AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0544410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544410 MtrunA17_Chr4g0025241 93.571 700 11 2 1 700 1 666 0.0 1324
Msa0544410 MtrunA17_Chr2g0322311 63.948 699 203 10 1 694 1 655 0.0 833
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544410 AT2G32590.1 56.073 708 258 12 1 693 1 670 0.0 702

Find 197 sgRNAs with CRISPR-Local

Find 371 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGTCTGCCTAGGTTTC+AGG 0.092734 4_1:+32846157 None:intergenic
TTGCAAGGCGGTCTGCTTTC+AGG 0.102056 4_1:+32846033 None:intergenic
CTGAAATATCAGGTTCATTT+TGG 0.156942 4_1:+32846981 None:intergenic
GATTAATTTAGTTTGATATT+TGG 0.180906 4_1:+32844037 None:intergenic
AGTATCTTTCAAGAATTTAT+TGG 0.201745 4_1:-32844969 Msa0544410:CDS
CCCATTTGTATCCTATAGTT+TGG 0.243068 4_1:-32844149 Msa0544410:three_prime_UTR
TCATCTTACTGATATTATTA+AGG 0.247167 4_1:-32849035 Msa0544410:CDS
TGTAACCTTGCTCAGCTTCT+TGG 0.257914 4_1:+32847746 None:intergenic
TGGGTTCTTATTCTTGAGTC+TGG 0.268269 4_1:-32846372 Msa0544410:CDS
CAAGCTCTTCCGCTGAATTC+TGG 0.278212 4_1:+32846720 None:intergenic
TTCAGGGAGAAGTAATGTTT+TGG 0.290998 4_1:+32846050 None:intergenic
ACCAATTCAAATTGCAAAAC+TGG 0.300603 4_1:-32849503 Msa0544410:five_prime_UTR
CCCACCAGCCCCTTCATCTT+AGG 0.303659 4_1:-32849356 Msa0544410:CDS
AAGTGCTAAAAGTTACTCTT+TGG 0.303784 4_1:-32845276 Msa0544410:CDS
CTTTGTCTGCCTAGGTTTCA+GGG 0.320733 4_1:+32846158 None:intergenic
ATGAATAATCTCGGTGTATA+TGG 0.321638 4_1:-32847058 Msa0544410:CDS
TGTTAAGCTTCCTCCTGTTC+AGG 0.321639 4_1:-32845236 Msa0544410:intron
TGTTCTTTCTTTAGTGTCTT+GGG 0.322608 4_1:-32845822 Msa0544410:intron
TGGCGAGCTTTATACAATTC+TGG 0.325986 4_1:+32849192 None:intergenic
TGTCAAGCTATTTCTGCTTC+CGG 0.326664 4_1:-32845968 Msa0544410:CDS
CGTCAAATTTCGCAGTTGTC+TGG 0.327918 4_1:+32847104 None:intergenic
GACTGGATGCGTGCGGCAAC+AGG 0.335269 4_1:+32849380 None:intergenic
ACTCATTAATTCTGCAGTTC+AGG 0.341845 4_1:-32844785 Msa0544410:exon
ATGTTCTTTCTTTAGTGTCT+TGG 0.342141 4_1:-32845823 Msa0544410:intron
AGAACGATCCATTCCCTTCT+TGG 0.343798 4_1:-32845623 Msa0544410:CDS
GAGGGTGTTAATGTTGAAAA+TGG 0.347394 4_1:-32847425 Msa0544410:CDS
TTCTTTAGTGTCTTGGGAGG+AGG 0.350205 4_1:-32845816 Msa0544410:intron
CACTTGAACATCAACCTGTT+TGG 0.351903 4_1:+32845294 None:intergenic
CAGGAAAGAGACAGATAAAA+AGG 0.352537 4_1:-32847390 Msa0544410:intron
CATCCAAGTTGGGGAAGCTT+TGG 0.353845 4_1:+32844840 None:intergenic
TTTCCGCCATTGGTAGGGTT+TGG 0.356708 4_1:+32849429 None:intergenic
TGGCTTTCCATACACTTTGC+AGG 0.360381 4_1:+32847001 None:intergenic
TGAAGGGGCTGGTGGGAGAC+TGG 0.361253 4_1:+32849363 None:intergenic
GGCAACAGGGAGACGGAGTT+TGG 0.363054 4_1:+32849394 None:intergenic
AGATTGTAACAAGTAGCTTT+TGG 0.374687 4_1:-32844263 Msa0544410:three_prime_UTR
GGCTGGTAGTGGCAGTCCTC+TGG 0.378165 4_1:+32846000 None:intergenic
CTTCATATGTCTACTGCATT+TGG 0.388124 4_1:-32844885 Msa0544410:CDS
TTTAGATTTCACAAATTCTC+TGG 0.397573 4_1:-32846112 Msa0544410:CDS
GTGCTTGAGCGCGTTCGAGC+TGG 0.401468 4_1:+32849321 None:intergenic
CATGGGCAGGCCCTGATCAT+TGG 0.402102 4_1:-32846328 Msa0544410:CDS
TCGCAGTTGTCTGGCGATAG+AGG 0.402631 4_1:+32847113 None:intergenic
TTATTCACTCAGGGTGGATT+CGG 0.402739 4_1:-32847815 Msa0544410:CDS
ATTATTCATTAAAAGACCTT+TGG 0.404876 4_1:+32847072 None:intergenic
TCACCACATTGAATGTGTTT+CGG 0.405140 4_1:+32846881 None:intergenic
CAACCAGTCATTGCTGATCT+AGG 0.406386 4_1:-32846617 Msa0544410:CDS
TCCAAACTATAGGATACAAA+TGG 0.411047 4_1:+32844148 None:intergenic
TCCCTCCACAGACTCTGATA+TGG 0.414277 4_1:-32846417 Msa0544410:CDS
CGACAAACCTGAGGATAACT+AGG 0.415999 4_1:+32846569 None:intergenic
GCGTCGAGAGATTGAGAAAC+CGG 0.422672 4_1:+32849260 None:intergenic
TGCAAGGCGGTCTGCTTTCA+GGG 0.424847 4_1:+32846034 None:intergenic
CTCAATGTAAAGAAGTTTGA+TGG 0.425467 4_1:-32847250 Msa0544410:intron
GGGTTCTTATTCTTGAGTCT+GGG 0.426834 4_1:-32846371 Msa0544410:CDS
AGTGCTAAAAGTTACTCTTT+GGG 0.428131 4_1:-32845275 Msa0544410:CDS
GACAGATTTGAAAATGTTGA+TGG 0.428226 4_1:-32846392 Msa0544410:CDS
CAATAATCAATCCAAACTAT+AGG 0.428843 4_1:+32844138 None:intergenic
TCAATGGTATCTGAAATATC+AGG 0.428943 4_1:+32846971 None:intergenic
GAACGATCCATTCCCTTCTT+GGG 0.430080 4_1:-32845622 Msa0544410:CDS
ATTGAAAGATCATCCAAGTT+GGG 0.430730 4_1:+32844830 None:intergenic
AGAAGTACCTGCAAAGTGTA+TGG 0.431967 4_1:-32847008 Msa0544410:CDS
CTGCATTTGGCAAATGAGAA+AGG 0.433961 4_1:-32844872 Msa0544410:CDS
TAAGGGTTTCCGCCATTGGT+AGG 0.445337 4_1:+32849423 None:intergenic
GACGGAGTTTGGTAGGGCTA+AGG 0.455399 4_1:+32849405 None:intergenic
TCAATATGCCTTCCACCTGT+TGG 0.459277 4_1:-32844812 Msa0544410:CDS
TATCCAAAGCTTCCCCAACT+TGG 0.459993 4_1:-32844843 Msa0544410:CDS
TTCTTAGTCTTTGTCTGCCT+AGG 0.462830 4_1:+32846150 None:intergenic
GGGCTAAGGGTTTCCGCCAT+TGG 0.465043 4_1:+32849419 None:intergenic
CGCAGTTGTCTGGCGATAGA+GGG 0.465933 4_1:+32847114 None:intergenic
CAAGTTCCTCTGGCTGGTAG+TGG 0.466861 4_1:+32845989 None:intergenic
GAAAATAATAAAAGACCTAC+TGG 0.469483 4_1:-32846758 Msa0544410:CDS
TGAGGATAACTAGGGAAACT+TGG 0.476403 4_1:+32846578 None:intergenic
TCTTCCGCTGAATTCTGGCC+AGG 0.480249 4_1:+32846725 None:intergenic
TCTTTAGTGTCTTGGGAGGA+GGG 0.481315 4_1:-32845815 Msa0544410:intron
GTTCAACCTACTTCCGAAGA+TGG 0.485975 4_1:-32846186 Msa0544410:CDS
AAGTTTCCCTAGTTATCCTC+AGG 0.486215 4_1:-32846576 Msa0544410:intron
GTTGACCCATCTTCGGAAGT+AGG 0.486447 4_1:+32846180 None:intergenic
TTTCAGGGTTGACCCATCTT+CGG 0.487534 4_1:+32846173 None:intergenic
TCAAATAATAAGTTGATGAA+TGG 0.487677 4_1:-32844113 Msa0544410:three_prime_UTR
GTGTCAAAATTTATTCACTC+AGG 0.492694 4_1:-32847825 Msa0544410:CDS
TCAGGAATTAGAAAATAGTT+CGG 0.493471 4_1:-32844767 Msa0544410:intron
TGTGAAATCTAAATCAACTT+CGG 0.494252 4_1:+32846122 None:intergenic
GCAAGCTGCACTCTTGAGGC+CGG 0.496144 4_1:-32847847 Msa0544410:CDS
ATCGTTGGAACCTAAGATGA+AGG 0.502080 4_1:+32849346 None:intergenic
ACAGGGAGACGGAGTTTGGT+AGG 0.502179 4_1:+32849398 None:intergenic
ATGGGTCAACCCTGAAACCT+AGG 0.504650 4_1:-32846167 Msa0544410:CDS
