AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1225250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225250 MtrunA17_Chr3g0131001 97.042 710 13 4 1 707 1 705 0.0 1407
Msa1225250 MtrunA17_Chr8g0385201 74.740 673 141 11 39 707 20 667 0.0 984
Msa1225250 MtrunA17_Chr5g0424301 65.473 698 197 8 41 706 47 732 0.0 907
Msa1225250 MtrunA17_Chr3g0115111 62.672 726 211 12 28 707 21 732 0.0 883
Msa1225250 MtrunA17_Chr3g0082501 52.514 716 269 11 48 706 59 760 0.0 696
Msa1225250 MtrunA17_Chr8g0353121 53.305 711 272 10 48 706 48 750 0.0 694
Msa1225250 MtrunA17_Chr1g0171491 49.799 745 281 13 48 706 56 793 0.0 691
Msa1225250 MtrunA17_Chr7g0256301 49.157 771 290 13 11 706 48 791 0.0 686
Msa1225250 MtrunA17_Chr1g0180261 41.397 802 290 14 49 703 47 815 0.0 558
Msa1225250 MtrunA17_Chr8g0380791 37.662 770 354 18 49 705 9 765 1.67e-155 469
Msa1225250 MtrunA17_Chr8g0380791 41.176 85 50 0 139 223 7 91 2.54e-13 73.6
Msa1225250 MtrunA17_Chr2g0316631 37.374 198 115 1 26 223 18 206 2.73e-33 130
Msa1225250 MtrunA17_Chr2g0316631 36.257 171 109 0 53 223 105 275 1.00e-28 117
Msa1225250 MtrunA17_Chr2g0316631 32.877 146 98 0 53 198 151 296 1.53e-19 90.1
Msa1225250 MtrunA17_Chr2g0316631 35.200 125 81 0 53 177 174 298 1.27e-16 81.3
Msa1225250 MtrunA17_Chr2g0316611 36.364 198 117 1 26 223 18 206 4.11e-33 131
Msa1225250 MtrunA17_Chr2g0316611 39.535 172 104 0 52 223 173 344 3.66e-29 119
Msa1225250 MtrunA17_Chr2g0316611 33.498 203 125 3 53 255 105 297 3.49e-26 111
Msa1225250 MtrunA17_Chr2g0316611 35.802 162 101 2 17 177 208 367 7.93e-22 98.2
Msa1225250 MtrunA17_Chr8g0377671 40.000 175 105 0 49 223 16 190 2.11e-32 127
Msa1225250 MtrunA17_Chr8g0377671 36.478 159 101 0 53 211 112 270 9.11e-22 96.3
Msa1225250 MtrunA17_Chr8g0377671 38.406 138 85 0 52 189 134 271 4.48e-21 94.4
Msa1225250 MtrunA17_Chr8g0377671 33.918 171 113 0 53 223 89 259 1.60e-20 92.4
Msa1225250 MtrunA17_Chr8g0377191 40.000 180 108 0 49 228 8 187 3.48e-32 124
Msa1225250 MtrunA17_Chr8g0377191 41.379 87 51 0 139 225 6 92 5.86e-11 62.8
Msa1225250 MtrunA17_Chr8g0382971 39.429 175 106 0 49 223 21 195 2.35e-31 125
Msa1225250 MtrunA17_Chr8g0382971 38.824 170 104 0 53 222 71 240 1.05e-28 118
Msa1225250 MtrunA17_Chr8g0382971 36.025 161 103 0 53 213 117 277 1.23e-19 91.3
Msa1225250 MtrunA17_Chr6g0467061 38.122 181 112 0 43 223 9 189 3.32e-31 125
Msa1225250 MtrunA17_Chr6g0467061 35.233 193 117 1 53 245 88 272 6.27e-28 115
Msa1225250 MtrunA17_Chr6g0467061 36.842 171 108 0 53 223 157 327 2.13e-24 105
Msa1225250 MtrunA17_Chr4g0059911 41.379 174 101 1 55 227 11 184 1.70e-29 120
Msa1225250 MtrunA17_Chr4g0059911 38.235 170 105 0 53 222 56 225 5.41e-29 119
Msa1225250 MtrunA17_Chr8g0336161 35.052 194 123 1 35 225 176 369 7.57e-28 117
Msa1225250 MtrunA17_Chr8g0336161 36.719 128 81 0 55 182 245 372 7.10e-18 87.0
Msa1225250 MtrunA17_Chr8g0336161 34.906 106 69 0 55 160 268 373 6.40e-14 74.7
Msa1225250 MtrunA17_Chr8g0336161 33.077 130 87 0 98 227 196 325 7.37e-14 74.7
Msa1225250 MtrunA17_Chr8g0336161 38.235 102 62 1 142 242 194 295 5.80e-11 65.5
Msa1225250 MtrunA17_Chr7g0233351 33.684 190 126 0 36 225 175 364 2.28e-27 115
Msa1225250 MtrunA17_Chr7g0233351 38.281 128 79 0 55 182 240 367 2.84e-18 88.2
Msa1225250 MtrunA17_Chr7g0233351 36.220 127 81 0 100 226 193 319 2.55e-16 82.0
Msa1225250 MtrunA17_Chr7g0233351 34.906 106 69 0 55 160 263 368 5.03e-13 72.0
Msa1225250 MtrunA17_Chr8g0377211 40.426 141 83 1 49 189 16 155 3.26e-27 108
Msa1225250 MtrunA17_Chr8g0377211 38.235 102 63 0 126 227 23 124 2.39e-15 74.7
Msa1225250 MtrunA17_Chr8g0377211 38.947 95 57 1 139 233 14 107 3.92e-12 65.1
Msa1225250 MtrunA17_Chr4g0055371 36.047 172 110 0 54 225 173 344 7.64e-27 114
Msa1225250 MtrunA17_Chr4g0055371 35.938 128 82 0 55 182 220 347 6.87e-15 77.4
Msa1225250 MtrunA17_Chr4g0055371 34.109 129 85 0 98 226 171 299 1.62e-14 76.3
Msa1225250 MtrunA17_Chr4g0055371 33.962 106 70 0 55 160 243 348 1.39e-11 67.4
Msa1225250 MtrunA17_Chr8g0385241 37.000 200 93 3 57 223 14 213 1.23e-26 113
Msa1225250 MtrunA17_Chr8g0385241 34.066 182 109 2 52 222 124 305 5.69e-18 87.0
Msa1225250 MtrunA17_Chr8g0385241 32.500 160 107 1 55 213 183 342 1.87e-12 70.1
Msa1225250 MtrunA17_Chr8g0385241 34.058 138 68 1 53 190 228 342 3.65e-11 65.9
Msa1225250 MtrunA17_Chr5g0424111 36.471 170 108 0 54 223 198 367 4.92e-25 108
Msa1225250 MtrunA17_Chr3g0114791 31.771 192 123 1 40 223 164 355 5.23e-23 102
Msa1225250 MtrunA17_Chr3g0114791 36.719 128 81 0 55 182 233 360 6.65e-16 80.9
Msa1225250 MtrunA17_Chr3g0114791 32.308 130 88 0 98 227 184 313 9.88e-14 73.9
Msa1225250 MtrunA17_Chr5g0398011 40.323 124 74 0 44 167 26 149 1.13e-22 94.7
Msa1225250 MtrunA17_Chr8g0383331 36.054 147 94 0 53 199 4 150 4.90e-20 87.8
Msa1225250 MtrunA17_Chr8g0383331 37.008 127 80 0 96 222 1 127 4.02e-18 82.4
Msa1225250 MtrunA17_Chr8g0383331 37.778 90 56 0 144 233 3 92 3.15e-11 62.4
Msa1225250 MtrunA17_Chr8g0377221 29.302 215 114 3 52 228 4 218 4.55e-18 85.1
Msa1225250 MtrunA17_Chr8g0377221 32.919 161 96 3 53 211 74 224 8.34e-16 78.6
Msa1225250 MtrunA17_Chr8g0377221 25.281 178 132 1 74 250 3 180 1.33e-12 68.9
Msa1225250 MtrunA17_Chr5g0398021 39.000 100 61 0 53 152 13 112 7.50e-18 81.3
Msa1225250 MtrunA17_Chr5g0398021 33.654 104 69 0 118 221 9 112 5.96e-12 64.3
Msa1225250 MtrunA17_Chr1g0210831 28.646 192 112 3 14 204 574 741 3.42e-14 76.3
Msa1225250 MtrunA17_Chr4g0044341 30.120 166 96 7 416 566 1495 1655 5.72e-12 69.7
Msa1225250 MtrunA17_Chr8g0383551 26.047 215 136 6 13 222 72 268 1.37e-11 67.0
Msa1225250 MtrunA17_Chr4g0069951 30.539 167 94 8 416 566 1555 1715 2.91e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1225250 AT1G21980.1 63.941 746 216 11 4 706 16 751 0.0 948
Msa1225250 AT1G77740.2 67.092 705 183 9 40 706 60 753 0.0 944
Msa1225250 AT1G77740.1 67.092 705 183 9 40 706 60 753 0.0 944
Msa1225250 AT2G26420.1 59.508 731 246 9 1 707 1 705 0.0 849
Msa1225250 AT2G26420.2 58.943 738 253 9 1 707 1 719 0.0 847
Msa1225250 AT2G26420.3 58.943 738 253 9 1 707 1 719 0.0 847
Msa1225250 AT3G07960.1 53.267 704 273 11 48 706 22 714 0.0 717
Msa1225250 AT2G41210.1 48.977 733 274 13 48 706 65 771 0.0 679
Msa1225250 AT3G56960.2 49.932 739 263 19 48 706 67 778 0.0 667
Msa1225250 AT3G56960.1 49.932 739 263 19 48 706 67 778 0.0 667
Msa1225250 AT3G07960.3 52.284 591 240 8 48 600 22 608 0.0 599
Msa1225250 AT3G07960.2 54.189 561 219 7 48 570 22 582 0.0 597
Msa1225250 AT3G07960.4 54.189 561 219 7 48 570 22 582 0.0 597
Msa1225250 AT3G09920.3 42.416 778 314 15 49 706 49 812 0.0 572
Msa1225250 AT3G09920.4 42.416 778 314 15 49 706 49 812 0.0 572
Msa1225250 AT3G09920.2 42.416 778 314 15 49 706 49 812 0.0 572
Msa1225250 AT3G09920.1 42.416 778 314 15 49 706 49 812 0.0 572
Msa1225250 AT1G10900.2 40.601 766 330 16 49 707 7 754 1.54e-180 533
Msa1225250 AT1G10900.2 40.476 84 50 0 140 223 6 89 2.25e-11 67.8
Msa1225250 AT1G10900.1 40.601 766 330 16 49 707 7 754 1.54e-180 533
Msa1225250 AT1G10900.1 40.476 84 50 0 140 223 6 89 2.25e-11 67.8
Msa1225250 AT1G10900.3 40.601 766 330 16 49 707 7 754 1.54e-180 533
Msa1225250 AT1G10900.3 40.476 84 50 0 140 223 6 89 2.25e-11 67.8
Msa1225250 AT1G60890.1 47.477 436 173 6 316 705 342 767 2.72e-127 396
Msa1225250 AT1G60890.1 48.454 194 100 0 47 240 5 198 3.14e-54 199
Msa1225250 AT1G60890.2 47.477 436 173 6 316 705 354 779 4.02e-127 396
Msa1225250 AT1G60890.2 48.485 198 102 0 43 240 13 210 7.58e-55 201
Msa1225250 AT4G01190.1 38.346 399 175 10 358 704 12 391 9.08e-78 255
Msa1225250 AT4G01190.3 38.346 399 175 10 358 704 22 401 1.45e-77 254
Msa1225250 AT4G01190.2 38.346 399 175 10 358 704 22 401 1.45e-77 254
Msa1225250 AT1G01460.1 45.175 228 122 2 342 569 4 228 1.98e-61 212
Msa1225250 AT1G01460.1 48.454 97 44 2 612 707 332 423 7.91e-18 87.0
Msa1225250 AT1G21920.2 31.390 223 150 2 1 223 125 344 1.13e-26 112
Msa1225250 AT1G21920.2 37.209 129 81 0 55 183 222 350 1.28e-15 79.7
Msa1225250 AT1G21920.2 33.846 130 86 0 98 227 173 302 2.90e-12 69.3
Msa1225250 AT1G77660.1 29.596 223 157 0 1 223 126 348 1.23e-26 113
Msa1225250 AT1G77660.1 35.659 129 83 0 55 183 226 354 4.38e-15 78.6
Msa1225250 AT1G77660.1 33.077 130 87 0 98 227 177 306 1.42e-14 77.0
Msa1225250 AT1G21920.1 31.390 223 150 2 1 223 125 344 2.07e-26 112
Msa1225250 AT1G21920.1 37.209 129 81 0 55 183 222 350 1.30e-15 80.1
Msa1225250 AT1G21920.1 33.846 130 86 0 98 227 173 302 2.76e-12 69.7
Msa1225250 AT4G17080.1 34.118 170 112 0 54 223 258 427 1.04e-25 112
Msa1225250 AT4G17080.1 36.719 128 81 0 55 182 305 432 4.71e-18 88.6
Msa1225250 AT4G17080.1 32.738 168 107 2 59 226 223 384 3.42e-16 82.8
Msa1225250 AT2G35170.1 32.821 195 128 2 29 223 205 396 6.20e-25 109
Msa1225250 AT2G35170.1 36.719 128 81 0 55 182 274 401 1.17e-18 90.1
Msa1225250 AT2G35170.1 33.871 124 82 0 104 227 231 354 9.37e-15 77.8
Msa1225250 AT1G75010.1 29.375 160 88 3 46 204 595 730 3.44e-12 70.5
Msa1225250 AT1G71010.1 30.120 166 96 7 416 566 1417 1577 1.02e-11 69.3

