AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0474230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474230 MtrunA17_Chr3g0131001 96.620 710 16 4 1 707 1 705 0.0 1400
Msa0474230 MtrunA17_Chr8g0385201 74.443 673 143 11 39 707 20 667 0.0 979
Msa0474230 MtrunA17_Chr5g0424301 65.473 698 197 8 41 706 47 732 0.0 909
Msa0474230 MtrunA17_Chr3g0115111 62.672 726 211 11 28 707 21 732 0.0 884
Msa0474230 MtrunA17_Chr3g0082501 52.514 716 269 11 48 706 59 760 0.0 696
Msa0474230 MtrunA17_Chr8g0353121 53.305 711 272 10 48 706 48 750 0.0 694
Msa0474230 MtrunA17_Chr1g0171491 49.799 745 281 13 48 706 56 793 0.0 691
Msa0474230 MtrunA17_Chr7g0256301 49.157 771 290 13 11 706 48 791 0.0 686
Msa0474230 MtrunA17_Chr1g0180261 41.272 802 291 14 49 703 47 815 0.0 556
Msa0474230 MtrunA17_Chr8g0380791 37.662 770 354 18 49 705 9 765 2.82e-155 468
Msa0474230 MtrunA17_Chr8g0380791 41.176 85 50 0 139 223 7 91 4.25e-13 72.8
Msa0474230 MtrunA17_Chr2g0316631 37.374 198 115 1 26 223 18 206 5.30e-33 129
Msa0474230 MtrunA17_Chr2g0316631 36.257 171 109 0 53 223 105 275 2.02e-28 116
Msa0474230 MtrunA17_Chr2g0316631 32.877 146 98 0 53 198 151 296 4.11e-19 89.0
Msa0474230 MtrunA17_Chr2g0316631 35.200 125 81 0 53 177 174 298 2.44e-16 80.5
Msa0474230 MtrunA17_Chr2g0316611 36.364 198 117 1 26 223 18 206 9.13e-33 130
Msa0474230 MtrunA17_Chr2g0316611 39.535 172 104 0 52 223 173 344 5.04e-29 119
Msa0474230 MtrunA17_Chr2g0316611 33.498 203 125 3 53 255 105 297 6.39e-26 110
Msa0474230 MtrunA17_Chr2g0316611 35.802 162 101 2 17 177 208 367 1.47e-21 97.4
Msa0474230 MtrunA17_Chr8g0377191 40.000 180 108 0 49 228 8 187 3.32e-32 124
Msa0474230 MtrunA17_Chr8g0377191 41.379 87 51 0 139 225 6 92 7.86e-11 62.4
Msa0474230 MtrunA17_Chr8g0377671 39.444 180 109 0 49 228 16 195 3.87e-32 126
Msa0474230 MtrunA17_Chr8g0377671 36.478 159 101 0 53 211 112 270 1.71e-21 95.5
Msa0474230 MtrunA17_Chr8g0377671 38.406 138 85 0 52 189 134 271 7.74e-21 93.6
Msa0474230 MtrunA17_Chr8g0377671 33.918 171 113 0 53 223 89 259 2.46e-20 92.0
Msa0474230 MtrunA17_Chr8g0382971 39.429 175 106 0 49 223 21 195 2.64e-31 125
Msa0474230 MtrunA17_Chr8g0382971 38.824 170 104 0 53 222 71 240 1.08e-28 118
Msa0474230 MtrunA17_Chr8g0382971 36.025 161 103 0 53 213 117 277 1.05e-19 91.3
Msa0474230 MtrunA17_Chr6g0467061 38.122 181 112 0 43 223 9 189 6.85e-31 124
Msa0474230 MtrunA17_Chr6g0467061 35.751 193 116 1 53 245 88 272 8.69e-29 117
Msa0474230 MtrunA17_Chr6g0467061 36.842 171 108 0 53 223 157 327 4.03e-24 104
Msa0474230 MtrunA17_Chr4g0059911 41.379 174 101 1 55 227 11 184 2.00e-29 120
Msa0474230 MtrunA17_Chr4g0059911 38.235 170 105 0 53 222 56 225 6.12e-29 119
Msa0474230 MtrunA17_Chr4g0059911 35.862 145 93 0 55 199 104 248 1.91e-18 87.8
Msa0474230 MtrunA17_Chr8g0336161 35.052 194 123 1 35 225 176 369 3.43e-28 118
Msa0474230 MtrunA17_Chr8g0336161 36.719 128 81 0 55 182 245 372 7.56e-18 87.0
Msa0474230 MtrunA17_Chr8g0336161 34.906 106 69 0 55 160 268 373 8.87e-14 74.3
Msa0474230 MtrunA17_Chr8g0336161 33.077 130 87 0 98 227 196 325 1.15e-13 73.9
Msa0474230 MtrunA17_Chr8g0336161 38.235 102 62 1 142 242 194 295 7.88e-11 65.1
Msa0474230 MtrunA17_Chr7g0233351 33.684 190 126 0 36 225 175 364 1.08e-27 117
Msa0474230 MtrunA17_Chr7g0233351 38.281 128 79 0 55 182 240 367 3.34e-18 88.2
Msa0474230 MtrunA17_Chr7g0233351 36.220 127 81 0 100 226 193 319 2.81e-16 82.0
Msa0474230 MtrunA17_Chr7g0233351 34.579 107 70 0 54 160 262 368 7.03e-13 71.6
Msa0474230 MtrunA17_Chr4g0055371 36.047 172 110 0 54 225 173 344 3.14e-27 115
Msa0474230 MtrunA17_Chr4g0055371 35.938 128 82 0 55 182 220 347 6.28e-15 77.8
Msa0474230 MtrunA17_Chr4g0055371 34.109 129 85 0 98 226 171 299 1.63e-14 76.3
Msa0474230 MtrunA17_Chr8g0385241 35.000 200 97 1 57 223 14 213 4.65e-27 114
Msa0474230 MtrunA17_Chr8g0385241 35.119 168 108 1 56 222 138 305 6.94e-18 87.0
Msa0474230 MtrunA17_Chr8g0385241 32.500 160 107 1 55 213 183 342 2.30e-12 69.7
Msa0474230 MtrunA17_Chr8g0385241 34.058 138 68 1 53 190 228 342 6.82e-11 65.1
Msa0474230 MtrunA17_Chr8g0377211 40.426 141 83 1 49 189 16 155 6.41e-27 107
Msa0474230 MtrunA17_Chr8g0377211 38.235 102 63 0 126 227 23 124 4.51e-15 73.6
Msa0474230 MtrunA17_Chr8g0377211 38.947 95 57 1 139 233 14 107 9.64e-12 64.3
Msa0474230 MtrunA17_Chr5g0424111 36.471 170 108 0 54 223 198 367 1.47e-25 110
Msa0474230 MtrunA17_Chr3g0114791 31.771 192 123 1 40 223 164 355 2.12e-23 103
Msa0474230 MtrunA17_Chr3g0114791 36.719 128 81 0 55 182 233 360 6.30e-16 80.9
Msa0474230 MtrunA17_Chr3g0114791 32.308 130 88 0 98 227 184 313 1.13e-13 73.9
Msa0474230 MtrunA17_Chr5g0398011 40.323 124 74 0 44 167 26 149 2.29e-22 94.0
Msa0474230 MtrunA17_Chr8g0383331 36.054 147 94 0 53 199 4 150 4.20e-20 88.2
Msa0474230 MtrunA17_Chr8g0383331 37.008 127 80 0 96 222 1 127 9.75e-19 84.0
Msa0474230 MtrunA17_Chr8g0383331 37.778 90 56 0 144 233 3 92 2.76e-11 62.8
Msa0474230 MtrunA17_Chr8g0377221 29.302 215 114 3 52 228 4 218 6.26e-18 84.7
Msa0474230 MtrunA17_Chr8g0377221 32.919 161 96 3 53 211 74 224 8.26e-16 78.6
Msa0474230 MtrunA17_Chr8g0377221 25.281 178 132 1 74 250 3 180 1.59e-12 68.6
Msa0474230 MtrunA17_Chr5g0398021 39.000 100 61 0 53 152 13 112 7.08e-18 81.3
Msa0474230 MtrunA17_Chr5g0398021 33.654 104 69 0 118 221 9 112 9.93e-12 63.5
Msa0474230 MtrunA17_Chr1g0210831 28.646 192 112 3 14 204 574 741 3.63e-14 76.3
Msa0474230 MtrunA17_Chr4g0044341 30.120 166 96 7 416 566 1495 1655 5.25e-12 69.7
Msa0474230 MtrunA17_Chr8g0383551 26.047 215 136 6 13 222 72 268 1.18e-11 67.0
Msa0474230 MtrunA17_Chr4g0069951 29.697 165 98 7 416 566 1555 1715 4.45e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0474230 AT1G21980.1 63.807 746 217 11 4 706 16 751 0.0 946
Msa0474230 AT1G77740.2 66.950 705 184 9 40 706 60 753 0.0 942
Msa0474230 AT1G77740.1 66.950 705 184 9 40 706 60 753 0.0 942
Msa0474230 AT2G26420.1 59.234 731 248 9 1 707 1 705 0.0 844
Msa0474230 AT2G26420.2 58.672 738 255 9 1 707 1 719 0.0 843
Msa0474230 AT2G26420.3 58.672 738 255 9 1 707 1 719 0.0 843
Msa0474230 AT3G07960.1 53.267 704 273 11 48 706 22 714 0.0 718
Msa0474230 AT2G41210.1 48.977 733 274 13 48 706 65 771 0.0 679
Msa0474230 AT3G56960.2 49.932 739 263 19 48 706 67 778 0.0 666
Msa0474230 AT3G56960.1 49.932 739 263 19 48 706 67 778 0.0 666
Msa0474230 AT3G07960.3 52.284 591 240 8 48 600 22 608 0.0 600
Msa0474230 AT3G07960.2 54.189 561 219 7 48 570 22 582 0.0 598
Msa0474230 AT3G07960.4 54.189 561 219 7 48 570 22 582 0.0 598
Msa0474230 AT3G09920.3 41.902 778 318 16 49 706 49 812 0.0 565
Msa0474230 AT3G09920.4 41.902 778 318 16 49 706 49 812 0.0 565
Msa0474230 AT3G09920.2 41.902 778 318 16 49 706 49 812 0.0 565
Msa0474230 AT3G09920.1 41.902 778 318 16 49 706 49 812 0.0 565
Msa0474230 AT1G10900.2 41.370 759 334 15 49 707 7 754 0.0 549
Msa0474230 AT1G10900.2 40.476 84 50 0 140 223 6 89 4.03e-11 67.0
Msa0474230 AT1G10900.1 41.370 759 334 15 49 707 7 754 0.0 549
Msa0474230 AT1G10900.1 40.476 84 50 0 140 223 6 89 4.03e-11 67.0
Msa0474230 AT1G10900.3 41.370 759 334 15 49 707 7 754 0.0 549
Msa0474230 AT1G10900.3 40.476 84 50 0 140 223 6 89 4.03e-11 67.0
Msa0474230 AT1G60890.1 45.969 459 191 7 294 705 319 767 5.74e-127 395
Msa0474230 AT1G60890.1 48.454 194 100 0 47 240 5 198 3.42e-54 199
Msa0474230 AT1G60890.2 47.477 436 173 6 316 705 354 779 6.77e-127 395
Msa0474230 AT1G60890.2 48.485 198 102 0 43 240 13 210 7.95e-55 201
Msa0474230 AT4G01190.1 38.346 399 175 10 358 704 12 391 1.18e-77 254
Msa0474230 AT4G01190.3 38.346 399 175 10 358 704 22 401 1.62e-77 254
Msa0474230 AT4G01190.2 38.346 399 175 10 358 704 22 401 1.62e-77 254
Msa0474230 AT1G01460.1 45.175 228 122 2 342 569 4 228 2.04e-61 212
Msa0474230 AT1G01460.1 48.454 97 44 2 612 707 332 423 7.91e-18 87.0
Msa0474230 AT1G21920.2 31.390 223 150 2 1 223 125 344 4.22e-27 114
Msa0474230 AT1G21920.2 37.209 129 81 0 55 183 222 350 1.51e-15 79.3
Msa0474230 AT1G21920.2 33.846 130 86 0 98 227 173 302 3.53e-12 69.3
Msa0474230 AT1G77660.1 29.596 223 157 0 1 223 126 348 4.78e-27 115
Msa0474230 AT1G77660.1 35.659 129 83 0 55 183 226 354 5.52e-15 78.2
Msa0474230 AT1G77660.1 33.077 130 87 0 98 227 177 306 1.54e-14 77.0
Msa0474230 AT1G21920.1 31.390 223 150 2 1 223 125 344 7.07e-27 114
Msa0474230 AT1G21920.1 37.209 129 81 0 55 183 222 350 1.29e-15 80.1
Msa0474230 AT1G21920.1 33.846 130 86 0 98 227 173 302 2.99e-12 69.7
Msa0474230 AT4G17080.1 34.118 170 112 0 54 223 258 427 4.68e-26 113
Msa0474230 AT4G17080.1 36.719 128 81 0 55 182 305 432 4.84e-18 88.6
Msa0474230 AT4G17080.1 32.544 169 108 2 59 227 223 385 3.77e-16 82.4
