060:CDS | 50.0% | |
CGGTGGTTAAGAGACAGCAA+GGG | + | tig0026928:42714-42733 | Msa1432060:CDS | 50.0% | |
GGTGGTTAAGAGACAGCAAG+GGG | + | tig0026928:42715-42734 | Msa1432060:CDS | 50.0% | |
AGAGACAGCAAGGGGTTTCA+CGG | + | tig0026928:42723-42742 | Msa1432060:CDS | 50.0% | |
GAAATCTGCTACCTCAGGAG+AGG | + | tig0026928:42826-42845 | Msa1432060:CDS | 50.0% | |
TACCTCAGGAGAGGTTACCA+AGG | + | tig0026928:42835-42854 | Msa1432060:CDS | 50.0% | |
! | ATCCTTGGTAACCTCTCCTG+AGG | - | tig0026928:42840-42859 | None:intergenic | 50.0% |
TCAGGAGAGGTTACCAAGGA+TGG | + | tig0026928:42839-42858 | Msa1432060:CDS | 50.0% | |
TACCAAGGATGGTGTGTTGC+AGG | + | tig0026928:42850-42869 | Msa1432060:CDS | 50.0% | |
TCCACGTCCATCGGATGAAT+CGG | - | tig0026928:43139-43158 | None:intergenic | 50.0% | |
TGCTGAATCTCCACGTCCAT+CGG | - | tig0026928:43148-43167 | None:intergenic | 50.0% | |
TATCCCCTGCTTCTGCGAAT+TGG | + | tig0026928:43259-43278 | Msa1432060:intron | 50.0% | |
CAGTGCAGGTAGGTTAACTG+AGG | - | tig0026928:44868-44887 | None:intergenic | 50.0% | |
CATTCCTGTAAGGACAGTGC+AGG | - | tig0026928:44882-44901 | None:intergenic | 50.0% | |
GAAGGCGGAAGAACAGATTG+GGG | - | tig0026928:44955-44974 | None:intergenic | 50.0% | |
AGCTCATCAACTGCAGAAGG+AGG | + | tig0026928:44991-45010 | Msa1432060:CDS | 50.0% | |
TAAGGAAACGGCAAGTGGCT+TGG | + | tig0026928:45125-45144 | Msa1432060:CDS | 50.0% | |
AAGGAAACGGCAAGTGGCTT+GGG | + | tig0026928:45126-45145 | Msa1432060:CDS | 50.0% | |
! | GCAGCTCAAAGGTACAACTC+AGG | + | tig0026928:45870-45889 | Msa1432060:intron | 50.0% |
AGGGGGAGCTCTACTTCAAT+CGG | - | tig0026928:46218-46237 | None:intergenic | 50.0% | |
CCAGTGCAAGCACAACTCAA+GGG | - | tig0026928:46266-46285 | None:intergenic | 50.0% | |
ACCAGTGCAAGCACAACTCA+AGG | - | tig0026928:46267-46286 | None:intergenic | 50.0% | |
GTCTTTAGTGTTGCGCCTGT+TGG | + | tig0026928:47277-47296 | Msa1432060:intron | 50.0% | |
AGCAACAGCCGTGCAATGTT+TGG | + | tig0026928:47569-47588 | Msa1432060:intron | 50.0% | |
ATCTCTCTGCAGAACAGTGC+TGG | + | tig0026928:47643-47662 | Msa1432060:intron | 50.0% | |
TCTCTCTGCAGAACAGTGCT+GGG | + | tig0026928:47644-47663 | Msa1432060:intron | 50.0% | |
GGCTGTATACCCTCTTGTCT+AGG | + | tig0026928:47979-47998 | Msa1432060:intron | 50.0% | |
GCCTCTTTGCCGTTCAAAAG+AGG | + | tig0026928:48018-48037 | Msa1432060:CDS | 50.0% | |
AGAGAAGCAAAACTTGGGGC+AGG | + | tig0026928:48081-48100 | Msa1432060:intron | 50.0% | |
CATTAGCTGACGCCACTTAG+TGG | + | tig0026928:48148-48167 | Msa1432060:intron | 50.0% | |
TGACGCCACTTAGTGGGATA+AGG | + | tig0026928:48155-48174 | Msa1432060:intron | 50.0% | |
! | CCAAGCCTTATCCCACTAAG+TGG | - | tig0026928:48163-48182 | None:intergenic | 50.0% |
CCACTTAGTGGGATAAGGCT+TGG | + | tig0026928:48160-48179 | Msa1432060:intron | 50.0% | |
CTTAGTGGGATAAGGCTTGG+TGG | + | tig0026928:48163-48182 | Msa1432060:intron | 50.0% | |
AGTGGCAGCAACAATGTGCA+TGG | + | tig0026928:48807-48826 | Msa1432060:CDS | 50.0% | |