Find 287 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGATTTAATTGAATTTA+TGG 0.058710 8_1:+90599622 None:intergenic
TTAATCTTCAATTGGGTATT+AGG 0.146414 8_1:-90598506 Msa1225250:intron
TCTGATGTAATCCTTTATTT+TGG 0.181773 8_1:-90595657 Msa1225250:CDS
ATAATGTTTCTTGCATATTT+AGG 0.190193 8_1:+90599483 None:intergenic
CTTGGTTTCAAGAGCTAAAA+TGG 0.216088 8_1:-90597387 Msa1225250:intron
GAAGCCTTGCTTATTATTAT+TGG 0.245649 8_1:-90595302 Msa1225250:three_prime_UTR
CTCTGTTGTGTGCATTCAAA+TGG 0.249220 8_1:-90594834 Msa1225250:three_prime_UTR
GTTATCATTTAGTACATCTT+AGG 0.250933 8_1:-90599533 Msa1225250:five_prime_UTR
CTTCCTTTCCTTTCCAAACT+TGG 0.251115 8_1:+90595321 None:intergenic
TATGAAATCCCTAAACCTTT+TGG 0.258022 8_1:+90595524 None:intergenic
TTAACATTTAATTCCAAGTT+TGG 0.258879 8_1:-90595334 Msa1225250:three_prime_UTR
AGAAACATGTTGATAGTAAC+TGG 0.261885 8_1:+90597747 None:intergenic
TTGATCCAAAGGAGAAATTC+TGG 0.268700 8_1:-90598327 Msa1225250:CDS
GCTATATTCCAAAAGGTTTA+GGG 0.268928 8_1:-90595532 Msa1225250:CDS
CCATTATTCCCTCTGCTTCC+AGG 0.269835 8_1:+90597248 None:intergenic
CATCTTTGGTTGCATTGAAT+TGG 0.284383 8_1:-90594944 Msa1225250:three_prime_UTR
AGCTATATTCCAAAAGGTTT+AGG 0.285097 8_1:-90595533 Msa1225250:CDS
GGTGTTGGTGTTGGTGATGT+AGG 0.285814 8_1:-90598630 Msa1225250:CDS
AGAAACATTATTAACTATTT+CGG 0.287516 8_1:-90599471 Msa1225250:CDS
TACTAATTCCACGTGAAATT+TGG 0.289691 8_1:+90599694 None:intergenic
GAAAGAGTTGGGTGTTTCTT+TGG 0.293805 8_1:-90594753 Msa1225250:three_prime_UTR
GGAGTGTTTCATCAGGGAAT+TGG 0.303949 8_1:-90598830 Msa1225250:CDS
TTGGAGAAGGGTATAGTATA+GGG 0.317495 8_1:-90595101 Msa1225250:three_prime_UTR
TTGTCGCGTTGATTGTTTCT+TGG 0.318574 8_1:+90594635 None:intergenic
GTGATACTTATAAAGGTTCT+TGG 0.319831 8_1:-90599106 Msa1225250:CDS
TTTGATTTAATTGAATTTAT+GGG 0.321380 8_1:+90599623 None:intergenic
CTTGTCCAGAATTTCTCCTT+TGG 0.321711 8_1:+90598322 None:intergenic
CACACTCTCTCCGCTCTTGC+TGG 0.322769 8_1:+90595750 None:intergenic
GAGTGTTTCATCAGGGAATT+GGG 0.334465 8_1:-90598829 Msa1225250:CDS
CAGACCCGATTTATTGTAAT+GGG 0.335217 8_1:-90597562 Msa1225250:CDS
TGATAGAGACTGTGAGTTCC+TGG 0.341577 8_1:-90597266 Msa1225250:CDS
ACTACTGTCCCGTGGTGTTC+AGG 0.341724 8_1:-90598237 Msa1225250:intron
GGCGTAAACTTGGAACCTTC+TGG 0.344560 8_1:+90598292 None:intergenic
TTTGGAGAAGGGTATAGTAT+AGG 0.346095 8_1:-90595102 Msa1225250:three_prime_UTR
CATTGCCCATTACAATAAAT+CGG 0.346280 8_1:+90597557 None:intergenic
AATATCCTTACGGAGTTTAT+CGG 0.347395 8_1:+90597468 None:intergenic
TTTGATTCTTAATCTTCAAT+TGG 0.355941 8_1:-90598514 Msa1225250:CDS
TCAGGGTCCATGGAAGGTTC+TGG 0.355954 8_1:-90599149 Msa1225250:CDS
ACTCACACAAACCAAACTTT+AGG 0.368428 8_1:-90599746 Msa1225250:five_prime_UTR
GTTCATTGTGTCAAACCTAT+TGG 0.370452 8_1:-90597688 Msa1225250:CDS
ACGCGACAAAGCAATAAATT+TGG 0.374164 8_1:-90594621 Msa1225250:three_prime_UTR
TTCAAATTTGACCATGGTGG+TGG 0.378729 8_1:-90595042 Msa1225250:three_prime_UTR
TGTCAATGATGCCAAAATAA+AGG 0.379878 8_1:+90595646 None:intergenic
TACCTTTCTTCCATTCTCCT+TGG 0.380033 8_1:+90599234 None:intergenic
TCACCTAATGAATTGTGTTC+TGG 0.380345 8_1:-90597163 Msa1225250:intron
CCTTTCGCCTGGAGCAGTCT+TGG 0.384297 8_1:-90597405 Msa1225250:CDS
CTCGTTGGTTACGAAATTCC+TGG 0.384416 8_1:-90597713 Msa1225250:CDS
CCCCATGCCAAAGTTGGTCC+AGG 0.384426 8_1:+90595441 None:intergenic
ACCGGGTTATACTGTTTGTA+AGG 0.392688 8_1:-90598553 Msa1225250:CDS
TTTCTCATAGCCTTTGGAAA+TGG 0.394020 8_1:-90595269 Msa1225250:three_prime_UTR
GTAAACACACCTTTCCCTTT+CGG 0.395044 8_1:+90598864 None:intergenic
AATGGTTGGGACCTAAAGTT+TGG 0.397085 8_1:+90599735 None:intergenic
GGAGGTATATGTGGAGGAAT+GGG 0.400881 8_1:-90598989 Msa1225250:CDS
GTATACAGTGGAAGTTTATC+AGG 0.401485 8_1:-90599308 Msa1225250:CDS
CTTGACTTCAGACTTCTTCA+AGG 0.404538 8_1:+90597954 None:intergenic
GGCCATGTCAGGTGCTCATC+AGG 0.408142 8_1:-90597777 Msa1225250:intron
ATTTGTATTTGGGAGCTTGA+TGG 0.412365 8_1:-90598738 Msa1225250:CDS
ATACAGTCAAAGATGGATAA+TGG 0.413105 8_1:-90595004 Msa1225250:three_prime_UTR
CCACTGTATACGTCGCCGTT+TGG 0.415330 8_1:+90599320 None:intergenic
GTTTGAAGGAGTAGAGGAGG+AGG 0.417184 8_1:+90599568 None:intergenic
TTGATTCTTAATCTTCAATT+GGG 0.418290 8_1:-90598513 Msa1225250:CDS
ATTGAGCCCTGGACCAACTT+TGG 0.424202 8_1:-90595448 Msa1225250:three_prime_UTR
GGGAAATTCTCATGGCCATC+AGG 0.424679 8_1:-90599197 Msa1225250:CDS
TATGTGGGTTGTTGGGAGAA+TGG 0.426025 8_1:-90598891 Msa1225250:CDS
GTGTTGGTGTTGGTGATGTA+GGG 0.426176 8_1:-90598629 Msa1225250:CDS
GATGGAAGTGAATCAGAGAT+TGG 0.430424 8_1:-90598654 Msa1225250:CDS
CCTGGAAGCAGAGGGAATAA+TGG 0.435359 8_1:-90597248 Msa1225250:CDS
ACAAATAGCAAGCATGTAAT+CGG 0.437021 8_1:+90598065 None:intergenic
TTTCATACACAGAATCTTTG+TGG 0.437698 8_1:-90595508 Msa1225250:CDS
TGATACTTATAAAGGTTCTT+GGG 0.438562 8_1:-90599105 Msa1225250:CDS
CCCTGGACCAACTTTGGCAT+GGG 0.438814 8_1:-90595442 Msa1225250:three_prime_UTR
GGAATCGTTATGTGGGTTGT+TGG 0.438945 8_1:-90598899 Msa1225250:CDS
ATACCAGAACACAATTCATT+AGG 0.439028 8_1:+90597160 None:intergenic
TTTGTATTTGGGAGCTTGAT+GGG 0.440443 8_1:-90598737 Msa1225250:CDS
CGATGGGGATGTTAAGAAAC+CGG 0.442381 8_1:-90598571 Msa1225250:CDS
ATCTAAAATCCACCGATTGA+TGG 0.444477 8_1:+90598266 None:intergenic
ATATATTCTGATGCTAGTTA+AGG 0.446546 8_1:+90595413 None:intergenic
TGAAGGAGTAGAGGAGGAGG+AGG 0.446814 8_1:+90599571 None:intergenic
GGATTGGATCAGCAGCAAAC+TGG 0.447072 8_1:-90595720 Msa1225250:CDS
TTAATTCCCAGCCGGATTAG+AGG 0.447492 8_1:+90595777 None:intergenic
GTTGGGTATTTAGGCATTTG+AGG 0.449375 8_1:-90598110 Msa1225250:intron
TTGGGTATTTAGGCATTTGA+GGG 0.449393 8_1:-90598109 Msa1225250:intron
AAGGTTCTTGGGTTTCTGAT+AGG 0.451720 8_1:-90599094 Msa1225250:CDS
CGTGATGGGAGTGTTTCATC+AGG 0.451975 8_1:-90598837 Msa1225250:CDS
GTGGAAGGTGATACTTATAA+AGG 0.453599 8_1:-90599113 Msa1225250:CDS
ACAGACCCGATTTATTGTAA+TGG 0.455479 8_1:-90597563 Msa1225250:intron
TCTAAAATCCACCGATTGAT+GGG 0.456122 8_1:+90598267 None:intergenic
TCTGATAGGAAACATGGGTT+TGG 0.456876 8_1:-90599080 Msa1225250:CDS
CTTGGGATCAACGGCTGAGA+TGG 0.457259 8_1:+90595554 None:intergenic
GATTACATGCTTGCTATTTG+TGG 0.457685 8_1:-90598063 Msa1225250:CDS
ATGGGGAAGGGAGGTATATG+TGG 0.461629 8_1:-90598998 Msa1225250:CDS
ATACCAGAGGACCTCTAATC+CGG 0.461846 8_1:-90595788 Msa1225250:intron
ACATTGCTGCTAAAGTTTGA+AGG 0.464820 8_1:+90599554 None:intergenic
TGGGAGCTTGATGGGGAAGC+TGG 0.464916 8_1:-90598729 Msa1225250:CDS
ATCCCAAGCTATATTCCAAA+AGG 0.465411 8_1:-90595539 Msa1225250:CDS
TCAAATTTGACCATGGTGGT+GGG 0.465596 8_1:-90595041 Msa1225250:three_prime_UTR
TGCTAATGGTGATGTGTATG+AGG 0.466007 8_1:-90599045 Msa1225250:CDS
GTCCTTGTTATTCGATCGAT+GGG 0.468826 8_1:-90598587 Msa1225250:CDS
GCGGAGAGAGTGTGTAAAGC+TGG 0.469147 8_1:-90595741 Msa1225250:CDS
GAAGAGTGCATACCGGCCTA+TGG 0.469968 8_1:+90596995 None:intergenic
GCCGTGTTCGCGGTGGTCGA+CGG 0.472053 8_1:+90599375 None:intergenic
TTTGGTCACGTAATATGAAT+CGG 0.474111 8_1:-90594603 Msa1225250:three_prime_UTR
GGTGAGAAATGTTATGCTAA+TGG 0.475438 8_1:-90599059 Msa1225250:CDS
TGAATTGGAGAGAGATCAAA+AGG 0.475491 8_1:-90594929 Msa1225250:three_prime_UTR
TTGAGGGAAATGTCTTCTCC+TGG 0.476508 8_1:-90598030 Msa1225250:CDS
GAATCGTTATGTGGGTTGTT+GGG 0.476688 8_1:-90598898 Msa1225250:CDS
GAAAAGCACAAGAAAGAGTT+GGG 0.477157 8_1:-90594764 Msa1225250:three_prime_UTR
GCCTTGCTTATTATTATTGG+TGG 0.478123 8_1:-90595299 Msa1225250:three_prime_UTR
GAGATTGGTGGTGTTGGTGT+TGG 0.478650 8_1:-90598639 Msa1225250:CDS
CTTCGGTGCCTCGAGAGCTT+AGG 0.479608 8_1:-90598360 Msa1225250:CDS
CAAATCGGTCATCTTGAGTA+AGG 0.481065 8_1:+90597986 None:intergenic
TTTGGTTTGTGTGAGTGTAA+TGG 0.482045 8_1:+90599753 None:intergenic
GGGAGGTATATGTGGAGGAA+TGG 0.483176 8_1:-90598990 Msa1225250:CDS
GTTTCTGTGAGTGTGGATGA+TGG 0.484895 8_1:-90598786 Msa1225250:CDS
TCACGTAATATGAATCGGTT+TGG 0.485070 8_1:-90594598 Msa1225250:three_prime_UTR
CAAACCTATTGGAGGCCAAA+AGG 0.485887 8_1:-90597677 Msa1225250:intron
AGCTAGAAACTGACAGAATG+AGG 0.486654 8_1:+90594859 None:intergenic
GGTGACACGCGCCGTGTTCG+CGG 0.487367 8_1:+90599365 None:intergenic
GTGTAATGGAATGGATTCAT+TGG 0.487646 8_1:+90599767 None:intergenic
CTTGAAACCAAGACTGCTCC+AGG 0.487985 8_1:+90597398 None:intergenic
GGAGGTGCAATTTGCAAGAT+GGG 0.490169 8_1:-90599016 Msa1225250:CDS
TCTGTTGTGTGCATTCAAAT+GGG 0.492382 8_1:-90594833 Msa1225250:three_prime_UTR
GAAGAATGGGAATCGTTATG+TGG 0.493445 8_1:-90598907 Msa1225250:CDS
TTGATGGGGAGGCGTAAACT+TGG 0.495578 8_1:+90598282 None:intergenic
GGAATATAGCTTGGGATCAA+CGG 0.495725 8_1:+90595545 None:intergenic
GAGAGTGTGTAAAGCTGGAT+TGG 0.495931 8_1:-90595736 Msa1225250:CDS
GACCATGAGATGAACCTTTG+AGG 0.496961 8_1:+90597497 None:intergenic
CAGAGGACCTCTAATCCGGC+TGG 0.499620 8_1:-90595784 Msa1225250:CDS
TCAACGGCTGAGATGGATGT+GGG 0.500864 8_1:+90595561 None:intergenic
TGCAATTTGCAAGATGGGGA+AGG 0.504770 8_1:-90599011 Msa1225250:CDS
AAATTTGACCATGGTGGTGG+GGG 0.505004 8_1:-90595039 Msa1225250:three_prime_UTR
TGTACATGCTATGCATCATA+AGG 0.505158 8_1:-90595164 Msa1225250:three_prime_UTR