Msa0474230 AT2G35170.1 32.821 195 128 2 29 223 205 396 4.01e-25 110
Msa0474230 AT2G35170.1 36.719 128 81 0 55 182 274 401 1.53e-18 89.7
Msa0474230 AT2G35170.1 33.871 124 82 0 104 227 231 354 1.78e-14 77.0
Msa0474230 AT1G75010.1 29.375 160 88 3 46 204 595 730 5.07e-12 69.7
Msa0474230 AT1G71010.1 29.518 166 97 7 416 566 1417 1577 3.78e-11 67.4

Find 279 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGATTTAATTGAATTTA+TGG 0.058710 3_3:+77097307 None:intergenic
TTAATCTTCAATTGGGTATT+AGG 0.146414 3_3:-77096172 Msa0474230:intron
TCTGATGTAATCCTTTATTT+TGG 0.181773 3_3:-77093552 Msa0474230:CDS
ATAATGTTTCTTGCATATTT+AGG 0.190193 3_3:+77097149 None:intergenic
CTTGGTTTCAAGAGCTAAAA+TGG 0.216088 3_3:-77095053 Msa0474230:intron
GAAGCCTTGCTTATTATTAT+TGG 0.245649 3_3:-77093197 Msa0474230:three_prime_UTR
CTCTGTTGTGTGCATTCAAA+TGG 0.249220 3_3:-77092732 Msa0474230:three_prime_UTR
GTTATCATTTAGTACATCTT+AGG 0.250933 3_3:-77097209 Msa0474230:five_prime_UTR
CTTCCTTTCCTTTCCAAACT+TGG 0.251115 3_3:+77093216 None:intergenic
GAGTGTTTCGTCCGGGAATT+GGG 0.253188 3_3:-77096495 Msa0474230:CDS
TATGAAATCCCTAAACCTTT+TGG 0.258022 3_3:+77093419 None:intergenic
TTAACATTTAATTCCAAGTT+TGG 0.258879 3_3:-77093229 Msa0474230:three_prime_UTR
GGAGTGTTTCGTCCGGGAAT+TGG 0.259868 3_3:-77096496 Msa0474230:CDS
AGAAACATGTTGATAGTAAC+TGG 0.261885 3_3:+77095413 None:intergenic
TTGATCCAAAGGAGAAATTC+TGG 0.268700 3_3:-77095993 Msa0474230:CDS
GCTATATTCCAAAAGGTTTA+GGG 0.268928 3_3:-77093427 Msa0474230:CDS
CCATTATTCCCTCTGCTTCC+AGG 0.269835 3_3:+77094914 None:intergenic
CATCTTTGGTTGCATTGAAT+TGG 0.284383 3_3:-77092842 Msa0474230:three_prime_UTR
AGCTATATTCCAAAAGGTTT+AGG 0.285097 3_3:-77093428 Msa0474230:CDS
GGTGTTGGTGTTGGTGATGT+AGG 0.285814 3_3:-77096296 Msa0474230:CDS
AGAAACATTATTAACTATTT+CGG 0.287516 3_3:-77097137 Msa0474230:CDS
TACTAATTCCACGTGAAATT+TGG 0.289691 3_3:+77097379 None:intergenic
GAAAGAGTTGGGTGTTTCTT+TGG 0.293805 3_3:-77092651 Msa0474230:three_prime_UTR
TTGTCGCGTTGATTGTTTCT+TGG 0.316984 3_3:+77092533 None:intergenic
TTGGAGAAGGGTATAGTATA+GGG 0.317495 3_3:-77092996 Msa0474230:three_prime_UTR
GTGATACTTATAAAGGTTCT+TGG 0.319831 3_3:-77096772 Msa0474230:CDS
TTTGATTTAATTGAATTTAT+GGG 0.321380 3_3:+77097308 None:intergenic
CTTGTCCAGAATTTCTCCTT+TGG 0.321711 3_3:+77095988 None:intergenic
CACACTCTCTCCGCTCTTGC+TGG 0.322769 3_3:+77093645 None:intergenic
CAGACTCGATTTATTGTAAT+GGG 0.326463 3_3:-77095228 Msa0474230:CDS
TGATAGAGACTGTGAGTTCC+TGG 0.341577 3_3:-77094932 Msa0474230:CDS
ACTACTGTCCCGTGGTGTTC+AGG 0.341724 3_3:-77095903 Msa0474230:intron
ATGGTTGGGACCTAAAATTT+TGG 0.342555 3_3:+77097421 None:intergenic
GGCGTAAACTTGGAACCTTC+TGG 0.344560 3_3:+77095958 None:intergenic
TTTGGAGAAGGGTATAGTAT+AGG 0.346095 3_3:-77092997 Msa0474230:three_prime_UTR
AATATCCTTACGGAGTTTAT+CGG 0.347395 3_3:+77095134 None:intergenic
TTTGATTCTTAATCTTCAAT+TGG 0.355941 3_3:-77096180 Msa0474230:CDS
TCAGGGTCCATGGAAGGTTC+TGG 0.355954 3_3:-77096815 Msa0474230:CDS
GTTCATTGTGTCAAACCTAT+TGG 0.370452 3_3:-77095354 Msa0474230:CDS
ACGCGACAAAGCAATAAATT+TGG 0.374164 3_3:-77092519 Msa0474230:three_prime_UTR
TGTCAATGATGCCAAAATAA+AGG 0.379878 3_3:+77093541 None:intergenic
TACCTTTCTTCCATTCTCCT+TGG 0.380033 3_3:+77096900 None:intergenic
TCACCTAATGAATTGTGTTC+TGG 0.380345 3_3:-77094829 Msa0474230:intron
ACCTGGTTATACTGTTTGTA+AGG 0.382865 3_3:-77096219 Msa0474230:CDS
CCTTTCGCCTGGAGCAGTCT+TGG 0.384297 3_3:-77095071 Msa0474230:CDS
CTCGTTGGTTACGAAATTCC+TGG 0.384416 3_3:-77095379 Msa0474230:CDS
CCCCATGCCAAAGTTGGTCC+AGG 0.384426 3_3:+77093336 None:intergenic
AGGAGTAGAGGAGGAGGAGG+AGG 0.393888 3_3:+77097250 None:intergenic
TTTCTCATAGCCTTTGGAAA+TGG 0.394020 3_3:-77093164 Msa0474230:three_prime_UTR
GGAGGTATATGTGGAGGAAT+GGG 0.400881 3_3:-77096655 Msa0474230:CDS
GTATACAGTGGAAGTTTATC+AGG 0.401485 3_3:-77096974 Msa0474230:CDS
CTTGACTTCAGACTTCTTCA+AGG 0.404538 3_3:+77095620 None:intergenic
GGCCATGTCAGGTGCTCATC+AGG 0.408142 3_3:-77095443 Msa0474230:intron
ATTTGTATTTGGGAGCTTGA+TGG 0.412365 3_3:-77096404 Msa0474230:CDS
ATACAGTCAAAGATGGATAA+TGG 0.413105 3_3:-77092902 Msa0474230:three_prime_UTR
CCACTGTATACGTCGCCGTT+TGG 0.415330 3_3:+77096986 None:intergenic
GTTTGAAGGAGTAGAGGAGG+AGG 0.417184 3_3:+77097244 None:intergenic
TTGATTCTTAATCTTCAATT+GGG 0.418290 3_3:-77096179 Msa0474230:CDS
AGAAACTTGGCATAAAAGAT+AGG 0.420278 3_3:-77092404 Msa0474230:three_prime_UTR
CGCGATGGGAGTGTTTCGTC+CGG 0.422367 3_3:-77096503 Msa0474230:CDS
ATTGAGCCCTGGACCAACTT+TGG 0.424202 3_3:-77093343 Msa0474230:three_prime_UTR
GGGAAATTCTCATGGCCATC+AGG 0.424679 3_3:-77096863 Msa0474230:CDS
TATGTGGGTTGTTGGGAGAA+TGG 0.426025 3_3:-77096557 Msa0474230:CDS
GTGTTGGTGTTGGTGATGTA+GGG 0.426176 3_3:-77096295 Msa0474230:CDS
GATGGAAGTGAATCAGAGAT+TGG 0.430424 3_3:-77096320 Msa0474230:CDS
ACAGACTCGATTTATTGTAA+TGG 0.435164 3_3:-77095229 Msa0474230:intron
CCTGGAAGCAGAGGGAATAA+TGG 0.435359 3_3:-77094914 Msa0474230:CDS
ACAAATAGCAAGCATGTAAT+CGG 0.437021 3_3:+77095731 None:intergenic
TTTCATACACAGAATCTTTG+TGG 0.437698 3_3:-77093403 Msa0474230:CDS
TGATACTTATAAAGGTTCTT+GGG 0.438562 3_3:-77096771 Msa0474230:CDS
CCCTGGACCAACTTTGGCAT+GGG 0.438814 3_3:-77093337 Msa0474230:three_prime_UTR
GGAATCGTTATGTGGGTTGT+TGG 0.438945 3_3:-77096565 Msa0474230:CDS
ATACCAGAACACAATTCATT+AGG 0.439028 3_3:+77094826 None:intergenic
TTTGTATTTGGGAGCTTGAT+GGG 0.440443 3_3:-77096403 Msa0474230:CDS
ATCTAAAATCCACCGATTGA+TGG 0.444477 3_3:+77095932 None:intergenic
TGCTAATGGTGATGTGTATG+AGG 0.445109 3_3:-77096711 Msa0474230:CDS
ATATATTCTGATGCTAGTTA+AGG 0.446546 3_3:+77093308 None:intergenic
TGAAGGAGTAGAGGAGGAGG+AGG 0.446814 3_3:+77097247 None:intergenic
GGATTGGATCAGCAGCAAAC+TGG 0.447072 3_3:-77093615 Msa0474230:CDS
TTAATTCCCAGCCGGATTAG+AGG 0.447492 3_3:+77093672 None:intergenic
GTTGGGTATTTAGGCATTTG+AGG 0.449375 3_3:-77095776 Msa0474230:intron
TTGGGTATTTAGGCATTTGA+GGG 0.449393 3_3:-77095775 Msa0474230:intron
AAGGTTCTTGGGTTTCTGAT+AGG 0.451720 3_3:-77096760 Msa0474230:CDS
GTGGAAGGTGATACTTATAA+AGG 0.453599 3_3:-77096779 Msa0474230:CDS
TCTAAAATCCACCGATTGAT+GGG 0.456122 3_3:+77095933 None:intergenic
TCTGATAGGAAACATGGGTT+TGG 0.456876 3_3:-77096746 Msa0474230:CDS
CTTGGGATCAACGGCTGAGA+TGG 0.457259 3_3:+77093449 None:intergenic
GATTACATGCTTGCTATTTG+TGG 0.457685 3_3:-77095729 Msa0474230:CDS
ATGGGGAAGGGAGGTATATG+TGG 0.461629 3_3:-77096664 Msa0474230:CDS
ATACCAGAGGACCTCTAATC+CGG 0.461846 3_3:-77093683 Msa0474230:intron
TGTGGTGCTATATGTGGAAA+TGG 0.463148 3_3:-77096608 Msa0474230:CDS
ACATTGCTGCTAAAGTTTGA+AGG 0.464820 3_3:+77097230 None:intergenic
TGGGAGCTTGATGGGGAAGC+TGG 0.464916 3_3:-77096395 Msa0474230:CDS
ATCCCAAGCTATATTCCAAA+AGG 0.465411 3_3:-77093434 Msa0474230:CDS
GGGATTCAAATTTGACCTGG+TGG 0.465940 3_3:-77092941 Msa0474230:three_prime_UTR
GTCCTTGTTATTCGATCGAT+GGG 0.468826 3_3:-77096253 Msa0474230:CDS
GCGGAGAGAGTGTGTAAAGC+TGG 0.469147 3_3:-77093636 Msa0474230:CDS
GCCGTGTTCGCGGTGGTCGA+CGG 0.472053 3_3:+77097041 None:intergenic
TTTGGTCACGTAATATGAAT+CGG 0.474111 3_3:-77092501 Msa0474230:three_prime_UTR
GGTGAGAAATGTTATGCTAA+TGG 0.475438 3_3:-77096725 Msa0474230:CDS
TGAATTGGAGAGAGATCAAA+AGG 0.475491 3_3:-77092827 Msa0474230:three_prime_UTR
TTGAGGGAAATGTCTTCTCC+TGG 0.476508 3_3:-77095696 Msa0474230:CDS
GAATCGTTATGTGGGTTGTT+GGG 0.476688 3_3:-77096564 Msa0474230:CDS
GAAAAGCACAAGAAAGAGTT+GGG 0.477157 3_3:-77092662 Msa0474230:three_prime_UTR
GCCTTGCTTATTATTATTGG+TGG 0.478123 3_3:-77093194 Msa0474230:three_prime_UTR
TTTGGTTTGTGTGAGTGTAA+TGG 0.478394 3_3:+77097439 None:intergenic
GAGATTGGTGGTGTTGGTGT+TGG 0.478650 3_3:-77096305 Msa0474230:CDS
CTTCGGTGCCTCGAGAGCTT+AGG 0.479608 3_3:-77096026 Msa0474230:CDS
CAAATCGGTCATCTTGAGTA+AGG 0.481065 3_3:+77095652 None:intergenic
GGGAGGTATATGTGGAGGAA+TGG 0.483176 3_3:-77096656 Msa0474230:CDS
GGAGGTACAATTTGCAAGAT+GGG 0.484245 3_3:-77096682 Msa0474230:CDS
GTTTCTGTGAGTGTGGATGA+TGG 0.484895 3_3:-77096452 Msa0474230:CDS
TCACGTAATATGAATCGGTT+TGG 0.485070 3_3:-77092496 Msa0474230:three_prime_UTR
CAAACCTATTGGAGGCCAAA+AGG 0.485887 3_3:-77095343 Msa0474230:intron
AGCTAGAAACTGACAGAATG+AGG 0.486654 3_3:+77092757 None:intergenic
GGTGACACGCGCCGTGTTCG+CGG 0.487367 3_3:+77097031 None:intergenic
GTGTAATGGAATGGATTCAT+TGG 0.487646 3_3:+77097453 None:intergenic
CTTGAAACCAAGACTGCTCC+AGG 0.487985 3_3:+77095064 None:intergenic
TCTGTTGTGTGCATTCAAAT+GGG 0.492382 3_3:-77092731 Msa0474230:three_prime_UTR
GAAGAATGGGAATCGTTATG+TGG 0.493445 3_3:-77096573 Msa0474230:CDS
GAAGAGCGCATACCGGCCTA+TGG 0.493779 3_3:+77094661 None:intergenic
TTGATGGGGAGGCGTAAACT+TGG 0.495578 3_3:+77095948 None:intergenic