AACGTCCACACTAGACAGTG+AGG | - | tig0026928:48985-49004 | None:intergenic | 50.0% | |
GGAACAGGAGAACACAAGAC+AGG | - | tig0026928:49008-49027 | None:intergenic | 50.0% | |
!! | GCAGAACTTTGGAACGGAAC+AGG | - | tig0026928:49023-49042 | None:intergenic | 50.0% |
!! | TGTGCATTGATGGGCTCTGA+AGG | + | tig0026928:49461-49480 | Msa1432060:CDS | 50.0% |
!! | GTGCATTGATGGGCTCTGAA+GGG | + | tig0026928:49462-49481 | Msa1432060:CDS | 50.0% |
! | AGGTACGTGGAGCTTTTGCT+TGG | + | tig0026928:49500-49519 | Msa1432060:intron | 50.0% |
AATGGGGAGGATCCATTTCC+AGG | - | tig0026928:49701-49720 | None:intergenic | 50.0% | |
CACAAGCACAGACAATGGGT+TGG | - | tig0026928:50040-50059 | None:intergenic | 50.0% | |
ACATTCAGTCCACTGGAGAC+CGG | - | tig0026928:50295-50314 | None:intergenic | 50.0% | |
CGAGGCTGCAGTAATTCCTT+TGG | + | tig0026928:50373-50392 | Msa1432060:CDS | 50.0% | |
!! | TGCAGCTTCTGGAATGCCAA+AGG | - | tig0026928:50392-50411 | None:intergenic | 50.0% |
GAAGACGTAACTGCAGCTTC+TGG | - | tig0026928:50403-50422 | None:intergenic | 50.0% | |
TCGAAGGAGACCAATCGGAA+GGG | - | tig0026928:50559-50578 | None:intergenic | 50.0% | |
TTCGAAGGAGACCAATCGGA+AGG | - | tig0026928:50560-50579 | None:intergenic | 50.0% | |
! | GAACTGGGAGGCATAGCACT+TGG | - | tig0026928:42055-42074 | None:intergenic | 55.0% |
! | CGAATTCGGTGAGAACTGGG+AGG | - | tig0026928:42067-42086 | None:intergenic | 55.0% |
CAAGGATGGTGTGTTGCAGG+CGG | + | tig0026928:42853-42872 | Msa1432060:CDS | 55.0% | |
AAGGATGGTGTGTTGCAGGC+GGG | + | tig0026928:42854-42873 | Msa1432060:CDS | 55.0% | |
!! | TTGAGAGGACTAGCCTCGCT+TGG | + | tig0026928:43087-43106 | Msa1432060:CDS | 55.0% |
CTTGGACCGCGTGGTGATAA+TGG | + | tig0026928:43105-43124 | Msa1432060:CDS | 55.0% | |
! | ACCGATTCATCCGATGGACG+TGG | + | tig0026928:43135-43154 | Msa1432060:CDS | 55.0% |
ACCTGGCAAGAAGGCTCCTT+TGG | + | tig0026928:43206-43225 | Msa1432060:CDS | 55.0% | |
TCCAAAGGAGCCTTCTTGCC+AGG | - | tig0026928:43210-43229 | None:intergenic | 55.0% | |
TCATATGGGAGGGGTAGCCT+TGG | - | tig0026928:43977-43996 | None:intergenic | 55.0% | |
AGGCTACCCCTCCCATATGA+AGG | + | tig0026928:43977-43996 | Msa1432060:intron | 55.0% | |
GGCTACCCCTCCCATATGAA+GGG | + | tig0026928:43978-43997 | Msa1432060:intron | 55.0% | |
CGTAGCCCTTCATATGGGAG+GGG | - | tig0026928:43986-44005 | None:intergenic | 55.0% | |
GCGTAGCCCTTCATATGGGA+GGG | - | tig0026928:43987-44006 | None:intergenic | 55.0% | |
! | AGGGGCGTAGCCCTTCATAT+GGG | - | tig0026928:43991-44010 | None:intergenic | 55.0% |
TTATTCCTGCCGGGCTTCAG+GGG | - | tig0026928:44009-44028 | None:intergenic | 55.0% | |
CTTATTCCTGCCGGGCTTCA+GGG | - | tig0026928:44010-44029 | None:intergenic | 55.0% | |
TCTTATTCCTGCCGGGCTTC+AGG | - | tig0026928:44011-44030 | None:intergenic | 55.0% | |
CCTGTAAGGACAGTGCAGGT+AGG | - | tig0026928:44878-44897 | None:intergenic | 55.0% | |
CCTACCTGCACTGTCCTTAC+AGG | + | tig0026928:44875-44894 | Msa1432060:intron | 55.0% | |