GTATGACAAAACGTCCAAAC+AGG 0.507130 4_1:-32845308 Msa0544410:CDS
TAATACTTAACAGAAAATGT+AGG 0.507813 4_1:+32844061 None:intergenic
TTAATTCAAAACATAATGCA+TGG 0.511883 4_1:-32846346 Msa0544410:CDS
AATTAATGAGTATCACCAAC+AGG 0.512465 4_1:+32844797 None:intergenic
CCATTCCCTTCTTGGGACAA+TGG 0.512756 4_1:-32845615 Msa0544410:CDS
TCTTATTACACAGCCACGTC+AGG 0.513647 4_1:-32845520 Msa0544410:intron
GTCATCATGATCGTCACTCC+AGG 0.515674 4_1:+32846640 None:intergenic
CTTAACAGAAAATGTAGGGT+GGG 0.516231 4_1:+32844066 None:intergenic
ATTCTTGCGGCGGATTGCAG+CGG 0.516427 4_1:+32849286 None:intergenic
TTCACAAAGCAACACACCTC+TGG 0.516439 4_1:+32846937 None:intergenic
TCAAAACATAATGCATGGGC+AGG 0.517029 4_1:-32846341 Msa0544410:CDS
GCAGGCAAGCTGCACTCTTG+AGG 0.517638 4_1:-32847851 Msa0544410:intron
ACCTAAGATGAAGGGGCTGG+TGG 0.518162 4_1:+32849355 None:intergenic
TCTGAGGCATATAAAGTCCT+TGG 0.519724 4_1:-32847787 Msa0544410:CDS
AATGTTGAAAATGGACAAGA+AGG 0.520677 4_1:-32847416 Msa0544410:CDS
GGTGCATTTGCAGATGCAGA+TGG 0.520905 4_1:-32845666 Msa0544410:intron
ACGGAGTTTGGTAGGGCTAA+GGG 0.522028 4_1:+32849406 None:intergenic
GGCTGTGTAATAAGAGTGCC+TGG 0.522506 4_1:+32845528 None:intergenic
AATAGCTTGACAAGTTCCTC+TGG 0.524415 4_1:+32845979 None:intergenic
CCAAACTATAGGATACAAAT+GGG 0.526095 4_1:+32844149 None:intergenic
GTTAAGACACGGATCGGAGT+CGG 0.529066 4_1:+32849238 None:intergenic
AAGGGTTTCCGCCATTGGTA+GGG 0.529436 4_1:+32849424 None:intergenic
GCACTTCCATTGTCCCAAGA+AGG 0.532754 4_1:+32845609 None:intergenic
AAAATGGACAAGAAGGAAGC+AGG 0.532831 4_1:-32847409 Msa0544410:CDS
CCTAAGATGAAGGGGCTGGT+GGG 0.534868 4_1:+32849356 None:intergenic
GCAGCGGCATTGCATTCACC+TGG 0.536954 4_1:+32844938 None:intergenic
TATTGAAAGATCATCCAAGT+TGG 0.537530 4_1:+32844829 None:intergenic
GGTGGATTCGGTTCATTCTG+AGG 0.540337 4_1:-32847803 Msa0544410:CDS
AATATGACAATGGCGCGACC+TGG 0.541035 4_1:-32846658 Msa0544410:CDS
GCTTGACAAGTTCCTCTGGC+TGG 0.543855 4_1:+32845983 None:intergenic
GTTGTCACCTTTGTCAACAC+TGG 0.545624 4_1:-32847290 Msa0544410:CDS
AATTGTGAAAATGGCGCTGA+CGG 0.546346 4_1:-32846686 Msa0544410:CDS
CACTTCCATTGTCCCAAGAA+GGG 0.551439 4_1:+32845610 None:intergenic
TTTACTATAGTCCTCAGAGT+TGG 0.551477 4_1:+32846791 None:intergenic
TTACTTTGTTGTAGTCTCTG+AGG 0.553886 4_1:-32846208 Msa0544410:intron
CATAGTGACATAGAGGATCC+AGG 0.556836 4_1:-32845546 Msa0544410:CDS
TTCAACCTACTTCCGAAGAT+GGG 0.557125 4_1:-32846185 Msa0544410:CDS
GCTTGCGGTGGCGATGAGGC+TGG 0.559269 4_1:-32845588 Msa0544410:CDS
AATACTTAACAGAAAATGTA+GGG 0.562499 4_1:+32844062 None:intergenic
TTTCTTTGTAGATTGTGTTG+AGG 0.563094 4_1:-32846852 Msa0544410:CDS
TAATTCAAAACATAATGCAT+GGG 0.563594 4_1:-32846345 Msa0544410:CDS
CTGTTTGTTAAGACACGGAT+CGG 0.565979 4_1:+32849232 None:intergenic
ATTTCTGCTTCCGGATGTGA+AGG 0.568316 4_1:-32845959 Msa0544410:intron
ACAGATTTGAAAATGTTGAT+GGG 0.569312 4_1:-32846391 Msa0544410:CDS
TGCGTGCGGCAACAGGGAGA+CGG 0.570618 4_1:+32849387 None:intergenic
TCTGGCAAAAGAAAGATCAA+TGG 0.571169 4_1:+32846955 None:intergenic
GAGCCTAGATCAGCAATGAC+TGG 0.571335 4_1:+32846614 None:intergenic
GAGGCATATAAAGTCCTTGG+TGG 0.572960 4_1:-32847784 Msa0544410:CDS
CTAGATCAGCAATGACTGGT+TGG 0.573390 4_1:+32846618 None:intergenic
TTAACAGAAAATGTAGGGTG+GGG 0.573854 4_1:+32844067 None:intergenic
TATGTAACAAGAAGTTTCAC+CGG 0.575684 4_1:+32846910 None:intergenic
GGAACCTAAGATGAAGGGGC+TGG 0.579975 4_1:+32849352 None:intergenic
TGTCAAAATTTATTCACTCA+GGG 0.580906 4_1:-32847824 Msa0544410:CDS
CAAAATTTATTCACTCAGGG+TGG 0.582175 4_1:-32847821 Msa0544410:CDS
TACCTTCTGAAAATTAGTCT+CGG 0.586056 4_1:+32848994 None:intergenic
GTCATCCATATCAGAGTCTG+TGG 0.588088 4_1:+32846412 None:intergenic
GTGTTGCTTTGTGAAATATC+CGG 0.589888 4_1:-32846929 Msa0544410:CDS
CTTGGTGGGATGAATAGAGC+AGG 0.590604 4_1:-32847769 Msa0544410:CDS
TTTGACGAAGGAGGAGCCAA+AGG 0.590682 4_1:-32847088 Msa0544410:CDS
TCGTTGGAACCTAAGATGAA+GGG 0.591646 4_1:+32849347 None:intergenic
TGATCATCATAGTGACATAG+AGG 0.592404 4_1:-32845553 Msa0544410:CDS
CGTCGAGAGATTGAGAAACC+GGG 0.595720 4_1:+32849261 None:intergenic
AATTCAAATTGCAAAACTGG+AGG 0.596382 4_1:-32849500 Msa0544410:five_prime_UTR
CAGGGAGACGGAGTTTGGTA+GGG 0.597407 4_1:+32849399 None:intergenic
ATCTGCTGTTTGTTAAGACA+CGG 0.598075 4_1:+32849227 None:intergenic
TGGGACAATGGAAGTGCTTG+CGG 0.601019 4_1:-32845603 Msa0544410:CDS
GAGGATAACTAGGGAAACTT+GGG 0.601691 4_1:+32846579 None:intergenic
GCAGGCCAAGAAGCTGAGCA+AGG 0.603755 4_1:-32847751 Msa0544410:intron
ACTGGATGCGTGCGGCAACA+GGG 0.606041 4_1:+32849381 None:intergenic
GCGTTCGAGCTGGTCATCGT+TGG 0.607845 4_1:+32849331 None:intergenic
AGACATATGAAGCACAAATG+AGG 0.608018 4_1:+32844896 None:intergenic
TTGAAAGATCATCCAAGTTG+GGG 0.608431 4_1:+32844831 None:intergenic
GAGTATCACCAACAGGTGGA+AGG 0.610758 4_1:+32844804 None:intergenic
AATCCGCCGCAAGAATCTCC+CGG 0.612724 4_1:-32849279 Msa0544410:CDS
CCATTGTCCCAAGAAGGGAA+TGG 0.613885 4_1:+32845615 None:intergenic
AAGTGCTTGCGGTGGCGATG+AGG 0.614531 4_1:-32845592 Msa0544410:CDS
CGTTGGAACCTAAGATGAAG+GGG 0.615786 4_1:+32849348 None:intergenic
CATAATGTCAGACACTACAC+TGG 0.616868 4_1:-32847447 Msa0544410:CDS
TCTTTCTTTAGTGTCTTGGG+AGG 0.617208 4_1:-32845819 Msa0544410:intron
GCTTAACAGATGCTTGAACA+TGG 0.618407 4_1:+32845251 None:intergenic
TCGGTGTATATGGTGGATGT+AGG 0.619413 4_1:-32847048 Msa0544410:CDS
TCGATTCCAAACCCTACCAA+TGG 0.621013 4_1:-32849435 Msa0544410:exon
GCAGTTGTCTGGCGATAGAG+GGG 0.622554 4_1:+32847115 None:intergenic
ATTCCAAACCCTACCAATGG+CGG 0.625368 4_1:-32849432 Msa0544410:exon
AAACCGGGAGATTCTTGCGG+CGG 0.627825 4_1:+32849276 None:intergenic
GAGAAACCGGGAGATTCTTG+CGG 0.629116 4_1:+32849273 None:intergenic
AGGCATATAAAGTCCTTGGT+GGG 0.632793 4_1:-32847783 Msa0544410:CDS
ATCCATATCAGAGTCTGTGG+AGG 0.634191 4_1:+32846415 None:intergenic
GATGATTCCAGTGTTGACAA+AGG 0.634680 4_1:+32847283 None:intergenic
ATGAAATTTCTCCAACTCTG+AGG 0.635773 4_1:-32846802 Msa0544410:CDS
GGTGGGAGACTGGATGCGTG+CGG 0.636745 4_1:+32849373 None:intergenic
ACTTAACAGAAAATGTAGGG+TGG 0.638779 4_1:+32844065 None:intergenic