GGAATATAGCTTGGGATCAA+CGG 0.495725 3_3:+77093440 None:intergenic
GAGAGTGTGTAAAGCTGGAT+TGG 0.495931 3_3:-77093631 Msa0474230:CDS
GACCATGAGATGAACCTTTG+AGG 0.496961 3_3:+77095163 None:intergenic
CAGAGGACCTCTAATCCGGC+TGG 0.499620 3_3:-77093679 Msa0474230:CDS
TGGAGGTACAATTTGCAAGA+TGG 0.499639 3_3:-77096683 Msa0474230:CDS
TCAACGGCTGAGATGGATGT+GGG 0.500864 3_3:+77093456 None:intergenic
GTGATGTGTATGAGGGTTGG+TGG 0.503545 3_3:-77096703 Msa0474230:CDS
TGTACATGCTATGCATCATA+AGG 0.505158 3_3:-77093059 Msa0474230:three_prime_UTR
TGTATACGTCGCCGTTTGGA+AGG 0.506660 3_3:+77096990 None:intergenic
ATGTGTATGAGGGTTGGTGG+AGG 0.506922 3_3:-77096700 Msa0474230:CDS
TTGTGTTGGGAAGCATGCTT+CGG 0.507813 3_3:-77096043 Msa0474230:CDS
TACAATTTGCAAGATGGGGA+AGG 0.509651 3_3:-77096677 Msa0474230:CDS
GATTCAAATTTGACCTGGTG+GGG 0.512743 3_3:-77092939 Msa0474230:three_prime_UTR
TAGTCTCATCAATATCCTTA+CGG 0.513121 3_3:+77095124 None:intergenic
TGGAGGACAAATAACATGGT+TGG 0.516054 3_3:-77093383 Msa0474230:exon
TAGTGGAAGTGGTTGTGTAA+TGG 0.516760 3_3:+77097402 None:intergenic
GACCTCAAAGGTTCATCTCA+TGG 0.520619 3_3:-77095165 Msa0474230:CDS
CATAAGCGATTTGACCTCAA+AGG 0.521058 3_3:-77095177 Msa0474230:CDS
TGGGTTTCTGATAGGAAACA+TGG 0.521152 3_3:-77096752 Msa0474230:CDS
AGAAAAGCACAAGAAAGAGT+TGG 0.524496 3_3:-77092663 Msa0474230:three_prime_UTR
ATTCAAATTTGACCTGGTGG+GGG 0.525146 3_3:-77092938 Msa0474230:three_prime_UTR
GCCACCAATAATAATAAGCA+AGG 0.526304 3_3:+77093193 None:intergenic
AGTGTTTCGTCCGGGAATTG+GGG 0.526312 3_3:-77096494 Msa0474230:CDS
CAAAGGAGAAATTCTGGACA+AGG 0.526565 3_3:-77095987 Msa0474230:CDS
GGATTCAAATTTGACCTGGT+GGG 0.528408 3_3:-77092940 Msa0474230:three_prime_UTR
ATCAACGGCTGAGATGGATG+TGG 0.528438 3_3:+77093455 None:intergenic
GTGAAATTTGGTAGTGGAAG+TGG 0.529725 3_3:+77097391 None:intergenic
AGTAATCATCACGAAAATGA+AGG 0.531530 3_3:+77094872 None:intergenic
TTGGAAATGGAATGAGGTGG+GGG 0.531711 3_3:-77093151 Msa0474230:three_prime_UTR
TACCAAGGAGAATGGAAGAA+AGG 0.532077 3_3:-77096902 Msa0474230:CDS
GTGCCTCGAGAGCTTAGGTC+AGG 0.532296 3_3:-77096021 Msa0474230:CDS
GAAGAGGGTTTCTGTGAGTG+TGG 0.532798 3_3:-77096459 Msa0474230:CDS
AAAAGTTCCAGAACCTTCCA+TGG 0.533472 3_3:+77096808 None:intergenic
CCCATGCCAAAGTTGGTCCA+GGG 0.533612 3_3:+77093337 None:intergenic
GGTGTTGGTGATGTAGGGTA+TGG 0.535016 3_3:-77096290 Msa0474230:CDS
GCCCTGGACCAACTTTGGCA+TGG 0.535051 3_3:-77093338 Msa0474230:three_prime_UTR
GATGCATGTACCAAGGAGAA+TGG 0.535617 3_3:-77096910 Msa0474230:CDS
TTGTGGCAATGATACATTGA+GGG 0.539553 3_3:-77095712 Msa0474230:CDS
ACTGTACATACAGTCAAAGA+TGG 0.540024 3_3:-77092909 Msa0474230:three_prime_UTR
AGTCCTTGTTATTCGATCGA+TGG 0.540552 3_3:-77096254 Msa0474230:CDS
TTGTGATATTGTTGATAATG+TGG 0.540603 3_3:-77096363 Msa0474230:CDS
TGCATACAAGTCACTACAAG+TGG 0.541017 3_3:-77093481 Msa0474230:CDS
TATTTCCACCTGAACACCAC+GGG 0.543557 3_3:+77095895 None:intergenic
CCATCAGGAGCTACTTATGA+AGG 0.545903 3_3:-77096848 Msa0474230:CDS
GAAAGGCAAAACTAAGATCA+AGG 0.546651 3_3:+77095088 None:intergenic
ATTTAATTCCAAGTTTGGAA+AGG 0.547839 3_3:-77093224 Msa0474230:three_prime_UTR
GCCGTCGACCACCGCGAACA+CGG 0.548092 3_3:-77097042 Msa0474230:CDS
GTTCGCGGTGGTCGACGGCA+TGG 0.548954 3_3:+77097046 None:intergenic
ATGGTGATGTGTATGAGGGT+TGG 0.549055 3_3:-77096706 Msa0474230:CDS
TGGACAAGGTTTCCTCCAGA+AGG 0.550122 3_3:-77095973 Msa0474230:CDS
TGGGAGAATGGTGTGCCAAA+AGG 0.551894 3_3:-77096545 Msa0474230:CDS
CTTGAAGAAGTCTGAAGTCA+AGG 0.551924 3_3:-77095619 Msa0474230:intron
GGGGAATGATGAGAAGAAGA+GGG 0.553675 3_3:-77096474 Msa0474230:CDS
ACAATATGAGAATTGAGCCC+TGG 0.553803 3_3:-77093354 Msa0474230:three_prime_UTR
GAAGTGGTTGTGTAATGGTT+GGG 0.553803 3_3:+77097407 None:intergenic
CCCTTACAAACAGTATAACC+AGG 0.555281 3_3:+77096218 None:intergenic
TGGAAATGTGGTGCTATATG+TGG 0.557863 3_3:-77096614 Msa0474230:CDS
GGAATGAGTATGTTGGTGAA+TGG 0.558164 3_3:-77096634 Msa0474230:CDS
AGCTCCCAAATACAAATCCT+AGG 0.558462 3_3:+77096410 None:intergenic
TTTGTGTGAGTGTAATGGAA+TGG 0.558797 3_3:+77097444 None:intergenic
AATGGAAGAAAGGTAAAGCA+TGG 0.560447 3_3:-77096892 Msa0474230:CDS
CCAAGACTGCTCCAGGCGAA+AGG 0.561092 3_3:+77095071 None:intergenic
ATAGCAAGCATGTAATCGGC+AGG 0.561196 3_3:+77095735 None:intergenic
TTTATTTCAGGGTCCATGGA+AGG 0.561312 3_3:-77096821 Msa0474230:CDS
TTCCACGTGAAATTTGGTAG+TGG 0.561420 3_3:+77097385 None:intergenic
AAAGTTTGAAGGAGTAGAGG+AGG 0.561682 3_3:+77097241 None:intergenic
CTGGCATGTTAATTCCCAGC+CGG 0.561746 3_3:+77093664 None:intergenic
ACGGCAAAGGTAAATACGTA+TGG 0.563043 3_3:-77096940 Msa0474230:CDS
ATCTCACCGCTACTCTCTGA+AGG 0.563905 3_3:+77093576 None:intergenic
TTGTATTTGGGAGCTTGATG+GGG 0.567064 3_3:-77096402 Msa0474230:CDS
AATGTGAATGCATGTGGAGT+GGG 0.567084 3_3:-77092965 Msa0474230:three_prime_UTR
TGTAATGGAATGGATTCATT+GGG 0.567179 3_3:+77097454 None:intergenic
GTTTACGCCTCCCCATCAAT+CGG 0.568425 3_3:-77095944 Msa0474230:CDS
ATTCCAAGTTTGGAAAGGAA+AGG 0.569109 3_3:-77093219 Msa0474230:three_prime_UTR
CAGAATGAGGGGTCCTCTGT+AGG 0.569312 3_3:+77092770 None:intergenic
TCAAAAGGAGATGATTTGCC+TGG 0.570822 3_3:-77092812 Msa0474230:three_prime_UTR
TCGTTGGTTACGAAATTCCT+GGG 0.571328 3_3:-77095378 Msa0474230:CDS
TAGCATCAGAATATATGAGC+TGG 0.574920 3_3:-77093301 Msa0474230:three_prime_UTR
ATGACACTCAGGACACGAGA+TGG 0.576124 3_3:-77094688 Msa0474230:CDS
CTGTGAGTTCCTGGAAGCAG+AGG 0.577302 3_3:-77094923 Msa0474230:CDS
CATTGTGTCAAACCTATTGG+AGG 0.578059 3_3:-77095351 Msa0474230:CDS
ACAATTTGCAAGATGGGGAA+GGG 0.579043 3_3:-77096676 Msa0474230:CDS
GGGAGAATGGTGTGCCAAAA+GGG 0.579856 3_3:-77096544 Msa0474230:CDS
GCTAAAGTTTGAAGGAGTAG+AGG 0.583173 3_3:+77097238 None:intergenic
ATGGAAGAAAGGTAAAGCAT+GGG 0.583487 3_3:-77096891 Msa0474230:CDS
CCACCTCATTCCATTTCCAA+AGG 0.583673 3_3:+77093154 None:intergenic
GTGTGTCCCCATGCCAAAGT+TGG 0.584056 3_3:+77093330 None:intergenic
GCGATGGGAGTGTTTCGTCC+GGG 0.585954 3_3:-77096502 Msa0474230:CDS
CTTTGGAAATGGAATGAGGT+GGG 0.587317 3_3:-77093153 Msa0474230:three_prime_UTR
ATACAAAAGCACAAGAAGCA+TGG 0.587829 3_3:+77092453 None:intergenic
GGATGATGGTTCTAAGAGTG+TGG 0.588270 3_3:-77096438 Msa0474230:CDS
CCTGGTTATACTGTTTGTAA+GGG 0.589835 3_3:-77096218 Msa0474230:CDS
AATTAACATGCCAGCAAGAG+CGG 0.589839 3_3:-77093655 Msa0474230:CDS
GGTAAATACGTATGGAACGA+TGG 0.590153 3_3:-77096932 Msa0474230:CDS
GTGAATGCATGTGGAGTGGG+AGG 0.593185 3_3:-77092962 Msa0474230:three_prime_UTR
GGAAGTGGTTGTGTAATGGT+TGG 0.594426 3_3:+77097406 None:intergenic
GACAACCGATAAACTCCGTA+AGG 0.596237 3_3:-77095139 Msa0474230:CDS
AATGGTGTGCCAAAAGGGAA+AGG 0.598736 3_3:-77096539 Msa0474230:CDS
GCTAGAAACTGACAGAATGA+GGG 0.600878 3_3:+77092758 None:intergenic
AGAGGACCTCTAATCCGGCT+GGG 0.601886 3_3:-77093678 Msa0474230:CDS
GAATCAGAGATTGGTGGTGT+TGG 0.602478 3_3:-77096311 Msa0474230:CDS
TTCTCAGTACAAGAACTCGT+TGG 0.608088 3_3:-77095394 Msa0474230:CDS
GATGGGGATGTTAAGAAACC+TGG 0.608944 3_3:-77096236 Msa0474230:CDS
CGAGATGGATACCCATAGGC+CGG 0.610897 3_3:-77094673 Msa0474230:intron
TAGCCTTTGGAAATGGAATG+AGG 0.613044 3_3:-77093157 Msa0474230:three_prime_UTR
TGGAAGAAAGGTAAAGCATG+GGG 0.615750 3_3:-77096890 Msa0474230:CDS
AAATCCACCGATTGATGGGG+AGG 0.615911 3_3:+77095937 None:intergenic
GCTAATGGTGATGTGTATGA+GGG 0.617886 3_3:-77096710 Msa0474230:CDS
TCTCACCGCTACTCTCTGAA+GGG 0.618386 3_3:+77093577 None:intergenic
GTGTTTCGTCCGGGAATTGG+GGG 0.618617 3_3:-77096493 Msa0474230:CDS
AAGAGCGCATACCGGCCTAT+GGG 0.618644 3_3:+77094662 None:intergenic
GGGTTTCTGATAGGAAACAT+GGG 0.619609 3_3:-77096751 Msa0474230:CDS
CCTTCATAAGTAGCTCCTGA+TGG 0.620490 3_3:+77096848 None:intergenic
TTTGGAAATGGAATGAGGTG+GGG 0.621319 3_3:-77093152 Msa0474230:three_prime_UTR
TGTGAGTTCCTGGAAGCAGA+GGG 0.621723 3_3:-77094922 Msa0474230:CDS
GGGAAGGGAGGTATATGTGG+AGG 0.626837 3_3:-77096661 Msa0474230:CDS
TCAAAGGTTCATCTCATGGT+CGG 0.627326 3_3:-77095161 Msa0474230:CDS
GGAGGGATTCAAATTTGACC+TGG 0.628638 3_3:-77092944 Msa0474230:three_prime_UTR
ACGTATTTACCTTTGCCGTG+TGG 0.632527 3_3:+77096944 None:intergenic
TCTCCTGACCTAAGCTCTCG+AGG 0.633465 3_3:+77096018 None:intergenic
AAGAATGGGAATCGTTATGT+GGG 0.637878 3_3:-77096572 Msa0474230:CDS
GACACGAGATGGATACCCAT+AGG 0.639932 3_3:-77094677 Msa0474230:CDS
TTTGTGGCAATGATACATTG+AGG 0.640401 3_3:-77095713 Msa0474230:CDS
GTTTGACACAATGAACTCCC+AGG 0.642986 3_3:+77095361 None:intergenic
AGGAATGGGAATGAGTATGT+TGG 0.643494 3_3:-77096641 Msa0474230:CDS
TACGCCTCCCCATCAATCGG+TGG 0.646074 3_3:-77095941 Msa0474230:CDS
CCTGGACCAACTTTGGCATG+GGG 0.647992 3_3:-77093336 Msa0474230:three_prime_UTR
CCTTTGGAAATGGAATGAGG+TGG 0.650625 3_3:-77093154 Msa0474230:three_prime_UTR
