AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166820


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166820 MtrunA17_Chr7g0267981 93.489 599 10 2 1 570 1 599 0.0 1125
Msa1166820 MtrunA17_Chr7g0225851 56.979 609 101 23 1 570 1 487 0.0 537
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166820 AT3G54750.4 41.503 612 266 9 23 569 5 589 6.54e-147 436
Msa1166820 AT3G54750.1 41.340 612 266 9 23 569 5 588 4.25e-146 434
Msa1166820 AT3G54750.2 41.340 612 266 9 23 569 5 588 4.25e-146 434
Msa1166820 AT3G54750.5 41.436 613 265 10 23 569 5 589 9.67e-145 431
Msa1166820 AT3G54750.3 41.436 613 265 10 23 569 5 589 9.67e-145 431

Find 154 sgRNAs with CRISPR-Local

Find 571 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAACACGCTCTTACAATTT+TGG 0.141532 7_4:-58985490 None:intergenic
TTAAGAAACCAGGATTATTT+AGG 0.170968 7_4:+58977316 Msa1166820:CDS
TTTATGTAGCATTGAAATTA+AGG 0.194384 7_4:+58984285 Msa1166820:CDS
TAATTTAAAATGAAAATAAT+TGG 0.218201 7_4:-58976570 None:intergenic
TCAGCTGTTGATAGATCTTC+TGG 0.224294 7_4:+58977814 Msa1166820:CDS
CGGCTAATAATGGGTCTATT+TGG 0.239647 7_4:+58984224 Msa1166820:CDS
CTGAAAACCAGCAATGATTC+TGG 0.249867 7_4:-58983668 None:intergenic
TTGACCTATTACTGAATTAC+AGG 0.250085 7_4:+58983717 Msa1166820:CDS
GAAGATATTGCGGCTAATAA+TGG 0.271803 7_4:+58984214 Msa1166820:CDS
AGTAGCTACTTTCGCCATTC+AGG 0.272636 7_4:-58976911 None:intergenic
CAAATGACAGAAATCATATT+TGG 0.275720 7_4:-58985542 None:intergenic
GGTAAGCATTTAAATAAATT+AGG 0.288377 7_4:-58985418 None:intergenic
ATTCGAAACGGTGTTTCTAT+TGG 0.298594 7_4:+58976964 Msa1166820:CDS
CTTACCTGTAATTCAGTAAT+AGG 0.301616 7_4:-58983721 None:intergenic
GCAAGTTACAACTGAGGATT+TGG 0.306169 7_4:+58982924 Msa1166820:CDS
GTTTCGAATTCGGTGAGAAC+TGG 0.310383 7_4:-58976950 None:intergenic
AAATAGAATTGGAGTTCTTA+AGG 0.314290 7_4:+58979989 Msa1166820:intron
TAGAAACACCGTTTCGAATT+CGG 0.316399 7_4:-58976960 None:intergenic
ATAAGCATTGCATGAACATT+TGG 0.321160 7_4:-58981657 None:intergenic
TAAGAAACCAGGATTATTTA+GGG 0.327895 7_4:+58977317 Msa1166820:CDS
CAGTGAACATCACAATAAAC+TGG 0.329835 7_4:-58981613 None:intergenic
ACCTGGCAAGAAGGCTCCTT+TGG 0.335017 7_4:+58978088 Msa1166820:CDS
TTACTAGTTTGCTCCATAGA+TGG 0.340079 7_4:-58977544 None:intergenic
GGCATCAATATGATGAAAAT+AGG 0.354374 7_4:-58985397 None:intergenic
ATTCAATCTCCCGCTACGTT+AGG 0.360857 7_4:+58976716 Msa1166820:five_prime_UTR
TACCAAGGATGGTGTGTTGC+AGG 0.368424 7_4:+58977732 Msa1166820:CDS
CTTGGACCGCGTGGTGATAA+TGG 0.369016 7_4:+58977987 Msa1166820:CDS
GAAGACGTAACTGCAGCTTC+TGG 0.379959 7_4:-58985283 None:intergenic
AGCCCATCAATGCACATATA+CGG 0.387724 7_4:-58984336 None:intergenic
CAGCCGTATATGTGCATTGA+TGG 0.392186 7_4:+58984333 Msa1166820:CDS
AAGATATTGCGGCTAATAAT+GGG 0.398168 7_4:+58984215 Msa1166820:CDS
TGTTCAGGAAAATCCATCTA+TGG 0.404540 7_4:+58977531 Msa1166820:intron
AGGGGATACTATTCGCATAC+TGG 0.405603 7_4:-58978126 None:intergenic
TAAGGAAACGGCAAGTGGCT+TGG 0.428810 7_4:+58980007 Msa1166820:CDS
CAGTTTATTGTGATGTTCAC+TGG 0.431777 7_4:+58981614 Msa1166820:CDS
TTCAATCTCCCGCTACGTTA+GGG 0.433085 7_4:+58976717 Msa1166820:five_prime_UTR
CCCGATGGAATCTTAAACCT+CGG 0.436019 7_4:-58977390 None:intergenic
CGCCTGCAACACACCATCCT+TGG 0.438483 7_4:-58977734 None:intergenic
AGAAGGCGGAAGAACAGATT+GGG 0.438610 7_4:-58979835 None:intergenic
TAATAGCCCAGAATCATTGC+TGG 0.440353 7_4:+58983661 Msa1166820:CDS
ATGGGAAGAACCGAGAAAAT+CGG 0.441212 7_4:-58976665 None:intergenic
TTTGCACAAGGATCATTAGA+TGG 0.442251 7_4:+58984259 Msa1166820:CDS
GCAGAACTTTGGAACGGAAC+AGG 0.445768 7_4:-58983902 None:intergenic
AAGGAAACGGCAAGTGGCTT+GGG 0.452290 7_4:+58980008 Msa1166820:CDS
GTGTCTCTGAGGTGGACAAT+AGG 0.452787 7_4:+58977292 Msa1166820:intron
AACTAACTTTGCTGAACCAC+TGG 0.455460 7_4:-58977193 None:intergenic
TGGGAAGAACCGAGAAAATC+GGG 0.459046 7_4:-58976664 None:intergenic
GCCTCTTTGCCGTTCAAAAG+AGG 0.462275 7_4:+58982900 Msa1166820:CDS
AGAGACAGCAAGGGGTTTCA+CGG 0.466552 7_4:+58977605 Msa1166820:CDS
ATGACCTCTATTACATGCTT+CGG 0.466766 7_4:+58980043 Msa1166820:CDS
CCGAGGTTTAAGATTCCATC+GGG 0.467403 7_4:+58977390 Msa1166820:CDS
TTCACTGGTGGCGATGGCTC+TGG 0.470881 7_4:+58981629 Msa1166820:CDS
AATTGGAGTTCTTAAGGAAA+CGG 0.472450 7_4:+58979995 Msa1166820:CDS
CTCAACACTGATATGATAGA+AGG 0.475132 7_4:-58979852 None:intergenic
AATATGATTTCTGTCATTTG+AGG 0.477467 7_4:+58985545 Msa1166820:three_prime_UTR
TGAAAACCAGCAATGATTCT+GGG 0.481029 7_4:-58983667 None:intergenic
TCCAAAGGAGCCTTCTTGCC+AGG 0.481682 7_4:-58978089 None:intergenic
GATAAGTCAGAGCAGAACTT+TGG 0.481909 7_4:-58983913 None:intergenic
CTCTGAAGGGAGGAGCTTTG+AGG 0.485787 7_4:+58984357 Msa1166820:CDS
TAGAAGGCGGAAGAACAGAT+TGG 0.489932 7_4:-58979836 None:intergenic
AGAGAATGACCTTGAGCGCC+GGG 0.492279 7_4:-58983630 None:intergenic
AGTCGTGTATCATTGTATCT+AGG 0.496935 7_4:-58977342 None:intergenic
TTTCGAATTCGGTGAGAACT+GGG 0.497996 7_4:-58976949 None:intergenic
AGCGGTGTCGTATCAGTGAA+TGG 0.499328 7_4:-58976684 None:intergenic
TAACAATGATCTAAAACCTC+TGG 0.503353 7_4:-58981693 None:intergenic
TCCACGTCCATCGGATGAAT+CGG 0.504224 7_4:-58978018 None:intergenic
ATTACAAATACATGACTTGT+GGG 0.509580 7_4:-58985512 None:intergenic
TTGGAGAAATCTGCTACCTC+AGG 0.513340 7_4:+58977703 Msa1166820:CDS
AAATCTGAATCAAAAGCTGC+TGG 0.516205 7_4:+58985220 Msa1166820:CDS
AGAGGAAGAATTTACTGCAA+TGG 0.517278 7_4:-58978054 None:intergenic
TAGTTAATAGTTGATGTATG+TGG 0.518916 7_4:-58985587 None:intergenic
TTGAGAGGACTAGCCTCGCT+TGG 0.519123 7_4:+58977969 Msa1166820:CDS
TGCTGAATCTCCACGTCCAT+CGG 0.520790 7_4:-58978027 None:intergenic
CAAAGCAACATTCAGTCCAC+TGG 0.521488 7_4:-58985182 None:intergenic
CTAGGCGCCCTAAATAATCC+TGG 0.524786 7_4:-58977324 None:intergenic
ATCAACAGCTGAAGAAAGAT+CGG 0.533488 7_4:-58977803 None:intergenic
GAAGAATTTACTGCAATGGT+TGG 0.533738 7_4:-58978050 None:intergenic
GCTGGCAGTGAAAGCTTGCG+AGG 0.536250 7_4:+58985238 Msa1166820:CDS
AGGATACATTTATTCCACCT+TGG 0.536590 7_4:+58984305 Msa1166820:CDS
TCTTTCCTAGATTAAATGCA+TGG 0.539258 7_4:+58984177 Msa1166820:intron
TAAATGCTTACCCTTCCGAT+TGG 0.539310 7_4:+58985429 Msa1166820:three_prime_UTR
CAGAGAATGACCTTGAGCGC+CGG 0.540235 7_4:-58983631 None:intergenic
GTTTAAGATTCCATCGGGGA+AGG 0.546998 7_4:+58977395 Msa1166820:CDS
TCCTCTGAATGTCATATACC+TGG 0.554170 7_4:+58978071 Msa1166820:CDS
GAACTGGGAGGCATAGCACT+TGG 0.555818 7_4:-58976934 None:intergenic
GGAACAGGAGAACACAAGAC+AGG 0.558626 7_4:-58983887 None:intergenic
ATGTGTAAATACCATAAAAG+AGG 0.561034 7_4:-58980080 None:intergenic
GCGGTGTCGTATCAGTGAAT+GGG 0.562441 7_4:-58976683 None:intergenic
TATTTGCAGTGTCTCTGAGG+TGG 0.563464 7_4:+58977284 Msa1166820:intron
GCCGAGGTTTAAGATTCCAT+CGG 0.568404 7_4:+58977389 Msa1166820:CDS
TTCGAAGGAGACCAATCGGA+AGG 0.568594 7_4:-58985440 None:intergenic
TATTACAAATACATGACTTG+TGG 0.570122 7_4:-58985513 None:intergenic
ACCGATTCATCCGATGGACG+TGG 0.572736 7_4:+58978017 Msa1166820:CDS
GTGACTGAACCGGTCTCCAG+TGG 0.576955 7_4:+58985166 Msa1166820:CDS
TGTGCATTGATGGGCTCTGA+AGG 0.577752 7_4:+58984343 Msa1166820:CDS
TGCTTGTTGTAATTCCTGAA+TGG 0.578304 7_4:+58976897 Msa1166820:exon
TCTTCCGAAGCATGTAATAG+AGG 0.579226 7_4:-58980047 None:intergenic
GTGATGTTCACTGGTGGCGA+TGG 0.579761 7_4:+58981623 Msa1166820:CDS
TTATATTTGCAGTGTCTCTG+AGG 0.580757 7_4:+58977281 Msa1166820:intron
ATGTCATATACCTGGCAAGA+AGG 0.580964 7_4:+58978079 Msa1166820:CDS
TTGAGCTCATCAACTGCAGA+AGG 0.583441 7_4:+58979870 Msa1166820:CDS
GCCAGGTATATGACATTCAG+AGG 0.584588 7_4:-58978072 None:intergenic
CGTGACCTCACTGTCTAGTG+TGG 0.586021 7_4:+58983859 Msa1166820:CDS
GACAATAGGTTTAAGAAACC+AGG 0.586658 7_4:+58977306 Msa1166820:CDS
TCAGGAGAGGTTACCAAGGA+TGG 0.588304 7_4:+58977721 Msa1166820:CDS