ACTTCCTGGCCAGAATTCAG+CGG 0.642146 4_1:-32846729 Msa0544410:CDS
CCAGGAAGTTGAAAACCAGT+AGG 0.642526 4_1:+32846743 None:intergenic
ATTCAAATTGCAAAACTGGA+GGG 0.645017 4_1:-32849499 Msa0544410:five_prime_UTR
TCCATATCAGAGTCTGTGGA+GGG 0.645582 4_1:+32846416 None:intergenic
TCAATAAAACCTACCTGACG+TGG 0.647033 4_1:+32845507 None:intergenic
GACAAACCTGAGGATAACTA+GGG 0.648663 4_1:+32846570 None:intergenic
AATGTCAGACACTACACTGG+AGG 0.649854 4_1:-32847444 Msa0544410:CDS
TTGCAACACAAAACTTCCAG+AGG 0.652553 4_1:-32846016 Msa0544410:CDS
GATGAGGCTGGTGATTATGA+AGG 0.653118 4_1:-32845576 Msa0544410:CDS
ATGTCAGACACTACACTGGA+GGG 0.658980 4_1:-32847443 Msa0544410:CDS
AATAATCTCGGTGTATATGG+TGG 0.660208 4_1:-32847055 Msa0544410:CDS
ACTGCGAAATTTGACGAAGG+AGG 0.665207 4_1:-32847097 Msa0544410:CDS
TAATGAGTATCACCAACAGG+TGG 0.666458 4_1:+32844800 None:intergenic
AATGTCACTGATGTTTGCAG+CGG 0.674186 4_1:+32844922 None:intergenic
GACGGAGAAGAATATGACAA+TGG 0.675138 4_1:-32846668 Msa0544410:CDS
CTGCTCTATTCATCCCACCA+AGG 0.688474 4_1:+32847770 None:intergenic
GACAATGGAAGTGCTTGCGG+TGG 0.689721 4_1:-32845600 Msa0544410:CDS
ACAACTGCGAAATTTGACGA+AGG 0.719142 4_1:-32847100 Msa0544410:CDS
GGACTGCCACTACCAGCCAG+AGG 0.722451 4_1:-32845995 Msa0544410:CDS
AAACCGAAACACATTCAATG+TGG 0.728632 4_1:-32846884 Msa0544410:CDS
TTGGAATCGAGAGAGTGACG+AGG 0.750339 4_1:+32849448 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTTTCATTAAAATTTTATTT+TGG - chr4_1:32845643-32845662 Msa0544410:CDS 10.0%
!! GAAATTAAATACTAGATTAT+GGG - chr4_1:32844688-32844707 Msa0544410:intron 15.0%
!! ACAAGAATACAAAAATTAAA+GGG + chr4_1:32845364-32845383 None:intergenic 15.0%
!! TACAAGAATACAAAAATTAA+AGG + chr4_1:32845365-32845384 None:intergenic 15.0%
!!! AGTAAAATTCTAAATTTTGT+AGG - chr4_1:32847064-32847083 Msa0544410:CDS 15.0%
!!! ATTAGTCTACATTTTTAAAA+AGG + chr4_1:32847762-32847781 None:intergenic 15.0%
!! ATTTACGATTAAATTTGTAA+TGG + chr4_1:32849123-32849142 None:intergenic 15.0%
!!! GATTAATTTAGTTTGATATT+TGG + chr4_1:32849483-32849502 None:intergenic 15.0%
!! AAATCAATCAGAAAAATACT+TGG - chr4_1:32844442-32844461 Msa0544410:intron 20.0%
!! AATCAATCAGAAAAATACTT+GGG - chr4_1:32844443-32844462 Msa0544410:intron 20.0%
!! TCATCTTACTGATATTATTA+AGG - chr4_1:32844482-32844501 Msa0544410:intron 20.0%
!!! AAGTGTTTGGATTTTATATT+TGG - chr4_1:32844589-32844608 Msa0544410:intron 20.0%
!! GGAAATTAAATACTAGATTA+TGG - chr4_1:32844687-32844706 Msa0544410:intron 20.0%
!! TCGATAACAATTTAAGAAAA+TGG - chr4_1:32844775-32844794 Msa0544410:three_prime_UTR 20.0%
!!! ATTAAAATTTTATTTTGGGC+AGG - chr4_1:32845648-32845667 Msa0544410:CDS 20.0%
!! TTCATAAGATATCAAACATT+AGG + chr4_1:32845960-32845979 None:intergenic 20.0%
!! TATGAATGTACAAATTCAAA+CGG - chr4_1:32845974-32845993 Msa0544410:CDS 20.0%
!! ATTATTCATTAAAAGACCTT+TGG + chr4_1:32846448-32846467 None:intergenic 20.0%
!!! TTTTATTATTTTCATCGAAC+TGG + chr4_1:32846752-32846771 None:intergenic 20.0%
!! TTAATTCAAAACATAATGCA+TGG - chr4_1:32847171-32847190 Msa0544410:intron 20.0%
!! TAATTCAAAACATAATGCAT+GGG - chr4_1:32847172-32847191 Msa0544410:intron 20.0%
!! AACATTAAAATCTCTTTATC+TGG + chr4_1:32847248-32847267 None:intergenic 20.0%
!! AGTATCTTTCAAGAATTTAT+TGG - chr4_1:32848548-32848567 Msa0544410:intron 20.0%
!!! GTTAGAAAAGTAACTTTTTT+TGG - chr4_1:32848874-32848893 Msa0544410:intron 20.0%
!!! AATTCTATGAACAAAAGTAT+GGG + chr4_1:32848963-32848982 None:intergenic 20.0%
!! AAATTCTATGAACAAAAGTA+TGG + chr4_1:32848964-32848983 None:intergenic 20.0%
!!! TAAATTTGTAATGGACAAAT+AGG + chr4_1:32849114-32849133 None:intergenic 20.0%
!!! TCAAATAATAAGTTGATGAA+TGG - chr4_1:32849404-32849423 Msa0544410:CDS 20.0%
!! AATACTTAACAGAAAATGTA+GGG + chr4_1:32849458-32849477 None:intergenic 20.0%
!! TAATACTTAACAGAAAATGT+AGG + chr4_1:32849459-32849478 None:intergenic 20.0%
!!! AATTTTGTTTACATTTTCGC+TGG + chr4_1:32844348-32844367 None:intergenic 25.0%
!!! CGTTGTTTGTTTTAATTTCT+TGG - chr4_1:32844563-32844582 Msa0544410:intron 25.0%
! TTCCAAATTTACTAGATTAG+AGG - chr4_1:32844666-32844685 Msa0544410:intron 25.0%
! TTCCTCTAATCTAGTAAATT+TGG + chr4_1:32844671-32844690 None:intergenic 25.0%
! TTGAATGTAATTACATGTGT+AGG - chr4_1:32844804-32844823 Msa0544410:CDS 25.0%
! TTAACAAGATGATATTGATG+TGG - chr4_1:32845118-32845137 Msa0544410:intron 25.0%
!!! CTTTTAGAACTTGATTTTGA+TGG - chr4_1:32845197-32845216 Msa0544410:intron 25.0%
!!! ACTGTATTTTGTCATTTTGA+TGG - chr4_1:32845244-32845263 Msa0544410:CDS 25.0%
!!! CTGTATTTTGTCATTTTGAT+GGG - chr4_1:32845245-32845264 Msa0544410:CDS 25.0%
! TGAGTATTTATGTATCTTGT+TGG - chr4_1:32845389-32845408 Msa0544410:intron 25.0%
!!! TTTTTTAGTCTTCACAATAG+CGG - chr4_1:32845432-32845451 Msa0544410:intron 25.0%
!!! TATTTTAGTCTTCACAATAG+CGG - chr4_1:32845526-32845545 Msa0544410:CDS 25.0%
!! TATTTGGGATTAACAACTTA+GGG - chr4_1:32845576-32845595 Msa0544410:CDS 25.0%
! GTTATATACGTGTATACTTT+AGG - chr4_1:32845618-32845637 Msa0544410:CDS 25.0%
! TGTCAAAATTTATTCACTCA+GGG - chr4_1:32845693-32845712 Msa0544410:intron 25.0%
!! CTAATAACGGAAATAGAATA+AGG + chr4_1:32846304-32846323 None:intergenic 25.0%
!! ATGCTGCTTATAACTAATAA+CGG + chr4_1:32846317-32846336 None:intergenic 25.0%
!! GGTCTTTTAATGAATAATCT+CGG - chr4_1:32846450-32846469 Msa0544410:intron 25.0%
! GAAAATAATAAAAGACCTAC+TGG - chr4_1:32846759-32846778 Msa0544410:CDS 25.0%
!!! GCCATTTTCACAATTAAAAT+CGG + chr4_1:32846826-32846845 None:intergenic 25.0%
!! ACTTGTTAGAATATCAAAAG+AGG + chr4_1:32847026-32847045 None:intergenic 25.0%
! ACAGATTTGAAAATGTTGAT+GGG - chr4_1:32847126-32847145 Msa0544410:CDS 25.0%
!! TTTTATACTTCCAATGATCA+GGG + chr4_1:32847202-32847221 None:intergenic 25.0%
!! TTTTTATACTTCCAATGATC+AGG + chr4_1:32847203-32847222 None:intergenic 25.0%
!! TGGAAGTATAAAAAATCCAA+AGG - chr4_1:32847209-32847228 Msa0544410:intron 25.0%
! AAGTATAAAAAATCCAAAGG+TGG - chr4_1:32847212-32847231 Msa0544410:intron 25.0%
! AGTATAAAAAATCCAAAGGT+GGG - chr4_1:32847213-32847232 Msa0544410:intron 25.0%
! TGTGAAATCTAAATCAACTT+CGG + chr4_1:32847398-32847417 None:intergenic 25.0%