! | ACAAAGGCGCAAACTCAGGG+TGG | - | tig0026928:45923-45942 | None:intergenic | 55.0% |
ACCCTGAGTTTGCGCCTTTG+TGG | + | tig0026928:45922-45941 | Msa1432060:intron | 55.0% | |
! | GCCACAAAGGCGCAAACTCA+GGG | - | tig0026928:45926-45945 | None:intergenic | 55.0% |
! | AGCCACAAAGGCGCAAACTC+AGG | - | tig0026928:45927-45946 | None:intergenic | 55.0% |
! | CCCTTGAGTTGTGCTTGCAC+TGG | + | tig0026928:46263-46282 | Msa1432060:intron | 55.0% |
! | GTGATGTTCACTGGTGGCGA+TGG | + | tig0026928:46741-46760 | Msa1432060:CDS | 55.0% |
ACTCTCGTTGGCAGAAAGGG+AGG | - | tig0026928:47368-47387 | None:intergenic | 55.0% | |
AGAGAATGACCTTGAGCGCC+GGG | - | tig0026928:48751-48770 | None:intergenic | 55.0% | |
CAGAGAATGACCTTGAGCGC+CGG | - | tig0026928:48752-48771 | None:intergenic | 55.0% | |
CGTGACCTCACTGTCTAGTG+TGG | + | tig0026928:48977-48996 | Msa1432060:CDS | 55.0% | |
!! | CATTGATGGGCTCTGAAGGG+AGG | + | tig0026928:49465-49484 | Msa1432060:CDS | 55.0% |
! | CTCTGAAGGGAGGAGCTTTG+AGG | + | tig0026928:49475-49494 | Msa1432060:CDS | 55.0% |
!! | AAGGGAGGAGCTTTGAGGCA+AGG | + | tig0026928:49480-49499 | Msa1432060:CDS | 55.0% |
!! | GAGCTTTGAGGCAAGGTACG+TGG | + | tig0026928:49487-49506 | Msa1432060:intron | 55.0% |
CGCCTGCAACACACCATCCT+TGG | - | tig0026928:42855-42874 | None:intergenic | 60.0% | |
ATTGGCATCAAGCCCGGCAG+CGG | + | tig0026928:43306-43325 | Msa1432060:intron | 60.0% | |
GGCGTAGCCCTTCATATGGG+AGG | - | tig0026928:43988-44007 | None:intergenic | 60.0% | |
! | CAGGGGCGTAGCCCTTCATA+TGG | - | tig0026928:43992-44011 | None:intergenic | 60.0% |
! | TTCACTGGTGGCGATGGCTC+TGG | + | tig0026928:46747-46766 | Msa1432060:CDS | 60.0% |
! | TGCACGGCTGTTGCTTCACC+CGG | - | tig0026928:47564-47583 | None:intergenic | 60.0% |
GTGACTGAACCGGTCTCCAG+TGG | + | tig0026928:50283-50302 | Msa1432060:CDS | 60.0% | |
GCTGGCAGTGAAAGCTTGCG+AGG | + | tig0026928:50355-50374 | Msa1432060:CDS | 60.0% | |
ATCACCACGCGGTCCAAGCG+AGG | - | tig0026928:43103-43122 | None:intergenic | 65.0% | |
TTTGCGAGCTTCGCCGCTGC+CGG | - | tig0026928:43322-43341 | None:intergenic | 65.0% | |
CAATGCAGACCCGGCGCTCA+AGG | + | tig0026928:48739-48758 | Msa1432060:intron | 65.0% | |
CTAGCCTCGCTTGGACCGCG+TGG | + | tig0026928:43096-43115 | Msa1432060:CDS | 70.0% | |
TTGCGAGCTTCGCCGCTGCC+GGG | - | tig0026928:43321-43340 | None:intergenic | 70.0% | |
AGGGCTACGCCCCTGAAGCC+CGG | + | tig0026928:43997-44016 | Msa1432060:intron | 70.0% | |
CTACGCCCCTGAAGCCCGGC+AGG | + | tig0026928:44001-44020 | Msa1432060:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0026928 | gene | 41681 | 50734 | 41681 | ID=Msa1432060;Name=Msa1432060 |
tig0026928 | mRNA | 41681 | 50734 | 41681 | ID=Msa1432060-mRNA-1;Parent=Msa1432060;Name=Msa1432060-mRNA-1;_AED=0.14;_eAED=0.14;_QI=228|0.85|0.8|1|0.78|0.66|15|239|570 |