AGAAAGAAAAGTTCCTACAG+AGG 0.652469 3_3:-77092783 Msa0474230:three_prime_UTR
ATTTGCAAGATGGGGAAGGG+AGG 0.653215 3_3:-77096673 Msa0474230:CDS
TTTGTGGAGGACAAATAACA+TGG 0.653967 3_3:-77093387 Msa0474230:exon
TATGTTGGTGAATGGAAATG+TGG 0.655881 3_3:-77096626 Msa0474230:CDS
CATACACAGAATCTTTGTGG+AGG 0.658046 3_3:-77093400 Msa0474230:CDS
TTCCACTACCAAATTTCACG+TGG 0.658199 3_3:-77097387 Msa0474230:five_prime_UTR
CCAAACGGCGACGTATACAG+TGG 0.660988 3_3:-77096986 Msa0474230:CDS
CTAAAATCCACCGATTGATG+GGG 0.661133 3_3:+77095934 None:intergenic
CATGCAAAATGATGACACTC+AGG 0.664084 3_3:-77094699 Msa0474230:CDS
GGAAACACACCACACGGCAA+AGG 0.664480 3_3:-77096953 Msa0474230:CDS
AAATGTGAATGCATGTGGAG+TGG 0.667107 3_3:-77092966 Msa0474230:three_prime_UTR
GACACGCGCCGTGTTCGCGG+TGG 0.667971 3_3:+77097034 None:intergenic
GTAAACTTGGAACCTTCTGG+AGG 0.668383 3_3:+77095961 None:intergenic
TTATTTCCACCTGAACACCA+CGG 0.668462 3_3:+77095894 None:intergenic
TTATCAGGAAACACACCACA+CGG 0.669927 3_3:-77096959 Msa0474230:CDS
GAAACATGTTGATAGTAACT+GGG 0.673484 3_3:+77095414 None:intergenic
GAGGTACAATTTGCAAGATG+GGG 0.673630 3_3:-77096681 Msa0474230:CDS
CTAGAAACTGACAGAATGAG+GGG 0.676895 3_3:+77092759 None:intergenic
AACGATGGATGCATGTACCA+AGG 0.678792 3_3:-77096917 Msa0474230:CDS
GGAAGAAAGGTAAAGCATGG+GGG 0.686830 3_3:-77096889 Msa0474230:CDS
TGAATGCATGTGGAGTGGGA+GGG 0.690669 3_3:-77092961 Msa0474230:three_prime_UTR
CTCACCGCTACTCTCTGAAG+GGG 0.694466 3_3:+77093578 None:intergenic
ATGGAAAGACTACTGTCCCG+TGG 0.696500 3_3:-77095911 Msa0474230:CDS
CAACGGCTGAGATGGATGTG+GGG 0.698303 3_3:+77093457 None:intergenic
TCTACCCCTTCAGAGAGTAG+CGG 0.711188 3_3:-77093582 Msa0474230:CDS
GGAAGTGAATCAGAGATTGG+TGG 0.714127 3_3:-77096317 Msa0474230:CDS
TCCCCATCGATCGAATAACA+AGG 0.724583 3_3:+77096251 None:intergenic
GGTTTGGTATGTGAGAGCGA+TGG 0.727772 3_3:-77092480 Msa0474230:three_prime_UTR
TCCTTGTTATTCGATCGATG+GGG 0.734954 3_3:-77096252 Msa0474230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTAATTGAATTTAT+GGG + chr3_3:77092451-77092470 None:intergenic 10.0%
!!! TAAATTTTTATAATTTCAGA+AGG + chr3_3:77095172-77095191 None:intergenic 10.0%
!!! TTTTTTATTACTTTTTGTAA+TGG - chr3_3:77096735-77096754 Msa0474230:CDS 10.0%
!!! CTTTGATTTAATTGAATTTA+TGG + chr3_3:77092452-77092471 None:intergenic 15.0%
!! AGAAACATTATTAACTATTT+CGG - chr3_3:77092619-77092638 Msa0474230:three_prime_UTR 15.0%
!!! TATTAATGATGTTTGTATTT+TGG - chr3_3:77093936-77093955 Msa0474230:intron 15.0%
!! TAAAATGTAGCAATAAAAAA+TGG + chr3_3:77095380-77095399 None:intergenic 15.0%
!! TATGAAAAGATTATTCATTT+AGG - chr3_3:77095398-77095417 Msa0474230:CDS 15.0%
!! AAAAAAACTTACTATAACAT+TGG + chr3_3:77095737-77095756 None:intergenic 15.0%
!! TATTAAATATATGCATAGTT+AGG + chr3_3:77096028-77096047 None:intergenic 15.0%
!! TTCAAAAATATAAAGAAACT+TGG - chr3_3:77097339-77097358 Msa0474230:five_prime_UTR 15.0%
!!! ATTAGACATATATTTTGAAA+CGG + chr3_3:77097412-77097431 None:intergenic 15.0%
!! TATACATTAGTTAAAAAGTA+TGG + chr3_3:77097471-77097490 None:intergenic 15.0%
!!! TTTGTATTAGAGACATTTTT+GGG + chr3_3:77092422-77092441 None:intergenic 20.0%
!!! ATTTGTATTAGAGACATTTT+TGG + chr3_3:77092423-77092442 None:intergenic 20.0%
!! ATAATGTTTCTTGCATATTT+AGG + chr3_3:77092610-77092629 None:intergenic 20.0%
!! TTTGATTCTTAATCTTCAAT+TGG - chr3_3:77093576-77093595 Msa0474230:CDS 20.0%
!! TTGATTCTTAATCTTCAATT+GGG - chr3_3:77093577-77093596 Msa0474230:CDS 20.0%
!!! TTGGTTTATTTTTATGTGTT+TGG - chr3_3:77093650-77093669 Msa0474230:CDS 20.0%
!!! TTTTGTTTTAGATATTGTGT+TGG - chr3_3:77093699-77093718 Msa0474230:intron 20.0%
!!! TTTGTTTTAGATATTGTGTT+GGG - chr3_3:77093700-77093719 Msa0474230:intron 20.0%
!! AGAACAAATCAATAAATGAT+GGG + chr3_3:77095311-77095330 None:intergenic 20.0%
!! TAGAACAAATCAATAAATGA+TGG + chr3_3:77095312-77095331 None:intergenic 20.0%
!! TGTCAATATTTATATGTAAC+TGG + chr3_3:77095886-77095905 None:intergenic 20.0%
!!! TTTTGCTAATATCATAATCT+TGG + chr3_3:77096245-77096264 None:intergenic 20.0%
!! TTAACATTTAATTCCAAGTT+TGG - chr3_3:77096527-77096546 Msa0474230:CDS 20.0%
!!! TGTTTTTTGTTTTCATTTAG+AGG - chr3_3:77096647-77096666 Msa0474230:CDS 20.0%
!!! GTTTTTTGTTTTCATTTAGA+GGG - chr3_3:77096648-77096667 Msa0474230:CDS 20.0%
!!! ATTACTTTTTGTAATGGTTT+TGG - chr3_3:77096741-77096760 Msa0474230:CDS 20.0%
! GTTATCATTTAGTACATCTT+AGG - chr3_3:77092547-77092566 Msa0474230:three_prime_UTR 25.0%
!! TTTTCTTTGCATTTGTGTTT+TGG + chr3_3:77092655-77092674 None:intergenic 25.0%
!!! TATGAAGGTGATTTTATTTC+AGG - chr3_3:77092923-77092942 Msa0474230:three_prime_UTR 25.0%
!!! ATGAAGGTGATTTTATTTCA+GGG - chr3_3:77092924-77092943 Msa0474230:three_prime_UTR 25.0%
! TGATACTTATAAAGGTTCTT+GGG - chr3_3:77092985-77093004 Msa0474230:three_prime_UTR 25.0%
!! TTTTTCCTAGGATTTGTATT+TGG - chr3_3:77093341-77093360 Msa0474230:three_prime_UTR 25.0%
!! TTTTCCTAGGATTTGTATTT+GGG - chr3_3:77093342-77093361 Msa0474230:three_prime_UTR 25.0%
!!! TTGTGATATTGTTGATAATG+TGG - chr3_3:77093393-77093412 Msa0474230:CDS 25.0%
! TTAATCTTCAATTGGGTATT+AGG - chr3_3:77093584-77093603 Msa0474230:CDS 25.0%
! TGTTATCTACATTGTTAGTT+TGG - chr3_3:77093619-77093638 Msa0474230:CDS 25.0%
!!! TAATGATGTTTGTATTTTGG+TGG - chr3_3:77093939-77093958 Msa0474230:intron 25.0%
!!! AATGATGTTTGTATTTTGGT+GGG - chr3_3:77093940-77093959 Msa0474230:intron 25.0%
!!! TCAAGGTTTTGATTACAAAT+CGG + chr3_3:77094122-77094141 None:intergenic 25.0%
! TCTAGTAATTAATTAAGGCT+AGG + chr3_3:77094176-77094195 None:intergenic 25.0%
! TCCAGTCTAGTAATTAATTA+AGG + chr3_3:77094181-77094200 None:intergenic 25.0%
! TATAAAACCTATATTGAGCA+AGG - chr3_3:77094227-77094246 Msa0474230:intron 25.0%
! TTCAGTGCAAAATTTAAACT+AGG + chr3_3:77094448-77094467 None:intergenic 25.0%
! AATGAATACTTGTATTGCTA+TGG - chr3_3:77094500-77094519 Msa0474230:intron 25.0%
!! TTTTATGATGTTCTTAGAGT+TGG - chr3_3:77094771-77094790 Msa0474230:intron 25.0%
!! TTTTGTAATGATTTTTGCTC+AGG - chr3_3:77094796-77094815 Msa0474230:intron 25.0%
! TTAAAAGATTTGTGGGATTA+TGG - chr3_3:77095015-77095034 Msa0474230:intron 25.0%
! ACAACAAAAACAATCAGATA+CGG + chr3_3:77095130-77095149 None:intergenic 25.0%
! GACTAAATATGGAAAATTCA+AGG + chr3_3:77095211-77095230 None:intergenic 25.0%
! TAGAAATCAAAGTCACTTAT+GGG - chr3_3:77095330-77095349 Msa0474230:intron 25.0%
! TAAAAGTAAAAGAAATGACC+CGG + chr3_3:77095456-77095475 None:intergenic 25.0%
!! TTTTGCTTCTATTTGCATTA+TGG + chr3_3:77095520-77095539 None:intergenic 25.0%
!!! TCTGATGTAATCCTTTATTT+TGG - chr3_3:77096204-77096223 Msa0474230:CDS 25.0%
! ATATATTCTGATGCTAGTTA+AGG + chr3_3:77096451-77096470 None:intergenic 25.0%
! ATTTAATTCCAAGTTTGGAA+AGG - chr3_3:77096532-77096551 Msa0474230:CDS 25.0%
!! TAAATTTTTCTCATAGCCTT+TGG - chr3_3:77096586-77096605 Msa0474230:CDS 25.0%
!! ACGAATGAATTTTACATCTT+TGG - chr3_3:77096900-77096919 Msa0474230:CDS 25.0%
!!! TCATTATGCTTTTTCAAACT+TGG + chr3_3:77097160-77097179 None:intergenic 25.0%
! GATCAAAATTCAAAAAGCTA+AGG + chr3_3:77097378-77097397 None:intergenic 25.0%
! TGTAATGGAATGGATTCATT+GGG + chr3_3:77092305-77092324 None:intergenic 30.0%
! CTCACACAAACCAAAATTTT+AGG - chr3_3:77092325-77092344 Msa0474230:three_prime_UTR 30.0%
TACTAATTCCACGTGAAATT+TGG + chr3_3:77092380-77092399 None:intergenic 30.0%
GTGATACTTATAAAGGTTCT+TGG - chr3_3:77092984-77093003 Msa0474230:three_prime_UTR 30.0%
!!! GTGTTTTGATTTGGAAGAAT+GGG - chr3_3:77093170-77093189 Msa0474230:three_prime_UTR 30.0%
! GCTTGTATGTTTTATAGAGA+TGG - chr3_3:77093418-77093437 Msa0474230:CDS 30.0%
! CTACATTGTTAGTTTGGATT+TGG - chr3_3:77093625-77093644 Msa0474230:CDS 30.0%
! TGTTAGTTTGGATTTGGATT+TGG - chr3_3:77093631-77093650 Msa0474230:CDS 30.0%
! TGGCGTTTTTAATAAGATTG+TGG - chr3_3:77093670-77093689 Msa0474230:CDS 30.0%
! TGGTTGTTTGTTTCTTTGTT+GGG - chr3_3:77093963-77093982 Msa0474230:intron 30.0%
TGTTTCTTTGTTGGGTATTT+AGG - chr3_3:77093971-77093990 Msa0474230:intron 30.0%
ACAAATAGCAAGCATGTAAT+CGG + chr3_3:77094028-77094047 None:intergenic 30.0%
GCCTTAATTAATTACTAGAC+TGG - chr3_3:77094177-77094196 Msa0474230:intron 30.0%
AATTTCACCTTGCTCAATAT+AGG + chr3_3:77094237-77094256 None:intergenic 30.0%
!! GAAACATGTTGATAGTAACT+GGG + chr3_3:77094345-77094364 None:intergenic 30.0%
!! AGAAACATGTTGATAGTAAC+TGG + chr3_3:77094346-77094365 None:intergenic 30.0%
ACAGACTCGATTTATTGTAA+TGG - chr3_3:77094527-77094546 Msa0474230:intron 30.0%
CAGACTCGATTTATTGTAAT+GGG - chr3_3:77094528-77094547 Msa0474230:intron 30.0%
AATATCCTTACGGAGTTTAT+CGG + chr3_3:77094625-77094644 None:intergenic 30.0%
TAGTCTCATCAATATCCTTA+CGG + chr3_3:77094635-77094654 None:intergenic 30.0%
AGTGAAAGAAACTTTACACA+AGG + chr3_3:77094743-77094762 None:intergenic 30.0%