! TTTAGATTTCACAAATTCTC+TGG - chr4_1:32847405-32847424 Msa0544410:CDS 25.0%
! TGATCAAAAGAAAGTAGTTT+CGG - chr4_1:32847597-32847616 Msa0544410:intron 25.0%
!! TTTCAAAGTACTTTCTTGTA+TGG - chr4_1:32847637-32847656 Msa0544410:intron 25.0%
! TTAGATTGTATTTCAAGCTT+AGG - chr4_1:32847830-32847849 Msa0544410:CDS 25.0%
!! TATTTTACTGACCTGTTATT+CGG + chr4_1:32848181-32848200 None:intergenic 25.0%
! AACTGTAGCAAATTTCATTT+CGG + chr4_1:32848376-32848395 None:intergenic 25.0%
!!! AAATGAAATTTGCTACAGTT+AGG - chr4_1:32848376-32848395 Msa0544410:intron 25.0%
! AATTAGAACTTATCATTCAG+TGG + chr4_1:32848476-32848495 None:intergenic 25.0%
!!! AATTTATTGGCTAATTTTCC+AGG - chr4_1:32848561-32848580 Msa0544410:intron 25.0%
! TCAGGAATTAGAAAATAGTT+CGG - chr4_1:32848750-32848769 Msa0544410:intron 25.0%
! ATCTATTGACCCAAAAATAA+TGG + chr4_1:32849009-32849028 None:intergenic 25.0%
! CAATAATCAATCCAAACTAT+AGG + chr4_1:32849382-32849401 None:intergenic 25.0%
ACCAATTCAAATTGCAAAAC+TGG - chr4_1:32844014-32844033 Msa0544410:three_prime_UTR 30.0%
! TCCAGTTTTGCAATTTGAAT+TGG + chr4_1:32844018-32844037 None:intergenic 30.0%
AATTCAAATTGCAAAACTGG+AGG - chr4_1:32844017-32844036 Msa0544410:three_prime_UTR 30.0%
ATTCAAATTGCAAAACTGGA+GGG - chr4_1:32844018-32844037 Msa0544410:three_prime_UTR 30.0%
! TACCTTCTGAAAATTAGTCT+CGG + chr4_1:32844526-32844545 None:intergenic 30.0%
AATTTCTTGGTTCAAGTGTT+TGG - chr4_1:32844576-32844595 Msa0544410:intron 30.0%
!! AGATTAGATGTTTGCTGTAT+AGG - chr4_1:32844626-32844645 Msa0544410:intron 30.0%
! ACAATTTCAATCTGAAGTGT+AGG - chr4_1:32844846-32844865 Msa0544410:CDS 30.0%
AGATTGCTATAGTGATATAG+TGG + chr4_1:32845027-32845046 None:intergenic 30.0%
!!! TTTTTTAGTCTTCGCAATAG+CGG - chr4_1:32845478-32845497 Msa0544410:intron 30.0%
! CTATTTGGGATTAACAACTT+AGG - chr4_1:32845575-32845594 Msa0544410:CDS 30.0%
! ATTTGGGATTAACAACTTAG+GGG - chr4_1:32845577-32845596 Msa0544410:CDS 30.0%
!! GAGTGAATAAATTTTGACAC+CGG + chr4_1:32845692-32845711 None:intergenic 30.0%
GTGTCAAAATTTATTCACTC+AGG - chr4_1:32845692-32845711 Msa0544410:intron 30.0%
ATATGCTAGGCTTAATAAGA+GGG + chr4_1:32845804-32845823 None:intergenic 30.0%
AATATGCTAGGCTTAATAAG+AGG + chr4_1:32845805-32845824 None:intergenic 30.0%
AAAGAGAATCAGAATATGCT+AGG + chr4_1:32845817-32845836 None:intergenic 30.0%
! TACTGCAGTACATTTACTTT+TGG - chr4_1:32846002-32846021 Msa0544410:CDS 30.0%
AATGTTGAAAATGGACAAGA+AGG - chr4_1:32846101-32846120 Msa0544410:CDS 30.0%
AGATAAAAAGGTCAATAGTC+TGG - chr4_1:32846139-32846158 Msa0544410:CDS 30.0%
!!! TGGATTTTTTTGATCATGAC+TGG - chr4_1:32846159-32846178 Msa0544410:CDS 30.0%
CTCAATGTAAAGAAGTTTGA+TGG - chr4_1:32846267-32846286 Msa0544410:intron 30.0%
! ATGAATAATCTCGGTGTATA+TGG - chr4_1:32846459-32846478 Msa0544410:intron 30.0%
! CTGAAATATCAGGTTCATTT+TGG + chr4_1:32846539-32846558 None:intergenic 30.0%
! TCAATGGTATCTGAAATATC+AGG + chr4_1:32846549-32846568 None:intergenic 30.0%
TATGTAACAAGAAGTTTCAC+CGG + chr4_1:32846610-32846629 None:intergenic 30.0%
TTTCTTTGTAGATTGTGTTG+AGG - chr4_1:32846665-32846684 Msa0544410:CDS 30.0%
!!! GCCGATTTTAATTGTGAAAA+TGG - chr4_1:32846822-32846841 Msa0544410:CDS 30.0%
AACAGACATAGAGGTTTATA+TGG + chr4_1:32846982-32847001 None:intergenic 30.0%
ATAAACCTCTATGTCTGTTT+AGG - chr4_1:32846983-32847002 Msa0544410:CDS 30.0%
TTGATATTCTAACAAGTGAG+TGG - chr4_1:32847029-32847048 Msa0544410:CDS 30.0%
GACAGATTTGAAAATGTTGA+TGG - chr4_1:32847125-32847144 Msa0544410:CDS 30.0%
!!! AGTAATGTTTTGGGATTCTT+CGG + chr4_1:32847460-32847479 None:intergenic 30.0%
AAAAAAACTACCTTCACATC+CGG + chr4_1:32847571-32847590 None:intergenic 30.0%
ATGTTCTTTCTTTAGTGTCT+TGG - chr4_1:32847694-32847713 Msa0544410:intron 30.0%
TGTTCTTTCTTTAGTGTCTT+GGG - chr4_1:32847695-32847714 Msa0544410:intron 30.0%
TGCTCTTAATAAATTCCTCT+AGG - chr4_1:32848043-32848062 Msa0544410:intron 30.0%
AAGTGCTAAAAGTTACTCTT+TGG - chr4_1:32848241-32848260 Msa0544410:intron 30.0%
AGTGCTAAAAGTTACTCTTT+GGG - chr4_1:32848242-32848261 Msa0544410:intron 30.0%
! CTTAAGAAATGGAGGAATTT+TGG + chr4_1:32848311-32848330 None:intergenic 30.0%
TCCATTTCTTAAGAAATCCA+GGG - chr4_1:32848318-32848337 Msa0544410:intron 30.0%
ATTGAAAGATCATCCAAGTT+GGG + chr4_1:32848690-32848709 None:intergenic 30.0%
TATTGAAAGATCATCCAAGT+TGG + chr4_1:32848691-32848710 None:intergenic 30.0%
AATTAATGAGTATCACCAAC+AGG + chr4_1:32848723-32848742 None:intergenic 30.0%
TTAGAAAATAGTTCGGTAAG+TGG - chr4_1:32848757-32848776 Msa0544410:intron 30.0%
TTGAAGCAAGCAAGAAAAAT+TGG + chr4_1:32848842-32848861 None:intergenic 30.0%
TAGTTCAATCAATGCTTTCA+AGG - chr4_1:32848931-32848950 Msa0544410:intron 30.0%
TTGGGTCAATAGATTAATAG+AGG - chr4_1:32849015-32849034 Msa0544410:CDS 30.0%
AGGATCATAGATAACATATC+TGG - chr4_1:32849035-32849054 Msa0544410:CDS 30.0%
! AGATTGTAACAAGTAGCTTT+TGG - chr4_1:32849254-32849273 Msa0544410:CDS 30.0%
CCAAACTATAGGATACAAAT+GGG + chr4_1:32849371-32849390 None:intergenic 30.0%
TCCAAACTATAGGATACAAA+TGG + chr4_1:32849372-32849391 None:intergenic 30.0%
! ATCTGCTGTTTGTTAAGACA+CGG + chr4_1:32844293-32844312 None:intergenic 35.0%
! TACCGAGACTAATTTTCAGA+AGG - chr4_1:32844521-32844540 Msa0544410:intron 35.0%
! TAGGTGCTATATAGCTTACT+AGG - chr4_1:32844865-32844884 Msa0544410:CDS 35.0%
! AGGTGCTATATAGCTTACTA+GGG - chr4_1:32844866-32844885 Msa0544410:CDS 35.0%
!!! TTTTTTGTAGCCGCAAATTG+CGG - chr4_1:32844989-32845008 Msa0544410:intron 35.0%
ACAAGATGATATTGATGTGG+TGG - chr4_1:32845121-32845140 Msa0544410:intron 35.0%
! TCATCCCACTATAGCATTTT+TGG - chr4_1:32845549-32845568 Msa0544410:CDS 35.0%
! CATCCCACTATAGCATTTTT+GGG - chr4_1:32845550-32845569 Msa0544410:CDS 35.0%
!!! TAGCATTTTTGGGTGCTATT+TGG - chr4_1:32845560-32845579 Msa0544410:CDS 35.0%
!!! AGCATTTTTGGGTGCTATTT+GGG - chr4_1:32845561-32845580 Msa0544410:CDS 35.0%
CAAAATTTATTCACTCAGGG+TGG - chr4_1:32845696-32845715 Msa0544410:intron 35.0%
!! GAGGGTGTTAATGTTGAAAA+TGG - chr4_1:32846092-32846111 Msa0544410:CDS 35.0%
CAGGAAAGAGACAGATAAAA+AGG - chr4_1:32846127-32846146 Msa0544410:CDS 35.0%