AGATTGAATTCGACGAAAAG+CGG 0.589352 7_4:-58976702 None:intergenic
AGTGGCAGCAACAATGTGCA+TGG 0.589761 7_4:+58983689 Msa1166820:CDS
ACATTCAGTCCACTGGAGAC+CGG 0.590911 7_4:-58985175 None:intergenic
CATGTAATAGAGGTCATGAA+AGG 0.594277 7_4:-58980037 None:intergenic
AAAAGTGTAAAGTACTGTGA+TGG 0.597080 7_4:+58985325 Msa1166820:CDS
AAGGGAGGAGCTTTGAGGCA+AGG 0.597578 7_4:+58984362 Msa1166820:CDS
AGCCGTATATGTGCATTGAT+GGG 0.598883 7_4:+58984334 Msa1166820:CDS
ATCACCACGCGGTCCAAGCG+AGG 0.599331 7_4:-58977982 None:intergenic
CAAGGATGGTGTGTTGCAGG+CGG 0.599736 7_4:+58977735 Msa1166820:CDS
AAGGATGGTGTGTTGCAGGC+GGG 0.603714 7_4:+58977736 Msa1166820:CDS
ATACATCAACTATTAACTAA+CGG 0.605716 7_4:+58985591 Msa1166820:three_prime_UTR
AGTTCTCACCGAATTCGAAA+CGG 0.607334 7_4:+58976952 Msa1166820:CDS
TGCAGCTTCTGGAATGCCAA+AGG 0.610616 7_4:-58985272 None:intergenic
AAACGTACCCTAAGTTCTGA+AGG 0.611789 7_4:-58977000 None:intergenic
GAGAAGAGCTGAAGATATTG+CGG 0.612061 7_4:+58984204 Msa1166820:CDS
TATATTTCTCAGTCAACCAG+AGG 0.614438 7_4:+58981677 Msa1166820:CDS
ATGCTTCGGAAGAACATATG+TGG 0.616374 7_4:+58980057 Msa1166820:CDS
CATATACGGCTGATAATCCA+AGG 0.618143 7_4:-58984322 None:intergenic
TCGGTGGTTAAGAGACAGCA+AGG 0.620054 7_4:+58977595 Msa1166820:CDS
CGGTGGTTAAGAGACAGCAA+GGG 0.621190 7_4:+58977596 Msa1166820:CDS
TTAGCTACCGATTCATCCGA+TGG 0.624246 7_4:+58978011 Msa1166820:CDS
AAAGATAACGAGTTTGCACA+AGG 0.627297 7_4:+58984247 Msa1166820:CDS
AGCTCATCAACTGCAGAAGG+AGG 0.628000 7_4:+58979873 Msa1166820:CDS
ATCGGGGAAGGAAAATGTGA+AGG 0.629437 7_4:+58977407 Msa1166820:CDS
ATCCTTGGTAACCTCTCCTG+AGG 0.635914 7_4:-58977719 None:intergenic
GAAGGCGGAAGAACAGATTG+GGG 0.643801 7_4:-58979834 None:intergenic
ACTGGATTGAGAACATTCAT+CGG 0.646151 7_4:-58977175 None:intergenic
AGTGAACATCACAATAAACT+GGG 0.650061 7_4:-58981612 None:intergenic
AACACTGATATGATAGAAGG+CGG 0.654535 7_4:-58979849 None:intergenic
GTCAGAGCAGAACTTTGGAA+CGG 0.655766 7_4:-58983908 None:intergenic
TCGAAGGAGACCAATCGGAA+GGG 0.655768 7_4:-58985439 None:intergenic
TTTATTGTGATGTTCACTGG+TGG 0.661733 7_4:+58981617 Msa1166820:CDS
GAAATCTGCTACCTCAGGAG+AGG 0.663455 7_4:+58977708 Msa1166820:CDS
GTTCTTAAGGAAACGGCAAG+TGG 0.664215 7_4:+58980002 Msa1166820:CDS
CATTGATGGGCTCTGAAGGG+AGG 0.664242 7_4:+58984347 Msa1166820:CDS
TGGAGCAGTAAATATTGACA+TGG 0.669718 7_4:+58977834 Msa1166820:CDS
GGTGGTTAAGAGACAGCAAG+GGG 0.670056 7_4:+58977597 Msa1166820:CDS
GATGAATGTTCTCAATCCAG+TGG 0.671105 7_4:+58977177 Msa1166820:CDS
GTGCATTGATGGGCTCTGAA+GGG 0.672288 7_4:+58984344 Msa1166820:CDS
ATTGAAGCGAGAAAGTGTCG+TGG 0.691528 7_4:+58977146 Msa1166820:CDS
TACCTCAGGAGAGGTTACCA+AGG 0.699417 7_4:+58977717 Msa1166820:CDS
AGAGGAGCAAGTTACAACTG+AGG 0.701608 7_4:+58982918 Msa1166820:CDS
CGAATTCGGTGAGAACTGGG+AGG 0.706927 7_4:-58976946 None:intergenic
ATTGAGAACATTCATCGGTG+AGG 0.709288 7_4:-58977170 None:intergenic
TTGAGTGTACCCTAACGTAG+CGG 0.711398 7_4:-58976726 None:intergenic
AACGTCCACACTAGACAGTG+AGG 0.727809 7_4:-58983864 None:intergenic
ATACGGCTGATAATCCAAGG+TGG 0.770014 7_4:-58984319 None:intergenic
CGAGGTTTAAGATTCCATCG+GGG 0.798890 7_4:+58977391 Msa1166820:CDS
GCTAATCCATTATCACCACG+CGG 0.807615 7_4:-58977993 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAAAATAATTAAGAAG+CGG - chr7_4:58977226-58977245 None:intergenic 10.0%
!!! AAAAAAATCTTTTTTATAGT+TGG - chr7_4:58978242-58978261 None:intergenic 10.0%
!!! AAAATTTTACAAAAAAAAAG+TGG + chr7_4:58978374-58978393 Msa1166820:intron 10.0%
!! ATAATCATAAACAAATTAAA+TGG - chr7_4:58978605-58978624 None:intergenic 10.0%
!!! ATAATTTTTATTGTTGAAAA+AGG + chr7_4:58978632-58978651 Msa1166820:intron 10.0%
!! ATTGATATATTTATTTGTAT+TGG - chr7_4:58978695-58978714 None:intergenic 10.0%
!! TATTTAATAAAAAGGAAAAA+TGG - chr7_4:58979974-58979993 None:intergenic 10.0%
!! TTAATTTAATTATTAACACA+AGG - chr7_4:58981124-58981143 None:intergenic 10.0%
!!! ATTTTCATCATAATAATAAA+CGG - chr7_4:58981405-58981424 None:intergenic 10.0%
!!! ATTTTAGTAATAGAAAAAAT+GGG - chr7_4:58984600-58984619 None:intergenic 10.0%
!!! AATTTTAGTAATAGAAAAAA+TGG - chr7_4:58984601-58984620 None:intergenic 10.0%
!!! TTTTTCTATTACTAAAATTT+CGG + chr7_4:58984602-58984621 Msa1166820:intron 10.0%
!!! CCTAAAAAATTATAATTTGT+GGG - chr7_4:58978311-58978330 None:intergenic 15.0%
!! ACCTAAAAAATTATAATTTG+TGG - chr7_4:58978312-58978331 None:intergenic 15.0%
!! TAATCTCTAACAAAAAATTA+AGG + chr7_4:58978412-58978431 Msa1166820:intron 15.0%
!!! TTTTTGCAACTAAATTTATT+TGG + chr7_4:58978751-58978770 Msa1166820:intron 15.0%
!!! TTTTGCAACTAAATTTATTT+GGG + chr7_4:58978752-58978771 Msa1166820:intron 15.0%
!! AAAAAATATTATTCATGAAG+TGG - chr7_4:58978827-58978846 None:intergenic 15.0%
!!! CATGAATAATATTTTTTTTG+AGG + chr7_4:58978830-58978849 Msa1166820:intron 15.0%
!!! AATTAAATGATCTTTTATAC+AGG - chr7_4:58979011-58979030 None:intergenic 15.0%
!! AACAAATCAAATAAATAAGA+GGG - chr7_4:58979600-58979619 None:intergenic 15.0%
!! AAACAAATCAAATAAATAAG+AGG - chr7_4:58979601-58979620 None:intergenic 15.0%
!!! TCCTTTTTATTAAATAGAAT+TGG + chr7_4:58979978-58979997 Msa1166820:intron 15.0%
!! TCCAATTCTATTTAATAAAA+AGG - chr7_4:58979982-58980001 None:intergenic 15.0%
!! AAATGTTTGACTAATAAATT+GGG - chr7_4:58980272-58980291 None:intergenic 15.0%
!! AAAATGTTTGACTAATAAAT+TGG - chr7_4:58980273-58980292 None:intergenic 15.0%
!!! TTGAAAGTTTCTAAAATTTA+AGG - chr7_4:58980406-58980425 None:intergenic 15.0%
!!! TTTTCATCATAATAATAAAC+GGG - chr7_4:58981404-58981423 None:intergenic 15.0%
!!! TAATCATATTTTTTCATTGA+TGG + chr7_4:58981862-58981881 Msa1166820:intron 15.0%
!!! AAAATGTAGTTTTTACAAAT+CGG + chr7_4:58982124-58982143 Msa1166820:intron 15.0%
!! AGTTAATACTAATACTAATT+AGG - chr7_4:58983221-58983240 None:intergenic 15.0%
!! TTAGTATTAACTGAATTATT+TGG + chr7_4:58983229-58983248 Msa1166820:intron 15.0%
!! AACAACATATAATTAAAAGA+TGG - chr7_4:58983287-58983306 None:intergenic 15.0%
!! ATATAAATAGAGCTTAAATA+TGG - chr7_4:58983569-58983588 None:intergenic 15.0%
!! ATATTTAAGCTCTATTTATA+TGG + chr7_4:58983568-58983587 Msa1166820:intron 15.0%
!!! ATTGATTTATGTTTTTCATT+TGG + chr7_4:58983596-58983615 Msa1166820:intron 15.0%
!! TTATTTAAATTGACAAATTG+CGG - chr7_4:58984009-58984028 None:intergenic 15.0%
!! TAAAATGTAATTGTTTAGAT+AGG + chr7_4:58984423-58984442 Msa1166820:intron 15.0%
!!! GGTTTATTGAATTTTATTTT+AGG + chr7_4:58984521-58984540 Msa1166820:intron 15.0%
!!! TTTTAGTAATAGAAAAAATG+GGG - chr7_4:58984599-58984618 None:intergenic 15.0%
!!! TTTTCTATTACTAAAATTTC+GGG + chr7_4:58984603-58984622 Msa1166820:intron 15.0%
!! TGTATTATTACAAATAAAGA+TGG + chr7_4:58984743-58984762 Msa1166820:intron 15.0%
!! GTATTATTACAAATAAAGAT+GGG + chr7_4:58984744-58984763 Msa1166820:intron 15.0%
!!! TTATAACTGCATTTTAACTT+AGG + chr7_4:58977034-58977053 Msa1166820:intron 20.0%
!!! TATAACTGCATTTTAACTTA+GGG + chr7_4:58977035-58977054 Msa1166820:intron 20.0%
!!! CCCACAAATTATAATTTTTT+AGG + chr7_4:58978308-58978327 Msa1166820:intron 20.0%
!! TAAAAAACTGAGACAAAAAT+TGG - chr7_4:58978355-58978374 None:intergenic 20.0%
!! GACTAAAATTAACAAATCTT+AGG + chr7_4:58978434-58978453 Msa1166820:intron 20.0%
!! AGACAATTATTGATGTAATT+GGG - chr7_4:58978514-58978533 None:intergenic 20.0%
!! TAGCTCAATGTTTATTATTT+AGG + chr7_4:58978776-58978795 Msa1166820:intron 20.0%
!! AGCTCAATGTTTATTATTTA+GGG + chr7_4:58978777-58978796 Msa1166820:intron 20.0%
!!! ATAAGTGTTTTTATTTGCTT+AGG - chr7_4:58978920-58978939 None:intergenic 20.0%
!!! ATTCTGAAATAACATGAAAT+TGG - chr7_4:58979250-58979269 None:intergenic 20.0%
!! ATATGAATGAATTGTTATGT+GGG - chr7_4:58979518-58979537 None:intergenic 20.0%