TGTATACGTCGCCGTTTGGA+AGG 0.506660 8_1:+90599324 None:intergenic
TTGTGTTGGGAAGCATGCTT+CGG 0.507813 8_1:-90598377 Msa1225250:CDS
TAGTCTCATCAATATCCTTA+CGG 0.513121 8_1:+90597458 None:intergenic
TGGAGGACAAATAACATGGT+TGG 0.516054 8_1:-90595488 Msa1225250:exon
TAGTGGAAGTGGTTGTGTAA+TGG 0.516760 8_1:+90599717 None:intergenic
ATGTGTATGAGGGATGGTGG+AGG 0.519472 8_1:-90599034 Msa1225250:CDS
GACCTCAAAGGTTCATCTCA+TGG 0.520619 8_1:-90597499 Msa1225250:CDS
CATAAGCGATTTGACCTCAA+AGG 0.521058 8_1:-90597511 Msa1225250:CDS
TGGGTTTCTGATAGGAAACA+TGG 0.521152 8_1:-90599086 Msa1225250:CDS
TGTGGTGCTATATGTGGTAA+TGG 0.522855 8_1:-90598942 Msa1225250:CDS
AGAAAAGCACAAGAAAGAGT+TGG 0.524496 8_1:-90594765 Msa1225250:three_prime_UTR
GCCACCAATAATAATAAGCA+AGG 0.526304 8_1:+90595298 None:intergenic
CAAAGGAGAAATTCTGGACA+AGG 0.526565 8_1:-90598321 Msa1225250:CDS
ATCAACGGCTGAGATGGATG+TGG 0.528438 8_1:+90595560 None:intergenic
GTGAAATTTGGTAGTGGAAG+TGG 0.529725 8_1:+90599706 None:intergenic
CAAATTTGACCATGGTGGTG+GGG 0.530441 8_1:-90595040 Msa1225250:three_prime_UTR
AGTAATCATCACGAAAATGA+AGG 0.531530 8_1:+90597206 None:intergenic
TTGGAAATGGAATGAGGTGG+GGG 0.531711 8_1:-90595256 Msa1225250:three_prime_UTR
TACCAAGGAGAATGGAAGAA+AGG 0.532077 8_1:-90599236 Msa1225250:CDS
GTGCCTCGAGAGCTTAGGTC+AGG 0.532296 8_1:-90598355 Msa1225250:CDS
GAAGAGGGTTTCTGTGAGTG+TGG 0.532798 8_1:-90598793 Msa1225250:CDS
AAAAGTTCCAGAACCTTCCA+TGG 0.533472 8_1:+90599142 None:intergenic
CCCATGCCAAAGTTGGTCCA+GGG 0.533612 8_1:+90595442 None:intergenic
GGTGTTGGTGATGTAGGGTA+TGG 0.535016 8_1:-90598624 Msa1225250:CDS
GCCCTGGACCAACTTTGGCA+TGG 0.535051 8_1:-90595443 Msa1225250:three_prime_UTR
GATGCATGTACCAAGGAGAA+TGG 0.535617 8_1:-90599244 Msa1225250:CDS
TTGTGGCAATGATACATTGA+GGG 0.539553 8_1:-90598046 Msa1225250:CDS
ACTGTACATACAGTCAAAGA+TGG 0.540024 8_1:-90595011 Msa1225250:three_prime_UTR
AGTCCTTGTTATTCGATCGA+TGG 0.540552 8_1:-90598588 Msa1225250:CDS
TTGTGATATTGTTGATAATG+TGG 0.540603 8_1:-90598697 Msa1225250:CDS
TGCATACAAGTCACTACAAG+TGG 0.541017 8_1:-90595586 Msa1225250:CDS
TATTTCCACCTGAACACCAC+GGG 0.543557 8_1:+90598229 None:intergenic
GTGTGTTTACGTGGCGTGAT+GGG 0.545765 8_1:-90598851 Msa1225250:CDS
CCATCAGGAGCTACTTATGA+AGG 0.545903 8_1:-90599182 Msa1225250:CDS
GAAAGGCAAAACTAAGATCA+AGG 0.546651 8_1:+90597422 None:intergenic
ATTTAATTCCAAGTTTGGAA+AGG 0.547839 8_1:-90595329 Msa1225250:three_prime_UTR
GCCGTCGACCACCGCGAACA+CGG 0.548092 8_1:-90599376 Msa1225250:CDS
TGGAGGTGCAATTTGCAAGA+TGG 0.548301 8_1:-90599017 Msa1225250:CDS
GTTCGCGGTGGTCGACGGCA+TGG 0.548954 8_1:+90599380 None:intergenic
GTGATGTGTATGAGGGATGG+TGG 0.550040 8_1:-90599037 Msa1225250:CDS
TGGACAAGGTTTCCTCCAGA+AGG 0.550122 8_1:-90598307 Msa1225250:CDS
CTTGAAGAAGTCTGAAGTCA+AGG 0.551924 8_1:-90597953 Msa1225250:intron
GGGGAATGATGAGAAGAAGA+GGG 0.553675 8_1:-90598808 Msa1225250:CDS
ACAATATGAGAATTGAGCCC+TGG 0.553803 8_1:-90595459 Msa1225250:three_prime_UTR
GAAGTGGTTGTGTAATGGTT+GGG 0.553803 8_1:+90599722 None:intergenic
GGAATGAGTATGTTGGTGAA+TGG 0.558164 8_1:-90598968 Msa1225250:CDS
ATTGCCCATTACAATAAATC+GGG 0.558443 8_1:+90597558 None:intergenic
AGCTCCCAAATACAAATCCT+AGG 0.558462 8_1:+90598744 None:intergenic
TTTGTGTGAGTGTAATGGAA+TGG 0.558797 8_1:+90599758 None:intergenic
AATGGAAGAAAGGTAAAGCA+TGG 0.560447 8_1:-90599226 Msa1225250:CDS
CCAAGACTGCTCCAGGCGAA+AGG 0.561092 8_1:+90597405 None:intergenic
ATAGCAAGCATGTAATCGGC+AGG 0.561196 8_1:+90598069 None:intergenic
TTTATTTCAGGGTCCATGGA+AGG 0.561312 8_1:-90599155 Msa1225250:CDS
TTCCACGTGAAATTTGGTAG+TGG 0.561420 8_1:+90599700 None:intergenic
AAAGTTTGAAGGAGTAGAGG+AGG 0.561682 8_1:+90599565 None:intergenic
CTGGCATGTTAATTCCCAGC+CGG 0.561746 8_1:+90595769 None:intergenic
ACGGCAAAGGTAAATACGTA+TGG 0.563043 8_1:-90599274 Msa1225250:CDS
ATCTCACCGCTACTCTCTGA+AGG 0.563905 8_1:+90595681 None:intergenic
TTGTATTTGGGAGCTTGATG+GGG 0.567064 8_1:-90598736 Msa1225250:CDS
AATGTGAATGCATGTGGAGT+GGG 0.567084 8_1:-90595070 Msa1225250:three_prime_UTR
TGTAATGGAATGGATTCATT+GGG 0.567179 8_1:+90599768 None:intergenic
GTTTACGCCTCCCCATCAAT+CGG 0.568425 8_1:-90598278 Msa1225250:CDS
ATTCCAAGTTTGGAAAGGAA+AGG 0.569109 8_1:-90595324 Msa1225250:three_prime_UTR
CAGAATGAGGGGTCCTCTGT+AGG 0.569312 8_1:+90594872 None:intergenic
GGTGTGTTTACGTGGCGTGA+TGG 0.569414 8_1:-90598852 Msa1225250:CDS
TCAAAAGGAGATGATTTGCC+TGG 0.570822 8_1:-90594914 Msa1225250:three_prime_UTR
TCGTTGGTTACGAAATTCCT+GGG 0.571328 8_1:-90597712 Msa1225250:CDS
GCAATTTGCAAGATGGGGAA+GGG 0.571866 8_1:-90599010 Msa1225250:CDS
GGGAGAATGGTGTGCCGAAA+GGG 0.571892 8_1:-90598878 Msa1225250:CDS
AAGAGTGCATACCGGCCTAT+GGG 0.572174 8_1:+90596996 None:intergenic
CCCTTACAAACAGTATAACC+CGG 0.573249 8_1:+90598552 None:intergenic
TAGCATCAGAATATATGAGC+TGG 0.574920 8_1:-90595406 Msa1225250:three_prime_UTR
ATGACACTCAGGACACGAGA+TGG 0.576124 8_1:-90597022 Msa1225250:CDS
CTGTGAGTTCCTGGAAGCAG+AGG 0.577302 8_1:-90597257 Msa1225250:CDS
AATGGTGTGCCGAAAGGGAA+AGG 0.577935 8_1:-90598873 Msa1225250:CDS
CATTGTGTCAAACCTATTGG+AGG 0.578059 8_1:-90597685 Msa1225250:CDS
GCTAAAGTTTGAAGGAGTAG+AGG 0.583173 8_1:+90599562 None:intergenic
ATGGAAGAAAGGTAAAGCAT+GGG 0.583487 8_1:-90599225 Msa1225250:CDS
CCACCTCATTCCATTTCCAA+AGG 0.583673 8_1:+90595259 None:intergenic
GTGTGTCCCCATGCCAAAGT+TGG 0.584056 8_1:+90595435 None:intergenic
CTTTGGAAATGGAATGAGGT+GGG 0.587317 8_1:-90595258 Msa1225250:three_prime_UTR
ATACAAAAGCACAAGAAGCA+TGG 0.587829 8_1:+90594555 None:intergenic
GGATGATGGTTCTAAGAGTG+TGG 0.588270 8_1:-90598772 Msa1225250:CDS
AATTAACATGCCAGCAAGAG+CGG 0.589839 8_1:-90595760 Msa1225250:CDS
GGTAAATACGTATGGAACGA+TGG 0.590153 8_1:-90599266 Msa1225250:CDS
GTGAATGCATGTGGAGTGGG+AGG 0.593185 8_1:-90595067 Msa1225250:three_prime_UTR
GGAAGTGGTTGTGTAATGGT+TGG 0.594426 8_1:+90599721 None:intergenic
GACAACCGATAAACTCCGTA+AGG 0.596237 8_1:-90597473 Msa1225250:CDS
CCGGGTTATACTGTTTGTAA+GGG 0.599766 8_1:-90598552 Msa1225250:CDS
GCTAGAAACTGACAGAATGA+GGG 0.600878 8_1:+90594860 None:intergenic
AGAGGACCTCTAATCCGGCT+GGG 0.601886 8_1:-90595783 Msa1225250:CDS
GAATCAGAGATTGGTGGTGT+TGG 0.602478 8_1:-90598645 Msa1225250:CDS
TTCTCAGTACAAGAACTCGT+TGG 0.608088 8_1:-90597728 Msa1225250:CDS
CGAGATGGATACCCATAGGC+CGG 0.610897 8_1:-90597007 Msa1225250:intron
ATGGTGATGTGTATGAGGGA+TGG 0.612140 8_1:-90599040 Msa1225250:CDS
AGTGTTTCATCAGGGAATTG+GGG 0.612643 8_1:-90598828 Msa1225250:CDS
TAGCCTTTGGAAATGGAATG+AGG 0.613044 8_1:-90595262 Msa1225250:three_prime_UTR
TGGAAGAAAGGTAAAGCATG+GGG 0.615750 8_1:-90599224 Msa1225250:CDS
AAATCCACCGATTGATGGGG+AGG 0.615911 8_1:+90598271 None:intergenic
TGGAAATGTGGTGCTATATG+TGG 0.618355 8_1:-90598948 Msa1225250:CDS
TCTCACCGCTACTCTCTGAA+GGG 0.618386 8_1:+90595682 None:intergenic
GGGTTTCTGATAGGAAACAT+GGG 0.619609 8_1:-90599085 Msa1225250:CDS
CCTTCATAAGTAGCTCCTGA+TGG 0.620490 8_1:+90599182 None:intergenic
AAGGGAAAGGTGTGTTTACG+TGG 0.620553 8_1:-90598860 Msa1225250:CDS
TTTGGAAATGGAATGAGGTG+GGG 0.621319 8_1:-90595257 Msa1225250:three_prime_UTR
TGTGAGTTCCTGGAAGCAGA+GGG 0.621723 8_1:-90597256 Msa1225250:CDS
GGGAAGGGAGGTATATGTGG+AGG 0.626837 8_1:-90598995 Msa1225250:CDS
TCAAAGGTTCATCTCATGGT+CGG 0.627326 8_1:-90597495 Msa1225250:CDS
AGAAACTTGGCATAAAAGAG+AGG 0.630216 8_1:-90594506 Msa1225250:three_prime_UTR
GCTAATGGTGATGTGTATGA+GGG 0.630315 8_1:-90599044 Msa1225250:CDS
ACGTATTTACCTTTGCCGTG+TGG 0.632527 8_1:+90599278 None:intergenic
TCTCCTGACCTAAGCTCTCG+AGG 0.633465 8_1:+90598352 None:intergenic
TGGGAGAATGGTGTGCCGAA+AGG 0.634731 8_1:-90598879 Msa1225250:CDS
GTGTTTCATCAGGGAATTGG+GGG 0.636387 8_1:-90598827 Msa1225250:CDS
AAGAATGGGAATCGTTATGT+GGG 0.637878 8_1:-90598906 Msa1225250:CDS
GACACGAGATGGATACCCAT+AGG 0.639932 8_1:-90597011 Msa1225250:CDS
TTTGTGGCAATGATACATTG+AGG 0.640401 8_1:-90598047 Msa1225250:CDS
GTTTGACACAATGAACTCCC+AGG 0.642986 8_1:+90597695 None:intergenic
AGGAATGGGAATGAGTATGT+TGG 0.643494 8_1:-90598975 Msa1225250:CDS
TACGCCTCCCCATCAATCGG+TGG 0.646074 8_1:-90598275 Msa1225250:CDS
CCTGGACCAACTTTGGCATG+GGG 0.647992 8_1:-90595441 Msa1225250:three_prime_UTR
CCTTTGGAAATGGAATGAGG+TGG 0.650625 8_1:-90595259 Msa1225250:three_prime_UTR
ATTTGCAAGATGGGGAAGGG+AGG 0.650775 8_1:-90599007 Msa1225250:CDS
AGAAAGAAAAGTTCCTACAG+AGG 0.652469 8_1:-90594885 Msa1225250:three_prime_UTR
TTTGTGGAGGACAAATAACA+TGG 0.653967 8_1:-90595492 Msa1225250:exon
TATGTTGGTGAATGGAAATG+TGG 0.655881 8_1:-90598960 Msa1225250:CDS
CATACACAGAATCTTTGTGG+AGG 0.658046 8_1:-90595505 Msa1225250:CDS
TTCCACTACCAAATTTCACG+TGG 0.658199 8_1:-90599702 Msa1225250:five_prime_UTR
CCAAACGGCGACGTATACAG+TGG 0.660988 8_1:-90599320 Msa1225250:CDS
CTAAAATCCACCGATTGATG+GGG 0.661133 8_1:+90598268 None:intergenic
GATGGGGATGTTAAGAAACC+GGG 0.661758 8_1:-90598570 Msa1225250:CDS
CATGCAAAATGATGACACTC+AGG 0.664084 8_1:-90597033 Msa1225250:CDS
GGAAACACACCACACGGCAA+AGG 0.664480 8_1:-90599287 Msa1225250:CDS
GAGGGATTCAAATTTGACCA+TGG 0.665021 8_1:-90595048 Msa1225250:three_prime_UTR
AAATGTGAATGCATGTGGAG+TGG 0.667107 8_1:-90595071 Msa1225250:three_prime_UTR