AGTAATCATCACGAAAATGA+AGG + chr3_3:77094887-77094906 None:intergenic 30.0%
! TTTTCGTGATGATTACTCAT+CGG - chr3_3:77094890-77094909 Msa0474230:CDS 30.0%
ATACCAGAACACAATTCATT+AGG + chr3_3:77094933-77094952 None:intergenic 30.0%
AATTCACATGAAAGGAAACA+TGG + chr3_3:77094980-77094999 None:intergenic 30.0%
! AAATCTTTTAACCCTTGGAT+CGG + chr3_3:77095006-77095025 None:intergenic 30.0%
!!! TTGTTTTTGTTGTTTCAGCT+TGG - chr3_3:77095137-77095156 Msa0474230:CDS 30.0%
!! TATCTCTTTGGGACTAAATA+TGG + chr3_3:77095222-77095241 None:intergenic 30.0%
TCCTCAAAACTTATCTCTTT+GGG + chr3_3:77095233-77095252 None:intergenic 30.0%
ATCCTCAAAACTTATCTCTT+TGG + chr3_3:77095234-77095253 None:intergenic 30.0%
!! TTTTGAGGATTTAGAAATGC+TGG - chr3_3:77095244-77095263 Msa0474230:intron 30.0%
!! CAAATCAATAAATGATGGGT+TGG + chr3_3:77095307-77095326 None:intergenic 30.0%
CTAGAAATCAAAGTCACTTA+TGG - chr3_3:77095329-77095348 Msa0474230:intron 30.0%
! TATTTCTACATGACTAGTAG+TGG + chr3_3:77095606-77095625 None:intergenic 30.0%
!!! GTTTTTTTGACAACAAATGC+TGG - chr3_3:77095749-77095768 Msa0474230:CDS 30.0%
! AACAAATAGCTTTACAGAGA+AGG + chr3_3:77095794-77095813 None:intergenic 30.0%
CAATGATATTGATAGAGCAA+TGG - chr3_3:77095820-77095839 Msa0474230:intron 30.0%
! TTTTAGTAATCCGTTTCTCT+TGG - chr3_3:77095976-77095995 Msa0474230:CDS 30.0%
TTTAGTAATCCGTTTCTCTT+GGG - chr3_3:77095977-77095996 Msa0474230:CDS 30.0%
TATGATTCTTGATATACCAG+AGG - chr3_3:77096060-77096079 Msa0474230:intron 30.0%
TGTCAATGATGCCAAAATAA+AGG + chr3_3:77096218-77096237 None:intergenic 30.0%
!!! AACCTTTTGGAATATAGCTT+GGG + chr3_3:77096327-77096346 None:intergenic 30.0%
!!! AAACCTTTTGGAATATAGCT+TGG + chr3_3:77096328-77096347 None:intergenic 30.0%
AGCTATATTCCAAAAGGTTT+AGG - chr3_3:77096328-77096347 Msa0474230:CDS 30.0%
GCTATATTCCAAAAGGTTTA+GGG - chr3_3:77096329-77096348 Msa0474230:CDS 30.0%
! TATGAAATCCCTAAACCTTT+TGG + chr3_3:77096340-77096359 None:intergenic 30.0%
TTTCATACACAGAATCTTTG+TGG - chr3_3:77096353-77096372 Msa0474230:CDS 30.0%
GAAGCCTTGCTTATTATTAT+TGG - chr3_3:77096559-77096578 Msa0474230:CDS 30.0%
!!! TTTTGTAATGGTTTTGGAGA+AGG - chr3_3:77096747-77096766 Msa0474230:CDS 30.0%
!!! TTTGTAATGGTTTTGGAGAA+GGG - chr3_3:77096748-77096767 Msa0474230:CDS 30.0%
TAGAAAAATGTGAATGCATG+TGG - chr3_3:77096785-77096804 Msa0474230:CDS 30.0%
ATACAGTCAAAGATGGATAA+TGG - chr3_3:77096854-77096873 Msa0474230:CDS 30.0%
TTTGGTCACGTAATATGAAT+CGG - chr3_3:77097255-77097274 Msa0474230:five_prime_UTR 30.0%
AGAAACTTGGCATAAAAGAT+AGG - chr3_3:77097352-77097371 Msa0474230:five_prime_UTR 30.0%
! GTGTAATGGAATGGATTCAT+TGG + chr3_3:77092306-77092325 None:intergenic 35.0%
! TTTGTGTGAGTGTAATGGAA+TGG + chr3_3:77092315-77092334 None:intergenic 35.0%
!! TTTGGTTTGTGTGAGTGTAA+TGG + chr3_3:77092320-77092339 None:intergenic 35.0%
! ATGGTTGGGACCTAAAATTT+TGG + chr3_3:77092338-77092357 None:intergenic 35.0%
ACATTGCTGCTAAAGTTTGA+AGG + chr3_3:77092529-77092548 None:intergenic 35.0%
!! TCTTTGCATTTGTGTTTTGG+TGG + chr3_3:77092652-77092671 None:intergenic 35.0%
CACAAATGCAAAGAAAAACG+AGG - chr3_3:77092658-77092677 Msa0474230:three_prime_UTR 35.0%
TGCAAAGAAAAACGAGGAAA+TGG - chr3_3:77092664-77092683 Msa0474230:three_prime_UTR 35.0%
!!! TTTGGAAGGTGTTTTTCTAC+TGG + chr3_3:77092755-77092774 None:intergenic 35.0%
GTAGAAAAACACCTTCCAAA+CGG - chr3_3:77092755-77092774 Msa0474230:three_prime_UTR 35.0%
GTATACAGTGGAAGTTTATC+AGG - chr3_3:77092782-77092801 Msa0474230:three_prime_UTR 35.0%
AATGGAAGAAAGGTAAAGCA+TGG - chr3_3:77092864-77092883 Msa0474230:three_prime_UTR 35.0%
ATGGAAGAAAGGTAAAGCAT+GGG - chr3_3:77092865-77092884 Msa0474230:three_prime_UTR 35.0%
!! TGATTTTATTTCAGGGTCCA+TGG - chr3_3:77092931-77092950 Msa0474230:three_prime_UTR 35.0%
GTGGAAGGTGATACTTATAA+AGG - chr3_3:77092977-77092996 Msa0474230:three_prime_UTR 35.0%
GGTGAGAAATGTTATGCTAA+TGG - chr3_3:77093031-77093050 Msa0474230:three_prime_UTR 35.0%
! TATGTTGGTGAATGGAAATG+TGG - chr3_3:77093130-77093149 Msa0474230:three_prime_UTR 35.0%
!!! GTGGAAATGGTGTTTTGATT+TGG - chr3_3:77093161-77093180 Msa0474230:three_prime_UTR 35.0%
!!! GGTGTTTTGATTTGGAAGAA+TGG - chr3_3:77093169-77093188 Msa0474230:three_prime_UTR 35.0%
AAGAATGGGAATCGTTATGT+GGG - chr3_3:77093184-77093203 Msa0474230:three_prime_UTR 35.0%
! GTAAAAACACCTTTCCCTTT+TGG + chr3_3:77093229-77093248 None:intergenic 35.0%
ATTTGTATTTGGGAGCTTGA+TGG - chr3_3:77093352-77093371 Msa0474230:three_prime_UTR 35.0%
TTTGTATTTGGGAGCTTGAT+GGG - chr3_3:77093353-77093372 Msa0474230:three_prime_UTR 35.0%
ACCTGGTTATACTGTTTGTA+AGG - chr3_3:77093537-77093556 Msa0474230:CDS 35.0%
CCTGGTTATACTGTTTGTAA+GGG - chr3_3:77093538-77093557 Msa0474230:CDS 35.0%
TTGATCCAAAGGAGAAATTC+TGG - chr3_3:77093763-77093782 Msa0474230:intron 35.0%
! TCTAAAATCCACCGATTGAT+GGG + chr3_3:77093826-77093845 None:intergenic 35.0%
! ATCTAAAATCCACCGATTGA+TGG + chr3_3:77093827-77093846 None:intergenic 35.0%
!! ATCAATCGGTGGATTTTAGA+TGG - chr3_3:77093826-77093845 Msa0474230:intron 35.0%
! GTGGTTGTTTGTTTCTTTGT+TGG - chr3_3:77093962-77093981 Msa0474230:intron 35.0%
TTGGGTATTTAGGCATTTGA+GGG - chr3_3:77093981-77094000 Msa0474230:intron 35.0%
!! GATTACATGCTTGCTATTTG+TGG - chr3_3:77094027-77094046 Msa0474230:intron 35.0%
TTTGTGGCAATGATACATTG+AGG - chr3_3:77094043-77094062 Msa0474230:intron 35.0%
TTGTGGCAATGATACATTGA+GGG - chr3_3:77094044-77094063 Msa0474230:intron 35.0%
CCAACTAATCATTGAAACAG+AGG + chr3_3:77094292-77094311 None:intergenic 35.0%
CCTCTGTTTCAATGATTAGT+TGG - chr3_3:77094289-77094308 Msa0474230:intron 35.0%
! CTGTTTCAATGATTAGTTGG+TGG - chr3_3:77094292-77094311 Msa0474230:intron 35.0%
GTTCATTGTGTCAAACCTAT+TGG - chr3_3:77094402-77094421 Msa0474230:intron 35.0%
!! AATGGGCAATGTGTTTTGTT+CGG - chr3_3:77094545-77094564 Msa0474230:intron 35.0%
GAAAGGCAAAACTAAGATCA+AGG + chr3_3:77094671-77094690 None:intergenic 35.0%
CTTGGTTTCAAGAGCTAAAA+TGG - chr3_3:77094703-77094722 Msa0474230:CDS 35.0%
!! ATGGACTACAGTTTTCTCAT+TGG - chr3_3:77094861-77094880 Msa0474230:CDS 35.0%
TCACCTAATGAATTGTGTTC+TGG - chr3_3:77094927-77094946 Msa0474230:CDS 35.0%
ATGAAAGGAAACATGGAACT+AGG + chr3_3:77094973-77094992 None:intergenic 35.0%
ATCGGACAAATTCACATGAA+AGG + chr3_3:77094988-77095007 None:intergenic 35.0%
TCCAAGGGTTAAAAGATTTG+TGG - chr3_3:77095007-77095026 Msa0474230:intron 35.0%
CCAAGGGTTAAAAGATTTGT+GGG - chr3_3:77095008-77095027 Msa0474230:intron 35.0%
! TCCCAAAGAGATAAGTTTTG+AGG - chr3_3:77095229-77095248 Msa0474230:intron 35.0%
TTATGGGAATGTGGAATTCA+TGG - chr3_3:77095346-77095365 Msa0474230:CDS 35.0%
TATGGGAATGTGGAATTCAT+GGG - chr3_3:77095347-77095366 Msa0474230:CDS 35.0%
TAGACTAAAGCTCAAGAACA+TGG + chr3_3:77095487-77095506 None:intergenic 35.0%
! TTCTTGAGCTTTAGTCTATC+TGG - chr3_3:77095489-77095508 Msa0474230:intron 35.0%
TGCTTCTATTTGCATTATGG+CGG + chr3_3:77095517-77095536 None:intergenic 35.0%
GTCATGTAGAAATAAAGCAG+TGG - chr3_3:77095612-77095631 Msa0474230:intron 35.0%
CTTCTAAATCACAGATAGAG+AGG + chr3_3:77095661-77095680 None:intergenic 35.0%
CATGACAAATCAAGTCATTG+TGG + chr3_3:77095713-77095732 None:intergenic 35.0%
!! CACAATGACTTGATTTGTCA+TGG - chr3_3:77095711-77095730 Msa0474230:CDS 35.0%
TGATATTGATAGAGCAATGG+TGG - chr3_3:77095823-77095842 Msa0474230:intron 35.0%
ATCCCAAGCTATATTCCAAA+AGG - chr3_3:77096322-77096341 Msa0474230:CDS 35.0%
TTTGTGGAGGACAAATAACA+TGG - chr3_3:77096369-77096388 Msa0474230:CDS 35.0%
TAGCATCAGAATATATGAGC+TGG - chr3_3:77096455-77096474 Msa0474230:CDS 35.0%
ATTCCAAGTTTGGAAAGGAA+AGG - chr3_3:77096537-77096556 Msa0474230:CDS 35.0%
GCCTTGCTTATTATTATTGG+TGG - chr3_3:77096562-77096581 Msa0474230:CDS 35.0%
GCCACCAATAATAATAAGCA+AGG + chr3_3:77096566-77096585 None:intergenic 35.0%
! TTTCTCATAGCCTTTGGAAA+TGG - chr3_3:77096592-77096611 Msa0474230:CDS 35.0%
TGTACATGCTATGCATCATA+AGG - chr3_3:77096697-77096716 Msa0474230:CDS 35.0%
! TTTGGAGAAGGGTATAGTAT+AGG - chr3_3:77096759-77096778 Msa0474230:CDS 35.0%
! TTGGAGAAGGGTATAGTATA+GGG - chr3_3:77096760-77096779 Msa0474230:CDS 35.0%
ACTGTACATACAGTCAAAGA+TGG - chr3_3:77096847-77096866 Msa0474230:CDS 35.0%
CATCTTTGGTTGCATTGAAT+TGG - chr3_3:77096914-77096933 Msa0474230:CDS 35.0%
TGAATTGGAGAGAGATCAAA+AGG - chr3_3:77096929-77096948 Msa0474230:CDS 35.0%
AGAAAGAAAAGTTCCTACAG+AGG - chr3_3:77096973-77096992 Msa0474230:CDS 35.0%
TCTGTTGTGTGCATTCAAAT+GGG - chr3_3:77097025-77097044 Msa0474230:CDS 35.0%
! AGAAAAGCACAAGAAAGAGT+TGG - chr3_3:77097093-77097112 Msa0474230:CDS 35.0%
! GAAAAGCACAAGAAAGAGTT+GGG - chr3_3:77097094-77097113 Msa0474230:CDS 35.0%
ACGCGACAAAGCAATAAATT+TGG - chr3_3:77097237-77097256 Msa0474230:five_prime_UTR 35.0%