!! ATTTCATACTCCTAATTTAT+AGG + chr7_4:58980227-58980246 Msa1166820:intron 20.0%
!! AATGTTTGACTAATAAATTG+GGG - chr7_4:58980271-58980290 None:intergenic 20.0%
!!! GTTTCTAAAATTTAAGGTTT+GGG - chr7_4:58980400-58980419 None:intergenic 20.0%
!!! AGTTTCTAAAATTTAAGGTT+TGG - chr7_4:58980401-58980420 None:intergenic 20.0%
!! TGGATAGTTATTAGTAATTT+AGG + chr7_4:58980921-58980940 Msa1166820:intron 20.0%
!!! ATATGAGACTTTAAGATATA+TGG + chr7_4:58981192-58981211 Msa1166820:intron 20.0%
!! TTATCTGAAAAAATTGTAGT+AGG + chr7_4:58981922-58981941 Msa1166820:intron 20.0%
!! AAATCGTTAACTCATTAATT+CGG + chr7_4:58982365-58982384 Msa1166820:intron 20.0%
!!! CATATCATTTGTTTTTTTGA+TGG + chr7_4:58983007-58983026 Msa1166820:intron 20.0%
!!! TTTTTTTTTGACAAGTATAC+TGG + chr7_4:58983378-58983397 Msa1166820:intron 20.0%
!! ATTATTAAATGAGCTAGAAA+AGG - chr7_4:58984109-58984128 None:intergenic 20.0%
!! AAAAATATCAACATAGAAAG+TGG - chr7_4:58984151-58984170 None:intergenic 20.0%
!!! TTTATGTAGCATTGAAATTA+AGG + chr7_4:58984285-58984304 Msa1166820:CDS 20.0%
!! AATATGTGATTAAGAAAACT+TGG + chr7_4:58984485-58984504 Msa1166820:intron 20.0%
!! ATATGTGATTAAGAAAACTT+GGG + chr7_4:58984486-58984505 Msa1166820:intron 20.0%
!! ATATATTATTTACCTGGAAA+TGG + chr7_4:58984568-58984587 Msa1166820:intron 20.0%
!! TTTCTATTACTAAAATTTCG+GGG + chr7_4:58984604-58984623 Msa1166820:intron 20.0%
!! GGTAAGCATTTAAATAAATT+AGG - chr7_4:58985421-58985440 None:intergenic 20.0%
!! ATACATCAACTATTAACTAA+CGG + chr7_4:58985591-58985610 Msa1166820:three_prime_UTR 20.0%
! TTAAGAAACCAGGATTATTT+AGG + chr7_4:58977316-58977335 Msa1166820:CDS 25.0%
! TAAGAAACCAGGATTATTTA+GGG + chr7_4:58977317-58977336 Msa1166820:CDS 25.0%
! AAGTAAACAAATATTAGTCG+TGG - chr7_4:58977451-58977470 None:intergenic 25.0%
! CATAGTAACAATATCAATCT+TGG - chr7_4:58977513-58977532 None:intergenic 25.0%
! TTGATATTGTTACTATGTTC+AGG + chr7_4:58977516-58977535 Msa1166820:intron 25.0%
! ATAAACTATGAAGAAAAGGT+TGG - chr7_4:58977875-58977894 None:intergenic 25.0%
! GAAGATAAACTATGAAGAAA+AGG - chr7_4:58977879-58977898 None:intergenic 25.0%
!!! TGCTGAAAAAAACGTTTTTT+AGG + chr7_4:58977938-58977957 Msa1166820:intron 25.0%
!!! GCTGAAAAAAACGTTTTTTA+GGG + chr7_4:58977939-58977958 Msa1166820:intron 25.0%
!!! GTTTTTAAAGTAAGATCCAA+AGG - chr7_4:58978107-58978126 None:intergenic 25.0%
! CCAATATATTAGTCAATCAA+AGG - chr7_4:58978173-58978192 None:intergenic 25.0%
! CCTTTGATTGACTAATATAT+TGG + chr7_4:58978170-58978189 Msa1166820:intron 25.0%
! CAGACAATTATTGATGTAAT+TGG - chr7_4:58978515-58978534 None:intergenic 25.0%
!!! TTGTATTGGTTTGATACTTT+CGG - chr7_4:58978681-58978700 None:intergenic 25.0%
! AATATTATTCATGAAGTGGT+CGG - chr7_4:58978823-58978842 None:intergenic 25.0%
!! TATCTATTTTATAGATGCAC+TGG + chr7_4:58979107-58979126 Msa1166820:intron 25.0%
! ACTTGATAAACATAACAGTT+AGG + chr7_4:58979137-58979156 Msa1166820:intron 25.0%
!! CAATTGATAATACAAACAAG+GGG - chr7_4:58979173-58979192 None:intergenic 25.0%
!! CCAATTGATAATACAAACAA+GGG - chr7_4:58979174-58979193 None:intergenic 25.0%
!! CCTTGTTTGTATTATCAATT+GGG + chr7_4:58979172-58979191 Msa1166820:intron 25.0%
! CATATGAATGAATTGTTATG+TGG - chr7_4:58979519-58979538 None:intergenic 25.0%
! TACATAACACAAAAACAGTA+GGG - chr7_4:58979568-58979587 None:intergenic 25.0%
! AAATCAAATAAATAAGAGGG+TGG - chr7_4:58979597-58979616 None:intergenic 25.0%
! AACATATGTATCGTAGAATT+AGG - chr7_4:58979708-58979727 None:intergenic 25.0%
! ATACATATGTTAGTTATGTG+TGG + chr7_4:58979717-58979736 Msa1166820:intron 25.0%
! AACATAAGGAAAATAGAGAA+AGG - chr7_4:58979951-58979970 None:intergenic 25.0%
! AAAAGGAAAAATGGAACATA+AGG - chr7_4:58979965-58979984 None:intergenic 25.0%
! AAATAGAATTGGAGTTCTTA+AGG + chr7_4:58979989-58980008 Msa1166820:intron 25.0%
! ATGTGTAAATACCATAAAAG+AGG - chr7_4:58980083-58980102 None:intergenic 25.0%
! TGCAACTAAACCTATAAATT+AGG - chr7_4:58980240-58980259 None:intergenic 25.0%
! TAATGAAGGGATTAAACTTT+GGG - chr7_4:58980458-58980477 None:intergenic 25.0%
! TTAATGAAGGGATTAAACTT+TGG - chr7_4:58980459-58980478 None:intergenic 25.0%
!! ATTTTGTTAGATAGAAGAGA+AGG + chr7_4:58980629-58980648 Msa1166820:intron 25.0%
! ATATAGGATTGGAGATTATT+TGG + chr7_4:58980901-58980920 Msa1166820:intron 25.0%
! AACCTAAAGAATATCAAACA+GGG + chr7_4:58981070-58981089 Msa1166820:intron 25.0%
! TTAATTATTAACACAAGGCA+GGG - chr7_4:58981119-58981138 None:intergenic 25.0%
! TTTAATTATTAACACAAGGC+AGG - chr7_4:58981120-58981139 None:intergenic 25.0%
! AACAGTGAAATTATATCAGA+TGG + chr7_4:58981279-58981298 Msa1166820:intron 25.0%
! ACAGTGAAATTATATCAGAT+GGG + chr7_4:58981280-58981299 Msa1166820:intron 25.0%
! AATGCTTAATCTAATACTCT+AGG + chr7_4:58981330-58981349 Msa1166820:intron 25.0%
!! GTGCTACTAAACTTATAAAT+CGG + chr7_4:58981360-58981379 Msa1166820:intron 25.0%
! TGCTACTAAACTTATAAATC+GGG + chr7_4:58981361-58981380 Msa1166820:intron 25.0%
! GATTTAGCAATAAAAGAAAC+AGG - chr7_4:58981431-58981450 None:intergenic 25.0%
! GAAAAAATATGATTATCCTG+AGG - chr7_4:58981857-58981876 None:intergenic 25.0%
!!! GGAGTATTTTCATAGAAATA+TGG - chr7_4:58981888-58981907 None:intergenic 25.0%
! TTTGTGATTAAAAATGTCAG+TGG - chr7_4:58982107-58982126 None:intergenic 25.0%
! TGAAAATCATCATAGAATCA+AGG - chr7_4:58982299-58982318 None:intergenic 25.0%
! AATCGTTAACTCATTAATTC+GGG + chr7_4:58982366-58982385 Msa1166820:intron 25.0%
! GAAATATAACCACAAAAAAC+TGG - chr7_4:58982567-58982586 None:intergenic 25.0%
! ATTTAGCCAGATTAAACAAA+TGG + chr7_4:58982590-58982609 Msa1166820:intron 25.0%
! AAATGTCCATTTGTTTAATC+TGG - chr7_4:58982599-58982618 None:intergenic 25.0%
!! GATTAAACAAATGGACATTT+TGG + chr7_4:58982599-58982618 Msa1166820:intron 25.0%
! GATTGTACTTAAAATTGTGA+GGG - chr7_4:58982755-58982774 None:intergenic 25.0%
! AGATTGTACTTAAAATTGTG+AGG - chr7_4:58982756-58982775 None:intergenic 25.0%
! TTATCAAAAGAAGCAAAAAG+AGG - chr7_4:58983159-58983178 None:intergenic 25.0%
!! TCATATATTAAGAGTGTGTT+AGG - chr7_4:58983334-58983353 None:intergenic 25.0%
! TAGAAAAGGAAAAACAACTA+TGG - chr7_4:58984095-58984114 None:intergenic 25.0%
! CTCACTATATATTATTTACC+TGG + chr7_4:58984562-58984581 Msa1166820:intron 25.0%
! ACCTCATAAATTTAGTAGTA+CGG + chr7_4:58984783-58984802 Msa1166820:intron 25.0%
!!! TTTTTTGAATAAGAGTGTTG+AGG + chr7_4:58984812-58984831 Msa1166820:intron 25.0%
!! TTTTAGTGTACATGAACATA+GGG - chr7_4:58985308-58985327 None:intergenic 25.0%
!!! TTTTTAGTGTACATGAACAT+AGG - chr7_4:58985309-58985328 None:intergenic 25.0%
!! TGTTTTCATGAGATTATACA+GGG - chr7_4:58985372-58985391 None:intergenic 25.0%
!! TTGTTTTCATGAGATTATAC+AGG - chr7_4:58985373-58985392 None:intergenic 25.0%
!!! TACCTGTTTTTAATTTTCGA+AGG - chr7_4:58985458-58985477 None:intergenic 25.0%
!! ATTACAAATACATGACTTGT+GGG - chr7_4:58985515-58985534 None:intergenic 25.0%
! TATTACAAATACATGACTTG+TGG - chr7_4:58985516-58985535 None:intergenic 25.0%
! CAAATGACAGAAATCATATT+TGG - chr7_4:58985545-58985564 None:intergenic 25.0%
!! AATATGATTTCTGTCATTTG+AGG + chr7_4:58985545-58985564 Msa1166820:three_prime_UTR 25.0%
!! TAGTTAATAGTTGATGTATG+TGG - chr7_4:58985590-58985609 None:intergenic 25.0%
AAAAACACCTTCAGAACTTA+GGG + chr7_4:58976993-58977012 Msa1166820:CDS 30.0%
! TCATCTTCGATGTTTTATAC+TGG + chr7_4:58977112-58977131 Msa1166820:intron 30.0%
GAATTAGCAGCAAATTGAAA+CGG - chr7_4:58977250-58977269 None:intergenic 30.0%
!!! TGCTTCCATTTTTTCTACTT+CGG + chr7_4:58977576-58977595 Msa1166820:CDS 30.0%
!! AACAAAAGCATCATCAACAT+AGG - chr7_4:58977677-58977696 None:intergenic 30.0%
CTTCATATCAGATGTTTACT+AGG + chr7_4:58977895-58977914 Msa1166820:intron 30.0%
ACTAGGATGTATCATGAATA+TGG + chr7_4:58977912-58977931 Msa1166820:intron 30.0%
