Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477020 | XP_003603440.1 | 98.307 | 709 | 11 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1436 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477020 | sp|O78328|DXS_CAPAN | 61.985 | 655 | 243 | 4 | 58 | 707 | 65 | 718 | 0.0 | 811 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477020 | G7JBM5 | 98.307 | 709 | 11 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1436 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030180 | Msa0477020 | 0.801191 | 1.011491e-48 | -8.615850e-47 |
| Msa0031360 | Msa0477020 | 0.819974 | 8.760698e-53 | -8.615850e-47 |
| Msa0072000 | Msa0477020 | 0.802534 | 5.359197e-49 | -8.615850e-47 |
| Msa0076670 | Msa0477020 | 0.808954 | 2.402807e-50 | -8.615850e-47 |
| Msa0079400 | Msa0477020 | 0.801699 | 7.958685e-49 | -8.615850e-47 |
| Msa0171300 | Msa0477020 | 0.840081 | 1.077957e-57 | -8.615850e-47 |
| Msa0193890 | Msa0477020 | 0.827130 | 1.853826e-54 | -8.615850e-47 |
| Msa0226890 | Msa0477020 | 0.805831 | 1.103945e-49 | -8.615850e-47 |
| Msa0382870 | Msa0477020 | 0.977546 | 5.358633e-144 | -8.615850e-47 |
| Msa0388960 | Msa0477020 | 0.812911 | 3.340459e-51 | -8.615850e-47 |
| Msa0422500 | Msa0477020 | 0.820348 | 7.194668e-53 | -8.615850e-47 |
| Msa0432930 | Msa0477020 | 0.983331 | 1.877004e-157 | -8.615850e-47 |
| Msa0439970 | Msa0477020 | 0.803098 | 4.099348e-49 | -8.615850e-47 |
| Msa0450350 | Msa0477020 | 0.820662 | 6.091743e-53 | -8.615850e-47 |
| Msa0477020 | Msa0484780 | 0.800604 | 1.333410e-48 | -8.615850e-47 |
| Msa0477020 | Msa0492880 | 0.803073 | 4.149012e-49 | -8.615850e-47 |
| Msa0477020 | Msa0511250 | 0.813373 | 2.645607e-51 | -8.615850e-47 |
| Msa0477020 | Msa0554050 | 0.800986 | 1.113956e-48 | -8.615850e-47 |
| Msa0477020 | Msa0623080 | 0.800870 | 1.176542e-48 | -8.615850e-47 |
| Msa0477020 | Msa0626280 | 0.833064 | 6.607962e-56 | -8.615850e-47 |
| Msa0477020 | Msa0664570 | 0.810578 | 1.075146e-50 | -8.615850e-47 |
| Msa0477020 | Msa0702350 | 0.801521 | 8.660002e-49 | -8.615850e-47 |
| Msa0477020 | Msa0828660 | 0.819563 | 1.087656e-52 | -8.615850e-47 |
| Msa0477020 | Msa0908050 | 0.801483 | 8.814644e-49 | -8.615850e-47 |
| Msa0477020 | Msa0915770 | 0.815531 | 8.812623e-52 | -8.615850e-47 |
| Msa0477020 | Msa0915800 | 0.814849 | 1.249137e-51 | -8.615850e-47 |
| Msa0477020 | Msa0915830 | 0.805359 | 1.386511e-49 | -8.615850e-47 |
| Msa0477020 | Msa1028270 | 0.821098 | 4.837623e-53 | -8.615850e-47 |
| Msa0477020 | Msa1030970 | 0.802435 | 5.617869e-49 | -8.615850e-47 |
| Msa0477020 | Msa1046300 | 0.806482 | 8.050254e-50 | -8.615850e-47 |
| Msa0477020 | Msa1082500 | 0.805066 | 1.597140e-49 | -8.615850e-47 |
| Msa0477020 | Msa1165520 | 0.814764 | 1.304911e-51 | -8.615850e-47 |
| Msa0477020 | Msa1179940 | 0.815232 | 1.027476e-51 | -8.615850e-47 |
| Msa0477020 | Msa1179970 | 0.819485 | 1.132822e-52 | -8.615850e-47 |
| Msa0477020 | Msa1224830 | 0.801711 | 7.916177e-49 | -8.615850e-47 |
| Msa0477020 | Msa1229600 | 0.838669 | 2.506931e-57 | -8.615850e-47 |
| Msa0477020 | Msa1262750 | 0.815612 | 8.455850e-52 | -8.615850e-47 |
| Msa0477020 | Msa1282500 | 0.808962 | 2.393133e-50 | -8.615850e-47 |
| Msa0477020 | Msa1310210 | 0.829106 | 6.195383e-55 | -8.615850e-47 |
| Msa0477020 | Msa1313150 | 0.810904 | 9.141182e-51 | -8.615850e-47 |
| Msa0477020 | Msa1332000 | 0.813369 | 2.650669e-51 | -8.615850e-47 |
| Msa0477020 | Msa1371310 | 0.981429 | 1.441645e-152 | -8.615850e-47 |