tig0026928 | exon | 41681 | 41856 | 41681 | ID=Msa1432060-mRNA-1:exon:7834;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 41982 | 42132 | 41982 | ID=Msa1432060-mRNA-1:exon:7835;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 42256 | 42326 | 42256 | ID=Msa1432060-mRNA-1:exon:7836;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 42411 | 42546 | 42411 | ID=Msa1432060-mRNA-1:exon:7837;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 42656 | 42744 | 42656 | ID=Msa1432060-mRNA-1:exon:7838;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 42820 | 42973 | 42820 | ID=Msa1432060-mRNA-1:exon:7839;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 43078 | 43257 | 43078 | ID=Msa1432060-mRNA-1:exon:7840;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 44922 | 45012 | 44922 | ID=Msa1432060-mRNA-1:exon:7841;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 45113 | 45208 | 45113 | ID=Msa1432060-mRNA-1:exon:7842;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 46721 | 46842 | 46721 | ID=Msa1432060-mRNA-1:exon:7843;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 48001 | 48063 | 48001 | ID=Msa1432060-mRNA-1:exon:7844;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 48747 | 48856 | 48747 | ID=Msa1432060-mRNA-1:exon:7845;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 48971 | 49058 | 48971 | ID=Msa1432060-mRNA-1:exon:7846;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 49305 | 49501 | 49305 | ID=Msa1432060-mRNA-1:exon:7847;Parent=Msa1432060-mRNA-1 |
tig0026928 | exon | 50279 | 50734 | 50279 | ID=Msa1432060-mRNA-1:exon:7848;Parent=Msa1432060-mRNA-1 |
tig0026928 | five_prime_UTR | 41681 | 41856 | 41681 | ID=Msa1432060-mRNA-1:five_prime_utr;Parent=Msa1432060-mRNA-1 |
tig0026928 | five_prime_UTR | 41982 | 42033 | 41982 | ID=Msa1432060-mRNA-1:five_prime_utr;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 42034 | 42132 | 42034 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 42256 | 42326 | 42256 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 42411 | 42546 | 42411 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 42656 | 42744 | 42656 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 42820 | 42973 | 42820 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 43078 | 43257 | 43078 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 44922 | 45012 | 44922 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 45113 | 45208 | 45113 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 46721 | 46842 | 46721 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 48001 | 48063 | 48001 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 48747 | 48856 | 48747 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 48971 | 49058 | 48971 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 49305 | 49501 | 49305 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | CDS | 50279 | 50495 | 50279 | ID=Msa1432060-mRNA-1:cds;Parent=Msa1432060-mRNA-1 |
tig0026928 | three_prime_UTR | 50496 | 50734 | 50496 | ID=Msa1432060-mRNA-1:three_prime_utr;Parent=Msa1432060-mRNA-1 |
Gene Sequence |
Protein sequence |