! AACACTGGAATCATCTTTTG+AGG - chr4_1:32846242-32846261 Msa0544410:intron 35.0%
AGTTATAAGCAGCATGTTTG+AGG - chr4_1:32846322-32846341 Msa0544410:CDS 35.0%
! AATAATCTCGGTGTATATGG+TGG - chr4_1:32846462-32846481 Msa0544410:intron 35.0%
TCTGGCAAAAGAAAGATCAA+TGG + chr4_1:32846565-32846584 None:intergenic 35.0%
! ATTGATCTTTCTTTTGCCAG+AGG - chr4_1:32846564-32846583 Msa0544410:intron 35.0%
!! GTGTTGCTTTGTGAAATATC+CGG - chr4_1:32846588-32846607 Msa0544410:CDS 35.0%
AAACCGAAACACATTCAATG+TGG - chr4_1:32846633-32846652 Msa0544410:CDS 35.0%
TCACCACATTGAATGTGTTT+CGG + chr4_1:32846639-32846658 None:intergenic 35.0%
ATGAAATTTCTCCAACTCTG+AGG - chr4_1:32846715-32846734 Msa0544410:CDS 35.0%
TTTACTATAGTCCTCAGAGT+TGG + chr4_1:32846729-32846748 None:intergenic 35.0%
AAAAATCCAAAGGTGGGATT+TGG - chr4_1:32847219-32847238 Msa0544410:intron 35.0%
! TTACTTTGTTGTAGTCTCTG+AGG - chr4_1:32847309-32847328 Msa0544410:intron 35.0%
! TCAGGGAGAAGTAATGTTTT+GGG + chr4_1:32847469-32847488 None:intergenic 35.0%
! TTCAGGGAGAAGTAATGTTT+TGG + chr4_1:32847470-32847489 None:intergenic 35.0%
GATCTCTATATGTACAAGCA+CGG + chr4_1:32847787-32847806 None:intergenic 35.0%
TGATCATCATAGTGACATAG+AGG - chr4_1:32847964-32847983 Msa0544410:intron 35.0%
TCAGTGTGTATAATACCTAG+AGG + chr4_1:32848061-32848080 None:intergenic 35.0%
TTCAGTCAAAATATTGCAGC+AGG - chr4_1:32848126-32848145 Msa0544410:intron 35.0%
TATGCTTGTTTCCGAATAAC+AGG - chr4_1:32848167-32848186 Msa0544410:intron 35.0%
!! GAATTTTGGTATACCTGAAC+AGG + chr4_1:32848297-32848316 None:intergenic 35.0%
CTGGATTTCTTAAGAAATGG+AGG + chr4_1:32848319-32848338 None:intergenic 35.0%
CTCCATTTCTTAAGAAATCC+AGG - chr4_1:32848317-32848336 Msa0544410:intron 35.0%
ACCCTGGATTTCTTAAGAAA+TGG + chr4_1:32848322-32848341 None:intergenic 35.0%
!!! GTGCTATTTTAACTCTCCAT+AGG - chr4_1:32848412-32848431 Msa0544410:intron 35.0%
!! TGTAATGCTCTAGAATCCTA+TGG + chr4_1:32848431-32848450 None:intergenic 35.0%
!! TGTTGACTCTCTATTCTACA+GGG - chr4_1:32848513-32848532 Msa0544410:intron 35.0%
AGACATATGAAGCACAAATG+AGG + chr4_1:32848624-32848643 None:intergenic 35.0%
CTTCATATGTCTACTGCATT+TGG - chr4_1:32848632-32848651 Msa0544410:intron 35.0%
TTGAAAGATCATCCAAGTTG+GGG + chr4_1:32848689-32848708 None:intergenic 35.0%
ACTCATTAATTCTGCAGTTC+AGG - chr4_1:32848732-32848751 Msa0544410:intron 35.0%
TGATACAGTTCCTGTCAAAT+TGG - chr4_1:32848796-32848815 Msa0544410:intron 35.0%
GATACAGTTCCTGTCAAATT+GGG - chr4_1:32848797-32848816 Msa0544410:intron 35.0%
ACAAATAGGACTCATAACTG+TGG + chr4_1:32849100-32849119 None:intergenic 35.0%
AGTTGTATGATATGAGGGAA+TGG + chr4_1:32849203-32849222 None:intergenic 35.0%
ACGTCAGTTGTATGATATGA+GGG + chr4_1:32849208-32849227 None:intergenic 35.0%
TACGTCAGTTGTATGATATG+AGG + chr4_1:32849209-32849228 None:intergenic 35.0%
! CTTATGCTTCAGTTTTCAGA+TGG - chr4_1:32849231-32849250 Msa0544410:CDS 35.0%
! TAACAAGTAGCTTTTGGTCA+TGG - chr4_1:32849260-32849279 Msa0544410:CDS 35.0%
CCCATTTGTATCCTATAGTT+TGG - chr4_1:32849368-32849387 Msa0544410:CDS 35.0%
TTAACAGAAAATGTAGGGTG+GGG + chr4_1:32849453-32849472 None:intergenic 35.0%
CTTAACAGAAAATGTAGGGT+GGG + chr4_1:32849454-32849473 None:intergenic 35.0%
ACTTAACAGAAAATGTAGGG+TGG + chr4_1:32849455-32849474 None:intergenic 35.0%
TCGTTGGAACCTAAGATGAA+GGG + chr4_1:32844173-32844192 None:intergenic 40.0%
ATCGTTGGAACCTAAGATGA+AGG + chr4_1:32844174-32844193 None:intergenic 40.0%
! CTGTTTGTTAAGACACGGAT+CGG + chr4_1:32844288-32844307 None:intergenic 40.0%
! TGGCGAGCTTTATACAATTC+TGG + chr4_1:32844328-32844347 None:intergenic 40.0%
!! AGATGTTTGCTGTATAGGTC+AGG - chr4_1:32844631-32844650 Msa0544410:intron 40.0%
CCTAATGGAGATTAGGAGTT+GGG - chr4_1:32845065-32845084 Msa0544410:intron 40.0%
CTAATGGAGATTAGGAGTTG+GGG - chr4_1:32845066-32845085 Msa0544410:intron 40.0%
GGAACTTAGAAGTGAAGATG+AGG - chr4_1:32845142-32845161 Msa0544410:intron 40.0%
GCACCCAAAAATGCTATAGT+GGG + chr4_1:32845556-32845575 None:intergenic 40.0%
AGCACCCAAAAATGCTATAG+TGG + chr4_1:32845557-32845576 None:intergenic 40.0%
GATTAACAACTTAGGGGTGA+AGG - chr4_1:32845583-32845602 Msa0544410:CDS 40.0%
! TTATTCACTCAGGGTGGATT+CGG - chr4_1:32845702-32845721 Msa0544410:intron 40.0%
! TCTGAGGCATATAAAGTCCT+TGG - chr4_1:32845730-32845749 Msa0544410:intron 40.0%
AGGCATATAAAGTCCTTGGT+GGG - chr4_1:32845734-32845753 Msa0544410:intron 40.0%
GTTTCTCGATGATTGCTTTG+TGG - chr4_1:32845868-32845887 Msa0544410:intron 40.0%
CTTTGTGGATGAGAGTTACA+GGG - chr4_1:32845883-32845902 Msa0544410:intron 40.0%
CATAATGTCAGACACTACAC+TGG - chr4_1:32846070-32846089 Msa0544410:CDS 40.0%
AAAATGGACAAGAAGGAAGC+AGG - chr4_1:32846108-32846127 Msa0544410:CDS 40.0%
!! GATGATTCCAGTGTTGACAA+AGG + chr4_1:32846237-32846256 None:intergenic 40.0%
ACAACTGCGAAATTTGACGA+AGG - chr4_1:32846417-32846436 Msa0544410:CDS 40.0%
!! AGAAGTACCTGCAAAGTGTA+TGG - chr4_1:32846509-32846528 Msa0544410:intron 40.0%
! AATTGTGAAAATGGCGCTGA+CGG - chr4_1:32846831-32846850 Msa0544410:CDS 40.0%
GACGGAGAAGAATATGACAA+TGG - chr4_1:32846849-32846868 Msa0544410:CDS 40.0%
GAGGATAACTAGGGAAACTT+GGG + chr4_1:32846941-32846960 None:intergenic 40.0%
TGAGGATAACTAGGGAAACT+TGG + chr4_1:32846942-32846961 None:intergenic 40.0%
AAGTTTCCCTAGTTATCCTC+AGG - chr4_1:32846941-32846960 Msa0544410:CDS 40.0%
GACAAACCTGAGGATAACTA+GGG + chr4_1:32846950-32846969 None:intergenic 40.0%
GTTAAAACACGACAAACCTG+AGG + chr4_1:32846960-32846979 None:intergenic 40.0%
CTCATCCTAAACAGACATAG+AGG + chr4_1:32846991-32847010 None:intergenic 40.0%
TGGGTTCTTATTCTTGAGTC+TGG - chr4_1:32847145-32847164 Msa0544410:intron 40.0%
GGGTTCTTATTCTTGAGTCT+GGG - chr4_1:32847146-32847165 Msa0544410:intron 40.0%
TCAAAACATAATGCATGGGC+AGG - chr4_1:32847176-32847195 Msa0544410:intron 40.0%
TTCAACCTACTTCCGAAGAT+GGG - chr4_1:32847332-32847351 Msa0544410:intron 40.0%
! TTCTTAGTCTTTGTCTGCCT+AGG + chr4_1:32847370-32847389 None:intergenic 40.0%
!!! AATGTTTTGGGATTCTTCGG+AGG + chr4_1:32847457-32847476 None:intergenic 40.0%
!! TCTGGAAGTTTTGTGTTGCA+AGG + chr4_1:32847502-32847521 None:intergenic 40.0%