| Msa0477020 | Msa1393410 | 0.836806 | 7.539942e-57 | -8.615850e-47 |
| Msa0477020 | Msa1423880 | 0.808548 | 2.933638e-50 | -8.615850e-47 |
| Msa0477020 | Msa1424680 | 0.803205 | 3.896198e-49 | -8.615850e-47 |
| Msa0477020 | Msa1435420 | 0.836527 | 8.883074e-57 | -8.615850e-47 |
| Msa0335040 | Msa0477020 | 0.802334 | 5.894407e-49 | -8.615850e-47 |
| Msa0344590 | Msa0477020 | 0.816130 | 6.481688e-52 | -8.615850e-47 |
| Msa0350870 | Msa0477020 | 0.801167 | 1.023259e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477020 | MtrunA17_Chr3g0138171 | 98.307 | 709 | 11 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1436 |
| Msa0477020 | MtrunA17_Chr4g0066611 | 61.457 | 659 | 246 | 4 | 55 | 707 | 60 | 716 | 0.0 | 820 |
| Msa0477020 | MtrunA17_Chr2g0286641 | 57.589 | 672 | 274 | 6 | 44 | 709 | 50 | 716 | 0.0 | 776 |
| Msa0477020 | MtrunA17_Chr8g0367201 | 56.555 | 656 | 275 | 5 | 58 | 706 | 58 | 710 | 0.0 | 753 |
| Msa0477020 | MtrunA17_Chr8g0367181 | 56.707 | 656 | 274 | 5 | 58 | 706 | 58 | 710 | 0.0 | 752 |
| Msa0477020 | MtrunA17_Chr7g0214101 | 27.468 | 233 | 142 | 8 | 422 | 635 | 66 | 290 | 1.68e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0477020 | AT5G11380.1 | 68.398 | 693 | 192 | 5 | 19 | 707 | 30 | 699 | 0.0 | 959 |
| Msa0477020 | AT4G15560.1 | 59.639 | 664 | 257 | 5 | 49 | 704 | 56 | 716 | 0.0 | 797 |
| Msa0477020 | AT3G21500.3 | 55.224 | 670 | 260 | 5 | 41 | 704 | 39 | 674 | 0.0 | 733 |
| Msa0477020 | AT5G11380.3 | 64.632 | 557 | 170 | 5 | 19 | 571 | 30 | 563 | 0.0 | 723 |
| Msa0477020 | AT5G11380.2 | 65.209 | 549 | 164 | 5 | 19 | 563 | 30 | 555 | 0.0 | 720 |
| Msa0477020 | AT5G11380.4 | 65.844 | 527 | 153 | 5 | 19 | 541 | 30 | 533 | 0.0 | 692 |
| Msa0477020 | AT3G21500.1 | 54.167 | 624 | 247 | 5 | 41 | 659 | 39 | 628 | 0.0 | 667 |
| Msa0477020 | AT3G21500.2 | 54.080 | 625 | 247 | 5 | 41 | 659 | 39 | 629 | 0.0 | 667 |
| Msa0477020 | AT5G50850.1 | 29.130 | 230 | 142 | 8 | 422 | 635 | 74 | 298 | 5.76e-14 | 74.7 |
Find 193 sgRNAs with CRISPR-Local
Find 601 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATGCTTCGTGTCCTTTC+CGG | 0.206226 | 3_3:+81092735 | Msa0477020:three_prime_UTR |
| AAACTTTCGGAAAGATTTAC+TGG | 0.231822 | 3_3:-81086571 | None:intergenic |
| TGATTCTGGAAAGGGGAAAT+TGG | 0.233981 | 3_3:-81085520 | None:intergenic |
| AGAATGCAAAAGGCTTTATT+AGG | 0.238114 | 3_3:+81092777 | Msa0477020:three_prime_UTR |
| GCCGTCACTTAAACTGTTTA+TGG | 0.240402 | 3_3:+81090593 | Msa0477020:CDS |
| TCTTCAAGAAGTAGCTTCTT+TGG | 0.252475 | 3_3:+81089324 | Msa0477020:CDS |
| TGCCACAGCATTGAGTTTGC+TGG | 0.261355 | 3_3:+81092665 | Msa0477020:CDS |
| CACGCTGTCACATTTGCTTC+TGG | 0.266276 | 3_3:+81090660 | Msa0477020:CDS |
| GAAAGAACATTTCCATCGTT+TGG | 0.276127 | 3_3:-81085236 | None:intergenic |
| CATTCACTTCTTGCAAATCT+TGG | 0.276684 | 3_3:+81092192 | Msa0477020:CDS |
| AGGTTACTTGGACTCAAATT+TGG | 0.278392 | 3_3:+81086446 | Msa0477020:CDS |
| AGAAGAATACAAGGTGATTC+TGG | 0.295885 | 3_3:-81085534 | None:intergenic |
| GCTCAATTTATTGCTCTTGA+TGG | 0.301990 | 3_3:+81092348 | Msa0477020:CDS |
| GGTAAAGATGTTGCCTTATT+GGG | 0.306782 | 3_3:+81092135 | Msa0477020:CDS |
| GAAGGGTCTATTGGAGGATT+TGG | 0.309133 | 3_3:+81092315 | Msa0477020:CDS |
| GGTGCCATGACAATCATATT+TGG | 0.314187 | 3_3:-81091776 | None:intergenic |
| GTCATAGGCTCTCTGTAAAA+AGG | 0.315685 | 3_3:-81090727 | None:intergenic |
| TCTCTCTAGCTTCACTCCTT+TGG | 0.320738 | 3_3:+81085257 | Msa0477020:five_prime_UTR |
| GTCTTTGTCTTTCTCAGCTT+CGG | 0.321151 | 3_3:-81090538 | None:intergenic |