GACACGCGCCGTGTTCGCGG+TGG 0.667971 8_1:+90599368 None:intergenic
GTAAACTTGGAACCTTCTGG+AGG 0.668383 8_1:+90598295 None:intergenic
TTATTTCCACCTGAACACCA+CGG 0.668462 8_1:+90598228 None:intergenic
GGATTCAAATTTGACCATGG+TGG 0.668478 8_1:-90595045 Msa1225250:three_prime_UTR
TTATCAGGAAACACACCACA+CGG 0.669927 8_1:-90599293 Msa1225250:CDS
GAAACATGTTGATAGTAACT+GGG 0.673484 8_1:+90597748 None:intergenic
GTGATGGGAGTGTTTCATCA+GGG 0.673719 8_1:-90598836 Msa1225250:CDS
CTAGAAACTGACAGAATGAG+GGG 0.676895 8_1:+90594861 None:intergenic
AACGATGGATGCATGTACCA+AGG 0.678792 8_1:-90599251 Msa1225250:CDS
GAGGTGCAATTTGCAAGATG+GGG 0.686193 8_1:-90599015 Msa1225250:CDS
GGAAGAAAGGTAAAGCATGG+GGG 0.686830 8_1:-90599223 Msa1225250:CDS
TGAATGCATGTGGAGTGGGA+GGG 0.690669 8_1:-90595066 Msa1225250:three_prime_UTR
CTCACCGCTACTCTCTGAAG+GGG 0.694466 8_1:+90595683 None:intergenic
ATGGAAAGACTACTGTCCCG+TGG 0.696500 8_1:-90598245 Msa1225250:CDS
CAACGGCTGAGATGGATGTG+GGG 0.698303 8_1:+90595562 None:intergenic
TCTACCCCTTCAGAGAGTAG+CGG 0.711188 8_1:-90595687 Msa1225250:CDS
GGAAGTGAATCAGAGATTGG+TGG 0.714127 8_1:-90598651 Msa1225250:CDS
TCCCCATCGATCGAATAACA+AGG 0.724583 8_1:+90598585 None:intergenic
GGTTTGGTATGTGAGAGCGA+TGG 0.727772 8_1:-90594582 Msa1225250:three_prime_UTR
TCCTTGTTATTCGATCGATG+GGG 0.734954 8_1:-90598586 Msa1225250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTAATTGAATTTAT+GGG + chr8_1:90594552-90594571 None:intergenic 10.0%
!!! TAAATTTTTATAATTTCACA+AGG + chr8_1:90597254-90597273 None:intergenic 10.0%
!!! TTTTTTATTACTTTTTGTAA+TGG - chr8_1:90599046-90599065 Msa1225250:CDS 10.0%
!!! CTTTGATTTAATTGAATTTA+TGG + chr8_1:90594553-90594572 None:intergenic 15.0%
!! AGAAACATTATTAACTATTT+CGG - chr8_1:90594701-90594720 Msa1225250:three_prime_UTR 15.0%
!!! TATTAATGATGTTTGTATTT+TGG - chr8_1:90596018-90596037 Msa1225250:intron 15.0%
!! TAAAATGTAGCAATAAAAAA+TGG + chr8_1:90597461-90597480 None:intergenic 15.0%
!! TATGAAAAGATTATTCATTT+AGG - chr8_1:90597479-90597498 Msa1225250:CDS 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG - chr8_1:90597775-90597794 Msa1225250:intron 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG - chr8_1:90597776-90597795 Msa1225250:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr8_1:90597840-90597859 Msa1225250:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr8_1:90597841-90597860 Msa1225250:intron 15.0%
!! AAAAAAACTTACTATAACAT+TGG + chr8_1:90598048-90598067 None:intergenic 15.0%
!! TTCAAAAATATAAAGAAACT+TGG - chr8_1:90599653-90599672 Msa1225250:five_prime_UTR 15.0%
!! TATACATTAGTTAAAAAGTA+TGG + chr8_1:90599785-90599804 None:intergenic 15.0%
!!! TTTGTATTAGAGACATTTTT+GGG + chr8_1:90594523-90594542 None:intergenic 20.0%
!!! ATTTGTATTAGAGACATTTT+TGG + chr8_1:90594524-90594543 None:intergenic 20.0%
!! ATAATGTTTCTTGCATATTT+AGG + chr8_1:90594692-90594711 None:intergenic 20.0%
!! TTTGATTCTTAATCTTCAAT+TGG - chr8_1:90595658-90595677 Msa1225250:CDS 20.0%
!! TTGATTCTTAATCTTCAATT+GGG - chr8_1:90595659-90595678 Msa1225250:CDS 20.0%
!!! TTGGTTTATTTTTATGTGTT+TGG - chr8_1:90595732-90595751 Msa1225250:CDS 20.0%
!!! TTTTGTTTTAGATATTGTGT+TGG - chr8_1:90595781-90595800 Msa1225250:CDS 20.0%
!!! TTTGTTTTAGATATTGTGTT+GGG - chr8_1:90595782-90595801 Msa1225250:CDS 20.0%
!! TCAAGTCTAGTAATTAATTA+AGG + chr8_1:90596263-90596282 None:intergenic 20.0%
!! AGAACAAATCAATAAATGAT+GGG + chr8_1:90597393-90597412 None:intergenic 20.0%
!! TAGAACAAATCAATAAATGA+TGG + chr8_1:90597394-90597413 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG - chr8_1:90597777-90597796 Msa1225250:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr8_1:90597800-90597819 Msa1225250:intron 20.0%
!! GTTGTATTGAAAATTGAAAT+AGG - chr8_1:90597874-90597893 Msa1225250:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr8_1:90597910-90597929 Msa1225250:intron 20.0%
!! TGTCAATATTTATATGTAAC+TGG + chr8_1:90598197-90598216 None:intergenic 20.0%
!! TATTAAATATCTGCATAGTT+AGG + chr8_1:90598339-90598358 None:intergenic 20.0%
!!! TTTTGCTAATATCATAATCT+TGG + chr8_1:90598556-90598575 None:intergenic 20.0%
!! TTAACATTTAATTCCAAGTT+TGG - chr8_1:90598838-90598857 Msa1225250:CDS 20.0%
!!! TGTTTTTTGTTTTCATTTAG+AGG - chr8_1:90598958-90598977 Msa1225250:CDS 20.0%
!!! GTTTTTTGTTTTCATTTAGA+GGG - chr8_1:90598959-90598978 Msa1225250:CDS 20.0%
!!! ATTACTTTTTGTAATGGTTT+TGG - chr8_1:90599052-90599071 Msa1225250:CDS 20.0%
!!! ATGAATGAATTTTACATCTT+TGG - chr8_1:90599214-90599233 Msa1225250:CDS 20.0%
!!! ATTGGACATATATTTTGAAA+CGG + chr8_1:90599726-90599745 None:intergenic 20.0%
! GTTATCATTTAGTACATCTT+AGG - chr8_1:90594639-90594658 Msa1225250:three_prime_UTR 25.0%
!! TTTTCTTTGCATTTGTGTTT+TGG + chr8_1:90594737-90594756 None:intergenic 25.0%
!!! TATGAAGGTGATTTTATTTC+AGG - chr8_1:90595005-90595024 Msa1225250:three_prime_UTR 25.0%
!!! ATGAAGGTGATTTTATTTCA+GGG - chr8_1:90595006-90595025 Msa1225250:three_prime_UTR 25.0%
! TGATACTTATAAAGGTTCTT+GGG - chr8_1:90595067-90595086 Msa1225250:three_prime_UTR 25.0%
!! TTTTTCCTAGGATTTGTATT+TGG - chr8_1:90595423-90595442 Msa1225250:three_prime_UTR 25.0%
!! TTTTCCTAGGATTTGTATTT+GGG - chr8_1:90595424-90595443 Msa1225250:three_prime_UTR 25.0%
!!! TTGTGATATTGTTGATAATG+TGG - chr8_1:90595475-90595494 Msa1225250:three_prime_UTR 25.0%
! TTAATCTTCAATTGGGTATT+AGG - chr8_1:90595666-90595685 Msa1225250:CDS 25.0%
! TGTTATCTACATTGTTAGTT+TGG - chr8_1:90595701-90595720 Msa1225250:CDS 25.0%
!!! TAATGATGTTTGTATTTTGG+TGG - chr8_1:90596021-90596040 Msa1225250:intron 25.0%
!!! AATGATGTTTGTATTTTGGT+GGG - chr8_1:90596022-90596041 Msa1225250:intron 25.0%
!!! TCAAGGTTTTGATTACAAAT+CGG + chr8_1:90596204-90596223 None:intergenic 25.0%
! TCTAGTAATTAATTAAGGCT+AGG + chr8_1:90596258-90596277 None:intergenic 25.0%
! TATAAAACCTATATTGAGCA+AGG - chr8_1:90596309-90596328 Msa1225250:intron 25.0%
! TTCAGTGCAAAATTTAAACT+AGG + chr8_1:90596530-90596549 None:intergenic 25.0%
! AATGAATACTTGTATTGCTA+TGG - chr8_1:90596582-90596601 Msa1225250:intron 25.0%
!! TTTTATGATGTTCTTAGAGT+TGG - chr8_1:90596853-90596872 Msa1225250:intron 25.0%
!! TTTTGTAATGATTTTTGCTC+AGG - chr8_1:90596878-90596897 Msa1225250:intron 25.0%
! TTAAAAGATTTGTGGGATTA+TGG - chr8_1:90597097-90597116 Msa1225250:intron 25.0%
! ACAACAAAAACAATCAGATA+CGG + chr8_1:90597212-90597231 None:intergenic 25.0%
! GACTAAATATGGAAAATTCA+AGG + chr8_1:90597293-90597312 None:intergenic 25.0%
! TAGAAATCAAAGTCACTTAT+GGG - chr8_1:90597412-90597431 Msa1225250:CDS 25.0%
! TAAAAGTAAAAGAAATGACC+CGG + chr8_1:90597537-90597556 None:intergenic 25.0%
!! TTTTGCTTCTATTTGCATTA+TGG + chr8_1:90597601-90597620 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr8_1:90597799-90597818 Msa1225250:intron 25.0%
!! TTGAAATAGGTCAGTTATTT+TGG - chr8_1:90597887-90597906 Msa1225250:intron 25.0%
!!! TGAAATAGGTCAGTTATTTT+GGG - chr8_1:90597888-90597907 Msa1225250:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr8_1:90597909-90597928 Msa1225250:intron 25.0%
!!! TCTGATGTAATCCTTTATTT+TGG - chr8_1:90598515-90598534 Msa1225250:CDS 25.0%
! ATATATTCTGATGCTAGTTA+AGG + chr8_1:90598762-90598781 None:intergenic 25.0%
! ATTTAATTCCAAGTTTGGAA+AGG - chr8_1:90598843-90598862 Msa1225250:CDS 25.0%
!! TAAATTTTTCTCATAGCCTT+TGG - chr8_1:90598897-90598916 Msa1225250:CDS 25.0%
!!! TCATTATGCTTTTTCAAACT+TGG + chr8_1:90599474-90599493 None:intergenic 25.0%
! GATCAAAATTCAAAAAGCTA+AGG + chr8_1:90599692-90599711 None:intergenic 25.0%
! TGTAATGGAATGGATTCATT+GGG + chr8_1:90594407-90594426 None:intergenic 30.0%
TACTAATTCCACGTGAAATT+TGG + chr8_1:90594481-90594500 None:intergenic 30.0%
GTGATACTTATAAAGGTTCT+TGG - chr8_1:90595066-90595085 Msa1225250:three_prime_UTR 30.0%
!!! GTGTTTTGATTTGGAAGAAT+GGG - chr8_1:90595252-90595271 Msa1225250:three_prime_UTR 30.0%
! GCTTGTATGTTTTATAGAGA+TGG - chr8_1:90595500-90595519 Msa1225250:CDS 30.0%
! CTACATTGTTAGTTTGGATT+TGG - chr8_1:90595707-90595726 Msa1225250:CDS 30.0%
! TGTTAGTTTGGATTTGGATT+TGG - chr8_1:90595713-90595732 Msa1225250:CDS 30.0%
! TGGCGTTTTTAATAAGATTG+TGG - chr8_1:90595752-90595771 Msa1225250:CDS 30.0%
! TGGTTGTTTGTTTCTTTGTT+GGG - chr8_1:90596045-90596064 Msa1225250:intron 30.0%
TGTTTCTTTGTTGGGTATTT+AGG - chr8_1:90596053-90596072 Msa1225250:intron 30.0%
ACAAATAGCAAGCATGTAAT+CGG + chr8_1:90596110-90596129 None:intergenic 30.0%
AATTTCACCTTGCTCAATAT+AGG + chr8_1:90596319-90596338 None:intergenic 30.0%
!! GAAACATGTTGATAGTAACT+GGG + chr8_1:90596427-90596446 None:intergenic 30.0%
!! AGAAACATGTTGATAGTAAC+TGG + chr8_1:90596428-90596447 None:intergenic 30.0%
ATTGCCCATTACAATAAATC+GGG + chr8_1:90596617-90596636 None:intergenic 30.0%
CATTGCCCATTACAATAAAT+CGG + chr8_1:90596618-90596637 None:intergenic 30.0%
AATATCCTTACGGAGTTTAT+CGG + chr8_1:90596707-90596726 None:intergenic 30.0%
TAGTCTCATCAATATCCTTA+CGG + chr8_1:90596717-90596736 None:intergenic 30.0%
AGTGAAAGAAACTTTACACA+AGG + chr8_1:90596825-90596844 None:intergenic 30.0%