TTGCAACACAAAACTTCCAG+AGG - chr4_1:32847501-32847520 Msa0544410:intron 40.0%
AATAGCTTGACAAGTTCCTC+TGG + chr4_1:32847541-32847560 None:intergenic 40.0%
!! TGTCAAGCTATTTCTGCTTC+CGG - chr4_1:32847549-32847568 Msa0544410:intron 40.0%
TCTTTCTTTAGTGTCTTGGG+AGG - chr4_1:32847698-32847717 Msa0544410:intron 40.0%
TCAATAAAACCTACCTGACG+TGG + chr4_1:32848013-32848032 None:intergenic 40.0%
! GTTTGGACGTTTTGTCATAC+TGG + chr4_1:32848209-32848228 None:intergenic 40.0%
GTATGACAAAACGTCCAAAC+AGG - chr4_1:32848209-32848228 Msa0544410:intron 40.0%
CACTTGAACATCAACCTGTT+TGG + chr4_1:32848226-32848245 None:intergenic 40.0%
GCTTAACAGATGCTTGAACA+TGG + chr4_1:32848269-32848288 None:intergenic 40.0%
! TTTTGGTATACCTGAACAGG+AGG + chr4_1:32848294-32848313 None:intergenic 40.0%
TACAATTATCCTTCCCTCTC+TGG - chr4_1:32848341-32848360 Msa0544410:intron 40.0%
GAACTTATCATTCAGTGGCA+AGG + chr4_1:32848471-32848490 None:intergenic 40.0%
!! CTGTTGACTCTCTATTCTAC+AGG - chr4_1:32848512-32848531 Msa0544410:intron 40.0%
AATGTCACTGATGTTTGCAG+CGG + chr4_1:32848598-32848617 None:intergenic 40.0%
CTGCATTTGGCAAATGAGAA+AGG - chr4_1:32848645-32848664 Msa0544410:intron 40.0%
TAATGAGTATCACCAACAGG+TGG + chr4_1:32848720-32848739 None:intergenic 40.0%
TCCTGTCAAATTGGGATTGA+TGG - chr4_1:32848805-32848824 Msa0544410:intron 40.0%
TCCATCAATCCCAATTTGAC+AGG + chr4_1:32848809-32848828 None:intergenic 40.0%
TGATATGAGGGAATGGATCA+AGG + chr4_1:32849196-32849215 None:intergenic 40.0%
TCGATTCCAAACCCTACCAA+TGG - chr4_1:32844082-32844101 Msa0544410:three_prime_UTR 45.0%
ATTCCAAACCCTACCAATGG+CGG - chr4_1:32844085-32844104 Msa0544410:three_prime_UTR 45.0%
CGTTGGAACCTAAGATGAAG+GGG + chr4_1:32844172-32844191 None:intergenic 45.0%
! AGCAGTGCTACTGACAACAT+AGG + chr4_1:32844896-32844915 None:intergenic 45.0%
TGTCAGTAGCACTGCTATAG+CGG - chr4_1:32844900-32844919 Msa0544410:CDS 45.0%
ACAAAAAACGCCACTGCTGA+AGG + chr4_1:32844977-32844996 None:intergenic 45.0%
AGCAAGATGTCCGCAATTTG+CGG + chr4_1:32845002-32845021 None:intergenic 45.0%
AGCTGTGCCTAATGGAGATT+AGG - chr4_1:32845058-32845077 Msa0544410:intron 45.0%
GCCTAATGGAGATTAGGAGT+TGG - chr4_1:32845064-32845083 Msa0544410:intron 45.0%
CCCAACTCCTAATCTCCATT+AGG + chr4_1:32845068-32845087 None:intergenic 45.0%
GAGGCATATAAAGTCCTTGG+TGG - chr4_1:32845733-32845752 Msa0544410:intron 45.0%
TGTAACCTTGCTCAGCTTCT+TGG + chr4_1:32845774-32845793 None:intergenic 45.0%
GCTTTGTGGATGAGAGTTAC+AGG - chr4_1:32845882-32845901 Msa0544410:intron 45.0%
AATGTCAGACACTACACTGG+AGG - chr4_1:32846073-32846092 Msa0544410:CDS 45.0%
ATGTCAGACACTACACTGGA+GGG - chr4_1:32846074-32846093 Msa0544410:CDS 45.0%
GTTGTCACCTTTGTCAACAC+TGG - chr4_1:32846227-32846246 Msa0544410:intron 45.0%
CGTCAAATTTCGCAGTTGTC+TGG + chr4_1:32846416-32846435 None:intergenic 45.0%
ACTGCGAAATTTGACGAAGG+AGG - chr4_1:32846420-32846439 Msa0544410:CDS 45.0%
!! TCGGTGTATATGGTGGATGT+AGG - chr4_1:32846469-32846488 Msa0544410:intron 45.0%
TGGCTTTCCATACACTTTGC+AGG + chr4_1:32846519-32846538 None:intergenic 45.0%
TTCACAAAGCAACACACCTC+TGG + chr4_1:32846583-32846602 None:intergenic 45.0%
CCAGGAAGTTGAAAACCAGT+AGG + chr4_1:32846777-32846796 None:intergenic 45.0%
!!! CCTACTGGTTTTCAACTTCC+TGG - chr4_1:32846774-32846793 Msa0544410:CDS 45.0%
CTAGATCAGCAATGACTGGT+TGG + chr4_1:32846902-32846921 None:intergenic 45.0%
CAACCAGTCATTGCTGATCT+AGG - chr4_1:32846900-32846919 Msa0544410:CDS 45.0%
CGACAAACCTGAGGATAACT+AGG + chr4_1:32846951-32846970 None:intergenic 45.0%
CTAACAAGTGAGTGGTTCAG+CGG - chr4_1:32847037-32847056 Msa0544410:CDS 45.0%
TCCATATCAGAGTCTGTGGA+GGG + chr4_1:32847104-32847123 None:intergenic 45.0%
ATCCATATCAGAGTCTGTGG+AGG + chr4_1:32847105-32847124 None:intergenic 45.0%
GTCATCCATATCAGAGTCTG+TGG + chr4_1:32847108-32847127 None:intergenic 45.0%
AATCCAAAGGTGGGATTTGG+AGG - chr4_1:32847222-32847241 Msa0544410:intron 45.0%
GTTCAACCTACTTCCGAAGA+TGG - chr4_1:32847331-32847350 Msa0544410:intron 45.0%
TTTCAGGGTTGACCCATCTT+CGG + chr4_1:32847347-32847366 None:intergenic 45.0%
CTTTGTCTGCCTAGGTTTCA+GGG + chr4_1:32847362-32847381 None:intergenic 45.0%
TCTTTGTCTGCCTAGGTTTC+AGG + chr4_1:32847363-32847382 None:intergenic 45.0%
!! GGAAGTTTTGTGTTGCAAGG+CGG + chr4_1:32847499-32847518 None:intergenic 45.0%
ATTTCTGCTTCCGGATGTGA+AGG - chr4_1:32847558-32847577 Msa0544410:intron 45.0%
TTCTTTAGTGTCTTGGGAGG+AGG - chr4_1:32847701-32847720 Msa0544410:intron 45.0%
TCTTTAGTGTCTTGGGAGGA+GGG - chr4_1:32847702-32847721 Msa0544410:intron 45.0%
AGGAGGGCAAAAAGATTCTC+AGG - chr4_1:32847718-32847737 Msa0544410:intron 45.0%
AGAACGATCCATTCCCTTCT+TGG - chr4_1:32847894-32847913 Msa0544410:intron 45.0%
GAACGATCCATTCCCTTCTT+GGG - chr4_1:32847895-32847914 Msa0544410:intron 45.0%
CACTTCCATTGTCCCAAGAA+GGG + chr4_1:32847910-32847929 None:intergenic 45.0%
GATGAGGCTGGTGATTATGA+AGG - chr4_1:32847941-32847960 Msa0544410:intron 45.0%
CATAGTGACATAGAGGATCC+AGG - chr4_1:32847971-32847990 Msa0544410:intron 45.0%
TCTTATTACACAGCCACGTC+AGG - chr4_1:32847997-32848016 Msa0544410:intron 45.0%
TGTTAAGCTTCCTCCTGTTC+AGG - chr4_1:32848281-32848300 Msa0544410:intron 45.0%
AGGGAAGGATAATTGTACCC+TGG + chr4_1:32848338-32848357 None:intergenic 45.0%
TATCCAAAGCTTCCCCAACT+TGG - chr4_1:32848674-32848693 Msa0544410:intron 45.0%
TCAATATGCCTTCCACCTGT+TGG - chr4_1:32848705-32848724 Msa0544410:intron 45.0%
!!! ATTATTTAATTTTTTGATTT+TGG - chr4_1:32844402-32844421 Msa0544410:intron 5.0%
!!! TTATTTAATTTTTTGATTTT+GGG - chr4_1:32844403-32844422 Msa0544410:intron 5.0%
!!! TTTCATTAAAATTTTATTTT+GGG - chr4_1:32845644-32845663 Msa0544410:CDS 5.0%
!! TTTAAAAAAAAAAAAATTGA+AGG + chr4_1:32849146-32849165 None:intergenic 5.0%
TTGGAATCGAGAGAGTGACG+AGG + chr4_1:32844072-32844091 None:intergenic 50.0%
TTTCCGCCATTGGTAGGGTT+TGG + chr4_1:32844091-32844110 None:intergenic 50.0%
AAGGGTTTCCGCCATTGGTA+GGG + chr4_1:32844096-32844115 None:intergenic 50.0%
TAAGGGTTTCCGCCATTGGT+AGG + chr4_1:32844097-32844116 None:intergenic 50.0%
ACGGAGTTTGGTAGGGCTAA+GGG + chr4_1:32844114-32844133 None:intergenic 50.0%