| TAGCAGCTTCTCTAAACTTT+CGG | 0.328548 | 3_3:-81086584 | None:intergenic |
| AGGTAAAGATGTTGCCTTAT+TGG | 0.329622 | 3_3:+81092134 | Msa0477020:CDS |
| AGCAATCCAATCTGCGAGTT+AGG | 0.330179 | 3_3:-81085490 | None:intergenic |
| ACTTCTCGACCGAAGAATTA+AGG | 0.337143 | 3_3:+81092371 | Msa0477020:CDS |
| ATACTAACATAGGTATAATA+TGG | 0.338315 | 3_3:+81093014 | Msa0477020:three_prime_UTR |
| CTACTCTATTTGAAGAGCTT+GGG | 0.339586 | 3_3:+81089248 | Msa0477020:CDS |
| AATATTACTGAATCCTAGTA+TGG | 0.348105 | 3_3:+81085748 | Msa0477020:CDS |
| CGTTGGTCAATTACCTCAAT+TGG | 0.351062 | 3_3:-81091923 | None:intergenic |
| CCAATCTGCGAGTTAGGGTT+TGG | 0.351819 | 3_3:-81085484 | None:intergenic |
| TGTTATAACTGATGAAAATC+AGG | 0.353490 | 3_3:+81089372 | Msa0477020:CDS |
| GGATTCAATGGGTCCTGTCT+TGG | 0.353501 | 3_3:+81089345 | Msa0477020:CDS |
| AGATGCTTCGTGTCCTTTCC+GGG | 0.354269 | 3_3:+81092736 | Msa0477020:three_prime_UTR |
| TATCCTAGGGGTGCCTTGGT+TGG | 0.359144 | 3_3:+81091872 | Msa0477020:CDS |
| CAGTTTGCTTTCGGTATCCT+AGG | 0.359222 | 3_3:+81091858 | Msa0477020:CDS |
| CATTGATCCATATCCCAATA+AGG | 0.366694 | 3_3:-81092148 | None:intergenic |
| GCAGTTGCAAGGGATATTAA+AGG | 0.367112 | 3_3:+81086345 | Msa0477020:CDS |
| TATGCACATAAGATACTTAC+AGG | 0.367465 | 3_3:+81085983 | Msa0477020:CDS |
| GATGTTGCCTTATTGGGATA+TGG | 0.373978 | 3_3:+81092141 | Msa0477020:CDS |
| ACAGAAAATTGCAAGTGTTA+AGG | 0.376757 | 3_3:+81093106 | Msa0477020:three_prime_UTR |
| AGTAGCTTCTTTGGATTCAA+TGG | 0.378602 | 3_3:+81089333 | Msa0477020:CDS |
| CACAATTCACAAACACATAA+AGG | 0.378697 | 3_3:-81092709 | None:intergenic |
| TCGATATTGTGTCCATCCAC+TGG | 0.382005 | 3_3:-81089286 | None:intergenic |
| AACTAATTACCTTAATTCTT+CGG | 0.383912 | 3_3:-81092380 | None:intergenic |
| ACCGTTGAGGAAGGGTCTAT+TGG | 0.384406 | 3_3:+81092306 | Msa0477020:CDS |
| ATGATCAACCAGTTTGCTTT+CGG | 0.387179 | 3_3:+81091849 | Msa0477020:CDS |
| GAAGAAGGTATAATGCAAAA+TGG | 0.389504 | 3_3:-81090705 | None:intergenic |
| TTTGAAGATTTGAGTAATGA+TGG | 0.391316 | 3_3:+81085418 | Msa0477020:exon |
| GCTTGGTTAAGCTGTTGATT+TGG | 0.391371 | 3_3:-81092618 | None:intergenic |
| CTTGAAGAACCTTTCTCAGC+AGG | 0.397023 | 3_3:+81085664 | Msa0477020:CDS |
| GATTCTGGAAAGGGGAAATT+GGG | 0.398441 | 3_3:-81085519 | None:intergenic |
| ACTTTCGTTAACACTGTGTT+TGG | 0.402572 | 3_3:-81085291 | None:intergenic |
| ATCCTAGGGGTGCCTTGGTT+GGG | 0.404456 | 3_3:+81091873 | Msa0477020:CDS |
| TCTACTCTATTTGAAGAGCT+TGG | 0.406045 | 3_3:+81089247 | Msa0477020:CDS |
| TTAGTTCTGATTTGCATGTC+TGG | 0.406158 | 3_3:+81092831 | Msa0477020:three_prime_UTR |
| CCAAACCCTAACTCGCAGAT+TGG | 0.406186 | 3_3:+81085484 | Msa0477020:CDS |
| CGAGTGATCAAAACAGATTA+TGG | 0.410982 | 3_3:+81085325 | Msa0477020:five_prime_UTR |
| CTGATATTGATGATTTCTAC+TGG | 0.411312 | 3_3:+81085594 | Msa0477020:CDS |
| TCCCACAATATCTTGTCAAC+TGG | 0.413014 | 3_3:-81085815 | None:intergenic |
| ATAAGTATGAACCTGGTCAT+AGG | 0.419660 | 3_3:-81090742 | None:intergenic |
| GACATTGTGGTTGTTCATGC+AGG | 0.429229 | 3_3:+81090558 | Msa0477020:CDS |
| TGATTGCTTTGTGGAGAGTT+TGG | 0.431702 | 3_3:+81090512 | Msa0477020:CDS |
| GTTTCAACTCCTGCTGAGAA+AGG | 0.438184 | 3_3:-81085673 | None:intergenic |
| GAGAGTGAATACGATGCATT+TGG | 0.440095 | 3_3:+81086070 | Msa0477020:CDS |
| AATGAGCAATGCAGGTTACT+TGG | 0.443326 | 3_3:+81086434 | Msa0477020:CDS |
| TAACTGTCTGGTAAAACAAT+TGG | 0.443341 | 3_3:-81092579 | None:intergenic |
| CTTATTGGGATATGGATCAA+TGG | 0.444909 | 3_3:+81092149 | Msa0477020:CDS |