AGTAATCATCACGAAAATGA+AGG + chr8_1:90596969-90596988 None:intergenic 30.0%
! TTTTCGTGATGATTACTCAT+CGG - chr8_1:90596972-90596991 Msa1225250:intron 30.0%
ATACCAGAACACAATTCATT+AGG + chr8_1:90597015-90597034 None:intergenic 30.0%
AATTCACATGAAAGGAAACA+TGG + chr8_1:90597062-90597081 None:intergenic 30.0%
! AAATCTTTTAACCCTTGGAT+CGG + chr8_1:90597088-90597107 None:intergenic 30.0%
!!! TTGTTTTTGTTGTTTCAGCT+TGG - chr8_1:90597219-90597238 Msa1225250:CDS 30.0%
!! TATCTCTTTGGGACTAAATA+TGG + chr8_1:90597304-90597323 None:intergenic 30.0%
TCCTCAAAACTTATCTCTTT+GGG + chr8_1:90597315-90597334 None:intergenic 30.0%
ATCCTCAAAACTTATCTCTT+TGG + chr8_1:90597316-90597335 None:intergenic 30.0%
!! TTTTGAGGATTTAGAAATGC+TGG - chr8_1:90597326-90597345 Msa1225250:intron 30.0%
!! CAAATCAATAAATGATGGGT+TGG + chr8_1:90597389-90597408 None:intergenic 30.0%
CTAGAAATCAAAGTCACTTA+TGG - chr8_1:90597411-90597430 Msa1225250:CDS 30.0%
! TATTTCTACATGACTAGTAG+TGG + chr8_1:90597687-90597706 None:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr8_1:90597784-90597803 Msa1225250:intron 30.0%
!!! GTTTTTTTGACAACAAATGC+TGG - chr8_1:90598060-90598079 Msa1225250:CDS 30.0%
! AACAAATAGCTTTACAGAGA+AGG + chr8_1:90598105-90598124 None:intergenic 30.0%
CAATGATATTGATAGAGCAA+TGG - chr8_1:90598131-90598150 Msa1225250:intron 30.0%
! TTTTAGTAATCCGTTTCTCT+TGG - chr8_1:90598287-90598306 Msa1225250:CDS 30.0%
TTTAGTAATCCGTTTCTCTT+GGG - chr8_1:90598288-90598307 Msa1225250:CDS 30.0%
TATGATTCTTGATATACCAG+AGG - chr8_1:90598371-90598390 Msa1225250:CDS 30.0%
TGTCAATGATGCCAAAATAA+AGG + chr8_1:90598529-90598548 None:intergenic 30.0%
!!! AACCTTTTGGAATATAGCTT+GGG + chr8_1:90598638-90598657 None:intergenic 30.0%
!!! AAACCTTTTGGAATATAGCT+TGG + chr8_1:90598639-90598658 None:intergenic 30.0%
AGCTATATTCCAAAAGGTTT+AGG - chr8_1:90598639-90598658 Msa1225250:CDS 30.0%
GCTATATTCCAAAAGGTTTA+GGG - chr8_1:90598640-90598659 Msa1225250:CDS 30.0%
! TATGAAATCCCTAAACCTTT+TGG + chr8_1:90598651-90598670 None:intergenic 30.0%
TTTCATACACAGAATCTTTG+TGG - chr8_1:90598664-90598683 Msa1225250:CDS 30.0%
GAAGCCTTGCTTATTATTAT+TGG - chr8_1:90598870-90598889 Msa1225250:CDS 30.0%
!!! TTTTGTAATGGTTTTGGAGA+AGG - chr8_1:90599058-90599077 Msa1225250:CDS 30.0%
!!! TTTGTAATGGTTTTGGAGAA+GGG - chr8_1:90599059-90599078 Msa1225250:CDS 30.0%
TAGAAAAATGTGAATGCATG+TGG - chr8_1:90599096-90599115 Msa1225250:CDS 30.0%
ATACAGTCAAAGATGGATAA+TGG - chr8_1:90599168-90599187 Msa1225250:CDS 30.0%
TTTGGTCACGTAATATGAAT+CGG - chr8_1:90599569-90599588 Msa1225250:five_prime_UTR 30.0%
!!! GACATATATTTTGAAACGGA+TGG + chr8_1:90599722-90599741 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG + chr8_1:90599744-90599763 None:intergenic 30.0%
! GTGTAATGGAATGGATTCAT+TGG + chr8_1:90594408-90594427 None:intergenic 35.0%
! TTTGTGTGAGTGTAATGGAA+TGG + chr8_1:90594417-90594436 None:intergenic 35.0%
!! TTTGGTTTGTGTGAGTGTAA+TGG + chr8_1:90594422-90594441 None:intergenic 35.0%
ACTCACACAAACCAAACTTT+AGG - chr8_1:90594426-90594445 Msa1225250:three_prime_UTR 35.0%
ACATTGCTGCTAAAGTTTGA+AGG + chr8_1:90594621-90594640 None:intergenic 35.0%
!! TCTTTGCATTTGTGTTTTGG+TGG + chr8_1:90594734-90594753 None:intergenic 35.0%
CACAAATGCAAAGAAAAACG+AGG - chr8_1:90594740-90594759 Msa1225250:three_prime_UTR 35.0%
TGCAAAGAAAAACGAGGAAA+TGG - chr8_1:90594746-90594765 Msa1225250:three_prime_UTR 35.0%
!!! TTTGGAAGGTGTTTTTCTAC+TGG + chr8_1:90594837-90594856 None:intergenic 35.0%
GTAGAAAAACACCTTCCAAA+CGG - chr8_1:90594837-90594856 Msa1225250:three_prime_UTR 35.0%
GTATACAGTGGAAGTTTATC+AGG - chr8_1:90594864-90594883 Msa1225250:three_prime_UTR 35.0%
AATGGAAGAAAGGTAAAGCA+TGG - chr8_1:90594946-90594965 Msa1225250:three_prime_UTR 35.0%
ATGGAAGAAAGGTAAAGCAT+GGG - chr8_1:90594947-90594966 Msa1225250:three_prime_UTR 35.0%
!! TGATTTTATTTCAGGGTCCA+TGG - chr8_1:90595013-90595032 Msa1225250:three_prime_UTR 35.0%
GTGGAAGGTGATACTTATAA+AGG - chr8_1:90595059-90595078 Msa1225250:three_prime_UTR 35.0%
GGTGAGAAATGTTATGCTAA+TGG - chr8_1:90595113-90595132 Msa1225250:three_prime_UTR 35.0%
! TATGTTGGTGAATGGAAATG+TGG - chr8_1:90595212-90595231 Msa1225250:three_prime_UTR 35.0%
!!! GTGGTAATGGTGTTTTGATT+TGG - chr8_1:90595243-90595262 Msa1225250:three_prime_UTR 35.0%
!!! GGTGTTTTGATTTGGAAGAA+TGG - chr8_1:90595251-90595270 Msa1225250:three_prime_UTR 35.0%
AAGAATGGGAATCGTTATGT+GGG - chr8_1:90595266-90595285 Msa1225250:three_prime_UTR 35.0%
ATTTGTATTTGGGAGCTTGA+TGG - chr8_1:90595434-90595453 Msa1225250:three_prime_UTR 35.0%
TTTGTATTTGGGAGCTTGAT+GGG - chr8_1:90595435-90595454 Msa1225250:three_prime_UTR 35.0%
TTGATCCAAAGGAGAAATTC+TGG - chr8_1:90595845-90595864 Msa1225250:intron 35.0%
! TCTAAAATCCACCGATTGAT+GGG + chr8_1:90595908-90595927 None:intergenic 35.0%
! ATCTAAAATCCACCGATTGA+TGG + chr8_1:90595909-90595928 None:intergenic 35.0%
!! ATCAATCGGTGGATTTTAGA+TGG - chr8_1:90595908-90595927 Msa1225250:intron 35.0%
! GTGGTTGTTTGTTTCTTTGT+TGG - chr8_1:90596044-90596063 Msa1225250:intron 35.0%
TTGGGTATTTAGGCATTTGA+GGG - chr8_1:90596063-90596082 Msa1225250:intron 35.0%
!! GATTACATGCTTGCTATTTG+TGG - chr8_1:90596109-90596128 Msa1225250:intron 35.0%
TTTGTGGCAATGATACATTG+AGG - chr8_1:90596125-90596144 Msa1225250:intron 35.0%
TTGTGGCAATGATACATTGA+GGG - chr8_1:90596126-90596145 Msa1225250:intron 35.0%
CCAACTAATCATTGAAACAG+AGG + chr8_1:90596374-90596393 None:intergenic 35.0%
CCTCTGTTTCAATGATTAGT+TGG - chr8_1:90596371-90596390 Msa1225250:intron 35.0%
! CTGTTTCAATGATTAGTTGG+TGG - chr8_1:90596374-90596393 Msa1225250:intron 35.0%
GTTCATTGTGTCAAACCTAT+TGG - chr8_1:90596484-90596503 Msa1225250:intron 35.0%
ACAGACCCGATTTATTGTAA+TGG - chr8_1:90596609-90596628 Msa1225250:intron 35.0%
CAGACCCGATTTATTGTAAT+GGG - chr8_1:90596610-90596629 Msa1225250:intron 35.0%
!! AATGGGCAATGTGTTTTGTT+CGG - chr8_1:90596627-90596646 Msa1225250:intron 35.0%
GAAAGGCAAAACTAAGATCA+AGG + chr8_1:90596753-90596772 None:intergenic 35.0%
CTTGGTTTCAAGAGCTAAAA+TGG - chr8_1:90596785-90596804 Msa1225250:intron 35.0%
!! ATGGACTACAGTTTTCTCAT+TGG - chr8_1:90596943-90596962 Msa1225250:intron 35.0%
TCACCTAATGAATTGTGTTC+TGG - chr8_1:90597009-90597028 Msa1225250:CDS 35.0%
ATGAAAGGAAACATGGAACT+AGG + chr8_1:90597055-90597074 None:intergenic 35.0%
ATCGGACAAATTCACATGAA+AGG + chr8_1:90597070-90597089 None:intergenic 35.0%
TCCAAGGGTTAAAAGATTTG+TGG - chr8_1:90597089-90597108 Msa1225250:intron 35.0%
CCAAGGGTTAAAAGATTTGT+GGG - chr8_1:90597090-90597109 Msa1225250:intron 35.0%
! ATAAAGTGAAGAGTGCATAC+CGG + chr8_1:90597187-90597206 None:intergenic 35.0%
! TCCCAAAGAGATAAGTTTTG+AGG - chr8_1:90597311-90597330 Msa1225250:intron 35.0%
TTATGGGAATGTGGATTCAT+GGG - chr8_1:90597428-90597447 Msa1225250:CDS 35.0%
TAGACTAAAGCTCAAGAACA+TGG + chr8_1:90597568-90597587 None:intergenic 35.0%
! TTCTTGAGCTTTAGTCTATC+TGG - chr8_1:90597570-90597589 Msa1225250:intron 35.0%
TGCTTCTATTTGCATTATGG+CGG + chr8_1:90597598-90597617 None:intergenic 35.0%
GTCATGTAGAAATAAAGCAG+TGG - chr8_1:90597693-90597712 Msa1225250:CDS 35.0%
CAAAGTAGGTCAATTAAACC+GGG + chr8_1:90597740-90597759 None:intergenic 35.0%
CCAAAGTAGGTCAATTAAAC+CGG + chr8_1:90597741-90597760 None:intergenic 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + chr8_1:90597754-90597773 None:intergenic 35.0%
CACTTCTAAATCACAGATAG+AGG + chr8_1:90597974-90597993 None:intergenic 35.0%
CATGACAAATCAAGTCATTG+TGG + chr8_1:90598024-90598043 None:intergenic 35.0%
!! CACAATGACTTGATTTGTCA+TGG - chr8_1:90598022-90598041 Msa1225250:CDS 35.0%
TGATATTGATAGAGCAATGG+TGG - chr8_1:90598134-90598153 Msa1225250:intron 35.0%
ATCCCAAGCTATATTCCAAA+AGG - chr8_1:90598633-90598652 Msa1225250:CDS 35.0%
TTTGTGGAGGACAAATAACA+TGG - chr8_1:90598680-90598699 Msa1225250:CDS 35.0%
TAGCATCAGAATATATGAGC+TGG - chr8_1:90598766-90598785 Msa1225250:CDS 35.0%
ATTCCAAGTTTGGAAAGGAA+AGG - chr8_1:90598848-90598867 Msa1225250:CDS 35.0%
GCCTTGCTTATTATTATTGG+TGG - chr8_1:90598873-90598892 Msa1225250:CDS 35.0%
GCCACCAATAATAATAAGCA+AGG + chr8_1:90598877-90598896 None:intergenic 35.0%
! TTTCTCATAGCCTTTGGAAA+TGG - chr8_1:90598903-90598922 Msa1225250:CDS 35.0%
TGTACATGCTATGCATCATA+AGG - chr8_1:90599008-90599027 Msa1225250:CDS 35.0%
! TTTGGAGAAGGGTATAGTAT+AGG - chr8_1:90599070-90599089 Msa1225250:CDS 35.0%
! TTGGAGAAGGGTATAGTATA+GGG - chr8_1:90599071-90599090 Msa1225250:CDS 35.0%
ACTGTACATACAGTCAAAGA+TGG - chr8_1:90599161-90599180 Msa1225250:CDS 35.0%
CATCTTTGGTTGCATTGAAT+TGG - chr8_1:90599228-90599247 Msa1225250:CDS 35.0%
TGAATTGGAGAGAGATCAAA+AGG - chr8_1:90599243-90599262 Msa1225250:CDS 35.0%
AGAAAGAAAAGTTCCTACAG+AGG - chr8_1:90599287-90599306 Msa1225250:CDS 35.0%
TCTGTTGTGTGCATTCAAAT+GGG - chr8_1:90599339-90599358 Msa1225250:CDS 35.0%
! AGAAAAGCACAAGAAAGAGT+TGG - chr8_1:90599407-90599426 Msa1225250:CDS 35.0%
! GAAAAGCACAAGAAAGAGTT+GGG - chr8_1:90599408-90599427 Msa1225250:CDS 35.0%
ACGCGACAAAGCAATAAATT+TGG - chr8_1:90599551-90599570 Msa1225250:five_prime_UTR 35.0%
TCACGTAATATGAATCGGTT+TGG - chr8_1:90599574-90599593 Msa1225250:five_prime_UTR 35.0%