TCACGTAATATGAATCGGTT+TGG - chr3_3:77097260-77097279 Msa0474230:five_prime_UTR 35.0%
! ATACAAAAGCACAAGAAGCA+TGG + chr3_3:77097306-77097325 None:intergenic 35.0%
GAAGTGGTTGTGTAATGGTT+GGG + chr3_3:77092352-77092371 None:intergenic 40.0%
TAGTGGAAGTGGTTGTGTAA+TGG + chr3_3:77092357-77092376 None:intergenic 40.0%
!! GTGAAATTTGGTAGTGGAAG+TGG + chr3_3:77092368-77092387 None:intergenic 40.0%
TTCCACTACCAAATTTCACG+TGG - chr3_3:77092369-77092388 Msa0474230:three_prime_UTR 40.0%
TTCCACGTGAAATTTGGTAG+TGG + chr3_3:77092374-77092393 None:intergenic 40.0%
!!! ATTTTTGGGTAGTAGTGAGG+TGG + chr3_3:77092408-77092427 None:intergenic 40.0%
!!! GACATTTTTGGGTAGTAGTG+AGG + chr3_3:77092411-77092430 None:intergenic 40.0%
AAAGTTTGAAGGAGTAGAGG+AGG + chr3_3:77092518-77092537 None:intergenic 40.0%
GCTAAAGTTTGAAGGAGTAG+AGG + chr3_3:77092521-77092540 None:intergenic 40.0%
!!! TTGCATTTGTGTTTTGGTGG+TGG + chr3_3:77092649-77092668 None:intergenic 40.0%
TTATCAGGAAACACACCACA+CGG - chr3_3:77092797-77092816 Msa0474230:three_prime_UTR 40.0%
ACGGCAAAGGTAAATACGTA+TGG - chr3_3:77092816-77092835 Msa0474230:three_prime_UTR 40.0%
GGTAAATACGTATGGAACGA+TGG - chr3_3:77092824-77092843 Msa0474230:three_prime_UTR 40.0%
TACCAAGGAGAATGGAAGAA+AGG - chr3_3:77092854-77092873 Msa0474230:three_prime_UTR 40.0%
TACCTTTCTTCCATTCTCCT+TGG + chr3_3:77092859-77092878 None:intergenic 40.0%
TGGAAGAAAGGTAAAGCATG+GGG - chr3_3:77092866-77092885 Msa0474230:three_prime_UTR 40.0%
TTTATTTCAGGGTCCATGGA+AGG - chr3_3:77092935-77092954 Msa0474230:three_prime_UTR 40.0%
AAAAGTTCCAGAACCTTCCA+TGG + chr3_3:77092951-77092970 None:intergenic 40.0%
!!! GAAGGTTCTGGAACTTTTGT+TGG - chr3_3:77092953-77092972 Msa0474230:three_prime_UTR 40.0%
!!! TTCTGGAACTTTTGTTGGTG+TGG - chr3_3:77092958-77092977 Msa0474230:three_prime_UTR 40.0%
AAGGTTCTTGGGTTTCTGAT+AGG - chr3_3:77092996-77093015 Msa0474230:three_prime_UTR 40.0%
TGGGTTTCTGATAGGAAACA+TGG - chr3_3:77093004-77093023 Msa0474230:three_prime_UTR 40.0%
GGGTTTCTGATAGGAAACAT+GGG - chr3_3:77093005-77093024 Msa0474230:three_prime_UTR 40.0%
TCTGATAGGAAACATGGGTT+TGG - chr3_3:77093010-77093029 Msa0474230:three_prime_UTR 40.0%
! TGCTAATGGTGATGTGTATG+AGG - chr3_3:77093045-77093064 Msa0474230:three_prime_UTR 40.0%
! GCTAATGGTGATGTGTATGA+GGG - chr3_3:77093046-77093065 Msa0474230:three_prime_UTR 40.0%
! TGGAGGTACAATTTGCAAGA+TGG - chr3_3:77093073-77093092 Msa0474230:three_prime_UTR 40.0%
! GGAGGTACAATTTGCAAGAT+GGG - chr3_3:77093074-77093093 Msa0474230:three_prime_UTR 40.0%
GAGGTACAATTTGCAAGATG+GGG - chr3_3:77093075-77093094 Msa0474230:three_prime_UTR 40.0%
TACAATTTGCAAGATGGGGA+AGG - chr3_3:77093079-77093098 Msa0474230:three_prime_UTR 40.0%
ACAATTTGCAAGATGGGGAA+GGG - chr3_3:77093080-77093099 Msa0474230:three_prime_UTR 40.0%
AGGAATGGGAATGAGTATGT+TGG - chr3_3:77093115-77093134 Msa0474230:three_prime_UTR 40.0%
! GGAATGAGTATGTTGGTGAA+TGG - chr3_3:77093122-77093141 Msa0474230:three_prime_UTR 40.0%
!! TGGAAATGTGGTGCTATATG+TGG - chr3_3:77093142-77093161 Msa0474230:three_prime_UTR 40.0%
!! TGTGGTGCTATATGTGGAAA+TGG - chr3_3:77093148-77093167 Msa0474230:three_prime_UTR 40.0%
GAAGAATGGGAATCGTTATG+TGG - chr3_3:77093183-77093202 Msa0474230:three_prime_UTR 40.0%
! GAATCGTTATGTGGGTTGTT+GGG - chr3_3:77093192-77093211 Msa0474230:three_prime_UTR 40.0%
!!! AAGGGAAAGGTGTTTTTACG+TGG - chr3_3:77093230-77093249 Msa0474230:three_prime_UTR 40.0%
!! CTAAGAGTGTGGTTTTTCCT+AGG - chr3_3:77093329-77093348 Msa0474230:three_prime_UTR 40.0%
AGCTCCCAAATACAAATCCT+AGG + chr3_3:77093349-77093368 None:intergenic 40.0%
TTGTATTTGGGAGCTTGATG+GGG - chr3_3:77093354-77093373 Msa0474230:three_prime_UTR 40.0%
GATGGAAGTGAATCAGAGAT+TGG - chr3_3:77093436-77093455 Msa0474230:CDS 40.0%
!! AGTCCTTGTTATTCGATCGA+TGG - chr3_3:77093502-77093521 Msa0474230:CDS 40.0%
!! GTCCTTGTTATTCGATCGAT+GGG - chr3_3:77093503-77093522 Msa0474230:CDS 40.0%
!! TCCTTGTTATTCGATCGATG+GGG - chr3_3:77093504-77093523 Msa0474230:CDS 40.0%
CCCTTACAAACAGTATAACC+AGG + chr3_3:77093541-77093560 None:intergenic 40.0%
!! GTCAGGAGATTTTGATCCAA+AGG - chr3_3:77093752-77093771 Msa0474230:intron 40.0%
CTTGTCCAGAATTTCTCCTT+TGG + chr3_3:77093771-77093790 None:intergenic 40.0%
CAAAGGAGAAATTCTGGACA+AGG - chr3_3:77093769-77093788 Msa0474230:intron 40.0%
! CTAAAATCCACCGATTGATG+GGG + chr3_3:77093825-77093844 None:intergenic 40.0%
TTATTTCCACCTGAACACCA+CGG + chr3_3:77093865-77093884 None:intergenic 40.0%
!!! GATGTTTGTATTTTGGTGGG+TGG - chr3_3:77093943-77093962 Msa0474230:intron 40.0%
GTTGGGTATTTAGGCATTTG+AGG - chr3_3:77093980-77093999 Msa0474230:intron 40.0%
ATGTCTTCTCCTGGAAAAAG+TGG - chr3_3:77094069-77094088 Msa0474230:intron 40.0%
!!! AAGAAGCTTCCACTTTTTCC+AGG + chr3_3:77094081-77094100 None:intergenic 40.0%
CAAATCGGTCATCTTGAGTA+AGG + chr3_3:77094107-77094126 None:intergenic 40.0%
CTTGACTTCAGACTTCTTCA+AGG + chr3_3:77094139-77094158 None:intergenic 40.0%
! CTTGAAGAAGTCTGAAGTCA+AGG - chr3_3:77094137-77094156 Msa0474230:intron 40.0%
TTCTCAGTACAAGAACTCGT+TGG - chr3_3:77094362-77094381 Msa0474230:intron 40.0%
! TCGTTGGTTACGAAATTCCT+GGG - chr3_3:77094378-77094397 Msa0474230:intron 40.0%
CATTGTGTCAAACCTATTGG+AGG - chr3_3:77094405-77094424 Msa0474230:intron 40.0%
! ACTAGGTAGTCCATACCTTT+TGG + chr3_3:77094431-77094450 None:intergenic 40.0%
CATAAGCGATTTGACCTCAA+AGG - chr3_3:77094579-77094598 Msa0474230:intron 40.0%
TCAAAGGTTCATCTCATGGT+CGG - chr3_3:77094595-77094614 Msa0474230:intron 40.0%
AAAGGAAACATGGAACTAGG+AGG + chr3_3:77094970-77094989 None:intergenic 40.0%
ATGTGAATTTGTCCGATCCA+AGG - chr3_3:77094991-77095010 Msa0474230:intron 40.0%
TGTGAATTTGTCCGATCCAA+GGG - chr3_3:77094992-77095011 Msa0474230:intron 40.0%
! CCCACAAATCTTTTAACCCT+TGG + chr3_3:77095011-77095030 None:intergenic 40.0%
! TGTGGGATTATGGTTTTTGC+AGG - chr3_3:77095025-77095044 Msa0474230:intron 40.0%
CATGCAAAATGATGACACTC+AGG - chr3_3:77095057-77095076 Msa0474230:CDS 40.0%
! ATAAAGTGAAGAGCGCATAC+CGG + chr3_3:77095105-77095124 None:intergenic 40.0%
AGGATTTAGAAATGCTGGTG+CGG - chr3_3:77095249-77095268 Msa0474230:intron 40.0%
CAAAGTCACTTATGGGAATG+TGG - chr3_3:77095337-77095356 Msa0474230:intron 40.0%
AATGTGGAATTCATGGGACA+TGG - chr3_3:77095353-77095372 Msa0474230:CDS 40.0%
AAGTAAAAGAAATGACCCGG+TGG + chr3_3:77095453-77095472 None:intergenic 40.0%
GCTTCTATTTGCATTATGGC+GGG + chr3_3:77095516-77095535 None:intergenic 40.0%
CCAATATTGCAAGTTTAGGG+TGG + chr3_3:77095548-77095567 None:intergenic 40.0%
CCACCCTAAACTTGCAATAT+TGG - chr3_3:77095545-77095564 Msa0474230:intron 40.0%
GGGCCAATATTGCAAGTTTA+GGG + chr3_3:77095551-77095570 None:intergenic 40.0%
TGGGCCAATATTGCAAGTTT+AGG + chr3_3:77095552-77095571 None:intergenic 40.0%
AAATCACAGATAGAGAGGAC+TGG + chr3_3:77095656-77095675 None:intergenic 40.0%
! TATGCTCCTGTTTGTTGAGA+TGG - chr3_3:77095686-77095705 Msa0474230:CDS 40.0%
TTTGACAACAAATGCTGGAG+TGG - chr3_3:77095754-77095773 Msa0474230:CDS 40.0%
ATTGATAGAGCAATGGTGGT+TGG - chr3_3:77095827-77095846 Msa0474230:intron 40.0%
AATTAACATGCCAGCAAGAG+CGG - chr3_3:77096101-77096120 Msa0474230:intron 40.0%
TGCATACAAGTCACTACAAG+TGG - chr3_3:77096275-77096294 Msa0474230:CDS 40.0%
GGAATATAGCTTGGGATCAA+CGG + chr3_3:77096319-77096338 None:intergenic 40.0%
CATACACAGAATCTTTGTGG+AGG - chr3_3:77096356-77096375 Msa0474230:CDS 40.0%
TGGAGGACAAATAACATGGT+TGG - chr3_3:77096373-77096392 Msa0474230:CDS 40.0%
ACAATATGAGAATTGAGCCC+TGG - chr3_3:77096402-77096421 Msa0474230:CDS 40.0%
CTTCCTTTCCTTTCCAAACT+TGG + chr3_3:77096543-77096562 None:intergenic 40.0%
! TAGCCTTTGGAAATGGAATG+AGG - chr3_3:77096599-77096618 Msa0474230:CDS 40.0%
! CTTTGGAAATGGAATGAGGT+GGG - chr3_3:77096603-77096622 Msa0474230:CDS 40.0%
TTTGGAAATGGAATGAGGTG+GGG - chr3_3:77096604-77096623 Msa0474230:CDS 40.0%
AAATGTGAATGCATGTGGAG+TGG - chr3_3:77096790-77096809 Msa0474230:CDS 40.0%
AATGTGAATGCATGTGGAGT+GGG - chr3_3:77096791-77096810 Msa0474230:CDS 40.0%
GGATTCAAATTTGACCTGGT+GGG - chr3_3:77096816-77096835 Msa0474230:CDS 40.0%
GATTCAAATTTGACCTGGTG+GGG - chr3_3:77096817-77096836 Msa0474230:CDS 40.0%
ATTCAAATTTGACCTGGTGG+GGG - chr3_3:77096818-77096837 Msa0474230:CDS 40.0%
! TCAAAAGGAGATGATTTGCC+TGG - chr3_3:77096944-77096963 Msa0474230:CDS 40.0%
! ACTTTTCTTTCTTGCTCACC+AGG + chr3_3:77096965-77096984 None:intergenic 40.0%
CTAGAAACTGACAGAATGAG+GGG + chr3_3:77097000-77097019 None:intergenic 40.0%
GCTAGAAACTGACAGAATGA+GGG + chr3_3:77097001-77097020 None:intergenic 40.0%
AGCTAGAAACTGACAGAATG+AGG + chr3_3:77097002-77097021 None:intergenic 40.0%
CTCTGTTGTGTGCATTCAAA+TGG - chr3_3:77097024-77097043 Msa0474230:CDS 40.0%
GAAAGAGTTGGGTGTTTCTT+TGG - chr3_3:77097105-77097124 Msa0474230:CDS 40.0%