| CTTAACCAAGCAGGGTTGAC+TGG | 0.445093 | 3_3:+81092630 | Msa0477020:CDS |
| TCGGTATCCTAGGGGTGCCT+TGG | 0.446965 | 3_3:+81091868 | Msa0477020:CDS |
| ATACAAGGTGATTCTGGAAA+GGG | 0.448453 | 3_3:-81085528 | None:intergenic |
| CAATCTGCGAGTTAGGGTTT+GGG | 0.451051 | 3_3:-81085483 | None:intergenic |
| TACTGGATTGGAGCCTGCTA+AGG | 0.451075 | 3_3:-81086554 | None:intergenic |
| GAATGGAAAGGGATCACAAA+TGG | 0.451871 | 3_3:-81085461 | None:intergenic |
| AGGTCCACCACAGCCATACT+AGG | 0.452040 | 3_3:-81085761 | None:intergenic |
| CAGTAGAAATCATCAATATC+AGG | 0.455874 | 3_3:-81085593 | None:intergenic |
| AAAAGAGTGTCAAATAGAAA+GGG | 0.457000 | 3_3:+81092892 | Msa0477020:three_prime_UTR |
| TTCGGAAAGATTTACTGGAT+TGG | 0.457275 | 3_3:-81086566 | None:intergenic |
| GAAAAGAGTGTCAAATAGAA+AGG | 0.459905 | 3_3:+81092891 | Msa0477020:three_prime_UTR |
| TCTTGCAAATCTTGGCATTG+AGG | 0.460171 | 3_3:+81092200 | Msa0477020:CDS |
| GCATTCTCAATTTACGAGAC+TGG | 0.461722 | 3_3:-81092975 | None:intergenic |
| TAGTTGCAGTTATCAGCAAT+TGG | 0.468844 | 3_3:+81086382 | Msa0477020:CDS |
| GTAGCTTCTTTGGATTCAAT+GGG | 0.476127 | 3_3:+81089334 | Msa0477020:CDS |
| GCAATCCAATCTGCGAGTTA+GGG | 0.477857 | 3_3:-81085489 | None:intergenic |
| AAATAGAAGACAACTCTAAA+CGG | 0.479369 | 3_3:-81085712 | None:intergenic |
| GCTGGTCGGCTTCAAACATA+TGG | 0.480453 | 3_3:+81090489 | Msa0477020:CDS |
| GCCACAGCATTGAGTTTGCT+GGG | 0.483694 | 3_3:+81092666 | Msa0477020:CDS |
| CTAGGATACCGAAAGCAAAC+TGG | 0.484097 | 3_3:-81091857 | None:intergenic |
| TTAGGGTTTGGGAATGGAAA+GGG | 0.485075 | 3_3:-81085472 | None:intergenic |
| AAGGGAAGAATTCTTGTTGA+AGG | 0.485127 | 3_3:+81092114 | Msa0477020:CDS |
| AGTTTGCTTTCGGTATCCTA+GGG | 0.492401 | 3_3:+81091859 | Msa0477020:CDS |
| TCTGATTTGTTAGACAATGC+TGG | 0.494059 | 3_3:+81090471 | Msa0477020:CDS |
| TGTCATTACAAGTGCAGGAT+TGG | 0.494629 | 3_3:+81091694 | Msa0477020:CDS |
| AGCAATTGGACAACTATGTC+TGG | 0.495383 | 3_3:+81086396 | Msa0477020:CDS |
| GCCTCAGAAGCTCGATGTCA+AGG | 0.495419 | 3_3:-81092254 | None:intergenic |
| AACATATGGTGATTGCTTTG+TGG | 0.497898 | 3_3:+81090503 | Msa0477020:CDS |
| AGGATAGAGCTTCACGAGTA+CGG | 0.499924 | 3_3:-81092689 | None:intergenic |
| CAGTTGCAAGGGATATTAAA+GGG | 0.501421 | 3_3:+81086346 | Msa0477020:CDS |
| TGAATATGCTCGTGGTATGA+TGG | 0.502051 | 3_3:+81089213 | Msa0477020:CDS |
| GGTCAATTTGTCGTCTCATA+CGG | 0.503022 | 3_3:+81085346 | Msa0477020:five_prime_UTR |
| CAACGGTAATTAGAAAAGAA+TGG | 0.504355 | 3_3:-81092290 | None:intergenic |
| AAGAGAACCAAGAATGCAAA+AGG | 0.509689 | 3_3:+81092767 | Msa0477020:three_prime_UTR |
| TTGAAGATTTGAGTAATGAT+GGG | 0.518387 | 3_3:+81085419 | Msa0477020:exon |
| ATTCATACACAGATTGGAAA+GGG | 0.519161 | 3_3:+81092096 | Msa0477020:intron |
| GGATGCAACAGTATATCTGC+TGG | 0.522802 | 3_3:+81086103 | Msa0477020:CDS |
| TTCAGGAATGGCAGTTGCAA+GGG | 0.523513 | 3_3:+81086335 | Msa0477020:intron |
| TTACTTGGACTCAAATTTGG+TGG | 0.523809 | 3_3:+81086449 | Msa0477020:CDS |
| TGCGAGTTAGGGTTTGGGAA+TGG | 0.525876 | 3_3:-81085478 | None:intergenic |
| TTTCTAATTACCGTTGAGGA+AGG | 0.526295 | 3_3:+81092297 | Msa0477020:CDS |
| CTCTATCTAGTACCCTTAGC+AGG | 0.526339 | 3_3:+81086541 | Msa0477020:CDS |
| TTGGACAACTATGTCTGGCC+AGG | 0.526907 | 3_3:+81086401 | Msa0477020:CDS |
| AATGGAAAGGGATCACAAAT+GGG | 0.527413 | 3_3:-81085460 | None:intergenic |
| CGATATTGTGTCCATCCACT+GGG | 0.527659 | 3_3:-81089285 | None:intergenic |
| CGTGGTATGATGGGTCCACC+AGG | 0.528974 | 3_3:+81089223 | Msa0477020:CDS |
| GATGCATTTGGTGCAGGTCA+TGG | 0.529726 | 3_3:+81086082 | Msa0477020:CDS |