! ATACAAAAGCACAAGAAGCA+TGG + chr8_1:90599620-90599639 None:intergenic 35.0%
AGAAACTTGGCATAAAAGAG+AGG - chr8_1:90599666-90599685 Msa1225250:five_prime_UTR 35.0%
AATGGTTGGGACCTAAAGTT+TGG + chr8_1:90594440-90594459 None:intergenic 40.0%
GAAGTGGTTGTGTAATGGTT+GGG + chr8_1:90594453-90594472 None:intergenic 40.0%
TAGTGGAAGTGGTTGTGTAA+TGG + chr8_1:90594458-90594477 None:intergenic 40.0%
!! GTGAAATTTGGTAGTGGAAG+TGG + chr8_1:90594469-90594488 None:intergenic 40.0%
TTCCACTACCAAATTTCACG+TGG - chr8_1:90594470-90594489 Msa1225250:three_prime_UTR 40.0%
TTCCACGTGAAATTTGGTAG+TGG + chr8_1:90594475-90594494 None:intergenic 40.0%
AAAGTTTGAAGGAGTAGAGG+AGG + chr8_1:90594610-90594629 None:intergenic 40.0%
GCTAAAGTTTGAAGGAGTAG+AGG + chr8_1:90594613-90594632 None:intergenic 40.0%
!!! TTGCATTTGTGTTTTGGTGG+TGG + chr8_1:90594731-90594750 None:intergenic 40.0%
TTATCAGGAAACACACCACA+CGG - chr8_1:90594879-90594898 Msa1225250:three_prime_UTR 40.0%
ACGGCAAAGGTAAATACGTA+TGG - chr8_1:90594898-90594917 Msa1225250:three_prime_UTR 40.0%
GGTAAATACGTATGGAACGA+TGG - chr8_1:90594906-90594925 Msa1225250:three_prime_UTR 40.0%
TACCAAGGAGAATGGAAGAA+AGG - chr8_1:90594936-90594955 Msa1225250:three_prime_UTR 40.0%
TACCTTTCTTCCATTCTCCT+TGG + chr8_1:90594941-90594960 None:intergenic 40.0%
TGGAAGAAAGGTAAAGCATG+GGG - chr8_1:90594948-90594967 Msa1225250:three_prime_UTR 40.0%
TTTATTTCAGGGTCCATGGA+AGG - chr8_1:90595017-90595036 Msa1225250:three_prime_UTR 40.0%
AAAAGTTCCAGAACCTTCCA+TGG + chr8_1:90595033-90595052 None:intergenic 40.0%
!!! GAAGGTTCTGGAACTTTTGT+TGG - chr8_1:90595035-90595054 Msa1225250:three_prime_UTR 40.0%
!!! TTCTGGAACTTTTGTTGGTG+TGG - chr8_1:90595040-90595059 Msa1225250:three_prime_UTR 40.0%
AAGGTTCTTGGGTTTCTGAT+AGG - chr8_1:90595078-90595097 Msa1225250:three_prime_UTR 40.0%
TGGGTTTCTGATAGGAAACA+TGG - chr8_1:90595086-90595105 Msa1225250:three_prime_UTR 40.0%
GGGTTTCTGATAGGAAACAT+GGG - chr8_1:90595087-90595106 Msa1225250:three_prime_UTR 40.0%
TCTGATAGGAAACATGGGTT+TGG - chr8_1:90595092-90595111 Msa1225250:three_prime_UTR 40.0%
! TGCTAATGGTGATGTGTATG+AGG - chr8_1:90595127-90595146 Msa1225250:three_prime_UTR 40.0%
! GCTAATGGTGATGTGTATGA+GGG - chr8_1:90595128-90595147 Msa1225250:three_prime_UTR 40.0%
AGGAATGGGAATGAGTATGT+TGG - chr8_1:90595197-90595216 Msa1225250:three_prime_UTR 40.0%
! GGAATGAGTATGTTGGTGAA+TGG - chr8_1:90595204-90595223 Msa1225250:three_prime_UTR 40.0%
!! TGGAAATGTGGTGCTATATG+TGG - chr8_1:90595224-90595243 Msa1225250:three_prime_UTR 40.0%
!! TGTGGTGCTATATGTGGTAA+TGG - chr8_1:90595230-90595249 Msa1225250:three_prime_UTR 40.0%
GAAGAATGGGAATCGTTATG+TGG - chr8_1:90595265-90595284 Msa1225250:three_prime_UTR 40.0%
! GAATCGTTATGTGGGTTGTT+GGG - chr8_1:90595274-90595293 Msa1225250:three_prime_UTR 40.0%
GTAAACACACCTTTCCCTTT+CGG + chr8_1:90595311-90595330 None:intergenic 40.0%
GAGTGTTTCATCAGGGAATT+GGG - chr8_1:90595343-90595362 Msa1225250:three_prime_UTR 40.0%
AGTGTTTCATCAGGGAATTG+GGG - chr8_1:90595344-90595363 Msa1225250:three_prime_UTR 40.0%
!! CTAAGAGTGTGGTTTTTCCT+AGG - chr8_1:90595411-90595430 Msa1225250:three_prime_UTR 40.0%
AGCTCCCAAATACAAATCCT+AGG + chr8_1:90595431-90595450 None:intergenic 40.0%
TTGTATTTGGGAGCTTGATG+GGG - chr8_1:90595436-90595455 Msa1225250:three_prime_UTR 40.0%
GATGGAAGTGAATCAGAGAT+TGG - chr8_1:90595518-90595537 Msa1225250:CDS 40.0%
!! AGTCCTTGTTATTCGATCGA+TGG - chr8_1:90595584-90595603 Msa1225250:CDS 40.0%
!! GTCCTTGTTATTCGATCGAT+GGG - chr8_1:90595585-90595604 Msa1225250:CDS 40.0%
!! TCCTTGTTATTCGATCGATG+GGG - chr8_1:90595586-90595605 Msa1225250:CDS 40.0%
ACCGGGTTATACTGTTTGTA+AGG - chr8_1:90595619-90595638 Msa1225250:CDS 40.0%
CCCTTACAAACAGTATAACC+CGG + chr8_1:90595623-90595642 None:intergenic 40.0%
CCGGGTTATACTGTTTGTAA+GGG - chr8_1:90595620-90595639 Msa1225250:CDS 40.0%
!! GTCAGGAGATTTTGATCCAA+AGG - chr8_1:90595834-90595853 Msa1225250:intron 40.0%
CTTGTCCAGAATTTCTCCTT+TGG + chr8_1:90595853-90595872 None:intergenic 40.0%
CAAAGGAGAAATTCTGGACA+AGG - chr8_1:90595851-90595870 Msa1225250:intron 40.0%
! CTAAAATCCACCGATTGATG+GGG + chr8_1:90595907-90595926 None:intergenic 40.0%
TTATTTCCACCTGAACACCA+CGG + chr8_1:90595947-90595966 None:intergenic 40.0%
!!! GATGTTTGTATTTTGGTGGG+TGG - chr8_1:90596025-90596044 Msa1225250:intron 40.0%
GTTGGGTATTTAGGCATTTG+AGG - chr8_1:90596062-90596081 Msa1225250:intron 40.0%
ATGTCTTCTCCTGGAAAAAG+TGG - chr8_1:90596151-90596170 Msa1225250:intron 40.0%
!!! AAGAAGCTTCCACTTTTTCC+AGG + chr8_1:90596163-90596182 None:intergenic 40.0%
CAAATCGGTCATCTTGAGTA+AGG + chr8_1:90596189-90596208 None:intergenic 40.0%
CTTGACTTCAGACTTCTTCA+AGG + chr8_1:90596221-90596240 None:intergenic 40.0%
! CTTGAAGAAGTCTGAAGTCA+AGG - chr8_1:90596219-90596238 Msa1225250:intron 40.0%
TTCTCAGTACAAGAACTCGT+TGG - chr8_1:90596444-90596463 Msa1225250:intron 40.0%
! TCGTTGGTTACGAAATTCCT+GGG - chr8_1:90596460-90596479 Msa1225250:intron 40.0%
CATTGTGTCAAACCTATTGG+AGG - chr8_1:90596487-90596506 Msa1225250:intron 40.0%
! ACTAGGTAGTCCATACCTTT+TGG + chr8_1:90596513-90596532 None:intergenic 40.0%
CATAAGCGATTTGACCTCAA+AGG - chr8_1:90596661-90596680 Msa1225250:intron 40.0%
TCAAAGGTTCATCTCATGGT+CGG - chr8_1:90596677-90596696 Msa1225250:intron 40.0%
AAAGGAAACATGGAACTAGG+AGG + chr8_1:90597052-90597071 None:intergenic 40.0%
ATGTGAATTTGTCCGATCCA+AGG - chr8_1:90597073-90597092 Msa1225250:intron 40.0%
TGTGAATTTGTCCGATCCAA+GGG - chr8_1:90597074-90597093 Msa1225250:intron 40.0%
! CCCACAAATCTTTTAACCCT+TGG + chr8_1:90597093-90597112 None:intergenic 40.0%
! TGTGGGATTATGGTTTTTGC+AGG - chr8_1:90597107-90597126 Msa1225250:intron 40.0%
CATGCAAAATGATGACACTC+AGG - chr8_1:90597139-90597158 Msa1225250:intron 40.0%
AGGATTTAGAAATGCTGGTG+CGG - chr8_1:90597331-90597350 Msa1225250:intron 40.0%
CAAAGTCACTTATGGGAATG+TGG - chr8_1:90597419-90597438 Msa1225250:CDS 40.0%
CTTATGGGAATGTGGATTCA+TGG - chr8_1:90597427-90597446 Msa1225250:CDS 40.0%
AAGTAAAAGAAATGACCCGG+TGG + chr8_1:90597534-90597553 None:intergenic 40.0%
GCTTCTATTTGCATTATGGC+GGG + chr8_1:90597597-90597616 None:intergenic 40.0%
! CCAATATTGCTAGTTTAGGG+TGG + chr8_1:90597629-90597648 None:intergenic 40.0%
CCACCCTAAACTAGCAATAT+TGG - chr8_1:90597626-90597645 Msa1225250:intron 40.0%
! GGGCCAATATTGCTAGTTTA+GGG + chr8_1:90597632-90597651 None:intergenic 40.0%
! TGGGCCAATATTGCTAGTTT+AGG + chr8_1:90597633-90597652 None:intergenic 40.0%
CCGGTTTAATTGACCTACTT+TGG - chr8_1:90597738-90597757 Msa1225250:CDS 40.0%
AGAAAATGGGCCAGTTATTC+CGG - chr8_1:90597923-90597942 Msa1225250:intron 40.0%
CTAAATCACAGATAGAGGAC+TGG + chr8_1:90597969-90597988 None:intergenic 40.0%
! TATGCTCCTGTTTGTTGAGA+TGG - chr8_1:90597997-90598016 Msa1225250:CDS 40.0%
TTTGACAACAAATGCTGGAG+TGG - chr8_1:90598065-90598084 Msa1225250:CDS 40.0%
ATTGATAGAGCAATGGTGGT+TGG - chr8_1:90598138-90598157 Msa1225250:intron 40.0%
AATTAACATGCCAGCAAGAG+CGG - chr8_1:90598412-90598431 Msa1225250:intron 40.0%
TGCATACAAGTCACTACAAG+TGG - chr8_1:90598586-90598605 Msa1225250:CDS 40.0%
GGAATATAGCTTGGGATCAA+CGG + chr8_1:90598630-90598649 None:intergenic 40.0%
CATACACAGAATCTTTGTGG+AGG - chr8_1:90598667-90598686 Msa1225250:CDS 40.0%
TGGAGGACAAATAACATGGT+TGG - chr8_1:90598684-90598703 Msa1225250:CDS 40.0%
ACAATATGAGAATTGAGCCC+TGG - chr8_1:90598713-90598732 Msa1225250:CDS 40.0%
CTTCCTTTCCTTTCCAAACT+TGG + chr8_1:90598854-90598873 None:intergenic 40.0%
! TAGCCTTTGGAAATGGAATG+AGG - chr8_1:90598910-90598929 Msa1225250:CDS 40.0%
! CTTTGGAAATGGAATGAGGT+GGG - chr8_1:90598914-90598933 Msa1225250:CDS 40.0%
TTTGGAAATGGAATGAGGTG+GGG - chr8_1:90598915-90598934 Msa1225250:CDS 40.0%
AAATGTGAATGCATGTGGAG+TGG - chr8_1:90599101-90599120 Msa1225250:CDS 40.0%
AATGTGAATGCATGTGGAGT+GGG - chr8_1:90599102-90599121 Msa1225250:CDS 40.0%
GAGGGATTCAAATTTGACCA+TGG - chr8_1:90599124-90599143 Msa1225250:CDS 40.0%
GGATTCAAATTTGACCATGG+TGG - chr8_1:90599127-90599146 Msa1225250:CDS 40.0%
TTCAAATTTGACCATGGTGG+TGG - chr8_1:90599130-90599149 Msa1225250:CDS 40.0%
TCAAATTTGACCATGGTGGT+GGG - chr8_1:90599131-90599150 Msa1225250:CDS 40.0%
! TCAAAAGGAGATGATTTGCC+TGG - chr8_1:90599258-90599277 Msa1225250:CDS 40.0%
! ACTTTTCTTTCTTGCTCACC+AGG + chr8_1:90599279-90599298 None:intergenic 40.0%
CTAGAAACTGACAGAATGAG+GGG + chr8_1:90599314-90599333 None:intergenic 40.0%
GCTAGAAACTGACAGAATGA+GGG + chr8_1:90599315-90599334 None:intergenic 40.0%
AGCTAGAAACTGACAGAATG+AGG + chr8_1:90599316-90599335 None:intergenic 40.0%
CTCTGTTGTGTGCATTCAAA+TGG - chr8_1:90599338-90599357 Msa1225250:CDS 40.0%
GAAAGAGTTGGGTGTTTCTT+TGG - chr8_1:90599419-90599438 Msa1225250:CDS 40.0%
!! TTGTCGCGTTGATTGTTTCT+TGG + chr8_1:90599540-90599559 None:intergenic 40.0%
GGAAGTGGTTGTGTAATGGT+TGG + chr8_1:90594454-90594473 None:intergenic 45.0%
!!! ATTTTTGGGTAGCAGTGAGG+TGG + chr8_1:90594509-90594528 None:intergenic 45.0%
!!! GACATTTTTGGGTAGCAGTG+AGG + chr8_1:90594512-90594531 None:intergenic 45.0%
! AGGTGTTTTTCTACTGGCGT+CGG + chr8_1:90594831-90594850 None:intergenic 45.0%
ACGTATTTACCTTTGCCGTG+TGG + chr8_1:90594897-90594916 None:intergenic 45.0%
AACGATGGATGCATGTACCA+AGG - chr8_1:90594921-90594940 Msa1225250:three_prime_UTR 45.0%
GATGCATGTACCAAGGAGAA+TGG - chr8_1:90594928-90594947 Msa1225250:three_prime_UTR 45.0%
GGAAGAAAGGTAAAGCATGG+GGG - chr8_1:90594949-90594968 Msa1225250:three_prime_UTR 45.0%
AAAGGTAAAGCATGGGGGAA+AGG - chr8_1:90594954-90594973 Msa1225250:three_prime_UTR 45.0%
AAGGTAAAGCATGGGGGAAA+GGG - chr8_1:90594955-90594974 Msa1225250:three_prime_UTR 45.0%
CCTTCATAAGTAGCTCCTGA+TGG + chr8_1:90594993-90595012 None:intergenic 45.0%
CCATCAGGAGCTACTTATGA+AGG - chr8_1:90594990-90595009 Msa1225250:three_prime_UTR 45.0%
! GGAACTTTTGTTGGTGTGGA+AGG - chr8_1:90595044-90595063 Msa1225250:three_prime_UTR 45.0%
! ATGGTGATGTGTATGAGGGA+TGG - chr8_1:90595132-90595151 Msa1225250:three_prime_UTR 45.0%
! TGGAGGTGCAATTTGCAAGA+TGG - chr8_1:90595155-90595174 Msa1225250:three_prime_UTR 45.0%
! GGAGGTGCAATTTGCAAGAT+GGG - chr8_1:90595156-90595175 Msa1225250:three_prime_UTR 45.0%
GAGGTGCAATTTGCAAGATG+GGG - chr8_1:90595157-90595176 Msa1225250:three_prime_UTR 45.0%
TGCAATTTGCAAGATGGGGA+AGG - chr8_1:90595161-90595180 Msa1225250:three_prime_UTR 45.0%
GCAATTTGCAAGATGGGGAA+GGG - chr8_1:90595162-90595181 Msa1225250:three_prime_UTR 45.0%
! GGAGGTATATGTGGAGGAAT+GGG - chr8_1:90595183-90595202 Msa1225250:three_prime_UTR 45.0%
! GGAATCGTTATGTGGGTTGT+TGG - chr8_1:90595273-90595292 Msa1225250:three_prime_UTR 45.0%
! TATGTGGGTTGTTGGGAGAA+TGG - chr8_1:90595281-90595300 Msa1225250:three_prime_UTR 45.0%
! AAGGGAAAGGTGTGTTTACG+TGG - chr8_1:90595312-90595331 Msa1225250:three_prime_UTR 45.0%
!! GTGATGGGAGTGTTTCATCA+GGG - chr8_1:90595336-90595355 Msa1225250:three_prime_UTR 45.0%
! GGAGTGTTTCATCAGGGAAT+TGG - chr8_1:90595342-90595361 Msa1225250:three_prime_UTR 45.0%
GTGTTTCATCAGGGAATTGG+GGG - chr8_1:90595345-90595364 Msa1225250:three_prime_UTR 45.0%
GGGGAATGATGAGAAGAAGA+GGG - chr8_1:90595364-90595383 Msa1225250:three_prime_UTR 45.0%
GTTTCTGTGAGTGTGGATGA+TGG - chr8_1:90595386-90595405 Msa1225250:three_prime_UTR 45.0%
!! GGATGATGGTTCTAAGAGTG+TGG - chr8_1:90595400-90595419 Msa1225250:three_prime_UTR 45.0%
GGAAGTGAATCAGAGATTGG+TGG - chr8_1:90595521-90595540 Msa1225250:CDS 45.0%
!! GAATCAGAGATTGGTGGTGT+TGG - chr8_1:90595527-90595546 Msa1225250:CDS 45.0%
!! GTGTTGGTGTTGGTGATGTA+GGG - chr8_1:90595543-90595562 Msa1225250:CDS 45.0%
TCCCCATCGATCGAATAACA+AGG + chr8_1:90595590-90595609 None:intergenic 45.0%
CGATGGGGATGTTAAGAAAC+CGG - chr8_1:90595601-90595620 Msa1225250:CDS 45.0%
GATGGGGATGTTAAGAAACC+GGG - chr8_1:90595602-90595621 Msa1225250:CDS 45.0%
! TTGTGTTGGGAAGCATGCTT+CGG - chr8_1:90595795-90595814 Msa1225250:intron 45.0%
GTAAACTTGGAACCTTCTGG+AGG + chr8_1:90595880-90595899 None:intergenic 45.0%
TATTTCCACCTGAACACCAC+GGG + chr8_1:90595946-90595965 None:intergenic 45.0%
ATAGCAAGCATGTAATCGGC+AGG + chr8_1:90596106-90596125 None:intergenic 45.0%
TTGAGGGAAATGTCTTCTCC+TGG - chr8_1:90596142-90596161 Msa1225250:intron 45.0%
! CTCGTTGGTTACGAAATTCC+TGG - chr8_1:90596459-90596478 Msa1225250:intron 45.0%
GTTTGACACAATGAACTCCC+AGG + chr8_1:90596480-90596499 None:intergenic 45.0%
CAAACCTATTGGAGGCCAAA+AGG - chr8_1:90596495-90596514 Msa1225250:intron 45.0%
! CATACCTTTTGGCCTCCAAT+AGG + chr8_1:90596502-90596521 None:intergenic 45.0%
CTATTGGAGGCCAAAAGGTA+TGG - chr8_1:90596500-90596519 Msa1225250:intron 45.0%
GACCTCAAAGGTTCATCTCA+TGG - chr8_1:90596673-90596692 Msa1225250:intron 45.0%
GACCATGAGATGAACCTTTG+AGG + chr8_1:90596678-90596697 None:intergenic 45.0%
GACAACCGATAAACTCCGTA+AGG - chr8_1:90596699-90596718 Msa1225250:intron 45.0%
!!! TCTTAGTTTTGCCTTTCGCC+TGG - chr8_1:90596756-90596775 Msa1225250:intron 45.0%
TGATAGAGACTGTGAGTTCC+TGG - chr8_1:90596906-90596925 Msa1225250:intron 45.0%
GAATGTGGATTCATGGGACA+TGG - chr8_1:90597434-90597453 Msa1225250:CDS 45.0%
TCTCTTCTGCTTTCATCCAC+CGG - chr8_1:90597515-90597534 Msa1225250:CDS 45.0%
! TTTGCTACTTGCATGCGCAT+GGG + chr8_1:90597652-90597671 None:intergenic 45.0%
GTAGGTCAATTAAACCGGGA+CGG + chr8_1:90597736-90597755 None:intergenic 45.0%
GAAAATGGGCCAGTTATTCC+GGG - chr8_1:90597924-90597943 Msa1225250:intron 45.0%
TGTGGTCCATCTCAACAAAC+AGG + chr8_1:90598006-90598025 None:intergenic 45.0%
ATAGAGCAATGGTGGTTGGT+AGG - chr8_1:90598142-90598161 Msa1225250:intron 45.0%
GAAAGAGAGCCCAAGAGAAA+CGG + chr8_1:90598300-90598319 None:intergenic 45.0%
ATACCAGAGGACCTCTAATC+CGG - chr8_1:90598384-90598403 Msa1225250:intron 45.0%
! TTAATTCCCAGCCGGATTAG+AGG + chr8_1:90598398-90598417 None:intergenic 45.0%
! GAGAGTGTGTAAAGCTGGAT+TGG - chr8_1:90598436-90598455 Msa1225250:intron 45.0%
CCACCTCATTCCATTTCCAA+AGG + chr8_1:90598916-90598935 None:intergenic 45.0%
! CCTTTGGAAATGGAATGAGG+TGG - chr8_1:90598913-90598932 Msa1225250:CDS 45.0%
TTGGAAATGGAATGAGGTGG+GGG - chr8_1:90598916-90598935 Msa1225250:CDS 45.0%
! CAAATTTGACCATGGTGGTG+GGG - chr8_1:90599132-90599151 Msa1225250:CDS 45.0%
!! AAATTTGACCATGGTGGTGG+GGG - chr8_1:90599133-90599152 Msa1225250:CDS 45.0%
GTTTGAAGGAGTAGAGGAGG+AGG + chr8_1:90594607-90594626 None:intergenic 50.0%
TGTATACGTCGCCGTTTGGA+AGG + chr8_1:90594851-90594870 None:intergenic 50.0%
GGGGGAAAGGGAAATTCTCA+TGG - chr8_1:90594967-90594986 Msa1225250:three_prime_UTR 50.0%
GGGAAATTCTCATGGCCATC+AGG - chr8_1:90594975-90594994 Msa1225250:three_prime_UTR 50.0%
GTGATGTGTATGAGGGATGG+TGG - chr8_1:90595135-90595154 Msa1225250:three_prime_UTR 50.0%
! ATGTGTATGAGGGATGGTGG+AGG - chr8_1:90595138-90595157 Msa1225250:three_prime_UTR 50.0%
ATTTGCAAGATGGGGAAGGG+AGG - chr8_1:90595165-90595184 Msa1225250:three_prime_UTR 50.0%
! ATGGGGAAGGGAGGTATATG+TGG - chr8_1:90595174-90595193 Msa1225250:three_prime_UTR 50.0%
! GGGAGGTATATGTGGAGGAA+TGG - chr8_1:90595182-90595201 Msa1225250:three_prime_UTR 50.0%
AATGGTGTGCCGAAAGGGAA+AGG - chr8_1:90595299-90595318 Msa1225250:three_prime_UTR 50.0%
GTGTGTTTACGTGGCGTGAT+GGG - chr8_1:90595321-90595340 Msa1225250:three_prime_UTR 50.0%
!! CGTGATGGGAGTGTTTCATC+AGG - chr8_1:90595335-90595354 Msa1225250:three_prime_UTR 50.0%
GGGGGAATGATGAGAAGAAG+AGG - chr8_1:90595363-90595382 Msa1225250:three_prime_UTR 50.0%
GAAGAGGGTTTCTGTGAGTG+TGG - chr8_1:90595379-90595398 Msa1225250:three_prime_UTR 50.0%
!! GAGATTGGTGGTGTTGGTGT+TGG - chr8_1:90595533-90595552 Msa1225250:CDS 50.0%
!! GGTGTTGGTGTTGGTGATGT+AGG - chr8_1:90595542-90595561 Msa1225250:CDS 50.0%
!! GGTGTTGGTGATGTAGGGTA+TGG - chr8_1:90595548-90595567 Msa1225250:CDS 50.0%
TGGACAAGGTTTCCTCCAGA+AGG - chr8_1:90595865-90595884 Msa1225250:intron 50.0%
GGCGTAAACTTGGAACCTTC+TGG + chr8_1:90595883-90595902 None:intergenic 50.0%
! TTGATGGGGAGGCGTAAACT+TGG + chr8_1:90595893-90595912 None:intergenic 50.0%
GTTTACGCCTCCCCATCAAT+CGG - chr8_1:90595894-90595913 Msa1225250:intron 50.0%
! AAATCCACCGATTGATGGGG+AGG + chr8_1:90595904-90595923 None:intergenic 50.0%
ATGGAAAGACTACTGTCCCG+TGG - chr8_1:90595927-90595946 Msa1225250:intron 50.0%
!! GATTAGTTGGTGGCCATGTC+AGG - chr8_1:90596384-90596403 Msa1225250:intron 50.0%
ATCCTGATGAGCACCTGACA+TGG + chr8_1:90596400-90596419 None:intergenic 50.0%
CTTGAAACCAAGACTGCTCC+AGG + chr8_1:90596777-90596796 None:intergenic 50.0%
TGTGAGTTCCTGGAAGCAGA+GGG - chr8_1:90596916-90596935 Msa1225250:intron 50.0%
CCATTATTCCCTCTGCTTCC+AGG + chr8_1:90596927-90596946 None:intergenic 50.0%
CCTGGAAGCAGAGGGAATAA+TGG - chr8_1:90596924-90596943 Msa1225250:intron 50.0%
ATGACACTCAGGACACGAGA+TGG - chr8_1:90597150-90597169 Msa1225250:intron 50.0%
GACACGAGATGGATACCCAT+AGG - chr8_1:90597161-90597180 Msa1225250:intron 50.0%
! AAGAGTGCATACCGGCCTAT+GGG + chr8_1:90597179-90597198 None:intergenic 50.0%
CTCTTCTGCTTTCATCCACC+GGG - chr8_1:90597516-90597535 Msa1225250:CDS 50.0%
! CTTTGCTACTTGCATGCGCA+TGG + chr8_1:90597653-90597672 None:intergenic 50.0%
TGCGCATGCAAGTAGCAAAG+AGG - chr8_1:90597653-90597672 Msa1225250:intron 50.0%
GCGCATGCAAGTAGCAAAGA+GGG - chr8_1:90597654-90597673 Msa1225250:intron 50.0%
ATGAATTACTCCCTCCGTCC+CGG - chr8_1:90597719-90597738 Msa1225250:CDS 50.0%
GTCAATTAAACCGGGACGGA+GGG + chr8_1:90597732-90597751 None:intergenic 50.0%
!! ATGGTGGTTGGTAGGACTTG+AGG - chr8_1:90598150-90598169 Msa1225250:intron 50.0%
! GTTGGTAGGACTTGAGGCTT+AGG - chr8_1:90598156-90598175 Msa1225250:intron 50.0%
CTGGCATGTTAATTCCCAGC+CGG + chr8_1:90598406-90598425 None:intergenic 50.0%
GGATTGGATCAGCAGCAAAC+TGG - chr8_1:90598452-90598471 Msa1225250:intron 50.0%
TCTACCCCTTCAGAGAGTAG+CGG - chr8_1:90598485-90598504 Msa1225250:intron 50.0%
TCTCACCGCTACTCTCTGAA+GGG + chr8_1:90598493-90598512 None:intergenic 50.0%
ATCTCACCGCTACTCTCTGA+AGG + chr8_1:90598494-90598513 None:intergenic 50.0%
TCAACGGCTGAGATGGATGT+GGG + chr8_1:90598614-90598633 None:intergenic 50.0%
ATCAACGGCTGAGATGGATG+TGG + chr8_1:90598615-90598634 None:intergenic 50.0%
ATTGAGCCCTGGACCAACTT+TGG - chr8_1:90598724-90598743 Msa1225250:CDS 50.0%
TGAATGCATGTGGAGTGGGA+GGG - chr8_1:90599106-90599125 Msa1225250:CDS 50.0%