AAATCGCTATTTAGAAACGT+TGG + chr7_4:58978469-58978488 Msa1166820:intron 30.0%
AATCGCTATTTAGAAACGTT+GGG + chr7_4:58978470-58978489 Msa1166820:intron 30.0%
! TGTTTATTATTTAGGGTAGC+TGG + chr7_4:58978784-58978803 Msa1166820:intron 30.0%
!!! TATTTTTTTTGAGGTAGCCA+AGG + chr7_4:58978839-58978858 Msa1166820:intron 30.0%
! GTTTAAAATAGCAAATAGCG+TGG + chr7_4:58978962-58978981 Msa1166820:intron 30.0%
!! ACTTGTTACACAAAGTGTTT+TGG + chr7_4:58979079-58979098 Msa1166820:intron 30.0%
! CCCTTGTTTGTATTATCAAT+TGG + chr7_4:58979171-58979190 Msa1166820:intron 30.0%
! CCCAATTGATAATACAAACA+AGG - chr7_4:58979175-58979194 None:intergenic 30.0%
! TCTTTTTCTATCATCCTAAC+AGG + chr7_4:58979445-58979464 Msa1166820:intron 30.0%
AAAAAGTCATGTATCCTGTT+AGG - chr7_4:58979462-58979481 None:intergenic 30.0%
CTACATAACACAAAAACAGT+AGG - chr7_4:58979569-58979588 None:intergenic 30.0%
! CTCATATTTTCATTCCTGTA+AGG - chr7_4:58979774-58979793 None:intergenic 30.0%
AATTGGAGTTCTTAAGGAAA+CGG + chr7_4:58979995-58980014 Msa1166820:CDS 30.0%
TCCATCTGACAAAAAAGTAA+CGG - chr7_4:58980108-58980127 None:intergenic 30.0%
! TTTTTCCACTAAAAGATGTC+AGG + chr7_4:58980333-58980352 Msa1166820:intron 30.0%
TGTGCTTCATATTTAGTATG+TGG - chr7_4:58980432-58980451 None:intergenic 30.0%
ATCCCTTCATTAATGAAAGA+TGG + chr7_4:58980466-58980485 Msa1166820:intron 30.0%
TCCCTTCATTAATGAAAGAT+GGG + chr7_4:58980467-58980486 Msa1166820:intron 30.0%
TCCCATCTTTCATTAATGAA+GGG - chr7_4:58980471-58980490 None:intergenic 30.0%
TAACTAGTCATTGGATACAA+GGG - chr7_4:58980527-58980546 None:intergenic 30.0%
ATAACTAGTCATTGGATACA+AGG - chr7_4:58980528-58980547 None:intergenic 30.0%
TTAGAATGTGACTGACAATT+AGG - chr7_4:58980668-58980687 None:intergenic 30.0%
CTGAAATTGCTAGAATTGTA+TGG + chr7_4:58980827-58980846 Msa1166820:intron 30.0%
TCCAATCCTATATACAGATA+AGG - chr7_4:58980894-58980913 None:intergenic 30.0%
CTGTTTGATATTCTTTAGGT+TGG - chr7_4:58981071-58981090 None:intergenic 30.0%
CAACCTAAAGAATATCAAAC+AGG + chr7_4:58981069-58981088 Msa1166820:intron 30.0%
TAATTATTAACACAAGGCAG+GGG - chr7_4:58981118-58981137 None:intergenic 30.0%
TGTATTCTTAAGTAGTACAC+AGG + chr7_4:58981169-58981188 Msa1166820:intron 30.0%
! CTTAATCTAATACTCTAGGA+TGG + chr7_4:58981334-58981353 Msa1166820:intron 30.0%
GCTACTAAACTTATAAATCG+GGG + chr7_4:58981362-58981381 Msa1166820:intron 30.0%
ATCTGCATTTATAACACCAA+AGG - chr7_4:58981462-58981481 None:intergenic 30.0%
GTAGAAATGCACAAAGAAAT+TGG - chr7_4:58981509-58981528 None:intergenic 30.0%
AGTGAACATCACAATAAACT+GGG - chr7_4:58981615-58981634 None:intergenic 30.0%
! ATAAGCATTGCATGAACATT+TGG - chr7_4:58981660-58981679 None:intergenic 30.0%
! TAACAATGATCTAAAACCTC+TGG - chr7_4:58981696-58981715 None:intergenic 30.0%
CAGATAAATAATTGACCAGA+GGG - chr7_4:58981909-58981928 None:intergenic 30.0%
TCAGATAAATAATTGACCAG+AGG - chr7_4:58981910-58981929 None:intergenic 30.0%
!! TGAGAGTTTTTCAATAGATC+CGG + chr7_4:58982034-58982053 Msa1166820:intron 30.0%
!!! AGAAATGCGTACGATTTTTT+AGG + chr7_4:58982195-58982214 Msa1166820:intron 30.0%
!!! GAAATGCGTACGATTTTTTA+GGG + chr7_4:58982196-58982215 Msa1166820:intron 30.0%
CAAAACTGTGATTCAAATAG+CGG + chr7_4:58982270-58982289 Msa1166820:intron 30.0%
TTCAAATTCCAAACATTGCA+AGG - chr7_4:58982462-58982481 None:intergenic 30.0%
CATATCTCTTTCTCTTCAAT+GGG - chr7_4:58982493-58982512 None:intergenic 30.0%
CATTCGTTTACAACGTATAT+AGG - chr7_4:58982625-58982644 None:intergenic 30.0%
CTATATACGTTGTAAACGAA+TGG + chr7_4:58982623-58982642 Msa1166820:intron 30.0%
AAATTGTGAGGGATAAATTG+TGG - chr7_4:58982744-58982763 None:intergenic 30.0%
TAGTATATAAAGCCACATGA+AGG - chr7_4:58982791-58982810 None:intergenic 30.0%
ACTTTCATTGATGCATACTT+TGG + chr7_4:58982816-58982835 Msa1166820:intron 30.0%
! GAGTGATAAACTTTAAAAGC+AGG - chr7_4:58983536-58983555 None:intergenic 30.0%
TTGACCTATTACTGAATTAC+AGG + chr7_4:58983717-58983736 Msa1166820:CDS 30.0%
CTTACCTGTAATTCAGTAAT+AGG - chr7_4:58983724-58983743 None:intergenic 30.0%
ACAGAAGGAAAACAAAGTTA+AGG - chr7_4:58983964-58983983 None:intergenic 30.0%
ACATGGGAAAAATAAACAGA+AGG - chr7_4:58983979-58983998 None:intergenic 30.0%
AAATTGCGGAAAAACAACAT+GGG - chr7_4:58983995-58984014 None:intergenic 30.0%
TGCATTTAATCTAGGAAAGA+GGG - chr7_4:58984177-58984196 None:intergenic 30.0%
ATGCATTTAATCTAGGAAAG+AGG - chr7_4:58984178-58984197 None:intergenic 30.0%
TCTTTCCTAGATTAAATGCA+TGG + chr7_4:58984177-58984196 Msa1166820:intron 30.0%
AAGATATTGCGGCTAATAAT+GGG + chr7_4:58984215-58984234 Msa1166820:CDS 30.0%
!! AAACTTGGGTATGTTTTTGA+AGG + chr7_4:58984500-58984519 Msa1166820:intron 30.0%
TAGTAATAGAAAAAATGGGG+AGG - chr7_4:58984596-58984615 None:intergenic 30.0%
TGAGATTTATAGAGAATAGC+TGG + chr7_4:58984632-58984651 Msa1166820:intron 30.0%
TTACAAATAAAGATGGGTCT+TGG + chr7_4:58984750-58984769 Msa1166820:intron 30.0%
CCTCATAAATTTAGTAGTAC+GGG + chr7_4:58984784-58984803 Msa1166820:intron 30.0%
AAAGGATATGCTCATTGTAT+TGG - chr7_4:58984964-58984983 None:intergenic 30.0%
!!! CGATTCCAGTTTTAATTCAA+TGG - chr7_4:58985086-58985105 None:intergenic 30.0%
!! AAAAGTGTAAAGTACTGTGA+TGG + chr7_4:58985325-58985344 Msa1166820:CDS 30.0%
! GTTTTCATGAGATTATACAG+GGG - chr7_4:58985371-58985390 None:intergenic 30.0%
GGCATCAATATGATGAAAAT+AGG - chr7_4:58985400-58985419 None:intergenic 30.0%
CTCCTTCGAAAATTAAAAAC+AGG + chr7_4:58985453-58985472 Msa1166820:three_prime_UTR 30.0%
! TCACTTTATCCCGATTTTCT+CGG + chr7_4:58976655-58976674 Msa1166820:five_prime_UTR 35.0%
AGATTGAATTCGACGAAAAG+CGG - chr7_4:58976705-58976724 None:intergenic 35.0%
!! TGCTTGTTGTAATTCCTGAA+TGG + chr7_4:58976897-58976916 Msa1166820:exon 35.0%
TAGAAACACCGTTTCGAATT+CGG - chr7_4:58976963-58976982 None:intergenic 35.0%
! ATTCGAAACGGTGTTTCTAT+TGG + chr7_4:58976964-58976983 Msa1166820:CDS 35.0%
GAAAAACACCTTCAGAACTT+AGG + chr7_4:58976992-58977011 Msa1166820:CDS 35.0%
!!! CTGCATTTTAACTTAGGGTT+AGG + chr7_4:58977040-58977059 Msa1166820:intron 35.0%
TCTTCAATTGAAATGTGACG+CGG + chr7_4:58977082-58977101 Msa1166820:intron 35.0%
! TTCGATGTTTTATACTGGCA+GGG + chr7_4:58977117-58977136 Msa1166820:intron 35.0%
ACTGGATTGAGAACATTCAT+CGG - chr7_4:58977178-58977197 None:intergenic 35.0%
TTATATTTGCAGTGTCTCTG+AGG + chr7_4:58977281-58977300 Msa1166820:intron 35.0%
GACAATAGGTTTAAGAAACC+AGG + chr7_4:58977306-58977325 Msa1166820:CDS 35.0%
AGTCGTGTATCATTGTATCT+AGG - chr7_4:58977345-58977364 None:intergenic 35.0%
! AATCTTAAACCTCGGCTTTT+TGG - chr7_4:58977385-58977404 None:intergenic 35.0%
TGTTCAGGAAAATCCATCTA+TGG + chr7_4:58977531-58977550 Msa1166820:intron 35.0%
!! TTACTAGTTTGCTCCATAGA+TGG - chr7_4:58977547-58977566 None:intergenic 35.0%
!!! TTCCATTTTTTCTACTTCGG+TGG + chr7_4:58977579-58977598 Msa1166820:CDS 35.0%
AACCACCGAAGTAGAAAAAA+TGG - chr7_4:58977584-58977603 None:intergenic 35.0%
TTGTGATCAAGCAAACAAGT+AGG - chr7_4:58977643-58977662 None:intergenic 35.0%
ACAAATGAAAAATGCAGCGA+AGG + chr7_4:58977763-58977782 Msa1166820:CDS 35.0%
ATCAACAGCTGAAGAAAGAT+CGG - chr7_4:58977806-58977825 None:intergenic 35.0%
TGGAGCAGTAAATATTGACA+TGG + chr7_4:58977834-58977853 Msa1166820:CDS 35.0%
!!! TTTTAGGGAAAAGCATTGAG+AGG + chr7_4:58977954-58977973 Msa1166820:intron 35.0%
GAAGAATTTACTGCAATGGT+TGG - chr7_4:58978053-58978072 None:intergenic 35.0%
AGAGGAAGAATTTACTGCAA+TGG - chr7_4:58978057-58978076 None:intergenic 35.0%
TAATATATTGGCATCAAGCC+CGG + chr7_4:58978182-58978201 Msa1166820:intron 35.0%
AGCTCGCAAAAAATTTATGC+AGG + chr7_4:58978214-58978233 Msa1166820:intron 35.0%
GCTCGCAAAAAATTTATGCA+GGG + chr7_4:58978215-58978234 Msa1166820:intron 35.0%
CTCGCAAAAAATTTATGCAG+GGG + chr7_4:58978216-58978235 Msa1166820:intron 35.0%
AACAAGTACAACGTTTGGTA+AGG - chr7_4:58979066-58979085 None:intergenic 35.0%