GAGAAACCGGGAGATTCTTG+CGG + chr4_1:32844247-32844266 None:intergenic 50.0%
CGTCGAGAGATTGAGAAACC+GGG + chr4_1:32844259-32844278 None:intergenic 50.0%
GCGTCGAGAGATTGAGAAAC+CGG + chr4_1:32844260-32844279 None:intergenic 50.0%
GTTAAGACACGGATCGGAGT+CGG + chr4_1:32844282-32844301 None:intergenic 50.0%
ACCGACAAGCTATGAAGCAC+TGG - chr4_1:32844723-32844742 Msa0544410:intron 50.0%
! GCCAGTGCTTCATAGCTTGT+CGG + chr4_1:32844727-32844746 None:intergenic 50.0%
! ATAGCGGAATAGCGTAGCAG+TGG - chr4_1:32844916-32844935 Msa0544410:CDS 50.0%
GGAATAGCGTAGCAGTGGTA+GGG - chr4_1:32844921-32844940 Msa0544410:CDS 50.0%
CCATTAGGCACAGCTGTAGT+GGG + chr4_1:32845053-32845072 None:intergenic 50.0%
TCCATTAGGCACAGCTGTAG+TGG + chr4_1:32845054-32845073 None:intergenic 50.0%
TGGAGATTAGGAGTTGGGGA+TGG - chr4_1:32845070-32845089 Msa0544410:intron 50.0%
! GGTGGATTCGGTTCATTCTG+AGG - chr4_1:32845714-32845733 Msa0544410:intron 50.0%
CTGCTCTATTCATCCCACCA+AGG + chr4_1:32845750-32845769 None:intergenic 50.0%
CTTGGTGGGATGAATAGAGC+AGG - chr4_1:32845748-32845767 Msa0544410:intron 50.0%
TTTGACGAAGGAGGAGCCAA+AGG - chr4_1:32846429-32846448 Msa0544410:CDS 50.0%
ACTTCCTGGCCAGAATTCAG+CGG - chr4_1:32846788-32846807 Msa0544410:CDS 50.0%
CAAGCTCTTCCGCTGAATTC+TGG + chr4_1:32846800-32846819 None:intergenic 50.0%
AATATGACAATGGCGCGACC+TGG - chr4_1:32846859-32846878 Msa0544410:CDS 50.0%
GTCATCATGATCGTCACTCC+AGG + chr4_1:32846880-32846899 None:intergenic 50.0%
GAGCCTAGATCAGCAATGAC+TGG + chr4_1:32846906-32846925 None:intergenic 50.0%
TCCCTCCACAGACTCTGATA+TGG - chr4_1:32847100-32847119 Msa0544410:CDS 50.0%
GTTGACCCATCTTCGGAAGT+AGG + chr4_1:32847340-32847359 None:intergenic 50.0%
ATGGGTCAACCCTGAAACCT+AGG - chr4_1:32847350-32847369 Msa0544410:intron 50.0%
GGTGCATTTGCAGATGCAGA+TGG - chr4_1:32847851-32847870 Msa0544410:intron 50.0%
CCATTGTCCCAAGAAGGGAA+TGG + chr4_1:32847905-32847924 None:intergenic 50.0%
CCATTCCCTTCTTGGGACAA+TGG - chr4_1:32847902-32847921 Msa0544410:intron 50.0%
GCACTTCCATTGTCCCAAGA+AGG + chr4_1:32847911-32847930 None:intergenic 50.0%
!! TGGGACAATGGAAGTGCTTG+CGG - chr4_1:32847914-32847933 Msa0544410:intron 50.0%
!! GGCTGTGTAATAAGAGTGCC+TGG + chr4_1:32847992-32848011 None:intergenic 50.0%
ATTACACAGCCACGTCAGGT+AGG - chr4_1:32848001-32848020 Msa0544410:intron 50.0%
TCAGAGAAACCAGAGAGGGA+AGG + chr4_1:32848353-32848372 None:intergenic 50.0%
TCGGTCAGAGAAACCAGAGA+GGG + chr4_1:32848357-32848376 None:intergenic 50.0%
TTCGGTCAGAGAAACCAGAG+AGG + chr4_1:32848358-32848377 None:intergenic 50.0%
! CATCCAAGTTGGGGAAGCTT+TGG + chr4_1:32848680-32848699 None:intergenic 50.0%
GAGTATCACCAACAGGTGGA+AGG + chr4_1:32848716-32848735 None:intergenic 50.0%
GACGGAGTTTGGTAGGGCTA+AGG + chr4_1:32844115-32844134 None:intergenic 55.0%
CAGGGAGACGGAGTTTGGTA+GGG + chr4_1:32844121-32844140 None:intergenic 55.0%
ACAGGGAGACGGAGTTTGGT+AGG + chr4_1:32844122-32844141 None:intergenic 55.0%
! CCTAAGATGAAGGGGCTGGT+GGG + chr4_1:32844164-32844183 None:intergenic 55.0%
ACCTAAGATGAAGGGGCTGG+TGG + chr4_1:32844165-32844184 None:intergenic 55.0%
GGAACCTAAGATGAAGGGGC+TGG + chr4_1:32844168-32844187 None:intergenic 55.0%
!! ATTCTTGCGGCGGATTGCAG+CGG + chr4_1:32844234-32844253 None:intergenic 55.0%
AATCCGCCGCAAGAATCTCC+CGG - chr4_1:32844238-32844257 Msa0544410:three_prime_UTR 55.0%
AAACCGGGAGATTCTTGCGG+CGG + chr4_1:32844244-32844263 None:intergenic 55.0%
CGGAATAGCGTAGCAGTGGT+AGG - chr4_1:32844920-32844939 Msa0544410:CDS 55.0%
AGCGTAGCAGTGGTAGGGTT+TGG - chr4_1:32844926-32844945 Msa0544410:CDS 55.0%
CCCACTACAGCTGTGCCTAA+TGG - chr4_1:32845050-32845069 Msa0544410:intron 55.0%
GCAGTTGTCTGGCGATAGAG+GGG + chr4_1:32846405-32846424 None:intergenic 55.0%
CGCAGTTGTCTGGCGATAGA+GGG + chr4_1:32846406-32846425 None:intergenic 55.0%
TCGCAGTTGTCTGGCGATAG+AGG + chr4_1:32846407-32846426 None:intergenic 55.0%
TCTTCCGCTGAATTCTGGCC+AGG + chr4_1:32846795-32846814 None:intergenic 55.0%
TGGCCTCCAAATCCCACCTT+TGG + chr4_1:32847228-32847247 None:intergenic 55.0%
TGCAAGGCGGTCTGCTTTCA+GGG + chr4_1:32847486-32847505 None:intergenic 55.0%
TTGCAAGGCGGTCTGCTTTC+AGG + chr4_1:32847487-32847506 None:intergenic 55.0%
CAAGTTCCTCTGGCTGGTAG+TGG + chr4_1:32847531-32847550 None:intergenic 55.0%
GCTTGACAAGTTCCTCTGGC+TGG + chr4_1:32847537-32847556 None:intergenic 55.0%
!! GACAATGGAAGTGCTTGCGG+TGG - chr4_1:32847917-32847936 Msa0544410:intron 55.0%
GGGCTAAGGGTTTCCGCCAT+TGG + chr4_1:32844101-32844120 None:intergenic 60.0%
GGCAACAGGGAGACGGAGTT+TGG + chr4_1:32844126-32844145 None:intergenic 60.0%
ACTGGATGCGTGCGGCAACA+GGG + chr4_1:32844139-32844158 None:intergenic 60.0%
CCCACCAGCCCCTTCATCTT+AGG - chr4_1:32844161-32844180 Msa0544410:three_prime_UTR 60.0%
GCGTTCGAGCTGGTCATCGT+TGG + chr4_1:32844189-32844208 None:intergenic 60.0%
ACTGCTGAAGGCAGCTCGCA+TGG + chr4_1:32844965-32844984 None:intergenic 60.0%
ATGCGAGCTGCCTTCAGCAG+TGG - chr4_1:32844964-32844983 Msa0544410:CDS 60.0%
TCATGCTTCCGCGTCTGCGT+CGG + chr4_1:32845168-32845187 None:intergenic 60.0%
GCAGGCAAGCTGCACTCTTG+AGG - chr4_1:32845666-32845685 Msa0544410:intron 60.0%
GCAAGCTGCACTCTTGAGGC+CGG - chr4_1:32845670-32845689 Msa0544410:intron 60.0%
GCAGGCCAAGAAGCTGAGCA+AGG - chr4_1:32845766-32845785 Msa0544410:intron 60.0%
CATGGGCAGGCCCTGATCAT+TGG - chr4_1:32847189-32847208 Msa0544410:intron 60.0%
AAGTGCTTGCGGTGGCGATG+AGG - chr4_1:32847925-32847944 Msa0544410:intron 60.0%
GCAGCGGCATTGCATTCACC+TGG + chr4_1:32848582-32848601 None:intergenic 60.0%
TGCGTGCGGCAACAGGGAGA+CGG + chr4_1:32844133-32844152 None:intergenic 65.0%
GACTGGATGCGTGCGGCAAC+AGG + chr4_1:32844140-32844159 None:intergenic 65.0%
GGTGGGAGACTGGATGCGTG+CGG + chr4_1:32844147-32844166 None:intergenic 65.0%
! TGAAGGGGCTGGTGGGAGAC+TGG + chr4_1:32844157-32844176 None:intergenic 65.0%
GTGCTTGAGCGCGTTCGAGC+TGG + chr4_1:32844199-32844218 None:intergenic 65.0%
AGATGAGGCCGACGCAGACG+CGG - chr4_1:32845157-32845176 Msa0544410:intron 65.0%
!! GGCTGGTAGTGGCAGTCCTC+TGG + chr4_1:32847520-32847539 None:intergenic 65.0%
GGACTGCCACTACCAGCCAG+AGG - chr4_1:32847522-32847541 Msa0544410:intron 65.0%
GCTTGCGGTGGCGATGAGGC+TGG - chr4_1:32847929-32847948 Msa0544410:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 32844005 32849534 32844005 ID=Msa0544410;Name=Msa0544410
chr4_1 mRNA 32844005 32849534 32844005 ID=Msa0544410-mRNA-1;Parent=Msa0544410;Name=Msa0544410-mRNA-1;_AED=0.10;_eAED=0.10;_QI=96|0.91|0.84|1|0.75|0.69|13|323|700
chr4_1 exon 32844005 32844296 32844005 ID=Msa0544410-mRNA-1:exon:8418;Parent=Msa0544410-mRNA-1
chr4_1 exon 32844768 32845005 32844768 ID=Msa0544410-mRNA-1:exon:8417;Parent=Msa0544410-mRNA-1
chr4_1 exon 32845237 32845350 32845237 ID=Msa0544410-mRNA-1:exon:8416;Parent=Msa0544410-mRNA-1
chr4_1 exon 32845521 32845675 32845521 ID=Msa0544410-mRNA-1:exon:8415;Parent=Msa0544410-mRNA-1
chr4_1 exon 32845800 32845830 32845800 ID=Msa0544410-mRNA-1:exon:8414;Parent=Msa0544410-mRNA-1
chr4_1 exon 32845960 32846216 32845960 ID=Msa0544410-mRNA-1:exon:8413;Parent=Msa0544410-mRNA-1
chr4_1 exon 32846309 32846453 32846309 ID=Msa0544410-mRNA-1:exon:8412;Parent=Msa0544410-mRNA-1
chr4_1 exon 32846577 32847154 32846577 ID=Msa0544410-mRNA-1:exon:8411;Parent=Msa0544410-mRNA-1
chr4_1 exon 32847251 32847311 32847251 ID=Msa0544410-mRNA-1:exon:8410;Parent=Msa0544410-mRNA-1
chr4_1 exon 32847391 32847470 32847391 ID=Msa0544410-mRNA-1:exon:8409;Parent=Msa0544410-mRNA-1
chr4_1 exon 32847752 32847869 32847752 ID=Msa0544410-mRNA-1:exon:8408;Parent=Msa0544410-mRNA-1
chr4_1 exon 32848997 32849098 32848997 ID=Msa0544410-mRNA-1:exon:8407;Parent=Msa0544410-mRNA-1
chr4_1 exon 32849184 32849534 32849184 ID=Msa0544410-mRNA-1:exon:8406;Parent=Msa0544410-mRNA-1
chr4_1 five_prime_UTR 32849439 32849534 32849439 ID=Msa0544410-mRNA-1:five_prime_utr;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32849184 32849438 32849184 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32848997 32849098 32848997 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32847752 32847869 32847752 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32847391 32847470 32847391 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32847251 32847311 32847251 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32846577 32847154 32846577 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32846309 32846453 32846309 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32845960 32846216 32845960 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32845800 32845830 32845800 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32845521 32845675 32845521 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32845237 32845350 32845237 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 CDS 32844799 32845005 32844799 ID=Msa0544410-mRNA-1:cds;Parent=Msa0544410-mRNA-1
chr4_1 three_prime_UTR 32844768 32844798 32844768 ID=Msa0544410-mRNA-1:three_prime_utr;Parent=Msa0544410-mRNA-1
chr4_1 three_prime_UTR 32844005 32844296 32844005 ID=Msa0544410-mRNA-1:three_prime_utr;Parent=Msa0544410-mRNA-1
Gene Sequence

>Msa0544410

ATGGCGGAAACCCTTAGCCCTACCAAACTCCGTCTCCCTGTTGCCGCACGCATCCAGTCTCCCACCAGCCCCTTCATCTTAGGTTCCAACGATGACCAGCTCGAACGCGCTCAAGCACGTGCAGCACGCGCCGCTGCAATCCGCCGCAAGAATCTCCCGGTTTCTCAATCTCTCGACGCCGACTCCGATCCGTGTCTTAACAAACAGCAGATCTTCGATTTGTTCCAGAATTGTATAAAGCTCGCCAGCGAAAATAAAATCAATCAGAAAAATACTTGGGAGTTGAACTTGATTGATCATCTTACTGATATTATTAAGGCTGAAGAAGAAAATGATACCGAGACTAATTTTCAGAAGGCAAGCTGCACTCTTGAGGCCGGTGTCAAAATTTATTCACTCAGGGTGGATTCGGTTCATTCTGAGGCATATAAAGTCCTTGGTGGGATGAATAGAGCAGGCCAAGAAGCTGAGCAAGTCATAATGTCAGACACTACACTGGAGGGTGTTAATGTTGAAAATGGACAAGAAGGAAGCAGGAAAGAGACAGATAAAAAGTTGTCACCTTTGTCAACACTGGAATCATCTTTTGAGGTTCTCAATGTAAAGAAGTTTGATGCTGCATTTGTTGTTGATCCCCTCTATCGCCAGACAACTGCGAAATTTGACGAAGGAGGAGCCAAAGGTCTTTTAATGAATAATCTCGGTGTATATGGTGGATGTAGGCTGCTGTTTGATTCACTAGAAGTACCTGCAAAGTGTATGGAAAGCCAAAATGAACCTGATATTTCAGATACCATTGATCTTTCTTTTGCCAGAGGTGTGTTGCTTTGTGAAATATCCGGTGAAACTTCTTGTTACATATGCAAACCGAAACACATTCAATGTGGTGATTTAATTTTCTTTGTAGATTGTGTTGAGGAGATAGTATTAGAGATGCGTGTGAAAGATGAAATTTCTCCAACTCTGAGGACTATAGTAAACCAGTTCGATGAAAATAATAAAAGACCTACTGGTTTTCAACTTCCTGGCCAGAATTCAGCGGAAGAGCTTGATGCCGATTTTAATTGTGAAAATGGCGCTGACGGAGAAGAATATGACAATGGCGCGACCTGGAGTGACGATCATGATGACCAACCAGTCATTGCTGATCTAGGCTCTAATGATGTAGACCCAAGTTTCCCTAGTTATCCTCAGGAAAATGAGCAGTTTCCCTCCACAGACTCTGATATGGATGACAGATTTGAAAATGTTGATGGGTTCTTATTCTTGAGTCTGGGTTTTAATTCAAAACATAATGCATGGGCAGGCCCTGATCATTGGAAGTATAAAAAATCCAAAGTCTCTGAGGTTCAACCTACTTCCGAAGATGGGTCAACCCTGAAACCTAGGCAGACAAAGACTAAGAAACAAGCCGAAGTTGATTTAGATTTCACAAATTCTCTGGAGAAAGACTTGTCTGATATATTTGCTCCTCCGAAGAATCCCAAAACATTACTTCTCCCTGAAAGCAGACCGCCTTGCAACACAAAACTTCCAGAGGACTGCCACTACCAGCCAGAGGAACTTGTCAAGCTATTTCTGCTTCCGGATGTGAAGTGTCTTGGGAGGAGGGCAAAAAGATTCTCAGATGCAGATGGATCTAGAGATCAATTCAACGAGAACGATCCATTCCCTTCTTGGGACAATGGAAGTGCTTGCGGTGGCGATGAGGCTGGTGATTATGAAGGTGATCATCATAGTGACATAGAGGATCCAGGCACTCTTATTACACAGCCACGTCAGGTCAGTAAAATAGAAGTCCAGTATGACAAAACGTCCAAACAGGTTGATGTTCAAGTGCTAAAAGTTACTCTTTGGGACCATGTTCAAGCATCTGTTAAGCTTCCTCCTGTTCAGGGTCAAGAAGAAATAGTATCTTTCAAGAATTTATTGGCTAATTTTCCAGGTGAATGCAATGCCGCTGCAAACATCAGTGACATTTCTCCTCATTTGTGCTTCATATGTCTACTGCATTTGGCAAATGAGAAAGGATTGAGTATCCAAAGCTTCCCCAACTTGGATGATCTTTCAATATGCCTTCCACCTGTTGGTGATACTCATTAA
Protein sequence

>Msa0544410

MAETLSPTKLRLPVAARIQSPTSPFILGSNDDQLERAQARAARAAAIRRKNLPVSQSLDADSDPCLNKQQIFDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEEENDTETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQVIMSDTTLEGVNVENGQEGSRKETDKKLSPLSTLESSFEVLNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRLLFDSLEVPAKCMESQNEPDISDTIDLSFARGVLLCEISGETSCYICKPKHIQCGDLIFFVDCVEEIVLEMRVKDEISPTLRTIVNQFDENNKRPTGFQLPGQNSAEELDADFNCENGADGEEYDNGATWSDDHDDQPVIADLGSNDVDPSFPSYPQENEQFPSTDSDMDDRFENVDGFLFLSLGFNSKHNAWAGPDHWKYKKSKVSEVQPTSEDGSTLKPRQTKTKKQAEVDLDFTNSLEKDLSDIFAPPKNPKTLLLPESRPPCNTKLPEDCHYQPEELVKLFLLPDVKCLGRRAKRFSDADGSRDQFNENDPFPSWDNGSACGGDEAGDYEGDHHSDIEDPGTLITQPRQVSKIEVQYDKTSKQVDVQVLKVTLWDHVQASVKLPPVQGQEEIVSFKNLLANFPGECNAAANISDISPHLCFICLLHLANEKGLSIQSFPNLDDLSICLPPVGDTH*