! GGTTTGGTATGTGAGAGCGA+TGG - chr8_1:90599590-90599609 Msa1225250:five_prime_UTR 50.0%
TGAAGGAGTAGAGGAGGAGG+AGG + chr8_1:90594604-90594623 None:intergenic 55.0%
CCACTGTATACGTCGCCGTT+TGG + chr8_1:90594855-90594874 None:intergenic 55.0%
CCAAACGGCGACGTATACAG+TGG - chr8_1:90594852-90594871 Msa1225250:three_prime_UTR 55.0%
GGAAACACACCACACGGCAA+AGG - chr8_1:90594885-90594904 Msa1225250:three_prime_UTR 55.0%
TCAGGGTCCATGGAAGGTTC+TGG - chr8_1:90595023-90595042 Msa1225250:three_prime_UTR 55.0%
! GGGAAGGGAGGTATATGTGG+AGG - chr8_1:90595177-90595196 Msa1225250:three_prime_UTR 55.0%
TGGGAGAATGGTGTGCCGAA+AGG - chr8_1:90595293-90595312 Msa1225250:three_prime_UTR 55.0%
GGGAGAATGGTGTGCCGAAA+GGG - chr8_1:90595294-90595313 Msa1225250:three_prime_UTR 55.0%
GGTGTGTTTACGTGGCGTGA+TGG - chr8_1:90595320-90595339 Msa1225250:three_prime_UTR 55.0%
TCTCCTGACCTAAGCTCTCG+AGG + chr8_1:90595823-90595842 None:intergenic 55.0%
ACTACTGTCCCGTGGTGTTC+AGG - chr8_1:90595935-90595954 Msa1225250:intron 55.0%
CTGTGAGTTCCTGGAAGCAG+AGG - chr8_1:90596915-90596934 Msa1225250:intron 55.0%
CGAGATGGATACCCATAGGC+CGG - chr8_1:90597165-90597184 Msa1225250:CDS 55.0%
! GAAGAGTGCATACCGGCCTA+TGG + chr8_1:90597180-90597199 None:intergenic 55.0%
GGTCAATTAAACCGGGACGG+AGG + chr8_1:90597733-90597752 None:intergenic 55.0%
ATGGGCCAGTTATTCCGGGA+CGG - chr8_1:90597928-90597947 Msa1225250:intron 55.0%
AGAGGACCTCTAATCCGGCT+GGG - chr8_1:90598389-90598408 Msa1225250:intron 55.0%
! GCGGAGAGAGTGTGTAAAGC+TGG - chr8_1:90598431-90598450 Msa1225250:intron 55.0%
! CTCACCGCTACTCTCTGAAG+GGG + chr8_1:90598492-90598511 None:intergenic 55.0%
CAACGGCTGAGATGGATGTG+GGG + chr8_1:90598613-90598632 None:intergenic 55.0%
CTTGGGATCAACGGCTGAGA+TGG + chr8_1:90598621-90598640 None:intergenic 55.0%
! CCCATGCCAAAGTTGGTCCA+GGG + chr8_1:90598733-90598752 None:intergenic 55.0%
CCCTGGACCAACTTTGGCAT+GGG - chr8_1:90598730-90598749 Msa1225250:CDS 55.0%
CCTGGACCAACTTTGGCATG+GGG - chr8_1:90598731-90598750 Msa1225250:CDS 55.0%
GTGTGTCCCCATGCCAAAGT+TGG + chr8_1:90598740-90598759 None:intergenic 55.0%
GGGGGACATCAGACATGACA+AGG - chr8_1:90598934-90598953 Msa1225250:CDS 55.0%
GTGAATGCATGTGGAGTGGG+AGG - chr8_1:90599105-90599124 Msa1225250:CDS 55.0%
AGTATTTGCCCCCACCACCA+TGG + chr8_1:90599144-90599163 None:intergenic 55.0%
CAGAATGAGGGGTCCTCTGT+AGG + chr8_1:90599303-90599322 None:intergenic 55.0%
TGGGAGCTTGATGGGGAAGC+TGG - chr8_1:90595443-90595462 Msa1225250:three_prime_UTR 60.0%
!! CTTCGGTGCCTCGAGAGCTT+AGG - chr8_1:90595812-90595831 Msa1225250:intron 60.0%
GTGCCTCGAGAGCTTAGGTC+AGG - chr8_1:90595817-90595836 Msa1225250:intron 60.0%
TACGCCTCCCCATCAATCGG+TGG - chr8_1:90595897-90595916 Msa1225250:intron 60.0%
ACTGTCCCGTGGTGTTCAGG+TGG - chr8_1:90595938-90595957 Msa1225250:intron 60.0%
GGCCATGTCAGGTGCTCATC+AGG - chr8_1:90596395-90596414 Msa1225250:intron 60.0%
CCAAGACTGCTCCAGGCGAA+AGG + chr8_1:90596770-90596789 None:intergenic 60.0%
CCTTTCGCCTGGAGCAGTCT+TGG - chr8_1:90596767-90596786 Msa1225250:intron 60.0%
GCCAGTTATTCCGGGACGGA+GGG - chr8_1:90597932-90597951 Msa1225250:intron 60.0%
TCCCTCCGTCCCGGAATAAC+TGG + chr8_1:90597936-90597955 None:intergenic 60.0%
GAATGCTACTCCCTCCGTCC+CGG + chr8_1:90597945-90597964 None:intergenic 60.0%
! CAGCCGGATTAGAGGTCCTC+TGG + chr8_1:90598390-90598409 None:intergenic 60.0%
CAGAGGACCTCTAATCCGGC+TGG - chr8_1:90598388-90598407 Msa1225250:intron 60.0%
CACACTCTCTCCGCTCTTGC+TGG + chr8_1:90598425-90598444 None:intergenic 60.0%
GCCCTGGACCAACTTTGGCA+TGG - chr8_1:90598729-90598748 Msa1225250:CDS 60.0%
! CCCCATGCCAAAGTTGGTCC+AGG + chr8_1:90598734-90598753 None:intergenic 60.0%
GGCCAGTTATTCCGGGACGG+AGG - chr8_1:90597931-90597950 Msa1225250:intron 65.0%
GTTCGCGGTGGTCGACGGCA+TGG + chr8_1:90594795-90594814 None:intergenic 70.0%
GCCGTCGACCACCGCGAACA+CGG - chr8_1:90594796-90594815 Msa1225250:three_prime_UTR 70.0%
GCCGTGTTCGCGGTGGTCGA+CGG + chr8_1:90594800-90594819 None:intergenic 70.0%
GGTGACACGCGCCGTGTTCG+CGG + chr8_1:90594810-90594829 None:intergenic 70.0%
GACACGCGCCGTGTTCGCGG+TGG + chr8_1:90594807-90594826 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 90594379 90599815 90594379 ID=Msa1225250;Name=Msa1225250
chr8_1 mRNA 90594379 90599815 90594379 ID=Msa1225250-mRNA-1;Parent=Msa1225250;Name=Msa1225250-mRNA-1;_AED=0.07;_eAED=0.07;_QI=317|1|1|1|1|1|8|1118|707
chr8_1 exon 90594379 90595803 90594379 ID=Msa1225250-mRNA-1:exon:33037;Parent=Msa1225250-mRNA-1
chr8_1 exon 90597008 90597065 90597008 ID=Msa1225250-mRNA-1:exon:33036;Parent=Msa1225250-mRNA-1
chr8_1 exon 90597164 90597294 90597164 ID=Msa1225250-mRNA-1:exon:33035;Parent=Msa1225250-mRNA-1
chr8_1 exon 90597388 90597581 90597388 ID=Msa1225250-mRNA-1:exon:33034;Parent=Msa1225250-mRNA-1
chr8_1 exon 90597678 90597788 90597678 ID=Msa1225250-mRNA-1:exon:33033;Parent=Msa1225250-mRNA-1
chr8_1 exon 90597954 90598119 90597954 ID=Msa1225250-mRNA-1:exon:33032;Parent=Msa1225250-mRNA-1
chr8_1 exon 90598238 90598402 90598238 ID=Msa1225250-mRNA-1:exon:33031;Parent=Msa1225250-mRNA-1
chr8_1 exon 90598507 90599815 90598507 ID=Msa1225250-mRNA-1:exon:33030;Parent=Msa1225250-mRNA-1
chr8_1 five_prime_UTR 90599499 90599815 90599499 ID=Msa1225250-mRNA-1:five_prime_utr;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90598507 90599498 90598507 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90598238 90598402 90598238 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90597954 90598119 90597954 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90597678 90597788 90597678 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90597388 90597581 90597388 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90597164 90597294 90597164 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90597008 90597065 90597008 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 CDS 90595497 90595803 90595497 ID=Msa1225250-mRNA-1:cds;Parent=Msa1225250-mRNA-1
chr8_1 three_prime_UTR 90594379 90595496 90594379 ID=Msa1225250-mRNA-1:three_prime_utr;Parent=Msa1225250-mRNA-1
Gene Sequence

>Msa1225250

ATGCAAGAAACATTATTAACTATTTCGGAGCACCACCACCAAAACACAAATGCAAAGAAAAACGAGGAAATGGAAGTAGTAATAGTATCATCATCACCATGCCGTCGACCACCGCGAACACGGCGCGTGTCACCGACGCCAGTAGAAAAACACCTTCCAAACGGCGACGTATACAGTGGAAGTTTATCAGGAAACACACCACACGGCAAAGGTAAATACGTATGGAACGATGGATGCATGTACCAAGGAGAATGGAAGAAAGGTAAAGCATGGGGGAAAGGGAAATTCTCATGGCCATCAGGAGCTACTTATGAAGGTGATTTTATTTCAGGGTCCATGGAAGGTTCTGGAACTTTTGTTGGTGTGGAAGGTGATACTTATAAAGGTTCTTGGGTTTCTGATAGGAAACATGGGTTTGGTGAGAAATGTTATGCTAATGGTGATGTGTATGAGGGATGGTGGAGGTGCAATTTGCAAGATGGGGAAGGGAGGTATATGTGGAGGAATGGGAATGAGTATGTTGGTGAATGGAAATGTGGTGCTATATGTGGTAATGGTGTTTTGATTTGGAAGAATGGGAATCGTTATGTGGGTTGTTGGGAGAATGGTGTGCCGAAAGGGAAAGGTGTGTTTACGTGGCGTGATGGGAGTGTTTCATCAGGGAATTGGGGGAATGATGAGAAGAAGAGGGTTTCTGTGAGTGTGGATGATGGTTCTAAGAGTGTGGTTTTTCCTAGGATTTGTATTTGGGAGCTTGATGGGGAAGCTGGTGATATTACTTGTGATATTGTTGATAATGTGGAAGCTTGTATGTTTTATAGAGATGGAAGTGAATCAGAGATTGGTGGTGTTGGTGTTGGTGATGTAGGGTATGGACATTCACAGAAGAGTCCTTGTTATTCGATCGATGGGGATGTTAAGAAACCGGGTTATACTGTTTGTAAGGGACATAAGAACTATGATTTGATTCTTAATCTTCAATTGGGTATTAGATATTGTGTTGGGAAGCATGCTTCGGTGCCTCGAGAGCTTAGGTCAGGAGATTTTGATCCAAAGGAGAAATTCTGGACAAGGTTTCCTCCAGAAGGTTCCAAGTTTACGCCTCCCCATCAATCGGTGGATTTTAGATGGAAAGACTACTGTCCCGTGGTGTTCAGGCATTTGAGGGAATTATTTGCGATTGATCCTGCCGATTACATGCTTGCTATTTGTGGCAATGATACATTGAGGGAAATGTCTTCTCCTGGAAAAAGTGGAAGCTTCTTTTACCTTACTCAAGATGACCGATTTGTAATCAAAACCTTGAAGAAGTCTGAAGTCAAGGTGCTCATCAGGATGCTTCCCAGTTACTATCAACATGTTTCTCAGTACAAGAACTCGTTGGTTACGAAATTCCTGGGAGTTCATTGTGTCAAACCTATTGGAGGCCAAAAGACCCGATTTATTGTAATGGGCAATGTGTTTTGTTCGGAGTATCGAATTCATAAGCGATTTGACCTCAAAGGTTCATCTCATGGTCGGACAACCGATAAACTCCGTAAGGATATTGATGAGACTACTACTCTTAAAGACCTTGATCTTAGTTTTGCCTTTCGCCTGGAGCAGTCTTGGTTTCAAGAGCTAAAATGGCAACTTGATAGAGACTGTGAGTTCCTGGAAGCAGAGGGAATAATGGACTACAGTTTTCTCATTGGCCTTCATTTTCGTGATGATTACTCATCGGATGAAATGAAAAGTTCACCTAATGAATTGTGTTCTGGCAAGAGAGACATGCAAAATGATGACACTCAGGACACGAGATGGATACCCATAGGCCGAGGACCTCTAATCCGGCTGGGAATTAACATGCCAGCAAGAGCGGAGAGAGTGTGTAAAGCTGGATTGGATCAGCAGCAAACTGGAAGTAGCAAATCTACCCCTTCAGAGAGTAGCGGTGAGATCTCTGATGTAATCCTTTATTTTGGCATCATTGACATTCTCCAAGATTATGATATTAGCAAAAAGCTAGAGCATGCATACAAGTCACTACAAGTGGACCCCACATCCATCTCAGCCGTTGATCCCAAGCTATATTCCAAAAGGTTTAGGGATTTCATACACAGAATCTTTGTGGAGGACAAATAA
Protein sequence

>Msa1225250

MQETLLTISEHHHQNTNAKKNEEMEVVIVSSSPCRRPPRTRRVSPTPVEKHLPNGDVYSGSLSGNTPHGKGKYVWNDGCMYQGEWKKGKAWGKGKFSWPSGATYEGDFISGSMEGSGTFVGVEGDTYKGSWVSDRKHGFGEKCYANGDVYEGWWRCNLQDGEGRYMWRNGNEYVGEWKCGAICGNGVLIWKNGNRYVGCWENGVPKGKGVFTWRDGSVSSGNWGNDEKKRVSVSVDDGSKSVVFPRICIWELDGEAGDITCDIVDNVEACMFYRDGSESEIGGVGVGDVGYGHSQKSPCYSIDGDVKKPGYTVCKGHKNYDLILNLQLGIRYCVGKHASVPRELRSGDFDPKEKFWTRFPPEGSKFTPPHQSVDFRWKDYCPVVFRHLRELFAIDPADYMLAICGNDTLREMSSPGKSGSFFYLTQDDRFVIKTLKKSEVKVLIRMLPSYYQHVSQYKNSLVTKFLGVHCVKPIGGQKTRFIVMGNVFCSEYRIHKRFDLKGSSHGRTTDKLRKDIDETTTLKDLDLSFAFRLEQSWFQELKWQLDRDCEFLEAEGIMDYSFLIGLHFRDDYSSDEMKSSPNELCSGKRDMQNDDTQDTRWIPIGRGPLIRLGINMPARAERVCKAGLDQQQTGSSKSTPSESSGEISDVILYFGIIDILQDYDISKKLEHAYKSLQVDPTSISAVDPKLYSKRFRDFIHRIFVEDK*