!! TTGTCGCGTTGATTGTTTCT+TGG + chr3_3:77097226-77097245 None:intergenic 40.0%
GGAAGTGGTTGTGTAATGGT+TGG + chr3_3:77092353-77092372 None:intergenic 45.0%
! AGGTGTTTTTCTACTGGCGT+CGG + chr3_3:77092749-77092768 None:intergenic 45.0%
ACGTATTTACCTTTGCCGTG+TGG + chr3_3:77092815-77092834 None:intergenic 45.0%
AACGATGGATGCATGTACCA+AGG - chr3_3:77092839-77092858 Msa0474230:three_prime_UTR 45.0%
GATGCATGTACCAAGGAGAA+TGG - chr3_3:77092846-77092865 Msa0474230:three_prime_UTR 45.0%
GGAAGAAAGGTAAAGCATGG+GGG - chr3_3:77092867-77092886 Msa0474230:three_prime_UTR 45.0%
AAAGGTAAAGCATGGGGGAA+AGG - chr3_3:77092872-77092891 Msa0474230:three_prime_UTR 45.0%
AAGGTAAAGCATGGGGGAAA+GGG - chr3_3:77092873-77092892 Msa0474230:three_prime_UTR 45.0%
CCTTCATAAGTAGCTCCTGA+TGG + chr3_3:77092911-77092930 None:intergenic 45.0%
CCATCAGGAGCTACTTATGA+AGG - chr3_3:77092908-77092927 Msa0474230:three_prime_UTR 45.0%
! GGAACTTTTGTTGGTGTGGA+AGG - chr3_3:77092962-77092981 Msa0474230:three_prime_UTR 45.0%
! ATGGTGATGTGTATGAGGGT+TGG - chr3_3:77093050-77093069 Msa0474230:three_prime_UTR 45.0%
! GGAGGTATATGTGGAGGAAT+GGG - chr3_3:77093101-77093120 Msa0474230:three_prime_UTR 45.0%
! GGAATCGTTATGTGGGTTGT+TGG - chr3_3:77093191-77093210 Msa0474230:three_prime_UTR 45.0%
! TATGTGGGTTGTTGGGAGAA+TGG - chr3_3:77093199-77093218 Msa0474230:three_prime_UTR 45.0%
AATGGTGTGCCAAAAGGGAA+AGG - chr3_3:77093217-77093236 Msa0474230:three_prime_UTR 45.0%
GGGGAATGATGAGAAGAAGA+GGG - chr3_3:77093282-77093301 Msa0474230:three_prime_UTR 45.0%
GTTTCTGTGAGTGTGGATGA+TGG - chr3_3:77093304-77093323 Msa0474230:three_prime_UTR 45.0%
!! GGATGATGGTTCTAAGAGTG+TGG - chr3_3:77093318-77093337 Msa0474230:three_prime_UTR 45.0%
GGAAGTGAATCAGAGATTGG+TGG - chr3_3:77093439-77093458 Msa0474230:CDS 45.0%
!! GAATCAGAGATTGGTGGTGT+TGG - chr3_3:77093445-77093464 Msa0474230:CDS 45.0%
!! GTGTTGGTGTTGGTGATGTA+GGG - chr3_3:77093461-77093480 Msa0474230:CDS 45.0%
TCCCCATCGATCGAATAACA+AGG + chr3_3:77093508-77093527 None:intergenic 45.0%
GATGGGGATGTTAAGAAACC+TGG - chr3_3:77093520-77093539 Msa0474230:CDS 45.0%
! TTGTGTTGGGAAGCATGCTT+CGG - chr3_3:77093713-77093732 Msa0474230:intron 45.0%
GTAAACTTGGAACCTTCTGG+AGG + chr3_3:77093798-77093817 None:intergenic 45.0%
TATTTCCACCTGAACACCAC+GGG + chr3_3:77093864-77093883 None:intergenic 45.0%
ATAGCAAGCATGTAATCGGC+AGG + chr3_3:77094024-77094043 None:intergenic 45.0%
TTGAGGGAAATGTCTTCTCC+TGG - chr3_3:77094060-77094079 Msa0474230:intron 45.0%
! CTCGTTGGTTACGAAATTCC+TGG - chr3_3:77094377-77094396 Msa0474230:intron 45.0%
GTTTGACACAATGAACTCCC+AGG + chr3_3:77094398-77094417 None:intergenic 45.0%
CAAACCTATTGGAGGCCAAA+AGG - chr3_3:77094413-77094432 Msa0474230:intron 45.0%
! CATACCTTTTGGCCTCCAAT+AGG + chr3_3:77094420-77094439 None:intergenic 45.0%
CTATTGGAGGCCAAAAGGTA+TGG - chr3_3:77094418-77094437 Msa0474230:intron 45.0%
GACCTCAAAGGTTCATCTCA+TGG - chr3_3:77094591-77094610 Msa0474230:intron 45.0%
GACCATGAGATGAACCTTTG+AGG + chr3_3:77094596-77094615 None:intergenic 45.0%
GACAACCGATAAACTCCGTA+AGG - chr3_3:77094617-77094636 Msa0474230:intron 45.0%
!!! TCTTAGTTTTGCCTTTCGCC+TGG - chr3_3:77094674-77094693 Msa0474230:CDS 45.0%
TGATAGAGACTGTGAGTTCC+TGG - chr3_3:77094824-77094843 Msa0474230:intron 45.0%
TCTCTTCTGCTTTCATCCAC+CGG - chr3_3:77095434-77095453 Msa0474230:CDS 45.0%
! TTTGCTACTTGCATGCGCAT+GGG + chr3_3:77095571-77095590 None:intergenic 45.0%
TGTGGTCCATCTCAACAAAC+AGG + chr3_3:77095695-77095714 None:intergenic 45.0%
ATAGAGCAATGGTGGTTGGT+AGG - chr3_3:77095831-77095850 Msa0474230:intron 45.0%
GAAAGAGAGCCCAAGAGAAA+CGG + chr3_3:77095989-77096008 None:intergenic 45.0%
ATACCAGAGGACCTCTAATC+CGG - chr3_3:77096073-77096092 Msa0474230:intron 45.0%
! TTAATTCCCAGCCGGATTAG+AGG + chr3_3:77096087-77096106 None:intergenic 45.0%
! GAGAGTGTGTAAAGCTGGAT+TGG - chr3_3:77096125-77096144 Msa0474230:intron 45.0%
CCACCTCATTCCATTTCCAA+AGG + chr3_3:77096605-77096624 None:intergenic 45.0%
! CCTTTGGAAATGGAATGAGG+TGG - chr3_3:77096602-77096621 Msa0474230:CDS 45.0%
TTGGAAATGGAATGAGGTGG+GGG - chr3_3:77096605-77096624 Msa0474230:CDS 45.0%
GGAGGGATTCAAATTTGACC+TGG - chr3_3:77096812-77096831 Msa0474230:CDS 45.0%
GGGATTCAAATTTGACCTGG+TGG - chr3_3:77096815-77096834 Msa0474230:CDS 45.0%
GTTTGAAGGAGTAGAGGAGG+AGG + chr3_3:77092515-77092534 None:intergenic 50.0%
TGTATACGTCGCCGTTTGGA+AGG + chr3_3:77092769-77092788 None:intergenic 50.0%
GGGGGAAAGGGAAATTCTCA+TGG - chr3_3:77092885-77092904 Msa0474230:three_prime_UTR 50.0%
GGGAAATTCTCATGGCCATC+AGG - chr3_3:77092893-77092912 Msa0474230:three_prime_UTR 50.0%
GTGATGTGTATGAGGGTTGG+TGG - chr3_3:77093053-77093072 Msa0474230:three_prime_UTR 50.0%
!! ATGTGTATGAGGGTTGGTGG+AGG - chr3_3:77093056-77093075 Msa0474230:three_prime_UTR 50.0%
ATTTGCAAGATGGGGAAGGG+AGG - chr3_3:77093083-77093102 Msa0474230:three_prime_UTR 50.0%
! ATGGGGAAGGGAGGTATATG+TGG - chr3_3:77093092-77093111 Msa0474230:three_prime_UTR 50.0%
! GGGAGGTATATGTGGAGGAA+TGG - chr3_3:77093100-77093119 Msa0474230:three_prime_UTR 50.0%
TGGGAGAATGGTGTGCCAAA+AGG - chr3_3:77093211-77093230 Msa0474230:three_prime_UTR 50.0%
GGGAGAATGGTGTGCCAAAA+GGG - chr3_3:77093212-77093231 Msa0474230:three_prime_UTR 50.0%
!! GTGTTTTTACGTGGCGCGAT+GGG - chr3_3:77093239-77093258 Msa0474230:three_prime_UTR 50.0%
GAGTGTTTCGTCCGGGAATT+GGG - chr3_3:77093261-77093280 Msa0474230:three_prime_UTR 50.0%
AGTGTTTCGTCCGGGAATTG+GGG - chr3_3:77093262-77093281 Msa0474230:three_prime_UTR 50.0%
CTCATCATTCCCCCAATTCC+CGG + chr3_3:77093275-77093294 None:intergenic 50.0%
GGGGGAATGATGAGAAGAAG+AGG - chr3_3:77093281-77093300 Msa0474230:three_prime_UTR 50.0%
GAAGAGGGTTTCTGTGAGTG+TGG - chr3_3:77093297-77093316 Msa0474230:three_prime_UTR 50.0%
!! GAGATTGGTGGTGTTGGTGT+TGG - chr3_3:77093451-77093470 Msa0474230:CDS 50.0%
!! GGTGTTGGTGTTGGTGATGT+AGG - chr3_3:77093460-77093479 Msa0474230:CDS 50.0%
!! GGTGTTGGTGATGTAGGGTA+TGG - chr3_3:77093466-77093485 Msa0474230:CDS 50.0%
TGGACAAGGTTTCCTCCAGA+AGG - chr3_3:77093783-77093802 Msa0474230:intron 50.0%
GGCGTAAACTTGGAACCTTC+TGG + chr3_3:77093801-77093820 None:intergenic 50.0%
! TTGATGGGGAGGCGTAAACT+TGG + chr3_3:77093811-77093830 None:intergenic 50.0%
GTTTACGCCTCCCCATCAAT+CGG - chr3_3:77093812-77093831 Msa0474230:intron 50.0%
! AAATCCACCGATTGATGGGG+AGG + chr3_3:77093822-77093841 None:intergenic 50.0%
ATGGAAAGACTACTGTCCCG+TGG - chr3_3:77093845-77093864 Msa0474230:intron 50.0%
!! GATTAGTTGGTGGCCATGTC+AGG - chr3_3:77094302-77094321 Msa0474230:intron 50.0%
ATCCTGATGAGCACCTGACA+TGG + chr3_3:77094318-77094337 None:intergenic 50.0%
CTTGAAACCAAGACTGCTCC+AGG + chr3_3:77094695-77094714 None:intergenic 50.0%
TGTGAGTTCCTGGAAGCAGA+GGG - chr3_3:77094834-77094853 Msa0474230:CDS 50.0%
CCATTATTCCCTCTGCTTCC+AGG + chr3_3:77094845-77094864 None:intergenic 50.0%
CCTGGAAGCAGAGGGAATAA+TGG - chr3_3:77094842-77094861 Msa0474230:CDS 50.0%
ATGACACTCAGGACACGAGA+TGG - chr3_3:77095068-77095087 Msa0474230:CDS 50.0%
GACACGAGATGGATACCCAT+AGG - chr3_3:77095079-77095098 Msa0474230:CDS 50.0%
CTCTTCTGCTTTCATCCACC+GGG - chr3_3:77095435-77095454 Msa0474230:CDS 50.0%
! CTTTGCTACTTGCATGCGCA+TGG + chr3_3:77095572-77095591 None:intergenic 50.0%
TGCGCATGCAAGTAGCAAAG+AGG - chr3_3:77095572-77095591 Msa0474230:intron 50.0%
GCGCATGCAAGTAGCAAAGA+GGG - chr3_3:77095573-77095592 Msa0474230:intron 50.0%
!! ATGGTGGTTGGTAGGACTTG+AGG - chr3_3:77095839-77095858 Msa0474230:intron 50.0%
! GTTGGTAGGACTTGAGGCTT+AGG - chr3_3:77095845-77095864 Msa0474230:intron 50.0%
CTGGCATGTTAATTCCCAGC+CGG + chr3_3:77096095-77096114 None:intergenic 50.0%
GGATTGGATCAGCAGCAAAC+TGG - chr3_3:77096141-77096160 Msa0474230:intron 50.0%
TCTACCCCTTCAGAGAGTAG+CGG - chr3_3:77096174-77096193 Msa0474230:CDS 50.0%
TCTCACCGCTACTCTCTGAA+GGG + chr3_3:77096182-77096201 None:intergenic 50.0%
ATCTCACCGCTACTCTCTGA+AGG + chr3_3:77096183-77096202 None:intergenic 50.0%
TCAACGGCTGAGATGGATGT+GGG + chr3_3:77096303-77096322 None:intergenic 50.0%
ATCAACGGCTGAGATGGATG+TGG + chr3_3:77096304-77096323 None:intergenic 50.0%
ATTGAGCCCTGGACCAACTT+TGG - chr3_3:77096413-77096432 Msa0474230:CDS 50.0%
TGAATGCATGTGGAGTGGGA+GGG - chr3_3:77096795-77096814 Msa0474230:CDS 50.0%
TACAGTTATTTGCCCCCACC+AGG + chr3_3:77096833-77096852 None:intergenic 50.0%
! GGTTTGGTATGTGAGAGCGA+TGG - chr3_3:77097276-77097295 Msa0474230:five_prime_UTR 50.0%
TGAAGGAGTAGAGGAGGAGG+AGG + chr3_3:77092512-77092531 None:intergenic 55.0%
CCACTGTATACGTCGCCGTT+TGG + chr3_3:77092773-77092792 None:intergenic 55.0%
CCAAACGGCGACGTATACAG+TGG - chr3_3:77092770-77092789 Msa0474230:three_prime_UTR 55.0%