| CTCCAGTTGACAAGATATTG+TGG | 0.529849 | 3_3:+81085813 | Msa0477020:CDS |
| TGGTTCTCTTATGCACATCC+CGG | 0.530981 | 3_3:-81092754 | None:intergenic |
| ATTACAAGTGCAGGATTGGT+AGG | 0.531830 | 3_3:+81091698 | Msa0477020:CDS |
| AAAGGTTCTTCAAGCAAAGA+GGG | 0.533111 | 3_3:-81085655 | None:intergenic |
| AATCAACAGCTTAACCAAGC+AGG | 0.533615 | 3_3:+81092621 | Msa0477020:CDS |
| CCTCAGAAGCTCGATGTCAA+GGG | 0.536808 | 3_3:-81092253 | None:intergenic |
| TTTCAGGAATGGCAGTTGCA+AGG | 0.538184 | 3_3:+81086334 | Msa0477020:intron |
| TATGAGGCAATGAGCAATGC+AGG | 0.539433 | 3_3:+81086426 | Msa0477020:CDS |
| GTTATAACATGAACCAAGAC+AGG | 0.540223 | 3_3:-81089358 | None:intergenic |
| GCATGTTCAATATAACTGTC+TGG | 0.540461 | 3_3:-81092591 | None:intergenic |
| TCTAGAAGAAGAAGAATACA+AGG | 0.540511 | 3_3:-81085543 | None:intergenic |
| CAGGGTGTTACAAAACGTAT+TGG | 0.541232 | 3_3:+81089157 | Msa0477020:intron |
| TGCTCATTGCCTCATAGACC+TGG | 0.542521 | 3_3:-81086419 | None:intergenic |
| CCCTTGACATCGAGCTTCTG+AGG | 0.543920 | 3_3:+81092253 | Msa0477020:CDS |
| AACAGTATATCTGCTGGACT+TGG | 0.544844 | 3_3:+81086109 | Msa0477020:CDS |
| AATGGTTCAGAACTGTCTAA+AGG | 0.546738 | 3_3:+81092167 | Msa0477020:CDS |
| GTTGAGGAAGGGTCTATTGG+AGG | 0.546973 | 3_3:+81092309 | Msa0477020:CDS |
| ATCAAATGCTCCACACTGGA+GGG | 0.547141 | 3_3:-81091732 | None:intergenic |
| CAAATGCACGCTAAATCACT+TGG | 0.547266 | 3_3:-81093155 | None:intergenic |
| GAATACGATGCATTTGGTGC+AGG | 0.548872 | 3_3:+81086076 | Msa0477020:CDS |
| TTGAACATTGTTCCAAACGA+TGG | 0.549914 | 3_3:+81085224 | None:intergenic |
| GAGCAATAAATTGAGCAACA+TGG | 0.551323 | 3_3:-81092341 | None:intergenic |
| AGCAATAAATTGAGCAACAT+GGG | 0.552047 | 3_3:-81092340 | None:intergenic |
| TCCATAAACAGTTTAAGTGA+CGG | 0.557677 | 3_3:-81090594 | None:intergenic |
| AAAGTTTAGAGAAGCTGCTA+AGG | 0.557892 | 3_3:+81086587 | Msa0477020:CDS |
| GCTTCTGGTTTATCATGTGG+TGG | 0.559580 | 3_3:+81090675 | Msa0477020:CDS |
| TATTCATACACAGATTGGAA+AGG | 0.566531 | 3_3:+81092095 | Msa0477020:intron |
| GCAGGATTGGTAGGTTCAGA+TGG | 0.569526 | 3_3:+81091707 | Msa0477020:CDS |
| GAGCTTGGGTTGTATTACAT+AGG | 0.570421 | 3_3:+81089262 | Msa0477020:CDS |
| GAATATGCTCGTGGTATGAT+GGG | 0.571731 | 3_3:+81089214 | Msa0477020:CDS |
| TTCTAATTACCGTTGAGGAA+GGG | 0.573324 | 3_3:+81092298 | Msa0477020:CDS |
| ATCAACAGCTTAACCAAGCA+GGG | 0.577584 | 3_3:+81092622 | Msa0477020:CDS |
| ATACATAACTGACAAGCAGC+AGG | 0.578705 | 3_3:+81089417 | Msa0477020:CDS |
| TGATATTGATGATTTCTACT+GGG | 0.582897 | 3_3:+81085595 | Msa0477020:CDS |
| AATACAAGGTGATTCTGGAA+AGG | 0.583871 | 3_3:-81085529 | None:intergenic |
| CTTGTAATGACAAAACGCAC+TGG | 0.585950 | 3_3:-81091683 | None:intergenic |
| TCCAATAGACCCTTCCTCAA+CGG | 0.587245 | 3_3:-81092307 | None:intergenic |
| TTTGCTTCTGGTTTATCATG+TGG | 0.587877 | 3_3:+81090672 | Msa0477020:CDS |
| ACTGGATTGGAGCCTGCTAA+GGG | 0.588415 | 3_3:-81086553 | None:intergenic |
| ACATGATGGAATTCCAATTG+AGG | 0.588705 | 3_3:+81091910 | Msa0477020:CDS |
| GAAAGGTTCTTCAAGCAAAG+AGG | 0.590345 | 3_3:-81085656 | None:intergenic |
| CTCTTATGCACATCCCGGAA+AGG | 0.591436 | 3_3:-81092749 | None:intergenic |
| GTTAGGGTTTGGGAATGGAA+AGG | 0.592204 | 3_3:-81085473 | None:intergenic |
| AGGTGACTGTTGCTGATGCA+AGG | 0.592702 | 3_3:+81092220 | Msa0477020:CDS |
| TATGTCTGGCCAGGTCTATG+AGG | 0.594144 | 3_3:+81086410 | Msa0477020:CDS |
| ACAAGTTCAGCCTCATCAGA+TGG | 0.597230 | 3_3:-81091797 | None:intergenic |
| AAAGACGAAGCTATACATGA+TGG | 0.597974 | 3_3:+81091896 | Msa0477020:CDS |
| ACTGAATCCTAGTATGGCTG+TGG | 0.598944 | 3_3:+81085754 | Msa0477020:CDS |
| GAATCCTAGTATGGCTGTGG+TGG | 0.600379 | 3_3:+81085757 | Msa0477020:CDS |
| TATTACATAGGCCCAGTGGA+TGG | 0.600676 | 3_3:+81089274 | Msa0477020:CDS |
| ATTTGTTAGACAATGCTGGT+CGG | 0.603925 | 3_3:+81090475 | Msa0477020:CDS |
| TACAAGGTGATTCTGGAAAG+GGG | 0.607701 | 3_3:-81085527 | None:intergenic |
| TATCAAATGCTCCACACTGG+AGG | 0.611958 | 3_3:-81091733 | None:intergenic |
| TTCCCAACCAAGGCACCCCT+AGG | 0.612053 | 3_3:-81091875 | None:intergenic |
| CTCAGAAGCTCGATGTCAAG+GGG | 0.612883 | 3_3:-81092252 | None:intergenic |
| GATGTCCAGTCAACCCTGCT+TGG | 0.614015 | 3_3:-81092635 | None:intergenic |
| TCCAGTTGACAAGATATTGT+GGG | 0.614631 | 3_3:+81085814 | Msa0477020:CDS |
| TGAGGCTGAACTTGTGCACA+TGG | 0.615311 | 3_3:+81091805 | Msa0477020:CDS |
| GTTACAAAACGTATTGGCAG+AGG | 0.616921 | 3_3:+81089163 | Msa0477020:CDS |
| TCTTCAAATAGAGTAGAACC+TGG | 0.617072 | 3_3:-81089241 | None:intergenic |
| TCAAATGCTCCACACTGGAG+GGG | 0.618009 | 3_3:-81091731 | None:intergenic |
| CTTACCAAATATGATTGTCA+TGG | 0.622425 | 3_3:+81091772 | Msa0477020:CDS |
| TCAGATGGTCCCCTCCAGTG+TGG | 0.622752 | 3_3:+81091722 | Msa0477020:CDS |
| TGAGAAAGACAAAGACATTG+TGG | 0.627386 | 3_3:+81090545 | Msa0477020:CDS |
| AGCTTCGTCTTTCCCAACCA+AGG | 0.630651 | 3_3:-81091885 | None:intergenic |
| TTTACAGAGAGCCTATGACC+AGG | 0.633765 | 3_3:+81090731 | Msa0477020:CDS |
| CACATAAGATACTTACAGGA+CGG | 0.634565 | 3_3:+81085987 | Msa0477020:CDS |
| TTATATCAAATGCTCCACAC+TGG | 0.640253 | 3_3:-81091736 | None:intergenic |
| GCCCAGCAAACTCAATGCTG+TGG | 0.647181 | 3_3:-81092667 | None:intergenic |
| AAAGAGTGTCAAATAGAAAG+GGG | 0.648956 | 3_3:+81092893 | Msa0477020:three_prime_UTR |
| GACAAGATATTGTGGGATGT+CGG | 0.651340 | 3_3:+81085821 | Msa0477020:CDS |
| GTTTGCTTTCGGTATCCTAG+GGG | 0.655988 | 3_3:+81091860 | Msa0477020:CDS |
| TCAAATAGAGTAGAACCTGG+TGG | 0.656357 | 3_3:-81089238 | None:intergenic |
| ACTGTGTCAAGAATGGGTGT+TGG | 0.665774 | 3_3:-81085626 | None:intergenic |
| AAAGTTGATGAATATGCTCG+TGG | 0.672546 | 3_3:+81089205 | Msa0477020:CDS |
| TGTCATGGCACCATCTGATG+AGG | 0.674548 | 3_3:+81091787 | Msa0477020:CDS |
| ATAACTGACAAGCAGCAGGA+TGG | 0.691219 | 3_3:+81089421 | Msa0477020:CDS |
| GTTGTATTACATAGGCCCAG+TGG | 0.704282 | 3_3:+81089270 | Msa0477020:CDS |
| ACTAGATAGAGCATTGACAG+AGG | 0.707471 | 3_3:-81086529 | None:intergenic |
| CATGATGTATTGCAACTGTG+AGG | 0.764353 | 3_3:-81085781 | None:intergenic |
| GGCTGAACTTGTGCACATGG+TGG | 0.765179 | 3_3:+81091808 | Msa0477020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAAATAAATAAAT+CGG | + | chr3_3:81088899-81088918 | Msa0477020:intron | 0.0% |
| !! | TAATATAATGTTATGAAATA+AGG | - | chr3_3:81086152-81086171 | None:intergenic | 10.0% |
| !!! | AAAGTAATGTATATTTTTAA+AGG | - | chr3_3:81087095-81087114 | None:intergenic | 10.0% |
| !!! | TTTTCTATATATACTATATT+AGG | - | chr3_3:81088591-81088610 | None:intergenic | 10.0% |
| !! | ATATAATTAATATTTCCTAT+AGG | + | chr3_3:81090300-81090319 | Msa0477020:intron | 10.0% |
| !!! | ACAATTTAATTTTATAAAGT+GGG | - | chr3_3:81090893-81090912 | None:intergenic | 10.0% |
| !!! | AACAATTTAATTTTATAAAG+TGG | - | chr3_3:81090894-81090913 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTTAAAGAT+TGG | + | chr3_3:81090986-81091005 | Msa0477020:intron | 10.0% |
| !! | AATAAAAATATAAAAACATG+AGG | - | chr3_3:81091290-81091309 | None:intergenic | 10.0% |
| !!! | ATAACATTATATTAGTTTCT+TGG | + | chr3_3:81086158-81086177 | Msa0477020:intron | 15.0% |
| !!! | TCATTTTGAAACAATTTTTT+TGG | - | chr3_3:81086849-81086868 | None:intergenic | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr3_3:81086951-81086970 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | - | chr3_3:81086975-81086994 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr3_3:81086974-81086993 | Msa0477020:intron | 15.0% |
| !! | AATTGAATTAAAATTTGAGA+AGG | + | chr3_3:81087612-81087631 | Msa0477020:intron | 15.0% |
| !! | TATAAATGTCAATTCAATTT+CGG | - | chr3_3:81088195-81088214 | None:intergenic | 15.0% |
| !! | ACTATGAAATATATATGAAA+CGG | + | chr3_3:81088336-81088355 | Msa0477020:intron | 15.0% |
| !!! | TTATTTTGAATGATAAAACA+TGG | - | chr3_3:81089053-81089072 | None:intergenic | 15.0% |
| !!! | ATTTTGTTACATGTTTAAAA+TGG | + | chr3_3:81089599-81089618 | Msa0477020:intron | 15.0% |
| !!! | TAAATGGTTTTACTAAAATT+TGG | - | chr3_3:81090125-81090144 | None:intergenic | 15.0% |
| !!! | TTCAAATTTTCAAAATAATG+AGG | - | chr3_3:81090385-81090404 | None:intergenic | 15.0% |
| !!! | AATTTAATTTTATAAAGTGG+GGG | - | chr3_3:81090891-81090910 | None:intergenic | 15.0% |
| !!! | CAATTTAATTTTATAAAGTG+GGG | - | chr3_3:81090892-81090911 | None:intergenic | 15.0% |
| !!! | TCTTTTGCTAAAAAAAAAAT+AGG | + | chr3_3:81090927-81090946 | Msa0477020:intron | 15.0% |
| !! | GAACTAAAAAAATTTATTAG+AGG | - | chr3_3:81091336-81091355 | None:intergenic | 15.0% |
| !! | AAGACAATAAGAAAAAAGAA+TGG | + | chr3_3:81086022-81086041 | Msa0477020:CDS | 20.0% |
| !! | TGAACTGATGAAATTATTAT+AGG | + | chr3_3:81086269-81086288 | Msa0477020:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | - | chr3_3:81086888-81086907 | None:intergenic | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | + | chr3_3:81086965-81086984 | Msa0477020:intron | 20.0% |
| !! | AAATGCAATGATTAAAAGAA+TGG | - | chr3_3:81087008-81087027 | None:intergenic | 20.0% |
| !! | GGTTAAAGAAATAAAAAGAA+GGG | - | chr3_3:81087203-81087222 | None:intergenic | 20.0% |
| !! | AGGTTAAAGAAATAAAAAGA+AGG | - | chr3_3:81087204-81087223 | None:intergenic | 20.0% |
| !! | CAATTTCAAAAATTGATAAG+AGG | + | chr3_3:81087564-81087583 | Msa0477020:intron | 20.0% |
| !! | GTAAAAGGAATAAAAAATAG+AGG | + | chr3_3:81087812-81087831 | Msa0477020:intron | 20.0% |
| !! | ATATATATTTCATAGTGGTT+TGG | - | chr3_3:81088332-81088351 | None:intergenic | 20.0% |
| !! | GTTTCATATATATTTCATAG+TGG | - | chr3_3:81088337-81088356 | None:intergenic | 20.0% |
| !! | AAATAGAAAAAATCATTACC+TGG | + | chr3_3:81088366-81088385 | Msa0477020:intron | 20.0% |
| !! | ATTCAAAAAAACATGTTTGT+GGG | - | chr3_3:81088442-81088461 | None:intergenic | 20.0% |
| !! | TATTCAAAAAAACATGTTTG+TGG | - | chr3_3:81088443-81088462 | None:intergenic | 20.0% |
| !! | AGAAATATGTAAAAAGAAGA+TGG | + | chr3_3:81088482-81088501 | Msa0477020:intron | 20.0% |
| !! | ATAGTATATATAGAAAACCT+AGG | + | chr3_3:81088594-81088613 | Msa0477020:intron | 20.0% |
| !! | TAGTATATATAGAAAACCTA+GGG | + | chr3_3:81088595-81088614 | Msa0477020:intron | 20.0% |
| !! | AAATTCACTGTATCTATTAA+AGG | + | chr3_3:81088719-81088738 | Msa0477020:intron | 20.0% |
| !! | TAATAATGATGATCCTTATT+TGG | + | chr3_3:81089090-81089109 | Msa0477020:intron | 20.0% |
| !! | ATAAAATGAGATTACAGTTT+AGG | + | chr3_3:81089531-81089550 | Msa0477020:intron | 20.0% |
| !!! | ATAGAGGAAAATGAATATTT+TGG | - | chr3_3:81089724-81089743 | None:intergenic | 20.0% |
| !! | ATAAACATTACACAGTAAAA+AGG | + | chr3_3:81089768-81089787 | Msa0477020:intron | 20.0% |