TGTGTAACAAGTACAACGTT+TGG - chr7_4:58979071-58979090 None:intergenic 35.0%
GATAATACAAACAAGGGGAT+GGG - chr7_4:58979168-58979187 None:intergenic 35.0%
TGATAATACAAACAAGGGGA+TGG - chr7_4:58979169-58979188 None:intergenic 35.0%
AACACAAAAGCCATTGTGTT+GGG + chr7_4:58979209-58979228 Msa1166820:intron 35.0%
!! TTTTCAGCATTGAATGAGTG+CGG + chr7_4:58979402-58979421 Msa1166820:intron 35.0%
! ATATGCATTGACACACAAAC+AGG + chr7_4:58979534-58979553 Msa1166820:intron 35.0%
TGAAAATATGAGAAGTTCCC+AGG + chr7_4:58979782-58979801 Msa1166820:intron 35.0%
GAAAATATGAGAAGTTCCCA+GGG + chr7_4:58979783-58979802 Msa1166820:intron 35.0%
! GCTTCAAAGTTTTGCATTCA+TGG + chr7_4:58979805-58979824 Msa1166820:CDS 35.0%
AACACTGATATGATAGAAGG+CGG - chr7_4:58979852-58979871 None:intergenic 35.0%
CTCAACACTGATATGATAGA+AGG - chr7_4:58979855-58979874 None:intergenic 35.0%
TAAATGAGTCAAGTCAGAAG+GGG - chr7_4:58979907-58979926 None:intergenic 35.0%
GTAAATGAGTCAAGTCAGAA+GGG - chr7_4:58979908-58979927 None:intergenic 35.0%
TGTAAATGAGTCAAGTCAGA+AGG - chr7_4:58979909-58979928 None:intergenic 35.0%
CATGTAATAGAGGTCATGAA+AGG - chr7_4:58980040-58980059 None:intergenic 35.0%
ATGACCTCTATTACATGCTT+CGG + chr7_4:58980043-58980062 Msa1166820:CDS 35.0%
! AACATATGTGGCCTCTTTTA+TGG + chr7_4:58980069-58980088 Msa1166820:CDS 35.0%
!!! TCCGTTACTTTTTTGTCAGA+TGG + chr7_4:58980104-58980123 Msa1166820:intron 35.0%
GTTTGACTAATAAATTGGGG+TGG - chr7_4:58980268-58980287 None:intergenic 35.0%
! CTTTTCCTGACATCTTTTAG+TGG - chr7_4:58980341-58980360 None:intergenic 35.0%
CTCCCATCTTTCATTAATGA+AGG - chr7_4:58980472-58980491 None:intergenic 35.0%
GCAACTCTATAACTAGTCAT+TGG - chr7_4:58980536-58980555 None:intergenic 35.0%
TTACTGTACTTCGATTGTCA+CGG - chr7_4:58980585-58980604 None:intergenic 35.0%
AGTAACCAAGCATATGAAAC+TGG + chr7_4:58980600-58980619 Msa1166820:intron 35.0%
TATGTCCAGTTTCATATGCT+TGG - chr7_4:58980608-58980627 None:intergenic 35.0%
TTACAAGTGCACAAATACAC+AGG - chr7_4:58980862-58980881 None:intergenic 35.0%
GCCTTATCTGTATATAGGAT+TGG + chr7_4:58980890-58980909 Msa1166820:intron 35.0%
CTCCCTGTTTGATATTCTTT+AGG - chr7_4:58981075-58981094 None:intergenic 35.0%
AATTATTAACACAAGGCAGG+GGG - chr7_4:58981117-58981136 None:intergenic 35.0%
ACTAAACTTATAAATCGGGG+AGG + chr7_4:58981365-58981384 Msa1166820:intron 35.0%
GAAATGCACAAAGAAATTGG+TGG - chr7_4:58981506-58981525 None:intergenic 35.0%
CAGTGAACATCACAATAAAC+TGG - chr7_4:58981616-58981635 None:intergenic 35.0%
CAGTTTATTGTGATGTTCAC+TGG + chr7_4:58981614-58981633 Msa1166820:CDS 35.0%
TTTATTGTGATGTTCACTGG+TGG + chr7_4:58981617-58981636 Msa1166820:CDS 35.0%
TATATTTCTCAGTCAACCAG+AGG + chr7_4:58981677-58981696 Msa1166820:CDS 35.0%
TTCTATGAAAATACTCCCTC+TGG + chr7_4:58981891-58981910 Msa1166820:intron 35.0%
AAATTGATGAGCATGCATCT+AGG - chr7_4:58982015-58982034 None:intergenic 35.0%
TAGTGGTTACAGAATCACTT+AGG - chr7_4:58982323-58982342 None:intergenic 35.0%
! AACGCAGACAAAGATTTTAG+TGG - chr7_4:58982340-58982359 None:intergenic 35.0%
ACTAAAATCTTTGTCTGCGT+TGG + chr7_4:58982339-58982358 Msa1166820:intron 35.0%
CTAAAATCTTTGTCTGCGTT+GGG + chr7_4:58982340-58982359 Msa1166820:intron 35.0%
TAAAATCTTTGTCTGCGTTG+GGG + chr7_4:58982341-58982360 Msa1166820:intron 35.0%
ATTTCCACAATTAGAGTCGT+TGG + chr7_4:58982399-58982418 Msa1166820:intron 35.0%
GATACTATAGTGATGAGATC+CGG + chr7_4:58982424-58982443 Msa1166820:intron 35.0%
ATACTATAGTGATGAGATCC+GGG + chr7_4:58982425-58982444 Msa1166820:intron 35.0%
! GCAATGTTTGGAATTTGAAG+AGG + chr7_4:58982463-58982482 Msa1166820:intron 35.0%
CCATATCTCTTTCTCTTCAA+TGG - chr7_4:58982494-58982513 None:intergenic 35.0%
CCATTGAAGAGAAAGAGATA+TGG + chr7_4:58982491-58982510 Msa1166820:intron 35.0%
!! CACAAAAAACTGGTCTTCTT+TGG - chr7_4:58982557-58982576 None:intergenic 35.0%
!!! CAAAGAAGACCAGTTTTTTG+TGG + chr7_4:58982555-58982574 Msa1166820:intron 35.0%
CAAATTTGAGTACCTTCATG+TGG + chr7_4:58982776-58982795 Msa1166820:intron 35.0%
ATTGATGCATACTTTGGTGA+GGG + chr7_4:58982822-58982841 Msa1166820:intron 35.0%
AACAAAGATCCTAGACAAGA+GGG - chr7_4:58982873-58982892 None:intergenic 35.0%
AAACAAAGATCCTAGACAAG+AGG - chr7_4:58982874-58982893 None:intergenic 35.0%
!!! TAACTTGCTCCTCTTTTGAA+CGG - chr7_4:58982912-58982931 None:intergenic 35.0%
AGAGATAGAGAAGCAAAACT+TGG + chr7_4:58982957-58982976 Msa1166820:intron 35.0%
GAGATAGAGAAGCAAAACTT+GGG + chr7_4:58982958-58982977 Msa1166820:intron 35.0%
AGATAGAGAAGCAAAACTTG+GGG + chr7_4:58982959-58982978 Msa1166820:intron 35.0%
TTAATCCCTGTCAATGATCA+TGG + chr7_4:58983106-58983125 Msa1166820:intron 35.0%
AGAGGTAAGCACAAAAAGTT+GGG - chr7_4:58983141-58983160 None:intergenic 35.0%
AAGAGGTAAGCACAAAAAGT+TGG - chr7_4:58983142-58983161 None:intergenic 35.0%
! ATGGTGTAAGCACATTTTAC+AGG - chr7_4:58983268-58983287 None:intergenic 35.0%
TGAAAACCAGCAATGATTCT+GGG - chr7_4:58983670-58983689 None:intergenic 35.0%
ATGAAGTACGAAAACTGGAT+AGG - chr7_4:58983755-58983774 None:intergenic 35.0%
AGTCAATGAAGTACGAAAAC+TGG - chr7_4:58983760-58983779 None:intergenic 35.0%
CAAATTGCGGAAAAACAACA+TGG - chr7_4:58983996-58984015 None:intergenic 35.0%
! TAATCCTTTTATCCACTGCT+TGG + chr7_4:58984026-58984045 Msa1166820:intron 35.0%
! AATCCTTTTATCCACTGCTT+GGG + chr7_4:58984027-58984046 Msa1166820:intron 35.0%
TAATTCTAATTCCCAAGCAG+TGG - chr7_4:58984041-58984060 None:intergenic 35.0%
GCTTTACAGTTTACACAAAC+AGG - chr7_4:58984070-58984089 None:intergenic 35.0%
ATTTAATCTAGGAAAGAGGG+GGG - chr7_4:58984174-58984193 None:intergenic 35.0%
CATTTAATCTAGGAAAGAGG+GGG - chr7_4:58984175-58984194 None:intergenic 35.0%
GCATTTAATCTAGGAAAGAG+GGG - chr7_4:58984176-58984195 None:intergenic 35.0%
CATCTCCATGCATTTAATCT+AGG - chr7_4:58984185-58984204 None:intergenic 35.0%
GAAGATATTGCGGCTAATAA+TGG + chr7_4:58984214-58984233 Msa1166820:CDS 35.0%
AAAGATAACGAGTTTGCACA+AGG + chr7_4:58984247-58984266 Msa1166820:CDS 35.0%
TTTGCACAAGGATCATTAGA+TGG + chr7_4:58984259-58984278 Msa1166820:CDS 35.0%
AGGATACATTTATTCCACCT+TGG + chr7_4:58984305-58984324 Msa1166820:CDS 35.0%
ATGTAAATCAGAATGGATCC+CGG - chr7_4:58984672-58984691 None:intergenic 35.0%
GATCCATTCTGATTTACATG+AGG + chr7_4:58984673-58984692 Msa1166820:intron 35.0%
AGACTACCAAAAAGAGAGTT+AGG + chr7_4:58984714-58984733 Msa1166820:intron 35.0%
! CTTACACCTAACTCTCTTTT+TGG - chr7_4:58984723-58984742 None:intergenic 35.0%
CCCGTACTACTAAATTTATG+AGG - chr7_4:58984787-58984806 None:intergenic 35.0%
AGTAGAATTTCATGAGCTTC+TGG + chr7_4:58985041-58985060 Msa1166820:intron 35.0%
AGGTTTCAAATAACCAGGTA+AGG - chr7_4:58985109-58985128 None:intergenic 35.0%
AACTCAGGTTTCAAATAACC+AGG - chr7_4:58985114-58985133 None:intergenic 35.0%
AAATAAACCAAGCACAACTC+AGG - chr7_4:58985129-58985148 None:intergenic 35.0%
!! TTACAGTTTTGTGACTGAAC+CGG + chr7_4:58985156-58985175 Msa1166820:intron 35.0%
AAATCTGAATCAAAAGCTGC+TGG + chr7_4:58985220-58985239 Msa1166820:CDS 35.0%
! AATTTTCGAAGGAGACCAAT+CGG - chr7_4:58985447-58985466 None:intergenic 35.0%
ATGGGAAGAACCGAGAAAAT+CGG - chr7_4:58976668-58976687 None:intergenic 40.0%
! TTTCGAATTCGGTGAGAACT+GGG - chr7_4:58976952-58976971 None:intergenic 40.0%
AGTTCTCACCGAATTCGAAA+CGG + chr7_4:58976952-58976971 Msa1166820:CDS 40.0%
! AAACGTACCCTAAGTTCTGA+AGG - chr7_4:58977003-58977022 None:intergenic 40.0%
! CTTCGATGTTTTATACTGGC+AGG + chr7_4:58977116-58977135 Msa1166820:intron 40.0%
ATTGAGAACATTCATCGGTG+AGG - chr7_4:58977173-58977192 None:intergenic 40.0%
GATGAATGTTCTCAATCCAG+TGG + chr7_4:58977177-58977196 Msa1166820:CDS 40.0%
AACTAACTTTGCTGAACCAC+TGG - chr7_4:58977196-58977215 None:intergenic 40.0%
!! TGATGCTTTTGTTTGCAGCT+TGG + chr7_4:58977684-58977703 Msa1166820:intron 40.0%
! TCAGCTGTTGATAGATCTTC+TGG + chr7_4:58977814-58977833 Msa1166820:CDS 40.0%
TCCTCTGAATGTCATATACC+TGG + chr7_4:58978071-58978090 Msa1166820:CDS 40.0%
ATGTCATATACCTGGCAAGA+AGG + chr7_4:58978079-58978098 Msa1166820:CDS 40.0%
TAGGTGTATCTTATTCCTGC+CGG - chr7_4:58978901-58978920 None:intergenic 40.0%
GAACACAAAAGCCATTGTGT+TGG + chr7_4:58979208-58979227 Msa1166820:intron 40.0%
TGACACACAAACAGGAAACT+AGG + chr7_4:58979542-58979561 Msa1166820:intron 40.0%
!! ATGCAAAACTTTGAAGCCCT+GGG - chr7_4:58979802-58979821 None:intergenic 40.0%
!! AATGCAAAACTTTGAAGCCC+TGG - chr7_4:58979803-58979822 None:intergenic 40.0%
TCTTCCGAAGCATGTAATAG+AGG - chr7_4:58980050-58980069 None:intergenic 40.0%
ATGCTTCGGAAGAACATATG+TGG + chr7_4:58980057-58980076 Msa1166820:CDS 40.0%
TCATTGGATACAAGGGTGAA+GGG - chr7_4:58980520-58980539 None:intergenic 40.0%
CGGGAATGAAGAATTCTGAA+GGG - chr7_4:58980565-58980584 None:intergenic 40.0%
ACGGGAATGAAGAATTCTGA+AGG - chr7_4:58980566-58980585 None:intergenic 40.0%
TACTGTACTTCGATTGTCAC+GGG - chr7_4:58980584-58980603 None:intergenic 40.0%
AATGTCAGCACATTGATCAG+TGG - chr7_4:58980691-58980710 None:intergenic 40.0%
CTTTGAGCTGCATATCACAA+GGG - chr7_4:58980743-58980762 None:intergenic 40.0%
TCTAGCAATTTCAGCCACAA+AGG - chr7_4:58980821-58980840 None:intergenic 40.0%
! GTGCAGCCTTATCTGTATAT+AGG + chr7_4:58980885-58980904 Msa1166820:intron 40.0%
! GCTATCAACGTTTTACAGAC+AGG - chr7_4:58980986-58981005 None:intergenic 40.0%
! AGAAGTGTAGAGAGAGAGTT+TGG - chr7_4:58981041-58981060 None:intergenic 40.0%
GCTAAATCTTCATGTGCCTT+TGG + chr7_4:58981443-58981462 Msa1166820:intron 40.0%
! CAACAAGGGATGTACTTTTC+TGG + chr7_4:58982062-58982081 Msa1166820:intron 40.0%
!!! ATCACAGTTTTGACTCTCGT+TGG - chr7_4:58982262-58982281 None:intergenic 40.0%
AAAATCTTTGTCTGCGTTGG+GGG + chr7_4:58982342-58982361 Msa1166820:intron 40.0%
TCAACCAACGACTCTAATTG+TGG - chr7_4:58982406-58982425 None:intergenic 40.0%
CATTGATGCATACTTTGGTG+AGG + chr7_4:58982821-58982840 Msa1166820:intron 40.0%
! GAGGGTCTCTGAACTTATTT+TGG + chr7_4:58982840-58982859 Msa1166820:intron 40.0%
GCAAGTTACAACTGAGGATT+TGG + chr7_4:58982924-58982943 Msa1166820:CDS 40.0%
GTTCTCCATGATCATTGACA+GGG - chr7_4:58983114-58983133 None:intergenic 40.0%
TGTTCTCCATGATCATTGAC+AGG - chr7_4:58983115-58983134 None:intergenic 40.0%
CTAATTAGGAGACAACAGAG+AGG - chr7_4:58983207-58983226 None:intergenic 40.0%
CATTTATTGTGCTGCAGTTG+TGG + chr7_4:58983466-58983485 Msa1166820:intron 40.0%
TAATAGCCCAGAATCATTGC+TGG + chr7_4:58983661-58983680 Msa1166820:CDS 40.0%
CTGAAAACCAGCAATGATTC+TGG - chr7_4:58983671-58983690 None:intergenic 40.0%
!!! GAATCATTGCTGGTTTTCAG+TGG + chr7_4:58983671-58983690 Msa1166820:CDS 40.0%
GATAAGTCAGAGCAGAACTT+TGG - chr7_4:58983916-58983935 None:intergenic 40.0%
ATTCCCAAGCAGTGGATAAA+AGG - chr7_4:58984033-58984052 None:intergenic 40.0%
GAGAAGAGCTGAAGATATTG+CGG + chr7_4:58984204-58984223 Msa1166820:CDS 40.0%
!! CGGCTAATAATGGGTCTATT+TGG + chr7_4:58984224-58984243 Msa1166820:CDS 40.0%
CATATACGGCTGATAATCCA+AGG - chr7_4:58984325-58984344 None:intergenic 40.0%
! AGCCGTATATGTGCATTGAT+GGG + chr7_4:58984334-58984353 Msa1166820:CDS 40.0%
AGCCCATCAATGCACATATA+CGG - chr7_4:58984339-58984358 None:intergenic 40.0%
GCTGGAATCCATTTAATAGC+CGG + chr7_4:58984650-58984669 Msa1166820:intron 40.0%
CTGGAATCCATTTAATAGCC+GGG + chr7_4:58984651-58984670 Msa1166820:intron 40.0%
AATGGATCCCGGCTATTAAA+TGG - chr7_4:58984661-58984680 None:intergenic 40.0%
CTGCCTCATGTAAATCAGAA+TGG - chr7_4:58984679-58984698 None:intergenic 40.0%
GAAACACAAGCACAGACAAT+GGG - chr7_4:58984927-58984946 None:intergenic 40.0%
AGAAACACAAGCACAGACAA+TGG - chr7_4:58984928-58984947 None:intergenic 40.0%
GCACGCCATTGAATTAAAAC+TGG + chr7_4:58985078-58985097 Msa1166820:intron 40.0%
! TTTGAAACCTGAGTTGTGCT+TGG + chr7_4:58985119-58985138 Msa1166820:intron 40.0%
TAAATGCTTACCCTTCCGAT+TGG + chr7_4:58985429-58985448 Msa1166820:three_prime_UTR 40.0%
! GCAACACGCTCTTACAATTT+TGG - chr7_4:58985493-58985512 None:intergenic 40.0%
TGGGAAGAACCGAGAAAATC+GGG - chr7_4:58976667-58976686 None:intergenic 45.0%
ATTCAATCTCCCGCTACGTT+AGG + chr7_4:58976716-58976735 Msa1166820:five_prime_UTR 45.0%
TTCAATCTCCCGCTACGTTA+GGG + chr7_4:58976717-58976736 Msa1166820:five_prime_UTR 45.0%
TTGAGTGTACCCTAACGTAG+CGG - chr7_4:58976729-58976748 None:intergenic 45.0%
! AGTAGCTACTTTCGCCATTC+AGG - chr7_4:58976914-58976933 None:intergenic 45.0%
! GTTTCGAATTCGGTGAGAAC+TGG - chr7_4:58976953-58976972 None:intergenic 45.0%
!! ATTGAAGCGAGAAAGTGTCG+TGG + chr7_4:58977146-58977165 Msa1166820:CDS 45.0%
! TATTTGCAGTGTCTCTGAGG+TGG + chr7_4:58977284-58977303 Msa1166820:intron 45.0%
TATTTGCCACCAAAAAGCCG+AGG + chr7_4:58977373-58977392 Msa1166820:CDS 45.0%
! CTTAAACCTCGGCTTTTTGG+TGG - chr7_4:58977382-58977401 None:intergenic 45.0%
! GCCGAGGTTTAAGATTCCAT+CGG + chr7_4:58977389-58977408 Msa1166820:CDS 45.0%
CCCGATGGAATCTTAAACCT+CGG - chr7_4:58977393-58977412 None:intergenic 45.0%
! CCGAGGTTTAAGATTCCATC+GGG + chr7_4:58977390-58977409 Msa1166820:CDS 45.0%
! CGAGGTTTAAGATTCCATCG+GGG + chr7_4:58977391-58977410 Msa1166820:CDS 45.0%
! GTTTAAGATTCCATCGGGGA+AGG + chr7_4:58977395-58977414 Msa1166820:CDS 45.0%
! TTCACATTTTCCTTCCCCGA+TGG - chr7_4:58977408-58977427 None:intergenic 45.0%
ATCGGGGAAGGAAAATGTGA+AGG + chr7_4:58977407-58977426 Msa1166820:CDS 45.0%
TTGGAGAAATCTGCTACCTC+AGG + chr7_4:58977703-58977722 Msa1166820:CDS 45.0%
GCTAATCCATTATCACCACG+CGG - chr7_4:58977996-58978015 None:intergenic 45.0%
!! TTAGCTACCGATTCATCCGA+TGG + chr7_4:58978011-58978030 Msa1166820:CDS 45.0%
GCCAGGTATATGACATTCAG+AGG - chr7_4:58978075-58978094 None:intergenic 45.0%
AGGGGATACTATTCGCATAC+TGG - chr7_4:58978129-58978148 None:intergenic 45.0%
TTACCAATTCGCAGAAGCAG+GGG - chr7_4:58978147-58978166 None:intergenic 45.0%
CTTACCAATTCGCAGAAGCA+GGG - chr7_4:58978148-58978167 None:intergenic 45.0%
ACTTACCAATTCGCAGAAGC+AGG - chr7_4:58978149-58978168 None:intergenic 45.0%
AGGTGTATCTTATTCCTGCC+GGG - chr7_4:58978900-58978919 None:intergenic 45.0%
ACGTTTGGTAAGGTCTTCGT+GGG - chr7_4:58979056-58979075 None:intergenic 45.0%
AACGTTTGGTAAGGTCTTCG+TGG - chr7_4:58979057-58979076 None:intergenic 45.0%
CATCTTACAGCCCAACACAA+TGG - chr7_4:58979222-58979241 None:intergenic 45.0%
AGAAGGCGGAAGAACAGATT+GGG - chr7_4:58979838-58979857 None:intergenic 45.0%
TAGAAGGCGGAAGAACAGAT+TGG - chr7_4:58979839-58979858 None:intergenic 45.0%
TTGAGCTCATCAACTGCAGA+AGG + chr7_4:58979870-58979889 Msa1166820:CDS 45.0%
GTTCTTAAGGAAACGGCAAG+TGG + chr7_4:58980002-58980021 Msa1166820:CDS 45.0%
AGGGAGTTCAGCTGTTATAC+TGG - chr7_4:58980501-58980520 None:intergenic 45.0%
GTCATTGGATACAAGGGTGA+AGG - chr7_4:58980521-58980540 None:intergenic 45.0%
CCTTTGAGCTGCATATCACA+AGG - chr7_4:58980744-58980763 None:intergenic 45.0%
CCTTGTGATATGCAGCTCAA+AGG + chr7_4:58980741-58980760 Msa1166820:intron 45.0%
CATACAAGTACAGAGCGAGT+AGG + chr7_4:58981793-58981812 Msa1166820:intron 45.0%
! TTTCTGGTAATGCTTGCCTC+AGG + chr7_4:58981838-58981857 Msa1166820:intron 45.0%
GACGCTGCTCATTGGAAAAA+AGG - chr7_4:58981990-58982009 None:intergenic 45.0%
ATAGATCCGGCTGTTCAACA+AGG + chr7_4:58982047-58982066 Msa1166820:intron 45.0%
TAGATCCGGCTGTTCAACAA+GGG + chr7_4:58982048-58982067 Msa1166820:intron 45.0%
TACATCCCTTGTTGAACAGC+CGG - chr7_4:58982056-58982075 None:intergenic 45.0%
!!! GGGATGTACTTTTCTGGAGT+TGG + chr7_4:58982068-58982087 Msa1166820:intron 45.0%
TCTTTAGTGTTGCGCCTGTT+GGG + chr7_4:58982160-58982179 Msa1166820:intron 45.0%
CTAGCTGTTATTGACCCAAC+AGG - chr7_4:58982177-58982196 None:intergenic 45.0%
TTGACTCTCGTTGGCAGAAA+GGG - chr7_4:58982253-58982272 None:intergenic 45.0%
TTTGACTCTCGTTGGCAGAA+AGG - chr7_4:58982254-58982273 None:intergenic 45.0%
AGCAACAGCCTTGCAATGTT+TGG + chr7_4:58982451-58982470 Msa1166820:intron 45.0%
! TCCTCTTTTGAACGGCAAAG+AGG - chr7_4:58982904-58982923 None:intergenic 45.0%
AGAGGAGCAAGTTACAACTG+AGG + chr7_4:58982918-58982937 Msa1166820:CDS 45.0%
ATTAGCTGACGCCACTTAGT+GGG + chr7_4:58983031-58983050 Msa1166820:intron 45.0%
! CATTTGGAACAATGCAGACC+CGG + chr7_4:58983612-58983631 Msa1166820:intron 45.0%
! GTCAGAGCAGAACTTTGGAA+CGG - chr7_4:58983911-58983930 None:intergenic 45.0%
TGTCAGCTGTCACATACATC+AGG - chr7_4:58983938-58983957 None:intergenic 45.0%
ATACGGCTGATAATCCAAGG+TGG - chr7_4:58984322-58984341 None:intergenic 45.0%
CAGCCGTATATGTGCATTGA+TGG + chr7_4:58984333-58984352 Msa1166820:CDS 45.0%
CGTTATCAGAGCTCAACACA+TGG - chr7_4:58984456-58984475 None:intergenic 45.0%
! TGTGTTGAGCTCTGATAACG+AGG + chr7_4:58984456-58984475 Msa1166820:intron 45.0%
! ACAAGCACAGACAATGGGTT+GGG - chr7_4:58984922-58984941 None:intergenic 45.0%
! CAATGAAGTGTCACTGCGAA+AGG - chr7_4:58984982-58985001 None:intergenic 45.0%
GCAACTCAAGACTAATCAGC+AGG - chr7_4:58985011-58985030 None:intergenic 45.0%
AAAACTGGAATCGCCTTACC+TGG + chr7_4:58985093-58985112 Msa1166820:intron 45.0%
CAAAGCAACATTCAGTCCAC+TGG - chr7_4:58985185-58985204 None:intergenic 45.0%
!!! TAATTTAAAATGAAAATAAT+TGG - chr7_4:58976573-58976592 None:intergenic 5.0%
!!! TTTTTATTTTATTTGTTTTT+TGG + chr7_4:58976601-58976620 Msa1166820:five_prime_UTR 5.0%
!! AAAAAAACATATTAAATTTA+AGG + chr7_4:58978267-58978286 Msa1166820:intron 5.0%
!!! TTTTTTTTTTTTTTTTTTTC+TGG + chr7_4:58981822-58981841 Msa1166820:intron 5.0%
!! GCGGTGTCGTATCAGTGAAT+GGG - chr7_4:58976686-58976705 None:intergenic 50.0%
!! AGCGGTGTCGTATCAGTGAA+TGG - chr7_4:58976687-58976706 None:intergenic 50.0%
TGAGTGTACCCTAACGTAGC+GGG - chr7_4:58976728-58976747 None:intergenic 50.0%
!! GTGTCTCTGAGGTGGACAAT+AGG + chr7_4:58977292-58977311 Msa1166820:intron 50.0%
CTAGGCGCCCTAAATAATCC+TGG - chr7_4:58977327-58977346 None:intergenic 50.0%
TCGGTGGTTAAGAGACAGCA+AGG + chr7_4:58977595-58977614 Msa1166820:CDS 50.0%
CGGTGGTTAAGAGACAGCAA+GGG + chr7_4:58977596-58977615 Msa1166820:CDS 50.0%
GGTGGTTAAGAGACAGCAAG+GGG + chr7_4:58977597-58977616 Msa1166820:CDS 50.0%
AGAGACAGCAAGGGGTTTCA+CGG + chr7_4:58977605-58977624 Msa1166820:CDS 50.0%
GAAATCTGCTACCTCAGGAG+AGG + chr7_4:58977708-58977727 Msa1166820:CDS 50.0%
TACCTCAGGAGAGGTTACCA+AGG + chr7_4:58977717-58977736 Msa1166820:CDS 50.0%
! ATCCTTGGTAACCTCTCCTG+AGG - chr7_4:58977722-58977741 None:intergenic 50.0%
TCAGGAGAGGTTACCAAGGA+TGG + chr7_4:58977721-58977740 Msa1166820:CDS 50.0%
TACCAAGGATGGTGTGTTGC+AGG + chr7_4:58977732-58977751 Msa1166820:CDS 50.0%
TCCACGTCCATCGGATGAAT+CGG - chr7_4:58978021-58978040 None:intergenic 50.0%
TGCTGAATCTCCACGTCCAT+CGG - chr7_4:58978030-58978049 None:intergenic 50.0%
TATCCCCTGCTTCTGCGAAT+TGG + chr7_4:58978141-58978160 Msa1166820:intron 50.0%
CAGTGCAGGTAGGTTAACTG+AGG - chr7_4:58979750-58979769 None:intergenic 50.0%
CATTCCTGTAAGGACAGTGC+AGG - chr7_4:58979764-58979783 None:intergenic 50.0%
GAAGGCGGAAGAACAGATTG+GGG - chr7_4:58979837-58979856 None:intergenic 50.0%
AGCTCATCAACTGCAGAAGG+AGG + chr7_4:58979873-58979892 Msa1166820:CDS 50.0%
TAAGGAAACGGCAAGTGGCT+TGG + chr7_4:58980007-58980026 Msa1166820:CDS 50.0%
AAGGAAACGGCAAGTGGCTT+GGG + chr7_4:58980008-58980027 Msa1166820:CDS 50.0%
! GCAGCTCAAAGGTACAACTC+AGG + chr7_4:58980752-58980771 Msa1166820:intron 50.0%
AGGGGGAGCTCTACTTCAAT+CGG - chr7_4:58981100-58981119 None:intergenic 50.0%
CCAGTGCAAGCACAACTCAA+GGG - chr7_4:58981148-58981167 None:intergenic 50.0%
ACCAGTGCAAGCACAACTCA+AGG - chr7_4:58981149-58981168 None:intergenic 50.0%
! TCTAGGATGACGCTGCTCAT+TGG - chr7_4:58981998-58982017 None:intergenic 50.0%
GTCTTTAGTGTTGCGCCTGT+TGG + chr7_4:58982159-58982178 Msa1166820:intron 50.0%
ATCTCTCTGCAGAACAGTGC+TGG + chr7_4:58982525-58982544 Msa1166820:intron 50.0%
TCTCTCTGCAGAACAGTGCT+GGG + chr7_4:58982526-58982545 Msa1166820:intron 50.0%
GGCTGTATACCCTCTTGTCT+AGG + chr7_4:58982861-58982880 Msa1166820:intron 50.0%
GCCTCTTTGCCGTTCAAAAG+AGG + chr7_4:58982900-58982919 Msa1166820:CDS 50.0%
AGAGAAGCAAAACTTGGGGC+AGG + chr7_4:58982963-58982982 Msa1166820:intron 50.0%
CATTAGCTGACGCCACTTAG+TGG + chr7_4:58983030-58983049 Msa1166820:intron 50.0%
TGACGCCACTTAGTGGGATA+AGG + chr7_4:58983037-58983056 Msa1166820:intron 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr7_4:58983045-58983064 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr7_4:58983042-58983061 Msa1166820:intron 50.0%
CTTAGTGGGATAAGGCTTGG+TGG + chr7_4:58983045-58983064 Msa1166820:intron 50.0%
AGTGGCAGCAACAATGTGCA+TGG + chr7_4:58983689-58983708 Msa1166820:CDS 50.0%
AACGTCCACACTAGACAGTG+AGG - chr7_4:58983867-58983886 None:intergenic 50.0%
GGAACAGGAGAACACAAGAC+AGG - chr7_4:58983890-58983909 None:intergenic 50.0%
!! GCAGAACTTTGGAACGGAAC+AGG - chr7_4:58983905-58983924 None:intergenic 50.0%
!! TGTGCATTGATGGGCTCTGA+AGG + chr7_4:58984343-58984362 Msa1166820:CDS 50.0%
!! GTGCATTGATGGGCTCTGAA+GGG + chr7_4:58984344-58984363 Msa1166820:CDS 50.0%
! AGGTACGTGGAGCTTTTGCT+TGG + chr7_4:58984382-58984401 Msa1166820:intron 50.0%
AATGGGGAGGATCCATTTCC+AGG - chr7_4:58984583-58984602 None:intergenic 50.0%
CACAAGCACAGACAATGGGT+TGG - chr7_4:58984923-58984942 None:intergenic 50.0%
ACATTCAGTCCACTGGAGAC+CGG - chr7_4:58985178-58985197 None:intergenic 50.0%
CGAGGCTGCAGTAATTCCTT+TGG + chr7_4:58985256-58985275 Msa1166820:CDS 50.0%
!! TGCAGCTTCTGGAATGCCAA+AGG - chr7_4:58985275-58985294 None:intergenic 50.0%
GAAGACGTAACTGCAGCTTC+TGG - chr7_4:58985286-58985305 None:intergenic 50.0%
TCGAAGGAGACCAATCGGAA+GGG - chr7_4:58985442-58985461 None:intergenic 50.0%
TTCGAAGGAGACCAATCGGA+AGG - chr7_4:58985443-58985462 None:intergenic 50.0%
! GAACTGGGAGGCATAGCACT+TGG - chr7_4:58976937-58976956 None:intergenic 55.0%
! CGAATTCGGTGAGAACTGGG+AGG - chr7_4:58976949-58976968 None:intergenic 55.0%
CAAGGATGGTGTGTTGCAGG+CGG + chr7_4:58977735-58977754 Msa1166820:CDS 55.0%
AAGGATGGTGTGTTGCAGGC+GGG + chr7_4:58977736-58977755 Msa1166820:CDS 55.0%
!! TTGAGAGGACTAGCCTCGCT+TGG + chr7_4:58977969-58977988 Msa1166820:CDS 55.0%
CTTGGACCGCGTGGTGATAA+TGG + chr7_4:58977987-58978006 Msa1166820:CDS 55.0%
! ACCGATTCATCCGATGGACG+TGG + chr7_4:58978017-58978036 Msa1166820:CDS 55.0%
ACCTGGCAAGAAGGCTCCTT+TGG + chr7_4:58978088-58978107 Msa1166820:CDS 55.0%
TCCAAAGGAGCCTTCTTGCC+AGG - chr7_4:58978092-58978111 None:intergenic 55.0%
TCATATGGGAGGGGTAGCCT+TGG - chr7_4:58978859-58978878 None:intergenic 55.0%
AGGCTACCCCTCCCATATGA+AGG + chr7_4:58978859-58978878 Msa1166820:intron 55.0%
GGCTACCCCTCCCATATGAA+GGG + chr7_4:58978860-58978879 Msa1166820:intron 55.0%
CGTAGCCCTTCATATGGGAG+GGG - chr7_4:58978868-58978887 None:intergenic 55.0%
GCGTAGCCCTTCATATGGGA+GGG - chr7_4:58978869-58978888 None:intergenic 55.0%
! AGGGGCGTAGCCCTTCATAT+GGG - chr7_4:58978873-58978892 None:intergenic 55.0%
TTATTCCTGCCGGGCTTCAG+GGG - chr7_4:58978891-58978910 None:intergenic 55.0%
CTTATTCCTGCCGGGCTTCA+GGG - chr7_4:58978892-58978911 None:intergenic 55.0%
TCTTATTCCTGCCGGGCTTC+AGG - chr7_4:58978893-58978912 None:intergenic 55.0%
CCTGTAAGGACAGTGCAGGT+AGG - chr7_4:58979760-58979779 None:intergenic 55.0%
CCTACCTGCACTGTCCTTAC+AGG + chr7_4:58979757-58979776 Msa1166820:intron 55.0%
! ACAAAGGCGCAAACTCAGGG+TGG - chr7_4:58980805-58980824 None:intergenic 55.0%
ACCCTGAGTTTGCGCCTTTG+TGG + chr7_4:58980804-58980823 Msa1166820:intron 55.0%
! GCCACAAAGGCGCAAACTCA+GGG - chr7_4:58980808-58980827 None:intergenic 55.0%
! AGCCACAAAGGCGCAAACTC+AGG - chr7_4:58980809-58980828 None:intergenic 55.0%
! CCCTTGAGTTGTGCTTGCAC+TGG + chr7_4:58981145-58981164 Msa1166820:intron 55.0%
! GTGATGTTCACTGGTGGCGA+TGG + chr7_4:58981623-58981642 Msa1166820:CDS 55.0%
ACTCTCGTTGGCAGAAAGGG+AGG - chr7_4:58982250-58982269 None:intergenic 55.0%
! TGCAAGGCTGTTGCTTCACC+CGG - chr7_4:58982446-58982465 None:intergenic 55.0%
AGAGAATGACCTTGAGCGCC+GGG - chr7_4:58983633-58983652 None:intergenic 55.0%
CAGAGAATGACCTTGAGCGC+CGG - chr7_4:58983634-58983653 None:intergenic 55.0%
CGTGACCTCACTGTCTAGTG+TGG + chr7_4:58983859-58983878 Msa1166820:CDS 55.0%
!! CATTGATGGGCTCTGAAGGG+AGG + chr7_4:58984347-58984366 Msa1166820:CDS 55.0%
! CTCTGAAGGGAGGAGCTTTG+AGG + chr7_4:58984357-58984376 Msa1166820:CDS 55.0%
!! AAGGGAGGAGCTTTGAGGCA+AGG + chr7_4:58984362-58984381 Msa1166820:CDS 55.0%
!! GAGCTTTGAGGCAAGGTACG+TGG + chr7_4:58984369-58984388 Msa1166820:intron 55.0%
CGCCTGCAACACACCATCCT+TGG - chr7_4:58977737-58977756 None:intergenic 60.0%
ATTGGCATCAAGCCCGGCAG+CGG + chr7_4:58978188-58978207 Msa1166820:intron 60.0%
GGCGTAGCCCTTCATATGGG+AGG - chr7_4:58978870-58978889 None:intergenic 60.0%
! CAGGGGCGTAGCCCTTCATA+TGG - chr7_4:58978874-58978893 None:intergenic 60.0%
! TTCACTGGTGGCGATGGCTC+TGG + chr7_4:58981629-58981648 Msa1166820:CDS 60.0%
GTGACTGAACCGGTCTCCAG+TGG + chr7_4:58985166-58985185 Msa1166820:CDS 60.0%
GCTGGCAGTGAAAGCTTGCG+AGG + chr7_4:58985238-58985257 Msa1166820:CDS 60.0%
ATCACCACGCGGTCCAAGCG+AGG - chr7_4:58977985-58978004 None:intergenic 65.0%
TTTGCGAGCTTCGCCGCTGC+CGG - chr7_4:58978204-58978223 None:intergenic 65.0%
CAATGCAGACCCGGCGCTCA+AGG + chr7_4:58983621-58983640 Msa1166820:intron 65.0%
CTAGCCTCGCTTGGACCGCG+TGG + chr7_4:58977978-58977997 Msa1166820:CDS 70.0%
TTGCGAGCTTCGCCGCTGCC+GGG - chr7_4:58978203-58978222 None:intergenic 70.0%
AGGGCTACGCCCCTGAAGCC+CGG + chr7_4:58978879-58978898 Msa1166820:intron 70.0%
CTACGCCCCTGAAGCCCGGC+AGG + chr7_4:58978883-58978902 Msa1166820:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 58976563 58985617 58976563 ID=Msa1166820;Name=Msa1166820
chr7_4 mRNA 58976563 58985617 58976563 ID=Msa1166820-mRNA-1;Parent=Msa1166820;Name=Msa1166820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=228|0.85|0.8|1|0.78|0.66|15|239|570
chr7_4 exon 58976563 58976738 58976563 ID=Msa1166820-mRNA-1:exon:18185;Parent=Msa1166820-mRNA-1
chr7_4 exon 58976864 58977014 58976864 ID=Msa1166820-mRNA-1:exon:18186;Parent=Msa1166820-mRNA-1
chr7_4 exon 58977138 58977208 58977138 ID=Msa1166820-mRNA-1:exon:18187;Parent=Msa1166820-mRNA-1
chr7_4 exon 58977293 58977428 58977293 ID=Msa1166820-mRNA-1:exon:18188;Parent=Msa1166820-mRNA-1
chr7_4 exon 58977538 58977626 58977538 ID=Msa1166820-mRNA-1:exon:18189;Parent=Msa1166820-mRNA-1
chr7_4 exon 58977702 58977855 58977702 ID=Msa1166820-mRNA-1:exon:18190;Parent=Msa1166820-mRNA-1
chr7_4 exon 58977960 58978139 58977960 ID=Msa1166820-mRNA-1:exon:18191;Parent=Msa1166820-mRNA-1
chr7_4 exon 58979804 58979894 58979804 ID=Msa1166820-mRNA-1:exon:18192;Parent=Msa1166820-mRNA-1
chr7_4 exon 58979995 58980090 58979995 ID=Msa1166820-mRNA-1:exon:18193;Parent=Msa1166820-mRNA-1
chr7_4 exon 58981603 58981724 58981603 ID=Msa1166820-mRNA-1:exon:18194;Parent=Msa1166820-mRNA-1
chr7_4 exon 58982883 58982945 58982883 ID=Msa1166820-mRNA-1:exon:18195;Parent=Msa1166820-mRNA-1
chr7_4 exon 58983629 58983738 58983629 ID=Msa1166820-mRNA-1:exon:18196;Parent=Msa1166820-mRNA-1
chr7_4 exon 58983853 58983940 58983853 ID=Msa1166820-mRNA-1:exon:18197;Parent=Msa1166820-mRNA-1
chr7_4 exon 58984187 58984383 58984187 ID=Msa1166820-mRNA-1:exon:18198;Parent=Msa1166820-mRNA-1
chr7_4 exon 58985162 58985617 58985162 ID=Msa1166820-mRNA-1:exon:18199;Parent=Msa1166820-mRNA-1
chr7_4 five_prime_UTR 58976563 58976738 58976563 ID=Msa1166820-mRNA-1:five_prime_utr;Parent=Msa1166820-mRNA-1
chr7_4 five_prime_UTR 58976864 58976915 58976864 ID=Msa1166820-mRNA-1:five_prime_utr;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58976916 58977014 58976916 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58977138 58977208 58977138 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58977293 58977428 58977293 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58977538 58977626 58977538 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58977702 58977855 58977702 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58977960 58978139 58977960 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58979804 58979894 58979804 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58979995 58980090 58979995 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58981603 58981724 58981603 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58982883 58982945 58982883 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58983629 58983738 58983629 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58983853 58983940 58983853 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58984187 58984383 58984187 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 CDS 58985162 58985378 58985162 ID=Msa1166820-mRNA-1:cds;Parent=Msa1166820-mRNA-1
chr7_4 three_prime_UTR 58985379 58985617 58985379 ID=Msa1166820-mRNA-1:three_prime_utr;Parent=Msa1166820-mRNA-1
Gene Sequence

>Msa1166820

ATGGCGAAAGTAGCTACTCCAAGTGCTATGCCTCCCAGTTCTCACCGAATTCGAAACGGTGTTTCTATTGGTAAAAGAAAAACACCTTCAGAACTTAGGGGAGAGCAATTGAAGCGAGAAAGTGTCGTGGACCTCACCGATGAATGTTCTCAATCCAGTGGTTCAGCAAATGTCTCTGAGGTGGACAATAGGTTTAAGAAACCAGGATTATTTAGGGCGCCTAGATACAATGATACACGACTTGATGAAGTATTTGCCACCAAAAAGCCGAGGTTTAAGATTCCATCGGGGAAGGAAAATGTGAAGGAAAATCCATCTATGGAGCAAACTAGTAATCTAAAGAATGCTTCCATTTTTTCTACTTCGGTGGTTAAGAGACAGCAAGGGGTTTCACGCTTGGAGAAATCTGCTACCTCAGGAGAGGTTACCAAGGATGGTGTGTTGCAGGCGGGTGAAACAAATGAAAAATGCAGCGAAGGAAAGTTTCTTAGTGTTGCCGATCTTTCTTCAGCTGTTGATAGATCTTCTGGAGCAGTAAATATTGACATGGGAAAAGCATTGAGAGGACTAGCCTCGCTTGGACCGCGTGGTGATAATGGATTAGCTACCGATTCATCCGATGGACGTGGAGATTCAGCACCAACCATTGCAGTAAATTCTTCCTCTGAATGTCATATACCTGGCAAGAAGGCTCCTTTGGATCTTACTTTAAAAACCAGTATGCGAATAGGCTTCAAAGTTTTGCATTCATGGATGTATCCCCAATCTGTTCTTCCGCCTTCTATCATATCAGTGTTGAGCTCATCAACTGCAGAAGGAGAATTGGAGTTCTTAAGGAAACGGCAAGTGGCTTGGGAAGAATCCTTTCATGACCTCTATTACATGCTTCGGAAGAACATATGTGGCCTCTTTTATGTCTGCACTTCCCAGTTTATTGTGATGTTCACTGGTGGCGATGGCTCTGGTAAATCCAAATGTTCATGCAATGCTTATATTTCTCAGTCAACCAGAGGTTTTAGATCATTGTTAAGAGAGCATGATCTTTGTTTCTCTATGCCTCTTTGCCGTTCAAAAGAGGAGCAAGTTACAACTGAGGATTTGACCCGGCGCTCAAGGTCATTCTCTGACGTTGATAATAGCCCAGAATCATTGCTGGTTTTCAGTGGCAGCAACAATGTGCATGGCTTATTTGACCTATTACTGAATTACAGAACTCTCGTGACCTCACTGTCTAGTGTGGACGTTCCTGTCTTGTGTTCTCCTGTTCCGTTCCAAAGTTCTGCTCTGACTTATCCTGATATTAAATGCATGGAGATGAGAAGAGCTGAAGATATTGCGGCTAATAATGGGTCTATTTGGAAAGATAACGAGTTTGCACAAGGATCATTAGATGGTCTTTTATGTAGCATTGAAATTAAGGATACATTTATTCCACCTTGGATTATCAGCCGTATATGTGCATTGATGGGCTCTGAAGGGAGGAGCTTTGAGGCAAGTTTTGTGACTGAACCGGTCTCCAGTGGACTGAATGTTGCTTTGAAATCAACGTGTGAAAAATCTGAATCAAAAGCTGCTGGCAGTGAAAGCTTGCGAGGCTGCAGTAATTCCTTTGGCATTCCAGAAGCTGCAGTTACGTCTTCCCTATGTTCATGTACACTAAAAAGTGTAAAGTACTGTGATGGTTCTTATATAGCATCTCTATCCCCTGTATAA

Protein sequence

>Msa1166820

MAKVATPSAMPPSSHRIRNGVSIGKRKTPSELRGEQLKRESVVDLTDECSQSSGSANVSEVDNRFKKPGLFRAPRYNDTRLDEVFATKKPRFKIPSGKENVKENPSMEQTSNLKNASIFSTSVVKRQQGVSRLEKSATSGEVTKDGVLQAGETNEKCSEGKFLSVADLSSAVDRSSGAVNIDMGKALRGLASLGPRGDNGLATDSSDGRGDSAPTIAVNSSSECHIPGKKAPLDLTLKTSMRIGFKVLHSWMYPQSVLPPSIISVLSSSTAEGELEFLRKRQVAWEESFHDLYYMLRKNICGLFYVCTSQFIVMFTGGDGSGKSKCSCNAYISQSTRGFRSLLREHDLCFSMPLCRSKEEQVTTEDLTRRSRSFSDVDNSPESLLVFSGSNNVHGLFDLLLNYRTLVTSLSSVDVPVLCSPVPFQSSALTYPDIKCMEMRRAEDIAANNGSIWKDNEFAQGSLDGLLCSIEIKDTFIPPWIISRICALMGSEGRSFEASFVTEPVSSGLNVALKSTCEKSESKAAGSESLRGCSNSFGIPEAAVTSSLCSCTLKSVKYCDGSYIASLSPV*