GGAAACACACCACACGGCAA+AGG - chr3_3:77092803-77092822 Msa0474230:three_prime_UTR 55.0%
TCAGGGTCCATGGAAGGTTC+TGG - chr3_3:77092941-77092960 Msa0474230:three_prime_UTR 55.0%
! GGGAAGGGAGGTATATGTGG+AGG - chr3_3:77093095-77093114 Msa0474230:three_prime_UTR 55.0%
!! GGTGTTTTTACGTGGCGCGA+TGG - chr3_3:77093238-77093257 Msa0474230:three_prime_UTR 55.0%
! GGAGTGTTTCGTCCGGGAAT+TGG - chr3_3:77093260-77093279 Msa0474230:three_prime_UTR 55.0%
GTGTTTCGTCCGGGAATTGG+GGG - chr3_3:77093263-77093282 Msa0474230:three_prime_UTR 55.0%
TCTCCTGACCTAAGCTCTCG+AGG + chr3_3:77093741-77093760 None:intergenic 55.0%
ACTACTGTCCCGTGGTGTTC+AGG - chr3_3:77093853-77093872 Msa0474230:intron 55.0%
CTGTGAGTTCCTGGAAGCAG+AGG - chr3_3:77094833-77094852 Msa0474230:CDS 55.0%
CGAGATGGATACCCATAGGC+CGG - chr3_3:77095083-77095102 Msa0474230:CDS 55.0%
! AAGAGCGCATACCGGCCTAT+GGG + chr3_3:77095097-77095116 None:intergenic 55.0%
AGAGGACCTCTAATCCGGCT+GGG - chr3_3:77096078-77096097 Msa0474230:intron 55.0%
! GCGGAGAGAGTGTGTAAAGC+TGG - chr3_3:77096120-77096139 Msa0474230:intron 55.0%
! CTCACCGCTACTCTCTGAAG+GGG + chr3_3:77096181-77096200 None:intergenic 55.0%
CAACGGCTGAGATGGATGTG+GGG + chr3_3:77096302-77096321 None:intergenic 55.0%
CTTGGGATCAACGGCTGAGA+TGG + chr3_3:77096310-77096329 None:intergenic 55.0%
! CCCATGCCAAAGTTGGTCCA+GGG + chr3_3:77096422-77096441 None:intergenic 55.0%
CCCTGGACCAACTTTGGCAT+GGG - chr3_3:77096419-77096438 Msa0474230:CDS 55.0%
CCTGGACCAACTTTGGCATG+GGG - chr3_3:77096420-77096439 Msa0474230:CDS 55.0%
GTGTGTCCCCATGCCAAAGT+TGG + chr3_3:77096429-77096448 None:intergenic 55.0%
GGGGGACATCAGACATGACA+AGG - chr3_3:77096623-77096642 Msa0474230:CDS 55.0%
GTGAATGCATGTGGAGTGGG+AGG - chr3_3:77096794-77096813 Msa0474230:CDS 55.0%
CAGAATGAGGGGTCCTCTGT+AGG + chr3_3:77096989-77097008 None:intergenic 55.0%
AGTAGAGGAGGAGGAGGAGG+AGG + chr3_3:77092506-77092525 None:intergenic 60.0%
AGGAGTAGAGGAGGAGGAGG+AGG + chr3_3:77092509-77092528 None:intergenic 60.0%
!! CGCGATGGGAGTGTTTCGTC+CGG - chr3_3:77093253-77093272 Msa0474230:three_prime_UTR 60.0%
!! GCGATGGGAGTGTTTCGTCC+GGG - chr3_3:77093254-77093273 Msa0474230:three_prime_UTR 60.0%
TGGGAGCTTGATGGGGAAGC+TGG - chr3_3:77093361-77093380 Msa0474230:three_prime_UTR 60.0%
!! CTTCGGTGCCTCGAGAGCTT+AGG - chr3_3:77093730-77093749 Msa0474230:intron 60.0%
GTGCCTCGAGAGCTTAGGTC+AGG - chr3_3:77093735-77093754 Msa0474230:intron 60.0%
TACGCCTCCCCATCAATCGG+TGG - chr3_3:77093815-77093834 Msa0474230:intron 60.0%
ACTGTCCCGTGGTGTTCAGG+TGG - chr3_3:77093856-77093875 Msa0474230:intron 60.0%
GGCCATGTCAGGTGCTCATC+AGG - chr3_3:77094313-77094332 Msa0474230:intron 60.0%
CCAAGACTGCTCCAGGCGAA+AGG + chr3_3:77094688-77094707 None:intergenic 60.0%
CCTTTCGCCTGGAGCAGTCT+TGG - chr3_3:77094685-77094704 Msa0474230:CDS 60.0%
! GAAGAGCGCATACCGGCCTA+TGG + chr3_3:77095098-77095117 None:intergenic 60.0%
! CAGCCGGATTAGAGGTCCTC+TGG + chr3_3:77096079-77096098 None:intergenic 60.0%
CAGAGGACCTCTAATCCGGC+TGG - chr3_3:77096077-77096096 Msa0474230:intron 60.0%
CACACTCTCTCCGCTCTTGC+TGG + chr3_3:77096114-77096133 None:intergenic 60.0%
GCCCTGGACCAACTTTGGCA+TGG - chr3_3:77096418-77096437 Msa0474230:CDS 60.0%
! CCCCATGCCAAAGTTGGTCC+AGG + chr3_3:77096423-77096442 None:intergenic 60.0%
AGAGGAGGAGGAGGAGGAGG+AGG + chr3_3:77092503-77092522 None:intergenic 65.0%
GTTCGCGGTGGTCGACGGCA+TGG + chr3_3:77092713-77092732 None:intergenic 70.0%
GCCGTCGACCACCGCGAACA+CGG - chr3_3:77092714-77092733 Msa0474230:three_prime_UTR 70.0%
GCCGTGTTCGCGGTGGTCGA+CGG + chr3_3:77092718-77092737 None:intergenic 70.0%
GGTGACACGCGCCGTGTTCG+CGG + chr3_3:77092728-77092747 None:intergenic 70.0%
GACACGCGCCGTGTTCGCGG+TGG + chr3_3:77092725-77092744 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 77092277 77097501 77092277 ID=Msa0474230;Name=Msa0474230
chr3_3 mRNA 77092277 77097501 77092277 ID=Msa0474230-mRNA-1;Parent=Msa0474230;Name=Msa0474230-mRNA-1;_AED=0.07;_eAED=0.07;_QI=337|1|1|1|1|1|8|1115|707
chr3_3 exon 77092277 77093698 77092277 ID=Msa0474230-mRNA-1:exon:20520;Parent=Msa0474230-mRNA-1
chr3_3 exon 77094674 77094731 77094674 ID=Msa0474230-mRNA-1:exon:20519;Parent=Msa0474230-mRNA-1
chr3_3 exon 77094830 77094960 77094830 ID=Msa0474230-mRNA-1:exon:20518;Parent=Msa0474230-mRNA-1
chr3_3 exon 77095054 77095247 77095054 ID=Msa0474230-mRNA-1:exon:20517;Parent=Msa0474230-mRNA-1
chr3_3 exon 77095344 77095454 77095344 ID=Msa0474230-mRNA-1:exon:20516;Parent=Msa0474230-mRNA-1
chr3_3 exon 77095620 77095785 77095620 ID=Msa0474230-mRNA-1:exon:20515;Parent=Msa0474230-mRNA-1
chr3_3 exon 77095904 77096068 77095904 ID=Msa0474230-mRNA-1:exon:20514;Parent=Msa0474230-mRNA-1
chr3_3 exon 77096173 77097501 77096173 ID=Msa0474230-mRNA-1:exon:20513;Parent=Msa0474230-mRNA-1
chr3_3 five_prime_UTR 77097165 77097501 77097165 ID=Msa0474230-mRNA-1:five_prime_utr;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77096173 77097164 77096173 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77095904 77096068 77095904 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77095620 77095785 77095620 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77095344 77095454 77095344 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77095054 77095247 77095054 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77094830 77094960 77094830 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77094674 77094731 77094674 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 CDS 77093392 77093698 77093392 ID=Msa0474230-mRNA-1:cds;Parent=Msa0474230-mRNA-1
chr3_3 three_prime_UTR 77092277 77093391 77092277 ID=Msa0474230-mRNA-1:three_prime_utr;Parent=Msa0474230-mRNA-1
Gene Sequence

>Msa0474230

ATGCAAGAAACATTATTAACTATTTCGGAGCACCACCACCAAAACACAAATGCAAAGAAAAACGAGGAAATGGAAGTAGTAATAGTATCATCATCACCATGCCGTCGACCACCGCGAACACGGCGCGTGTCACCGACGCCAGTAGAAAAACACCTTCCAAACGGCGACGTATACAGTGGAAGTTTATCAGGAAACACACCACACGGCAAAGGTAAATACGTATGGAACGATGGATGCATGTACCAAGGAGAATGGAAGAAAGGTAAAGCATGGGGGAAAGGGAAATTCTCATGGCCATCAGGAGCTACTTATGAAGGTGATTTTATTTCAGGGTCCATGGAAGGTTCTGGAACTTTTGTTGGTGTGGAAGGTGATACTTATAAAGGTTCTTGGGTTTCTGATAGGAAACATGGGTTTGGTGAGAAATGTTATGCTAATGGTGATGTGTATGAGGGTTGGTGGAGGTACAATTTGCAAGATGGGGAAGGGAGGTATATGTGGAGGAATGGGAATGAGTATGTTGGTGAATGGAAATGTGGTGCTATATGTGGAAATGGTGTTTTGATTTGGAAGAATGGGAATCGTTATGTGGGTTGTTGGGAGAATGGTGTGCCAAAAGGGAAAGGTGTTTTTACGTGGCGCGATGGGAGTGTTTCGTCCGGGAATTGGGGGAATGATGAGAAGAAGAGGGTTTCTGTGAGTGTGGATGATGGTTCTAAGAGTGTGGTTTTTCCTAGGATTTGTATTTGGGAGCTTGATGGGGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTGGAAGCTTGTATGTTTTATAGAGATGGAAGTGAATCAGAGATTGGTGGTGTTGGTGTTGGTGATGTAGGGTATGGACATTCACATAAGAGTCCTTGTTATTCGATCGATGGGGATGTTAAGAAACCTGGTTATACTGTTTGTAAGGGACATAAGAACTATGATTTGATTCTTAATCTTCAATTGGGTATTAGATATTGTGTTGGGAAGCATGCTTCGGTGCCTCGAGAGCTTAGGTCAGGAGATTTTGATCCAAAGGAGAAATTCTGGACAAGGTTTCCTCCAGAAGGTTCCAAGTTTACGCCTCCCCATCAATCGGTGGATTTTAGATGGAAAGACTACTGTCCCGTGGTGTTCAGGCATTTGAGGGAATTATTTGCGATTGATCCTGCCGATTACATGCTTGCTATTTGTGGCAATGATACATTGAGGGAAATGTCTTCTCCTGGAAAAAGTGGAAGCTTCTTTTACCTTACTCAAGATGACCGATTTGTAATCAAAACCTTGAAGAAGTCTGAAGTCAAGGTGCTCATCAGGATGCTTCCCAGTTACTATCAACATGTTTCTCAGTACAAGAACTCGTTGGTTACGAAATTCCTGGGAGTTCATTGTGTCAAACCTATTGGAGGCCAAAAGACTCGATTTATTGTAATGGGCAATGTGTTTTGTTCGGAGTATCAAATTCATAAGCGATTTGACCTCAAAGGTTCATCTCATGGTCGGACAACCGATAAACTCCGTAAGGATATTGATGAGACTACTACTCTTAAAGACCTTGATCTTAGTTTTGCCTTTCGCCTGGAGCAGTCTTGGTTTCAAGAGCTAAAATGGCAACTTGATAGAGACTGTGAGTTCCTGGAAGCAGAGGGAATAATGGACTACAGTTTTCTCATTGGCCTTCATTTTCGTGATGATTACTCATCGGATGAAATGAAAAGTTCACCTAATGAATTGTGTTCTGGCAAGAGAGACATGCAAAATGATGACACTCAGGACACGAGATGGATACCCATAGGCCGAGGACCTCTAATCCGGCTGGGAATTAACATGCCAGCAAGAGCGGAGAGAGTGTGTAAAGCTGGATTGGATCAGCAGCAAACTGGAAGTAGCAAATCTACCCCTTCAGAGAGTAGCGGTGAGATCTCTGATGTAATCCTTTATTTTGGCATCATTGACATTCTCCAAGATTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTACAAGTGGACCCCACATCCATCTCAGCCGTTGATCCCAAGCTATATTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGAGGACAAATAA
Protein sequence

>Msa0474230

MQETLLTISEHHHQNTNAKKNEEMEVVIVSSSPCRRPPRTRRVSPTPVEKHLPNGDVYSGSLSGNTPHGKGKYVWNDGCMYQGEWKKGKAWGKGKFSWPSGATYEGDFISGSMEGSGTFVGVEGDTYKGSWVSDRKHGFGEKCYANGDVYEGWWRYNLQDGEGRYMWRNGNEYVGEWKCGAICGNGVLIWKNGNRYVGCWENGVPKGKGVFTWRDGSVSSGNWGNDEKKRVSVSVDDGSKSVVFPRICIWELDGEAGDITCDIVDNVEACMFYRDGSESEIGGVGVGDVGYGHSHKSPCYSIDGDVKKPGYTVCKGHKNYDLILNLQLGIRYCVGKHASVPRELRSGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFVIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYQIHKRFDLKGSSHGRTTDKLRKDIDETTTLKDLDLSFAFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDYSSDEMKSSPNELCSGKRDMQNDDTQDTRWIPIGRGPLIRLGINMPARAERVCKAGLDQQQTGSSKSTPSESSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVEDK*