AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0648760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648760 MtrunA17_Chr4g0040361 95.861 749 29 1 1 749 1 747 0.0 1394
Msa0648760 MtrunA17_Chr5g0398421 27.778 504 268 11 16 517 28 437 1.35e-37 147
Msa0648760 MtrunA17_Chr4g0056701 38.119 202 106 8 315 512 221 407 3.29e-21 97.4
Msa0648760 MtrunA17_Chr7g0218721 32.692 156 101 3 576 728 277 431 1.07e-15 80.5
Msa0648760 MtrunA17_Chr6g0454541 25.943 212 97 4 520 730 310 462 3.60e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0648760 AT1G03780.2 57.529 777 268 13 3 747 5 751 0.0 738
Msa0648760 AT1G03780.3 57.603 776 267 13 4 747 6 751 0.0 738
Msa0648760 AT1G03780.1 49.934 753 229 14 4 685 6 681 0.0 592
Msa0648760 AT4G22860.1 30.174 517 263 19 15 521 19 447 8.71e-40 154
Msa0648760 AT5G44270.1 60.577 104 40 1 631 733 192 295 1.38e-33 131
Msa0648760 AT4G22860.2 35.370 311 133 13 215 521 193 439 2.08e-30 126
Msa0648760 AT4G11990.1 39.640 222 118 8 307 526 238 445 5.19e-27 116
Msa0648760 AT4G22860.3 26.768 396 209 11 15 404 19 339 1.81e-23 103
Msa0648760 AT3G01015.1 28.444 225 101 4 520 743 306 471 3.82e-18 88.6
Msa0648760 AT5G15510.1 30.380 158 105 3 583 736 318 474 2.22e-13 73.9
Msa0648760 AT5G15510.2 30.657 137 91 2 583 716 318 453 2.84e-11 67.0
Msa0648760 AT5G15510.4 30.657 137 91 2 583 716 318 453 3.98e-11 66.6
Msa0648760 AT5G15510.3 30.657 137 91 2 583 716 318 453 3.98e-11 66.6

Find 205 sgRNAs with CRISPR-Local

Find 367 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCCCAACCACCAGAGTTTA+AGG 0.198968 4_3:-55241656 Msa0648760:intron
AGGGGTCTTGCCTTGAATTT+AGG 0.214809 4_3:+55241264 None:intergenic
ATTTCTGCCATTGATTTAAA+TGG 0.217117 4_3:+55242148 None:intergenic
CGCTGATTTGTCTCAAATTC+AGG 0.224630 4_3:+55241931 None:intergenic
AGCACAGATGAGAAAATTTA+AGG 0.234244 4_3:-55240374 Msa0648760:CDS
ACGGGATAGTCGGTGGTATA+GGG 0.241791 4_3:+55240601 None:intergenic
TCAAGTATCATAAACTTATA+TGG 0.247737 4_3:+55239213 None:intergenic
TTGCGGACCTTCTCTGGAAC+TGG 0.248620 4_3:+55240179 None:intergenic
GTTTGGAGTAGTGGAGGTTT+AGG 0.259564 4_3:+55241357 None:intergenic
GCCTCATGATAAGTCAAAAC+TGG 0.259780 4_3:-55242365 Msa0648760:CDS
GGTGGTTGGGGTGTACTTCT+TGG 0.275186 4_3:+55241667 None:intergenic
GCGTGTTTGTGTAATGTAAT+TGG 0.276229 4_3:+55244324 None:intergenic
CTTGAAAATTATGATTCTTT+TGG 0.279123 4_3:-55239195 Msa0648760:three_prime_UTR
TGGTGCATCCTCTTTCTTAA+TGG 0.281184 4_3:+55242942 None:intergenic
TACCTTAAACTCTGGTGGTT+GGG 0.282481 4_3:+55241654 None:intergenic
AACCATTGAACCGTCTTCTT+TGG 0.291708 4_3:+55239585 None:intergenic
TTTGAAAGTAAAGGGGATAT+TGG 0.292403 4_3:-55241143 Msa0648760:CDS
CATTGTTTGGGTTCTGGCTT+TGG 0.293707 4_3:+55240493 None:intergenic
AAGAGAATCAAGCCATTAAA+AGG 0.304218 4_3:-55242536 Msa0648760:CDS
GGATTTGGAGTAGTGGTTCT+TGG 0.304430 4_3:+55240834 None:intergenic
GGCAAGACCCCTAAATAAAA+AGG 0.305952 4_3:-55241253 Msa0648760:intron
TACCAATATTAATGTTGAAT+TGG 0.314212 4_3:+55239356 None:intergenic
TTTGTGCATTGTTTGGGTTC+TGG 0.314392 4_3:+55240487 None:intergenic
CGGTAACATGTTTCTTCATA+TGG 0.323397 4_3:+55241111 None:intergenic
ACCTTCTCTGGAACTGGGAT+TGG 0.327953 4_3:+55240185 None:intergenic
ACCCTAATCGGAATTGAAAA+TGG 0.330518 4_3:-55244265 Msa0648760:exon
ATCAGATCTTTGAAAGTAAA+GGG 0.335407 4_3:-55241151 Msa0648760:intron
GAGGAGGGAACCGGCGGTGG+TGG 0.337521 4_3:-55244237 Msa0648760:CDS
AGGGGTTTGCGGACCTTCTC+TGG 0.337968 4_3:+55240173 None:intergenic
AGTGTTCGAGCCTTGAATTT+TGG 0.340321 4_3:+55241847 None:intergenic
TACCAATTCAACATTAATAT+TGG 0.343304 4_3:-55239358 Msa0648760:intron
TGCTGACTGTAATCGAGTTT+TGG 0.352206 4_3:+55242596 None:intergenic
CACGGGATAGTCGGTGGTAT+AGG 0.356163 4_3:+55240600 None:intergenic
CTGCTGCTTCTTAGAATTAG+TGG 0.364095 4_3:+55242644 None:intergenic
CTTTGGAGTACACGCAAGTT+TGG 0.367595 4_3:+55239602 None:intergenic
ACCTTAAACTCTGGTGGTTG+GGG 0.367724 4_3:+55241655 None:intergenic
GGCGGGCCCTTAGTGATGTT+TGG 0.375846 4_3:+55241340 None:intergenic
AGAACTCTATCTTCAGCCTT+TGG 0.379369 4_3:+55243147 None:intergenic
TAGGGGTATGGGTTAGCCTT+TGG 0.381692 4_3:+55240619 None:intergenic
TTTAATGGCTTGATTCTCTT+GGG 0.383536 4_3:+55242539 None:intergenic
CAAACTCTTGAACTTGTGTA+AGG 0.389176 4_3:+55240153 None:intergenic
GGCCTGGTCAATGTTAGTTT+CGG 0.392621 4_3:+55241961 None:intergenic
AATTTCATACAAACCCTAAT+CGG 0.393141 4_3:-55244277 Msa0648760:five_prime_UTR
TTAAGATTATGAACTGTTTG+AGG 0.393608 4_3:-55239261 Msa0648760:three_prime_UTR
TTCAAGAACTCTTGAATCCT+TGG 0.398182 4_3:-55239495 Msa0648760:three_prime_UTR
GTGGAGGAGGGAACCGGCGG+TGG 0.399035 4_3:-55244240 Msa0648760:CDS
AAAACCAGAGCCCTTTCAAT+TGG 0.401190 4_3:-55240467 Msa0648760:CDS
GCAGCGCTCTTCACTCTAGC+AGG 0.405444 4_3:+55241901 None:intergenic
TGAAAAGATTCCTAAATTCA+AGG 0.408870 4_3:-55241274 Msa0648760:CDS
GGCTAAAATGCCAAAATTCA+AGG 0.414969 4_3:-55241857 Msa0648760:CDS
TGAATCCTTGGCACCTCCCT+AGG 0.418906 4_3:-55239483 Msa0648760:three_prime_UTR
TACACGCAAGTTTGGTGACT+TGG 0.420538 4_3:+55239610 None:intergenic
CTTAGTGATGTTTGGAGTAG+TGG 0.422991 4_3:+55241348 None:intergenic
ATTCTTCGACTTCTTGAAAG+TGG 0.423930 4_3:-55244172 Msa0648760:CDS
GTCTAGTTTACCTTAAACTC+TGG 0.423963 4_3:+55241646 None:intergenic
TGTTTGGGTTCTGGCTTTGG+TGG 0.424354 4_3:+55240496 None:intergenic
CCTTCTCTGGAACTGGGATT+GGG 0.424705 4_3:+55240186 None:intergenic
GTGTGCAGATGGAATGGATT+TGG 0.425293 4_3:+55240819 None:intergenic
TGCTACTAGCATGAGATGAC+TGG 0.425907 4_3:-55239546 Msa0648760:exon
TAGTCGGTGGTATAGGGGTA+TGG 0.426434 4_3:+55240607 None:intergenic
ATAGATTAAGGAGAAAGAAA+TGG 0.428455 4_3:-55239976 Msa0648760:intron
TTGATTCTCTTGGGTGAAGT+GGG 0.432158 4_3:+55242548 None:intergenic
ATGGCGGTGGAGGAGGGAAC+CGG 0.433272 4_3:-55244246 Msa0648760:CDS
TATCAGATCTGATCAAAGTT+TGG 0.434007 4_3:-55239520 Msa0648760:three_prime_UTR
CCATGTGAGAAGCAATTGTA+AGG 0.434855 4_3:+55243055 None:intergenic
AAAGTGAAATTCTTGAGGTT+CGG 0.436411 4_3:+55241091 None:intergenic
CTTGATTCTCTTGGGTGAAG+TGG 0.439963 4_3:+55242547 None:intergenic
TATCAGATCTTTGAAAGTAA+AGG 0.440765 4_3:-55241152 Msa0648760:intron
TTGGGGTGTACTTCTTGGCA+TGG 0.443190 4_3:+55241672 None:intergenic
GCAGCCACAAAGAGCACGGC+AGG 0.443922 4_3:-55242576 Msa0648760:CDS
TTCAACAGATGCTCCTCCTA+TGG 0.448300 4_3:+55242725 None:intergenic
GGATTATTAAAGTTTGGAAC+TGG 0.449864 4_3:+55239761 None:intergenic
CTCTCCAATTGAAAGGGCTC+TGG 0.450467 4_3:+55240463 None:intergenic
CTCATCAGAGGTGTCTCATA+AGG 0.453520 4_3:-55241492 Msa0648760:intron
ACAAGAAGAAAGACTTAGAA+TGG 0.453851 4_3:-55240407 Msa0648760:CDS
ATTGAAAATGGCGGTGGAGG+AGG 0.455855 4_3:-55244253 Msa0648760:exon
GAACTTGTGTAAGGGGTTTG+CGG 0.457924 4_3:+55240162 None:intergenic
GTCTCAAATTCAGGTGACTT+AGG 0.466017 4_3:+55241940 None:intergenic
GTTTGGGTTCTGGCTTTGGT+GGG 0.467184 4_3:+55240497 None:intergenic
GAATTCTACCATTAAGAAAG+AGG 0.468972 4_3:-55242950 Msa0648760:CDS
TTACCTTAAACTCTGGTGGT+TGG 0.469475 4_3:+55241653 None:intergenic
CTTGGAATTGTATTACGTGC+AGG 0.471005 4_3:+55240852 None:intergenic
AGTCATCTCATGCTAGTAGC+AGG 0.472789 4_3:+55239548 None:intergenic
GGAAAGTGAAGCAGCAAGAA+TGG 0.474998 4_3:-55239934 Msa0648760:intron
TGCGGACCTTCTCTGGAACT+GGG 0.475779 4_3:+55240180 None:intergenic
GAGAAAGATGAAGAGAAAGA+AGG 0.482528 4_3:+55244376 None:intergenic
TGGGGTGTACTTCTTGGCAT+GGG 0.485252 4_3:+55241673 None:intergenic
AGTCCCTGCCGTGCTCTTTG+TGG 0.487308 4_3:+55242572 None:intergenic
AGCAGCACCATTTAAATCAA+TGG 0.491115 4_3:-55242155 Msa0648760:CDS
CTCATTAGAAATTGAGCAAG+AGG 0.492046 4_3:-55241301 Msa0648760:CDS
GAGCATTATTAGCAAAGTAA+AGG 0.494258 4_3:-55243103 Msa0648760:CDS
TTATCATGAGGCAAAGTTTG+AGG 0.496875 4_3:+55242376 None:intergenic
TCAGCCACTGCGGTAGGAGG+TGG 0.498536 4_3:+55241050 None:intergenic
AAAGAGTGTTGGCCAGTGGC+AGG 0.500844 4_3:+55242095 None:intergenic
CACTACTCCAAACATCACTA+AGG 0.502230 4_3:-55241347 Msa0648760:CDS
AACTCTTGAACTTGTGTAAG+GGG 0.507791 4_3:+55240155 None:intergenic
GGAATTTCATCTAGAAACAT+TGG 0.510227 4_3:-55241552 Msa0648760:CDS
ACCTCAGTGTGCAGATGGAA+TGG 0.510925 4_3:+55240813 None:intergenic
AAAGGCTGAAGATAGAGTTC+TGG 0.513882 4_3:-55243145 Msa0648760:CDS
GAAGAGCGCTGCTGAGCTTG+AGG 0.515292 4_3:-55241890 Msa0648760:CDS
TTGAAAATGGCGGTGGAGGA+GGG 0.518626 4_3:-55244252 Msa0648760:exon
AGTAGCAGGGCTCGAAGTTG+TGG 0.520954 4_3:+55239562 None:intergenic
CTCCAAAGAAGACGGTTCAA+TGG 0.522425 4_3:-55239587 Msa0648760:CDS
CACTAGACTCTCCAATTGAA+AGG 0.523493 4_3:+55240456 None:intergenic
TAGTTTACCTTAAACTCTGG+TGG 0.523532 4_3:+55241649 None:intergenic
AACTCAGAATGAGGACAGAA+AGG 0.523648 4_3:-55242320 Msa0648760:intron
ACATAATGTGTCTACAGTAA+TGG 0.525509 4_3:+55243194 None:intergenic
GCGGTGGAGGAGGGAACCGG+CGG 0.525633 4_3:-55244243 Msa0648760:CDS
GAAGCAGCAGAACTCTAAGA+AGG 0.526823 4_3:-55242631 Msa0648760:CDS
AACGAACCTCAGTGTGCAGA+TGG 0.527708 4_3:+55240808 None:intergenic
TTCAAGAAGTCGAAGAATCT+CGG 0.529460 4_3:+55244177 None:intergenic
AGCATTCATGCCTAAAATCA+AGG 0.529753 4_3:-55243226 Msa0648760:CDS
CCTCATGATAAGTCAAAACT+GGG 0.530787 4_3:-55242364 Msa0648760:CDS
AATCCGATGACGATGTTCGT+AGG 0.531687 4_3:-55244149 Msa0648760:CDS
ACTTCTTGGCATGGGAGGCA+AGG 0.532126 4_3:+55241681 None:intergenic
CCTTACAATTGCTTCTCACA+TGG 0.532493 4_3:-55243055 Msa0648760:intron
TCATCTAGAAACATTGGCTA+GGG 0.534696 4_3:-55241546 Msa0648760:CDS
GGAATTGAAAATGGCGGTGG+AGG 0.535076 4_3:-55244256 Msa0648760:exon
AGTGATGTTTGGAGTAGTGG+AGG 0.535758 4_3:+55241351 None:intergenic
CGGGATAGTCGGTGGTATAG+GGG 0.535841 4_3:+55240602 None:intergenic
TTGATCATGTGGCAGGAAAG+AGG 0.537091 4_3:-55240712 Msa0648760:intron
AAACTCTTGAACTTGTGTAA+GGG 0.538706 4_3:+55240154 None:intergenic
ATTGATTTAAATGGTGCTGC+TGG 0.541984 4_3:+55242157 None:intergenic
GGCTCGAACACTAAATAAGA+AGG 0.542262 4_3:-55241836 Msa0648760:intron
GGAGGAGCATCTGTTGAAGT+AGG 0.544968 4_3:-55242720 Msa0648760:CDS
GATCGTTGTGCCACCACCGC+CGG 0.546241 4_3:+55244227 None:intergenic
ATGTTCGTAGGGCTGAACTT+TGG 0.547569 4_3:-55244137 Msa0648760:CDS
ATCAAATTGTGCTCTATCCA+CGG 0.548732 4_3:+55240109 None:intergenic
GTTGCAAAGTGAAATTCTTG+AGG 0.549182 4_3:+55241086 None:intergenic
AAATTCAGGTGACTTAGGCC+TGG 0.549223 4_3:+55241945 None:intergenic
ACATGAGGAAGAAATGCAAA+GGG 0.551348 4_3:-55240431 Msa0648760:CDS
AGAAGGAGGGAAAACTAGAC+AGG 0.551575 4_3:-55242505 Msa0648760:intron
TCTATCTATCAGGATGCTGT+TGG 0.552883 4_3:-55242795 Msa0648760:intron
TAGAGCACAATTTGATCAGA+AGG 0.553159 4_3:-55240102 Msa0648760:intron
TTCATCTAGAAACATTGGCT+AGG 0.554100 4_3:-55241547 Msa0648760:CDS
TGATTCTCTTGGGTGAAGTG+GGG 0.558357 4_3:+55242549 None:intergenic
GGTGTACTTCTTGGCATGGG+AGG 0.559489 4_3:+55241676 None:intergenic
CCCAATCCCAGTTCCAGAGA+AGG 0.560804 4_3:-55240186 Msa0648760:CDS
TTTGCAGATAGAGGAAGAGA+AGG 0.561388 4_3:-55239825 Msa0648760:intron
AAATAATTCAACTTCTCTTG+AGG 0.562138 4_3:-55242902 Msa0648760:intron
GTCAGCAGCCACAAAGAGCA+CGG 0.563187 4_3:-55242580 Msa0648760:CDS
TTCATGCCTAAAATCAAGGC+TGG 0.563926 4_3:-55243222 Msa0648760:CDS
ACTAGACTCTCCAATTGAAA+GGG 0.564195 4_3:+55240457 None:intergenic
TACTAGCAAAACTCAGAATG+AGG 0.564329 4_3:-55242329 Msa0648760:CDS
ATCCGATGACGATGTTCGTA+GGG 0.564439 4_3:-55244148 Msa0648760:CDS
TGAATTTGAGACAAATCAGC+GGG 0.565017 4_3:-55241929 Msa0648760:CDS
GGTTTAGGTTCAGTGAGATG+AGG 0.565547 4_3:+55241372 None:intergenic
ATAAACACAGCGACATCCAT+AGG 0.565860 4_3:-55242741 Msa0648760:CDS
ACACGCAAGTTTGGTGACTT+GGG 0.566834 4_3:+55239611 None:intergenic
ACACTATTACAGAGACACCT+AGG 0.568444 4_3:+55239466 None:intergenic
TTTGCAGAAAGAATTGGAAG+AGG 0.572019 4_3:-55240656 Msa0648760:CDS
ATCGGAATTGAAAATGGCGG+TGG 0.573398 4_3:-55244259 Msa0648760:exon
AGTCGGTGGTATAGGGGTAT+GGG 0.573848 4_3:+55240608 None:intergenic
TGAGCTTGAGGAAGAAATGA+TGG 0.579227 4_3:-55241878 Msa0648760:CDS
AAATCAGCCACTGCGGTAGG+AGG 0.580750 4_3:+55241047 None:intergenic
CAGCGCTCTTCACTCTAGCA+GGG 0.580928 4_3:+55241902 None:intergenic
GGAAGCAACAAGGGTTCCAA+AGG 0.584855 4_3:-55240635 Msa0648760:CDS
TTCACTTTGCAACAAGTGAG+AGG 0.585436 4_3:-55241076 Msa0648760:CDS
GAAAATGAGTACTCATAAAG+CGG 0.588932 4_3:-55242769 Msa0648760:CDS
AGGCACTGAAACAGATGAGA+AGG 0.589015 4_3:-55239805 Msa0648760:CDS
TAGTACGAGAGACCTGCCAC+TGG 0.589099 4_3:-55242107 Msa0648760:CDS
AATTACATGGGAAAGAGTGT+TGG 0.590862 4_3:+55242084 None:intergenic
GTCATCTCATGCTAGTAGCA+GGG 0.592556 4_3:+55239549 None:intergenic
AATAAATCAGCCACTGCGGT+AGG 0.593305 4_3:+55241044 None:intergenic
AGCCCTACGAACATCGTCAT+CGG 0.602840 4_3:+55244146 None:intergenic
GCTACTAGCATGAGATGACT+GGG 0.606598 4_3:-55239545 Msa0648760:exon
ATGGAATGGATTTGGAGTAG+TGG 0.607859 4_3:+55240827 None:intergenic
TTTGGAACTGGTCTAGCATG+AGG 0.611616 4_3:+55239773 None:intergenic
GACATGAGGAAGAAATGCAA+AGG 0.612700 4_3:-55240432 Msa0648760:CDS
CTGAATTTGAGACAAATCAG+CGG 0.614339 4_3:-55241930 Msa0648760:CDS
AGTGGCTGATTTATTTGACA+AGG 0.617787 4_3:-55241036 Msa0648760:intron
GAAAGAGAAGAAACTGTACA+TGG 0.621766 4_3:-55240683 Msa0648760:CDS
AATGTAATTGGAGGGAAGTG+TGG 0.623373 4_3:+55244336 None:intergenic
CACTATTACAGAGACACCTA+GGG 0.627559 4_3:+55239467 None:intergenic
GGAGAGTCTAGTGAGACATG+AGG 0.627749 4_3:-55240446 Msa0648760:CDS
AACCGAAACTAACATTGACC+AGG 0.631638 4_3:-55241963 Msa0648760:CDS
TTGGAACTGGTCTAGCATGA+GGG 0.632293 4_3:+55239774 None:intergenic
ACTACTCCAAACATCACTAA+GGG 0.632859 4_3:-55241346 Msa0648760:CDS
AAAGGAAGATGATAGAGCCG+AGG 0.633440 4_3:-55243085 Msa0648760:CDS
AATTGGAAGAGGAAGCAACA+AGG 0.634739 4_3:-55240645 Msa0648760:CDS
ATTGGAAGAGGAAGCAACAA+GGG 0.636751 4_3:-55240644 Msa0648760:CDS
AGCTTCAAAAGCCTCATCAG+AGG 0.640671 4_3:-55241504 Msa0648760:CDS
TGGGAAAGAGTGTTGGCCAG+TGG 0.641745 4_3:+55242091 None:intergenic
AGACACCTAGGGAGGTGCCA+AGG 0.645124 4_3:+55239478 None:intergenic
CTTATGAGACACCTCTGATG+AGG 0.646858 4_3:+55241493 None:intergenic
ACATTTGAATCATCGAGCCG+TGG 0.648390 4_3:-55240126 Msa0648760:CDS
CAGCCACAAAGAGCACGGCA+GGG 0.651204 4_3:-55242575 Msa0648760:CDS
TTGTACCACGGGATAGTCGG+TGG 0.652413 4_3:+55240594 None:intergenic
TGAAGCTGACAATATGCCAA+AGG 0.653084 4_3:-55243163 Msa0648760:CDS
TCAGATCTTTGAAAGTAAAG+GGG 0.653685 4_3:-55241150 Msa0648760:intron
ACTTTGCTAATAATGCTCTG+TGG 0.655786 4_3:+55243108 None:intergenic
AGAAGGAGCATAAGATAAAG+CGG 0.661665 4_3:+55244107 None:intergenic
TGTTTGTGTAATGTAATTGG+AGG 0.662243 4_3:+55244327 None:intergenic
TGCGTGTACTCCAAAGAAGA+CGG 0.663597 4_3:-55239595 Msa0648760:CDS
AACACAGCGACATCCATAGG+AGG 0.663915 4_3:-55242738 Msa0648760:CDS
GTCAAATAAATCAGCCACTG+CGG 0.672423 4_3:+55241040 None:intergenic
GTTTCCACCTCCTACCGCAG+TGG 0.677524 4_3:-55241054 Msa0648760:CDS
AGAGGATGCACCATGCTGCG+AGG 0.678833 4_3:-55242932 Msa0648760:CDS
CTATACCACCGACTATCCCG+TGG 0.684644 4_3:-55240599 Msa0648760:intron
GAAACAGATGAGAAGGACAA+TGG 0.686536 4_3:-55239798 Msa0648760:CDS
GTTTGTGTAATGTAATTGGA+GGG 0.686668 4_3:+55244328 None:intergenic
TATTACAGAGACACCTAGGG+AGG 0.700064 4_3:+55239470 None:intergenic
CTAATCGGAATTGAAAATGG+CGG 0.706738 4_3:-55244262 Msa0648760:exon
GGTATACAAACGATACAGAG+AGG 0.718065 4_3:-55239955 Msa0648760:CDS
TCCATTCCATCTGCACACTG+AGG 0.724592 4_3:-55240814 Msa0648760:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTCAATTATAAGATA+GGG - chr4_3:55239580-55239599 Msa0648760:CDS 15.0%
!! TAACAATTTGATTAAGAAAT+AGG - chr4_3:55239990-55240009 Msa0648760:intron 15.0%
!! AAAAAAACATAAGTTACTAA+TGG + chr4_3:55242173-55242192 None:intergenic 15.0%
!!! TTATGTTTTTTTATTGAAAC+AGG - chr4_3:55242181-55242200 Msa0648760:CDS 15.0%
!!! AAAAAAGAAGTAAATGATTT+TGG + chr4_3:55242684-55242703 None:intergenic 15.0%
!! TATAAAAATTAATCGAGAAT+TGG + chr4_3:55243597-55243616 None:intergenic 15.0%
!!! CGATTAATTTTTATAGATTA+AGG - chr4_3:55243602-55243621 Msa0648760:intron 15.0%
!! CAGAAATTCAATTATAAGAT+AGG - chr4_3:55239579-55239598 Msa0648760:CDS 20.0%
!!! AGAAGTTGAATTATTTTCTT+CGG + chr4_3:55240684-55240703 None:intergenic 20.0%
!!! TTCTAATTTTTGCCTTTTAA+TGG + chr4_3:55241069-55241088 None:intergenic 20.0%
!! ATTAAAAGGCAAAAATTAGA+AGG - chr4_3:55241068-55241087 Msa0648760:CDS 20.0%
!!! TGATTGAACTTTTTATGTAA+AGG - chr4_3:55241384-55241403 Msa0648760:CDS 20.0%
!!! AATGTGATTGATAATTACAT+GGG + chr4_3:55241521-55241540 None:intergenic 20.0%
!! AAAAATATCTCTCTATTCTT+TGG + chr4_3:55241969-55241988 None:intergenic 20.0%
!!! ATAAGGTATTTTTTACTAAC+AGG - chr4_3:55242115-55242134 Msa0648760:CDS 20.0%
!!! ACTATTACCTTTTTATTTAG+GGG + chr4_3:55242347-55242366 None:intergenic 20.0%
!!! CACTATTACCTTTTTATTTA+GGG + chr4_3:55242348-55242367 None:intergenic 20.0%
!!! TCACTATTACCTTTTTATTT+AGG + chr4_3:55242349-55242368 None:intergenic 20.0%
!! ATTCAGATGAAAAGAAATTT+AGG + chr4_3:55243370-55243389 None:intergenic 20.0%
!!! TTTAAAGTTGAAGACAAAAA+CGG + chr4_3:55243527-55243546 None:intergenic 20.0%
!! CAAAAAGGATTATTAAAGTT+TGG + chr4_3:55243838-55243857 None:intergenic 20.0%
!! TATTCAAAAGATGAAAAATG+GGG + chr4_3:55243905-55243924 None:intergenic 20.0%
!! GTATTCAAAAGATGAAAAAT+GGG + chr4_3:55243906-55243925 None:intergenic 20.0%
!! AGTATTCAAAAGATGAAAAA+TGG + chr4_3:55243907-55243926 None:intergenic 20.0%
!! TACCAATTCAACATTAATAT+TGG - chr4_3:55244232-55244251 Msa0648760:CDS 20.0%
!! TACCAATATTAATGTTGAAT+TGG + chr4_3:55244237-55244256 None:intergenic 20.0%
!! TACCAATTCAACATTAATAT+TGG - chr4_3:55244232-55244251 Msa0648760:CDS 20.0%
!! TACCAATATTAATGTTGAAT+TGG + chr4_3:55244237-55244256 None:intergenic 20.0%
!! TCAAGTATCATAAACTTATA+TGG + chr4_3:55244380-55244399 None:intergenic 20.0%
!!! CTTGAAAATTATGATTCTTT+TGG - chr4_3:55244395-55244414 Msa0648760:five_prime_UTR 20.0%
! AATTTCATACAAACCCTAAT+CGG - chr4_3:55239313-55239332 Msa0648760:intron 25.0%
!! GAGAAATTGATTTCGTAATT+AGG - chr4_3:55239547-55239566 Msa0648760:exon 25.0%
!!! TTTCAGATTTTTTGTTGCTT+AGG - chr4_3:55239822-55239841 Msa0648760:intron 25.0%
!!! TTCAGATTTTTTGTTGCTTA+GGG - chr4_3:55239823-55239842 Msa0648760:intron 25.0%
!!! TTTGATTTTGACTTGGTAAT+TGG - chr4_3:55239856-55239875 Msa0648760:intron 25.0%
!!! TTGATTTTGACTTGGTAATT+GGG - chr4_3:55239857-55239876 Msa0648760:intron 25.0%
! CTCTATATGATTCATACTAT+AGG - chr4_3:55239918-55239937 Msa0648760:intron 25.0%
! AACTGTGTTTCAATTATGTT+AGG - chr4_3:55239941-55239960 Msa0648760:CDS 25.0%
! AAATAGGATACAATTTCTCA+AGG - chr4_3:55240006-55240025 Msa0648760:intron 25.0%
! AATAGGATACAATTTCTCAA+GGG - chr4_3:55240007-55240026 Msa0648760:intron 25.0%
! TAAAGTTAGTTAGATAGTTG+AGG + chr4_3:55240095-55240114 None:intergenic 25.0%
!!! AAGTAGTTAAGATTTGTTAG+TGG + chr4_3:55240119-55240138 None:intergenic 25.0%
!!! ATGAAACAAATTGCTTTTCA+AGG - chr4_3:55240208-55240227 Msa0648760:intron 25.0%
!!! ATCCTCATAGTTTTATGTTT+CGG - chr4_3:55240237-55240256 Msa0648760:intron 25.0%
!!! ATTGTTTCTATGATGTACAA+AGG - chr4_3:55240311-55240330 Msa0648760:intron 25.0%
!!! TTGTTTCTATGATGTACAAA+GGG - chr4_3:55240312-55240331 Msa0648760:intron 25.0%
! TGTTGGGTAATTACAAAAAA+TGG + chr4_3:55240573-55240592 None:intergenic 25.0%
! TTTGTAATTACCCAACAATT+TGG - chr4_3:55240576-55240595 Msa0648760:intron 25.0%
! AAAAATGAACTATGAGCAAA+TGG + chr4_3:55240618-55240637 None:intergenic 25.0%
! AAATAATTCAACTTCTCTTG+AGG - chr4_3:55240688-55240707 Msa0648760:CDS 25.0%
! AGACAATAGTAATAAAAACC+AGG + chr4_3:55240760-55240779 None:intergenic 25.0%
! TATCTATCTATCTATCTATC+AGG - chr4_3:55240785-55240804 Msa0648760:intron 25.0%
!!! AGTTAAAGTTTGAGGTATTT+TGG + chr4_3:55241147-55241166 None:intergenic 25.0%
! ATAGCTAAAGATTGAAACAA+AGG + chr4_3:55241353-55241372 None:intergenic 25.0%
!!! ATTTCTGCCATTGATTTAAA+TGG + chr4_3:55241445-55241464 None:intergenic 25.0%
!! GAATGTGATTGATAATTACA+TGG + chr4_3:55241522-55241541 None:intergenic 25.0%
!! TGTTATTTACTCAGTCAAAT+AGG - chr4_3:55241823-55241842 Msa0648760:intron 25.0%
! TGAAAAGATTCCTAAATTCA+AGG - chr4_3:55242316-55242335 Msa0648760:intron 25.0%
! AATGACAGAATGAAAATCTT+AGG + chr4_3:55242397-55242416 None:intergenic 25.0%
! GATCTGATAGATATACTATT+AGG + chr4_3:55242427-55242446 None:intergenic 25.0%
!! TATCAGATCTTTGAAAGTAA+AGG - chr4_3:55242438-55242457 Msa0648760:intron 25.0%
!! ATCAGATCTTTGAAAGTAAA+GGG - chr4_3:55242439-55242458 Msa0648760:intron 25.0%
! AATGTTGGTATTAGAAGAAT+CGG + chr4_3:55242857-55242876 None:intergenic 25.0%
! CAAAAGAAATTTAAACAACC+AGG - chr4_3:55243290-55243309 Msa0648760:intron 25.0%
! ATAGATTAAGGAGAAAGAAA+TGG - chr4_3:55243614-55243633 Msa0648760:intron 25.0%
! TTAAGATTATGAACTGTTTG+AGG - chr4_3:55244329-55244348 Msa0648760:five_prime_UTR 25.0%
GTTTGTGTAATGTAATTGGA+GGG + chr4_3:55239265-55239284 None:intergenic 30.0%
TGTTTGTGTAATGTAATTGG+AGG + chr4_3:55239266-55239285 None:intergenic 30.0%
TTGTCAGAATGAAATTGTGA+AGG - chr4_3:55239694-55239713 Msa0648760:intron 30.0%
TTCTTCTTTCATTCACTACT+TGG - chr4_3:55239774-55239793 Msa0648760:CDS 30.0%
TCTTCTTTCATTCACTACTT+GGG - chr4_3:55239775-55239794 Msa0648760:CDS 30.0%
!!! GTGAAGTTTTGATTTTGACT+TGG - chr4_3:55239849-55239868 Msa0648760:intron 30.0%
TTGTTTCAAGGCTATTTGTA+AGG + chr4_3:55240072-55240091 None:intergenic 30.0%
!! CTAGTGCAACATAATTTGTT+AGG + chr4_3:55240172-55240191 None:intergenic 30.0%
CATTGATAAACAAAGTTCTC+TGG + chr4_3:55240263-55240282 None:intergenic 30.0%
ACATAATGTGTCTACAGTAA+TGG + chr4_3:55240399-55240418 None:intergenic 30.0%
GAGCATTATTAGCAAAGTAA+AGG - chr4_3:55240487-55240506 Msa0648760:CDS 30.0%
! AATTGTAAGGTTTTCTTCCT+CGG + chr4_3:55240525-55240544 None:intergenic 30.0%
TAACCAAGAACCAAATTGTT+GGG + chr4_3:55240589-55240608 None:intergenic 30.0%
ATAACCAAGAACCAAATTGT+TGG + chr4_3:55240590-55240609 None:intergenic 30.0%
GAATTCTACCATTAAGAAAG+AGG - chr4_3:55240640-55240659 Msa0648760:CDS 30.0%
! GTATTAAGCGTGGTAATTTT+TGG - chr4_3:55240710-55240729 Msa0648760:intron 30.0%
AGGAGAAACAAGTTAGTTAT+GGG + chr4_3:55240740-55240759 None:intergenic 30.0%
GAAAATGAGTACTCATAAAG+CGG - chr4_3:55240821-55240840 Msa0648760:CDS 30.0%
TTTAATGGCTTGATTCTCTT+GGG + chr4_3:55241054-55241073 None:intergenic 30.0%
! TTTTAATGGCTTGATTCTCT+TGG + chr4_3:55241055-55241074 None:intergenic 30.0%
AAGAGAATCAAGCCATTAAA+AGG - chr4_3:55241054-55241073 Msa0648760:CDS 30.0%
AAAAGGCAAAAATTAGAAGG+AGG - chr4_3:55241071-55241090 Msa0648760:CDS 30.0%
AAAGGCAAAAATTAGAAGGA+GGG - chr4_3:55241072-55241091 Msa0648760:CDS 30.0%
CTAGACAGGTAATTGTTAAA+AGG - chr4_3:55241099-55241118 Msa0648760:CDS 30.0%
GCTTGAATAGTTAAAGTTTG+AGG + chr4_3:55241155-55241174 None:intergenic 30.0%
AAACAAAGGAAATGATCGTA+AGG + chr4_3:55241339-55241358 None:intergenic 30.0%
TGCAACAAAAAGGTAAAACA+GGG + chr4_3:55241544-55241563 None:intergenic 30.0%
! CTAACATTTCCATTTTCATC+AGG - chr4_3:55242017-55242036 Msa0648760:intron 30.0%
GATGAAATTCCTGATGAAAA+TGG + chr4_3:55242029-55242048 None:intergenic 30.0%
GGAATTTCATCTAGAAACAT+TGG - chr4_3:55242038-55242057 Msa0648760:intron 30.0%
CAGAATGAAAATCTTAGGAT+TGG + chr4_3:55242392-55242411 None:intergenic 30.0%
! TCAGATCTTTGAAAGTAAAG+GGG - chr4_3:55242440-55242459 Msa0648760:intron 30.0%
TTTGAAAGTAAAGGGGATAT+TGG - chr4_3:55242447-55242466 Msa0648760:intron 30.0%
AAAGTGAAATTCTTGAGGTT+CGG + chr4_3:55242502-55242521 None:intergenic 30.0%
TCTGCAGGAAAAAAAAACTT+GGG + chr4_3:55242612-55242631 None:intergenic 30.0%
ATCTGCAGGAAAAAAAAACT+TGG + chr4_3:55242613-55242632 None:intergenic 30.0%
TACAATCTTCTATAATCTGC+AGG + chr4_3:55242627-55242646 None:intergenic 30.0%
GGTTAATGCAATACATTGAT+TGG - chr4_3:55242831-55242850 Msa0648760:intron 30.0%
! AAATGAACACTTTTGTACCA+CGG + chr4_3:55243011-55243030 None:intergenic 30.0%
!!! TGGTACAAAAGTGTTCATTT+TGG - chr4_3:55243011-55243030 Msa0648760:intron 30.0%
!!! TACAAAAGTGTTCATTTTGG+TGG - chr4_3:55243014-55243033 Msa0648760:intron 30.0%
ACAAGAAGAAAGACTTAGAA+TGG - chr4_3:55243183-55243202 Msa0648760:CDS 30.0%
AGCACAGATGAGAAAATTTA+AGG - chr4_3:55243216-55243235 Msa0648760:CDS 30.0%
! ATTGCTCACTCTTTTAATAC+TGG + chr4_3:55243247-55243266 None:intergenic 30.0%
TCGAAAAGAAAAAAAAGTCC+TGG + chr4_3:55243311-55243330 None:intergenic 30.0%
AAACTCTTGAACTTGTGTAA+GGG + chr4_3:55243439-55243458 None:intergenic 30.0%
AAATGATACAAGTAGATAGC+TGG - chr4_3:55243544-55243563 Msa0648760:intron 30.0%
! GGATTATTAAAGTTTGGAAC+TGG + chr4_3:55243832-55243851 None:intergenic 30.0%
GAAAAATGGGGATATAGTTT+AGG + chr4_3:55243893-55243912 None:intergenic 30.0%
TATCAGATCTGATCAAAGTT+TGG - chr4_3:55244070-55244089 Msa0648760:intron 30.0%
GAGAAAGATGAAGAGAAAGA+AGG + chr4_3:55239217-55239236 None:intergenic 35.0%
GCGTGTTTGTGTAATGTAAT+TGG + chr4_3:55239269-55239288 None:intergenic 35.0%
ACCCTAATCGGAATTGAAAA+TGG - chr4_3:55239325-55239344 Msa0648760:intron 35.0%
!! GCCATTTTCAATTCCGATTA+GGG + chr4_3:55239329-55239348 None:intergenic 35.0%
CTAATCGGAATTGAAAATGG+CGG - chr4_3:55239328-55239347 Msa0648760:intron 35.0%
TTCAAGAAGTCGAAGAATCT+CGG + chr4_3:55239416-55239435 None:intergenic 35.0%
ATTCTTCGACTTCTTGAAAG+TGG - chr4_3:55239418-55239437 Msa0648760:three_prime_UTR 35.0%
! AGAAGGAGCATAAGATAAAG+CGG + chr4_3:55239486-55239505 None:intergenic 35.0%
! GGGTTTTCTTCTTTGAATCA+CGG - chr4_3:55239600-55239619 Msa0648760:CDS 35.0%
! GGTTTTCTTCTTTGAATCAC+GGG - chr4_3:55239601-55239620 Msa0648760:CDS 35.0%
! CTGTAGGAAAGTTGGAATTT+TGG - chr4_3:55239638-55239657 Msa0648760:intron 35.0%
!!! AGATTTTTTGTTGCTTAGGG+TGG - chr4_3:55239826-55239845 Msa0648760:intron 35.0%
!!! GATTTTTTGTTGCTTAGGGT+GGG - chr4_3:55239827-55239846 Msa0648760:intron 35.0%
! AGATAGTTGAGGTTGTTTCA+AGG + chr4_3:55240084-55240103 None:intergenic 35.0%
TGATGTACAAAGGGTTTACT+TGG - chr4_3:55240321-55240340 Msa0648760:intron 35.0%
AGCATTCATGCCTAAAATCA+AGG - chr4_3:55240364-55240383 Msa0648760:CDS 35.0%
ACTTTGCTAATAATGCTCTG+TGG + chr4_3:55240485-55240504 None:intergenic 35.0%
!! TTACCCAACAATTTGGTTCT+TGG - chr4_3:55240583-55240602 Msa0648760:intron 35.0%
GGAGAAACAAGTTAGTTATG+GGG + chr4_3:55240739-55240758 None:intergenic 35.0%
CAGGAGAAACAAGTTAGTTA+TGG + chr4_3:55240741-55240760 None:intergenic 35.0%
!! CATAACTAACTTGTTTCTCC+TGG - chr4_3:55240739-55240758 Msa0648760:intron 35.0%
!!! TTTTTTCGCAATGCTGGTTT+TGG + chr4_3:55240912-55240931 None:intergenic 35.0%
!!! TTGACATTTTTTCGCAATGC+TGG + chr4_3:55240918-55240937 None:intergenic 35.0%
! TAAAAGGTCTCTTCGTTTTC+TGG - chr4_3:55241115-55241134 Msa0648760:CDS 35.0%
TTATCATGAGGCAAAGTTTG+AGG + chr4_3:55241217-55241236 None:intergenic 35.0%
CCTCATGATAAGTCAAAACT+GGG - chr4_3:55241226-55241245 Msa0648760:intron 35.0%
TACTAGCAAAACTCAGAATG+AGG - chr4_3:55241261-55241280 Msa0648760:CDS 35.0%
!! ATTGATTTAAATGGTGCTGC+TGG + chr4_3:55241436-55241455 None:intergenic 35.0%
AGCAGCACCATTTAAATCAA+TGG - chr4_3:55241435-55241454 Msa0648760:intron 35.0%
! AATTACATGGGAAAGAGTGT+TGG + chr4_3:55241509-55241528 None:intergenic 35.0%
GTGCAACAAAAAGGTAAAAC+AGG + chr4_3:55241545-55241564 None:intergenic 35.0%
! TTTACCTTTTTGTTGCACCT+TGG - chr4_3:55241547-55241566 Msa0648760:CDS 35.0%
! TTACCTTTTTGTTGCACCTT+GGG - chr4_3:55241548-55241567 Msa0648760:CDS 35.0%
!! TTTCGGTTTTGTCTGTATCA+AGG + chr4_3:55241615-55241634 None:intergenic 35.0%
! CTGAATTTGAGACAAATCAG+CGG - chr4_3:55241660-55241679 Msa0648760:CDS 35.0%
! TGAATTTGAGACAAATCAGC+GGG - chr4_3:55241661-55241680 Msa0648760:CDS 35.0%
GGCTAAAATGCCAAAATTCA+AGG - chr4_3:55241733-55241752 Msa0648760:intron 35.0%
TAGTTTACCTTAAACTCTGG+TGG + chr4_3:55241944-55241963 None:intergenic 35.0%
! GTCTAGTTTACCTTAAACTC+TGG + chr4_3:55241947-55241966 None:intergenic 35.0%
! TTCATCTAGAAACATTGGCT+AGG - chr4_3:55242043-55242062 Msa0648760:intron 35.0%
! TCATCTAGAAACATTGGCTA+GGG - chr4_3:55242044-55242063 Msa0648760:intron 35.0%
ACTACTCCAAACATCACTAA+GGG - chr4_3:55242244-55242263 Msa0648760:intron 35.0%
! TCTAATGAGCTTTTCACTGT+TGG + chr4_3:55242278-55242297 None:intergenic 35.0%
CTCATTAGAAATTGAGCAAG+AGG - chr4_3:55242289-55242308 Msa0648760:intron 35.0%
CGGTAACATGTTTCTTCATA+TGG + chr4_3:55242482-55242501 None:intergenic 35.0%
GTTGCAAAGTGAAATTCTTG+AGG + chr4_3:55242507-55242526 None:intergenic 35.0%
! AGTGGCTGATTTATTTGACA+AGG - chr4_3:55242554-55242573 Msa0648760:CDS 35.0%
! GCTGATTTATTTGACAAGGT+GGG - chr4_3:55242558-55242577 Msa0648760:CDS 35.0%
CTTCAAAGAAAGCTGCAAAA+TGG + chr4_3:55242712-55242731 None:intergenic 35.0%
TACCAACATTCTTGATCATG+TGG - chr4_3:55242867-55242886 Msa0648760:intron 35.0%
GAAAGAGAAGAAACTGTACA+TGG - chr4_3:55242907-55242926 Msa0648760:CDS 35.0%
! GGAACTTTTGCAGAAAGAAT+TGG - chr4_3:55242928-55242947 Msa0648760:CDS 35.0%
TTTGCAGAAAGAATTGGAAG+AGG - chr4_3:55242934-55242953 Msa0648760:CDS 35.0%
! AATGAACACTTTTGTACCAC+GGG + chr4_3:55243010-55243029 None:intergenic 35.0%
!!! TCTGGTTTTGTGCATTGTTT+GGG + chr4_3:55243112-55243131 None:intergenic 35.0%
ACTAGACTCTCCAATTGAAA+GGG + chr4_3:55243136-55243155 None:intergenic 35.0%
ACATGAGGAAGAAATGCAAA+GGG - chr4_3:55243159-55243178 Msa0648760:CDS 35.0%
AACTCTTGAACTTGTGTAAG+GGG + chr4_3:55243438-55243457 None:intergenic 35.0%
CAAACTCTTGAACTTGTGTA+AGG + chr4_3:55243440-55243459 None:intergenic 35.0%
ATCAAATTGTGCTCTATCCA+CGG + chr4_3:55243484-55243503 None:intergenic 35.0%
TAGAGCACAATTTGATCAGA+AGG - chr4_3:55243488-55243507 Msa0648760:intron 35.0%
AAGTAGATAGCTGGAAACAA+AGG - chr4_3:55243553-55243572 Msa0648760:intron 35.0%
!! ACTTACTTTTGTGGGCAAAA+AGG + chr4_3:55243853-55243872 None:intergenic 35.0%
!! GATGCATGACTTACTTTTGT+GGG + chr4_3:55243861-55243880 None:intergenic 35.0%
!! AGATGCATGACTTACTTTTG+TGG + chr4_3:55243862-55243881 None:intergenic 35.0%
TTCAAGAACTCTTGAATCCT+TGG - chr4_3:55244095-55244114 Msa0648760:intron 35.0%
AATGTAATTGGAGGGAAGTG+TGG + chr4_3:55239257-55239276 None:intergenic 40.0%
!! CGCCATTTTCAATTCCGATT+AGG + chr4_3:55239330-55239349 None:intergenic 40.0%
AGAGAATGATGCTTACGAGA+AGG + chr4_3:55239503-55239522 None:intergenic 40.0%
GGTTTGAATGTGAAGACTGT+AGG - chr4_3:55239622-55239641 Msa0648760:CDS 40.0%
TGTGAAGACTGTAGGAAAGT+TGG - chr4_3:55239630-55239649 Msa0648760:CDS 40.0%
!! AGTTGGAATTTTGGTGTGTG+TGG - chr4_3:55239647-55239666 Msa0648760:intron 40.0%
TGTGAAGGAGACAGTGAATT+AGG - chr4_3:55239709-55239728 Msa0648760:intron 40.0%
GTGAAGGAGACAGTGAATTA+GGG - chr4_3:55239710-55239729 Msa0648760:intron 40.0%
TATGTTAGGAACCCAAGACT+TGG - chr4_3:55239955-55239974 Msa0648760:CDS 40.0%
ATGTTAGGAACCCAAGACTT+GGG - chr4_3:55239956-55239975 Msa0648760:CDS 40.0%
AGCAGTGACACTATTGTGTA+GGG + chr4_3:55240037-55240056 None:intergenic 40.0%
GGCCGAAACATAAAACTATG+AGG + chr4_3:55240242-55240261 None:intergenic 40.0%
GTACAAAGGGTTTACTTGGT+CGG - chr4_3:55240325-55240344 Msa0648760:intron 40.0%
TTCATGCCTAAAATCAAGGC+TGG - chr4_3:55240368-55240387 Msa0648760:CDS 40.0%
! GATCTACCAGCCTTGATTTT+AGG + chr4_3:55240377-55240396 None:intergenic 40.0%
TGAAGCTGACAATATGCCAA+AGG - chr4_3:55240427-55240446 Msa0648760:CDS 40.0%
AGAACTCTATCTTCAGCCTT+TGG + chr4_3:55240446-55240465 None:intergenic 40.0%
AAAGGCTGAAGATAGAGTTC+TGG - chr4_3:55240445-55240464 Msa0648760:CDS 40.0%
CCATGTGAGAAGCAATTGTA+AGG + chr4_3:55240538-55240557 None:intergenic 40.0%
CCTTACAATTGCTTCTCACA+TGG - chr4_3:55240535-55240554 Msa0648760:intron 40.0%
TGGTGCATCCTCTTTCTTAA+TGG + chr4_3:55240651-55240670 None:intergenic 40.0%
! TTCTCTTGAGGTATTAAGCG+TGG - chr4_3:55240700-55240719 Msa0648760:CDS 40.0%
TCTATCTATCAGGATGCTGT+TGG - chr4_3:55240795-55240814 Msa0648760:intron 40.0%
ATAAACACAGCGACATCCAT+AGG - chr4_3:55240849-55240868 Msa0648760:CDS 40.0%
! CTGCTGCTTCTTAGAATTAG+TGG + chr4_3:55240949-55240968 None:intergenic 40.0%
!! TGCTGACTGTAATCGAGTTT+TGG + chr4_3:55240997-55241016 None:intergenic 40.0%
TTGATTCTCTTGGGTGAAGT+GGG + chr4_3:55241045-55241064 None:intergenic 40.0%
!! GTCTCTTCGTTTTCTGGTAT+TGG - chr4_3:55241121-55241140 Msa0648760:CDS 40.0%
GCCTCATGATAAGTCAAAAC+TGG - chr4_3:55241225-55241244 Msa0648760:intron 40.0%
!!! CCCAGTTTTGACTTATCATG+AGG + chr4_3:55241229-55241248 None:intergenic 40.0%
AACTCAGAATGAGGACAGAA+AGG - chr4_3:55241270-55241289 Msa0648760:CDS 40.0%
!! AAAAGTACTCGAACATCCCA+AGG + chr4_3:55241567-55241586 None:intergenic 40.0%
AACCGAAACTAACATTGACC+AGG - chr4_3:55241627-55241646 Msa0648760:intron 40.0%
GTCTCAAATTCAGGTGACTT+AGG + chr4_3:55241653-55241672 None:intergenic 40.0%
!! CGCTGATTTGTCTCAAATTC+AGG + chr4_3:55241662-55241681 None:intergenic 40.0%
TGAGCTTGAGGAAGAAATGA+TGG - chr4_3:55241712-55241731 Msa0648760:intron 40.0%
! AGTGTTCGAGCCTTGAATTT+TGG + chr4_3:55241746-55241765 None:intergenic 40.0%
GGCTCGAACACTAAATAAGA+AGG - chr4_3:55241754-55241773 Msa0648760:intron 40.0%
TACCTTAAACTCTGGTGGTT+GGG + chr4_3:55241939-55241958 None:intergenic 40.0%
TTACCTTAAACTCTGGTGGT+TGG + chr4_3:55241940-55241959 None:intergenic 40.0%
! CTTAGTGATGTTTGGAGTAG+TGG + chr4_3:55242245-55242264 None:intergenic 40.0%
CACTACTCCAAACATCACTA+AGG - chr4_3:55242243-55242262 Msa0648760:intron 40.0%
! ATGAGCTTTTCACTGTTGGT+GGG + chr4_3:55242274-55242293 None:intergenic 40.0%
! AATGAGCTTTTCACTGTTGG+TGG + chr4_3:55242275-55242294 None:intergenic 40.0%
GGCAAGACCCCTAAATAAAA+AGG - chr4_3:55242337-55242356 Msa0648760:CDS 40.0%
TTCACTTTGCAACAAGTGAG+AGG - chr4_3:55242514-55242533 Msa0648760:CDS 40.0%
GTCAAATAAATCAGCCACTG+CGG + chr4_3:55242553-55242572 None:intergenic 40.0%
! GGCTGATTTATTTGACAAGG+TGG - chr4_3:55242557-55242576 Msa0648760:CDS 40.0%
GATTTATTTGACAAGGTGGG+TGG - chr4_3:55242561-55242580 Msa0648760:CDS 40.0%
GGAAAAAAAAACTTGGGAGC+TGG + chr4_3:55242606-55242625 None:intergenic 40.0%
CTTGGAATTGTATTACGTGC+AGG + chr4_3:55242741-55242760 None:intergenic 40.0%
! ATGGAATGGATTTGGAGTAG+TGG + chr4_3:55242766-55242785 None:intergenic 40.0%
GAGGTTCGTTTCTTTCCATT+TGG - chr4_3:55242795-55242814 Msa0648760:intron 40.0%
CCTGTCAAGTTTCAACCAAA+TGG + chr4_3:55242813-55242832 None:intergenic 40.0%
CCATTTGGTTGAAACTTGAC+AGG - chr4_3:55242810-55242829 Msa0648760:intron 40.0%
TGCCACATGATCAAGAATGT+TGG + chr4_3:55242872-55242891 None:intergenic 40.0%
AACATTCTTGATCATGTGGC+AGG - chr4_3:55242871-55242890 Msa0648760:intron 40.0%
AATTGGAAGAGGAAGCAACA+AGG - chr4_3:55242945-55242964 Msa0648760:CDS 40.0%
ATTGGAAGAGGAAGCAACAA+GGG - chr4_3:55242946-55242965 Msa0648760:CDS 40.0%
! TTTGTGCATTGTTTGGGTTC+TGG + chr4_3:55243106-55243125 None:intergenic 40.0%
!!! CTCTGGTTTTGTGCATTGTT+TGG + chr4_3:55243113-55243132 None:intergenic 40.0%
AAAACCAGAGCCCTTTCAAT+TGG - chr4_3:55243123-55243142 Msa0648760:CDS 40.0%
CACTAGACTCTCCAATTGAA+AGG + chr4_3:55243137-55243156 None:intergenic 40.0%
GACATGAGGAAGAAATGCAA+AGG - chr4_3:55243158-55243177 Msa0648760:CDS 40.0%
TTCATCTGAATGTACCTTGC+AGG - chr4_3:55243379-55243398 Msa0648760:intron 40.0%
TCATCTGAATGTACCTTGCA+GGG - chr4_3:55243380-55243399 Msa0648760:intron 40.0%
GGTATACAAACGATACAGAG+AGG - chr4_3:55243635-55243654 Msa0648760:intron 40.0%
TGAACGAACTTTGCAGATAG+AGG - chr4_3:55243756-55243775 Msa0648760:intron 40.0%
TTTGCAGATAGAGGAAGAGA+AGG - chr4_3:55243765-55243784 Msa0648760:intron 40.0%
GAAACAGATGAGAAGGACAA+TGG - chr4_3:55243792-55243811 Msa0648760:intron 40.0%
AACCATTGAACCGTCTTCTT+TGG + chr4_3:55244008-55244027 None:intergenic 40.0%
CACTATTACAGAGACACCTA+GGG + chr4_3:55244126-55244145 None:intergenic 40.0%
ACACTATTACAGAGACACCT+AGG + chr4_3:55244127-55244146 None:intergenic 40.0%
ATCGGAATTGAAAATGGCGG+TGG - chr4_3:55239331-55239350 Msa0648760:intron 45.0%
AATCCGATGACGATGTTCGT+AGG - chr4_3:55239441-55239460 Msa0648760:three_prime_UTR 45.0%
ATCCGATGACGATGTTCGTA+GGG - chr4_3:55239442-55239461 Msa0648760:three_prime_UTR 45.0%
ATGTTCGTAGGGCTGAACTT+TGG - chr4_3:55239453-55239472 Msa0648760:three_prime_UTR 45.0%
TTCTTCCGAACCCAAGTCTT+GGG + chr4_3:55239969-55239988 None:intergenic 45.0%
TTTCTTCCGAACCCAAGTCT+TGG + chr4_3:55239970-55239989 None:intergenic 45.0%
GCAGTGACACTATTGTGTAG+GGG + chr4_3:55240036-55240055 None:intergenic 45.0%
GAGCAGTGACACTATTGTGT+AGG + chr4_3:55240038-55240057 None:intergenic 45.0%
AAAGGAAGATGATAGAGCCG+AGG - chr4_3:55240505-55240524 Msa0648760:intron 45.0%
GCTTCTCACATGGTAATTGC+TGG - chr4_3:55240545-55240564 Msa0648760:intron 45.0%
TTCAACAGATGCTCCTCCTA+TGG + chr4_3:55240868-55240887 None:intergenic 45.0%
! GAAGCAGCAGAACTCTAAGA+AGG - chr4_3:55240959-55240978 Msa0648760:intron 45.0%
TGATTCTCTTGGGTGAAGTG+GGG + chr4_3:55241044-55241063 None:intergenic 45.0%
CTTGATTCTCTTGGGTGAAG+TGG + chr4_3:55241046-55241065 None:intergenic 45.0%
AGAAGGAGGGAAAACTAGAC+AGG - chr4_3:55241085-55241104 Msa0648760:CDS 45.0%
!!! AATGGTGCTGCTGGTGTTTT+TGG + chr4_3:55241427-55241446 None:intergenic 45.0%
CATCCCAAGGTGCAACAAAA+AGG + chr4_3:55241554-55241573 None:intergenic 45.0%
! GGCCTGGTCAATGTTAGTTT+CGG + chr4_3:55241632-55241651 None:intergenic 45.0%
AAATTCAGGTGACTTAGGCC+TGG + chr4_3:55241648-55241667 None:intergenic 45.0%
ACCTTAAACTCTGGTGGTTG+GGG + chr4_3:55241938-55241957 None:intergenic 45.0%
AGCTTCAAAAGCCTCATCAG+AGG - chr4_3:55242086-55242105 Msa0648760:intron 45.0%
CTTATGAGACACCTCTGATG+AGG + chr4_3:55242100-55242119 None:intergenic 45.0%
!! CTCATCAGAGGTGTCTCATA+AGG - chr4_3:55242098-55242117 Msa0648760:CDS 45.0%
! GGTTTAGGTTCAGTGAGATG+AGG + chr4_3:55242221-55242240 None:intergenic 45.0%
! GTTTGGAGTAGTGGAGGTTT+AGG + chr4_3:55242236-55242255 None:intergenic 45.0%
! AGTGATGTTTGGAGTAGTGG+AGG + chr4_3:55242242-55242261 None:intergenic 45.0%
AGGGGTCTTGCCTTGAATTT+AGG + chr4_3:55242329-55242348 None:intergenic 45.0%
AATAAATCAGCCACTGCGGT+AGG + chr4_3:55242549-55242568 None:intergenic 45.0%
! GGATTTGGAGTAGTGGTTCT+TGG + chr4_3:55242759-55242778 None:intergenic 45.0%
! GTGTGCAGATGGAATGGATT+TGG + chr4_3:55242774-55242793 None:intergenic 45.0%
TTGATCATGTGGCAGGAAAG+AGG - chr4_3:55242878-55242897 Msa0648760:intron 45.0%
! CTTTTGTACCACGGGATAGT+CGG + chr4_3:55243002-55243021 None:intergenic 45.0%
!! CATTGTTTGGGTTCTGGCTT+TGG + chr4_3:55243100-55243119 None:intergenic 45.0%
GAACTTGTGTAAGGGGTTTG+CGG + chr4_3:55243431-55243450 None:intergenic 45.0%
ACATTTGAATCATCGAGCCG+TGG - chr4_3:55243464-55243483 Msa0648760:intron 45.0%
GGAAAGTGAAGCAGCAAGAA+TGG - chr4_3:55243656-55243675 Msa0648760:intron 45.0%
!! AGGCACTGAAACAGATGAGA+AGG - chr4_3:55243785-55243804 Msa0648760:intron 45.0%
! TTGGAACTGGTCTAGCATGA+GGG + chr4_3:55243819-55243838 None:intergenic 45.0%
! TTTGGAACTGGTCTAGCATG+AGG + chr4_3:55243820-55243839 None:intergenic 45.0%
CTGCACTCTATTGTTGCATC+AGG - chr4_3:55243938-55243957 Msa0648760:intron 45.0%
! ACACGCAAGTTTGGTGACTT+GGG + chr4_3:55243982-55244001 None:intergenic 45.0%
! TACACGCAAGTTTGGTGACT+TGG + chr4_3:55243983-55244002 None:intergenic 45.0%
!! CTTTGGAGTACACGCAAGTT+TGG + chr4_3:55243991-55244010 None:intergenic 45.0%
TGCGTGTACTCCAAAGAAGA+CGG - chr4_3:55243995-55244014 Msa0648760:intron 45.0%
CTCCAAAGAAGACGGTTCAA+TGG - chr4_3:55244003-55244022 Msa0648760:intron 45.0%
GTCATCTCATGCTAGTAGCA+GGG + chr4_3:55244044-55244063 None:intergenic 45.0%
AGTCATCTCATGCTAGTAGC+AGG + chr4_3:55244045-55244064 None:intergenic 45.0%
TGCTACTAGCATGAGATGAC+TGG - chr4_3:55244044-55244063 Msa0648760:intron 45.0%
GCTACTAGCATGAGATGACT+GGG - chr4_3:55244045-55244064 Msa0648760:intron 45.0%
TATTACAGAGACACCTAGGG+AGG + chr4_3:55244123-55244142 None:intergenic 45.0%
GGAATTGAAAATGGCGGTGG+AGG - chr4_3:55239334-55239353 Msa0648760:intron 50.0%
ATTGAAAATGGCGGTGGAGG+AGG - chr4_3:55239337-55239356 Msa0648760:intron 50.0%
TTGAAAATGGCGGTGGAGGA+GGG - chr4_3:55239338-55239357 Msa0648760:intron 50.0%
AGCCCTACGAACATCGTCAT+CGG + chr4_3:55239447-55239466 None:intergenic 50.0%
AGGAACCCAAGACTTGGGTT+CGG - chr4_3:55239961-55239980 Msa0648760:CDS 50.0%
AACACAGCGACATCCATAGG+AGG - chr4_3:55240852-55240871 Msa0648760:CDS 50.0%
!! GGAGGAGCATCTGTTGAAGT+AGG - chr4_3:55240870-55240889 Msa0648760:CDS 50.0%
TGGGGTGTACTTCTTGGCAT+GGG + chr4_3:55241920-55241939 None:intergenic 50.0%
TTGGGGTGTACTTCTTGGCA+TGG + chr4_3:55241921-55241940 None:intergenic 50.0%
ACCCCAACCACCAGAGTTTA+AGG - chr4_3:55241934-55241953 Msa0648760:CDS 50.0%
!! AGCTTTTCACTGTTGGTGGG+CGG + chr4_3:55242271-55242290 None:intergenic 50.0%
TCCATTCCATCTGCACACTG+AGG - chr4_3:55242776-55242795 Msa0648760:CDS 50.0%
ACCTCAGTGTGCAGATGGAA+TGG + chr4_3:55242780-55242799 None:intergenic 50.0%
AACGAACCTCAGTGTGCAGA+TGG + chr4_3:55242785-55242804 None:intergenic 50.0%
GGAAGCAACAAGGGTTCCAA+AGG - chr4_3:55242955-55242974 Msa0648760:intron 50.0%
!! TAGGGGTATGGGTTAGCCTT+TGG + chr4_3:55242974-55242993 None:intergenic 50.0%
! AGTCGGTGGTATAGGGGTAT+GGG + chr4_3:55242985-55243004 None:intergenic 50.0%
TAGTCGGTGGTATAGGGGTA+TGG + chr4_3:55242986-55243005 None:intergenic 50.0%
ACGGGATAGTCGGTGGTATA+GGG + chr4_3:55242992-55243011 None:intergenic 50.0%
!! GTTTGGGTTCTGGCTTTGGT+GGG + chr4_3:55243096-55243115 None:intergenic 50.0%
!! TGTTTGGGTTCTGGCTTTGG+TGG + chr4_3:55243097-55243116 None:intergenic 50.0%
CTCTCCAATTGAAAGGGCTC+TGG + chr4_3:55243130-55243149 None:intergenic 50.0%
GGAGAGTCTAGTGAGACATG+AGG - chr4_3:55243144-55243163 Msa0648760:CDS 50.0%
!! CCTTCTCTGGAACTGGGATT+GGG + chr4_3:55243407-55243426 None:intergenic 50.0%
!! ACCTTCTCTGGAACTGGGAT+TGG + chr4_3:55243408-55243427 None:intergenic 50.0%
! TTTTCTTCGGCCTCGCAGCA+TGG + chr4_3:55240671-55240690 None:intergenic 55.0%
GTCAGCAGCCACAAAGAGCA+CGG - chr4_3:55241010-55241029 Msa0648760:intron 55.0%
TAGTACGAGAGACCTGCCAC+TGG - chr4_3:55241483-55241502 Msa0648760:intron 55.0%
!! AAAGAGTGTTGGCCAGTGGC+AGG + chr4_3:55241498-55241517 None:intergenic 55.0%
!! TGGGAAAGAGTGTTGGCCAG+TGG + chr4_3:55241502-55241521 None:intergenic 55.0%
CAGCGCTCTTCACTCTAGCA+GGG + chr4_3:55241691-55241710 None:intergenic 55.0%
ACTTCTTGGCATGGGAGGCA+AGG + chr4_3:55241912-55241931 None:intergenic 55.0%
GGTGTACTTCTTGGCATGGG+AGG + chr4_3:55241917-55241936 None:intergenic 55.0%
GGTGGTTGGGGTGTACTTCT+TGG + chr4_3:55241926-55241945 None:intergenic 55.0%
!! GCTTTTCACTGTTGGTGGGC+GGG + chr4_3:55242270-55242289 None:intergenic 55.0%
AAATCAGCCACTGCGGTAGG+AGG + chr4_3:55242546-55242565 None:intergenic 55.0%
CGGGATAGTCGGTGGTATAG+GGG + chr4_3:55242991-55243010 None:intergenic 55.0%
CACGGGATAGTCGGTGGTAT+AGG + chr4_3:55242993-55243012 None:intergenic 55.0%
! CTATACCACCGACTATCCCG+TGG - chr4_3:55242991-55243010 Msa0648760:intron 55.0%
TTGTACCACGGGATAGTCGG+TGG + chr4_3:55242999-55243018 None:intergenic 55.0%
CCCAATCCCAGTTCCAGAGA+AGG - chr4_3:55243404-55243423 Msa0648760:intron 55.0%
!! TGCGGACCTTCTCTGGAACT+GGG + chr4_3:55243413-55243432 None:intergenic 55.0%
!! TTGCGGACCTTCTCTGGAAC+TGG + chr4_3:55243414-55243433 None:intergenic 55.0%
AGTAGCAGGGCTCGAAGTTG+TGG + chr4_3:55244031-55244050 None:intergenic 55.0%
TGAATCCTTGGCACCTCCCT+AGG - chr4_3:55244107-55244126 Msa0648760:CDS 55.0%
AGAGGATGCACCATGCTGCG+AGG - chr4_3:55240658-55240677 Msa0648760:CDS 60.0%
! CAGCCACAAAGAGCACGGCA+GGG - chr4_3:55241015-55241034 Msa0648760:intron 60.0%
AGTCCCTGCCGTGCTCTTTG+TGG + chr4_3:55241021-55241040 None:intergenic 60.0%
GCAGCGCTCTTCACTCTAGC+AGG + chr4_3:55241692-55241711 None:intergenic 60.0%
!! GAAGAGCGCTGCTGAGCTTG+AGG - chr4_3:55241700-55241719 Msa0648760:CDS 60.0%
GGCGGGCCCTTAGTGATGTT+TGG + chr4_3:55242253-55242272 None:intergenic 60.0%
GTTTCCACCTCCTACCGCAG+TGG - chr4_3:55242536-55242555 Msa0648760:CDS 60.0%
ACTGGGATTGGGTCCCTGCA+AGG + chr4_3:55243396-55243415 None:intergenic 60.0%
AGGGGTTTGCGGACCTTCTC+TGG + chr4_3:55243420-55243439 None:intergenic 60.0%
!! AGACACCTAGGGAGGTGCCA+AGG + chr4_3:55244115-55244134 None:intergenic 60.0%
ATGGCGGTGGAGGAGGGAAC+CGG - chr4_3:55239344-55239363 Msa0648760:intron 65.0%
GATCGTTGTGCCACCACCGC+CGG + chr4_3:55239366-55239385 None:intergenic 65.0%
! GCAGCCACAAAGAGCACGGC+AGG - chr4_3:55241014-55241033 Msa0648760:intron 65.0%
TCAGCCACTGCGGTAGGAGG+TGG + chr4_3:55242543-55242562 None:intergenic 65.0%
GCGGTGGAGGAGGGAACCGG+CGG - chr4_3:55239347-55239366 Msa0648760:intron 75.0%
GTGGAGGAGGGAACCGGCGG+TGG - chr4_3:55239350-55239369 Msa0648760:intron 75.0%
GAGGAGGGAACCGGCGGTGG+TGG - chr4_3:55239353-55239372 Msa0648760:intron 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 55239187 55244425 55239187 ID=Msa0648760;Name=Msa0648760
chr4_3 mRNA 55239187 55244425 55239187 ID=Msa0648760-mRNA-1;Parent=Msa0648760;Name=Msa0648760-mRNA-1;_AED=0.14;_eAED=0.14;_QI=157|1|1|1|0.94|0.89|19|293|749
chr4_3 exon 55239187 55239288 55239187 ID=Msa0648760-mRNA-1:exon:14120;Parent=Msa0648760-mRNA-1
chr4_3 exon 55239359 55239652 55239359 ID=Msa0648760-mRNA-1:exon:14119;Parent=Msa0648760-mRNA-1
chr4_3 exon 55239746 55239840 55239746 ID=Msa0648760-mRNA-1:exon:14118;Parent=Msa0648760-mRNA-1
chr4_3 exon 55239935 55239994 55239935 ID=Msa0648760-mRNA-1:exon:14117;Parent=Msa0648760-mRNA-1
chr4_3 exon 55240103 55240211 55240103 ID=Msa0648760-mRNA-1:exon:14116;Parent=Msa0648760-mRNA-1
chr4_3 exon 55240355 55240521 55240355 ID=Msa0648760-mRNA-1:exon:14115;Parent=Msa0648760-mRNA-1
chr4_3 exon 55240600 55240719 55240600 ID=Msa0648760-mRNA-1:exon:14114;Parent=Msa0648760-mRNA-1
chr4_3 exon 55240815 55240892 55240815 ID=Msa0648760-mRNA-1:exon:14113;Parent=Msa0648760-mRNA-1
chr4_3 exon 55241037 55241168 55241037 ID=Msa0648760-mRNA-1:exon:14112;Parent=Msa0648760-mRNA-1
chr4_3 exon 55241254 55241409 55241254 ID=Msa0648760-mRNA-1:exon:14111;Parent=Msa0648760-mRNA-1
chr4_3 exon 55241493 55241573 55241493 ID=Msa0648760-mRNA-1:exon:14110;Parent=Msa0648760-mRNA-1
chr4_3 exon 55241657 55241719 55241657 ID=Msa0648760-mRNA-1:exon:14109;Parent=Msa0648760-mRNA-1
chr4_3 exon 55241837 55241989 55241837 ID=Msa0648760-mRNA-1:exon:14108;Parent=Msa0648760-mRNA-1
chr4_3 exon 55242090 55242206 55242090 ID=Msa0648760-mRNA-1:exon:14107;Parent=Msa0648760-mRNA-1
chr4_3 exon 55242321 55242413 55242321 ID=Msa0648760-mRNA-1:exon:14106;Parent=Msa0648760-mRNA-1
chr4_3 exon 55242506 55242805 55242506 ID=Msa0648760-mRNA-1:exon:14105;Parent=Msa0648760-mRNA-1
chr4_3 exon 55242903 55242971 55242903 ID=Msa0648760-mRNA-1:exon:14104;Parent=Msa0648760-mRNA-1
chr4_3 exon 55243056 55243246 55243056 ID=Msa0648760-mRNA-1:exon:14103;Parent=Msa0648760-mRNA-1
chr4_3 exon 55244106 55244425 55244106 ID=Msa0648760-mRNA-1:exon:14102;Parent=Msa0648760-mRNA-1
chr4_3 five_prime_UTR 55244269 55244425 55244269 ID=Msa0648760-mRNA-1:five_prime_utr;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55244106 55244268 55244106 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55243056 55243246 55243056 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55242903 55242971 55242903 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55242506 55242805 55242506 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55242321 55242413 55242321 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55242090 55242206 55242090 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55241837 55241989 55241837 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55241657 55241719 55241657 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55241493 55241573 55241493 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55241254 55241409 55241254 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55241037 55241168 55241037 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55240815 55240892 55240815 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55240600 55240719 55240600 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55240355 55240521 55240355 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55240103 55240211 55240103 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55239935 55239994 55239935 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55239746 55239840 55239746 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 CDS 55239550 55239652 55239550 ID=Msa0648760-mRNA-1:cds;Parent=Msa0648760-mRNA-1
chr4_3 three_prime_UTR 55239359 55239549 55239359 ID=Msa0648760-mRNA-1:three_prime_utr;Parent=Msa0648760-mRNA-1
chr4_3 three_prime_UTR 55239187 55239288 55239187 ID=Msa0648760-mRNA-1:three_prime_utr;Parent=Msa0648760-mRNA-1
Gene Sequence

>Msa0648760

ATGGCGGTGGAGGAGGGAACCGGCGGTGGTGGCACAACGATCATCGACGAGATTTACGAATTCTGTGCACCGAGATTCTTCGACTTCTTGAAAGTGGAATCCGATGACGATGTTCGTAGGGCTGAACTTTGGTTTCACACCGCTTTATCTTATGCTCCTTCTCCATTCATGCCTAAAATCAAGGCTGGTAGATCCATTACTGTAGACACATTATGTGATTTTAGTGAAGCTGACAATATGCCAAAGGCTGAAGATAGAGTTCTGGAATCAAATACTCAACCACAGAGCATTATTAGCAAAGTAAAGGAAGATGATAGAGCCGAGGAAGAAAACCTTACAATTGCTTCTCACATGAATTCTACCATTAAGAAAGAGGATGCACCATGCTGCGAGGCCGAAGAAAATAATTCAACTTCTCTTGAGGATGCTGTTGGTAAGAAAATGAGTACTCATAAAGCGGAGATCATAAACACAGCGACATCCATAGGAGGAGCATCTGTTGAAGTAGGAAAAGATGCTTGCACACCAAAACCAGCATTGCGAAAAAATGTCAATGCAGCTTCCACTAATTCTAAGAAGCAGCAGAACTCTAAGAAGGTATCGACAAATACCAAAACTCGATTACAGTCAGCAGCCACAAAGAGCACGGCAGGGACTCCCCACTTCACCCAAGAGAATCAAGCCATTAAAAGGCAAAAATTAGAAGGAGGGAAAACTAGACAGATTCTGAATCTCAAACCTCAAACTTTGCCTCATGATAAGTCAAAACTGGGTTACTCTTCAAGTACTAGCAAAACTCAGAATGAGGACAGAAAGGTTTATGTTCGTGACACACCAAAAACACCAGCAGCACCATTTAAATCAATGGCAGAAATGATGAAGAAATTTGAGTCTAGTACGAGAGACCTGCCACTGGCCAACACTCTTTCCCATACAAAACCGAAACTAACATTGACCAGGCCTAAGTCACCTGAATTTGAGACAAATCAGCGGGTTCGCCCTGCTAGAGTGAAGAGCGCTGCTGAGCTTGAGGAAGAAATGATGGCTAAAATGCCAAAATTCAAGGCTCGAACACTAAATAAGAAGATTTTGCAAACTTCAACCTTGCCTCCCATGCCAAGAAGTACACCCCAACCACCAGAGTTTAAGGAATTTCATCTAGAAACATTGGCTAGGGCTCATCAAAATACAGATTCAGCTTCAAAAGCCTCATCAGAGGTGTCTCATAAGGAGAACTCATCGAAACCTCATCTCACTGAACCTAAACCTCCACTACTCCAAACATCACTAAGGGCCCGCCCACCAACAGTGAAAAGCTCATTAGAAATTGAGCAAGAGGAACTTGAAAAGATTCCTAAATTCAAGGCAAGACCCCTAAATAAAAAGATCTTTGAAAGTAAAGGGGATATTGGAATATTCTGCCATATGAAGAAACATGTTACCGAACCTCAAGAATTTCACTTTGCAACAAGTGAGAGGTTTCCACCTCCTACCGCAGTGGCTGATTTATTTGACAAGCTTTCTTTGAAGTCTGAACCTGCACGTAATACAATTCCAAGAACCACTACTCCAAATCCATTCCATCTGCACACTGAGGAAAGAGGAGCTGAGAAAGAGAAGAAACTGTACATGGAACTTTTGCAGAAAGAATTGGAAGAGGAAGCAACAAGGGTTCCAAAGGCTAACCCATACCCCTATACCACCGACTATCCCGTGATCCCACCAAAGCCAGAACCCAAACAATGCACAAAACCAGAGCCCTTTCAATTGGAGAGTCTAGTGAGACATGAGGAAGAAATGCAAAGGGAACAAGAAGAAAGACTTAGAATGGAAAGAGAAGAAGCACAGATGAGAAAATTTAAGGCGCAACCAGTATTAAAAGAGGACCCAATCCCAGTTCCAGAGAAGGTCCGCAAACCCCTTACACAAGTTCAAGAGTTTGATTTACATTTGAATCATCGAGCCGTGGATAGAGCACAATTTGATCAGAAGATTAAGGAGAAAGAAATGGTATACAAACGATACAGAGAGGAAAGTGAAGCAGCAAGAATGATAGAGGAAGAGAAGGCACTGAAACAGATGAGAAGGACAATGGTCCCTCATGCTAGACCAGTTCCAAACTTTAATAATCCTTTTTGCCCACAAAAGACTTCTAAAACAACAAAACCCAAGTCACCAAACTTGCGTGTACTCCAAAGAAGACGGTTCAATGGTTCCACAACTTCGAGCCCTGCTACTAGCATGAGATGA
Protein sequence

>Msa0648760

MAVEEGTGGGGTTIIDEIYEFCAPRFFDFLKVESDDDVRRAELWFHTALSYAPSPFMPKIKAGRSITVDTLCDFSEADNMPKAEDRVLESNTQPQSIISKVKEDDRAEEENLTIASHMNSTIKKEDAPCCEAEENNSTSLEDAVGKKMSTHKAEIINTATSIGGASVEVGKDACTPKPALRKNVNAASTNSKKQQNSKKVSTNTKTRLQSAATKSTAGTPHFTQENQAIKRQKLEGGKTRQILNLKPQTLPHDKSKLGYSSSTSKTQNEDRKVYVRDTPKTPAAPFKSMAEMMKKFESSTRDLPLANTLSHTKPKLTLTRPKSPEFETNQRVRPARVKSAAELEEEMMAKMPKFKARTLNKKILQTSTLPPMPRSTPQPPEFKEFHLETLARAHQNTDSASKASSEVSHKENSSKPHLTEPKPPLLQTSLRARPPTVKSSLEIEQEELEKIPKFKARPLNKKIFESKGDIGIFCHMKKHVTEPQEFHFATSERFPPPTAVADLFDKLSLKSEPARNTIPRTTTPNPFHLHTEERGAEKEKKLYMELLQKELEEEATRVPKANPYPYTTDYPVIPPKPEPKQCTKPEPFQLESLVRHEEEMQREQEERLRMEREEAQMRKFKAQPVLKEDPIPVPEKVRKPLTQVQEFDLHLNHRAVDRAQFDQKIKEKEMVYKRYREESEAARMIEEEKALKQMRRTMVPHARPVPNFNNPFCPQKTSKTTKPKSPNLRVLQRRRFNGSTTSSPATSMR*