| !! | GTATCATGATTATTATTGTT+TGG | - | chr3_3:81089842-81089861 | None:intergenic | 20.0% |
| !! | TAATCAATAAATGAAGTGAT+TGG | - | chr3_3:81089988-81090007 | None:intergenic | 20.0% |
| !!! | AAAATTTGGTGTTTTGATAA+TGG | - | chr3_3:81090111-81090130 | None:intergenic | 20.0% |
| !! | AACAGTTTATTTATACAAGA+GGG | - | chr3_3:81090955-81090974 | None:intergenic | 20.0% |
| !! | TAACAGTTTATTTATACAAG+AGG | - | chr3_3:81090956-81090975 | None:intergenic | 20.0% |
| !! | AATCTCAGTAAATTAAATGA+GGG | - | chr3_3:81091034-81091053 | None:intergenic | 20.0% |
| !! | AAATCTCAGTAAATTAAATG+AGG | - | chr3_3:81091035-81091054 | None:intergenic | 20.0% |
| !!! | TCCTTTTTTAGTTAAAATGA+AGG | + | chr3_3:81091106-81091125 | Msa0477020:intron | 20.0% |
| !!! | TCCTTCATTTTAACTAAAAA+AGG | - | chr3_3:81091110-81091129 | None:intergenic | 20.0% |
| !! | CTAAAAAAATTTATTAGAGG+AGG | - | chr3_3:81091333-81091352 | None:intergenic | 20.0% |
| !! | TAAAAAAATCCTCCAAATTT+GGG | - | chr3_3:81091360-81091379 | None:intergenic | 20.0% |
| !! | GATCGCAAATTAAAATAAAA+CGG | - | chr3_3:81091516-81091535 | None:intergenic | 20.0% |
| !! | TAATTTATTCATACACAGAT+TGG | + | chr3_3:81092090-81092109 | Msa0477020:intron | 20.0% |
| !! | AACTAATTACCTTAATTCTT+CGG | - | chr3_3:81092383-81092402 | None:intergenic | 20.0% |
| !! | TTTATGCTTTCAAGAATATT+TGG | + | chr3_3:81092427-81092446 | Msa0477020:intron | 20.0% |
| !! | TTATGCTTTCAAGAATATTT+GGG | + | chr3_3:81092428-81092447 | Msa0477020:intron | 20.0% |
| !!! | AAATTTTGTTTTTCTTGTGT+TGG | + | chr3_3:81092506-81092525 | Msa0477020:intron | 20.0% |
| !!! | TCTTTTCTGTACAATTAAAA+TGG | - | chr3_3:81092878-81092897 | None:intergenic | 20.0% |
| !! | ATACTAACATAGGTATAATA+TGG | + | chr3_3:81093014-81093033 | Msa0477020:three_prime_UTR | 20.0% |
| !!! | TGCAATTTTCTGTTAATTAA+AGG | - | chr3_3:81093099-81093118 | None:intergenic | 20.0% |
| !! | TTTGGTTCAAAAAAAACCAA+AGG | - | chr3_3:81085276-81085295 | None:intergenic | 25.0% |
| ! | TTTGAAGATTTGAGTAATGA+TGG | + | chr3_3:81085418-81085437 | Msa0477020:exon | 25.0% |
| ! | TTGAAGATTTGAGTAATGAT+GGG | + | chr3_3:81085419-81085438 | Msa0477020:exon | 25.0% |
| !! | TGATATTGATGATTTCTACT+GGG | + | chr3_3:81085595-81085614 | Msa0477020:CDS | 25.0% |
| ! | AAATAGAAGACAACTCTAAA+CGG | - | chr3_3:81085715-81085734 | None:intergenic | 25.0% |
| ! | AATATTACTGAATCCTAGTA+TGG | + | chr3_3:81085748-81085767 | Msa0477020:CDS | 25.0% |
| ! | TTTCATCAGTTCATTTAAGA+AGG | - | chr3_3:81086262-81086281 | None:intergenic | 25.0% |
| !!! | TATGGAGTATATTTTGTTTC+AGG | + | chr3_3:81086318-81086337 | Msa0477020:intron | 25.0% |
| !!! | AGTATATTTTGTTTCAGGAA+TGG | + | chr3_3:81086323-81086342 | Msa0477020:intron | 25.0% |
| !! | TCATTTAAAGTTGAATGATG+TGG | - | chr3_3:81086716-81086735 | None:intergenic | 25.0% |
| !!! | CTTTCCATTTTGATTTAATG+TGG | + | chr3_3:81087111-81087130 | Msa0477020:intron | 25.0% |
| ! | TTCTCCACATTAAATCAAAA+TGG | - | chr3_3:81087118-81087137 | None:intergenic | 25.0% |
| ! | AAAAAAAAAATGGAGGAAGA+TGG | - | chr3_3:81087288-81087307 | None:intergenic | 25.0% |
| ! | AATTGAAGCAAATCAGAAAT+GGG | - | chr3_3:81087385-81087404 | None:intergenic | 25.0% |
| ! | AAATTGAAGCAAATCAGAAA+TGG | - | chr3_3:81087386-81087405 | None:intergenic | 25.0% |
| !! | ATTTTTCATGGATTCAATGA+AGG | - | chr3_3:81087455-81087474 | None:intergenic | 25.0% |
| ! | AACATGTATATTGGAATCAT+GGG | - | chr3_3:81087499-81087518 | None:intergenic | 25.0% |
| ! | AAACATGTATATTGGAATCA+TGG | - | chr3_3:81087500-81087519 | None:intergenic | 25.0% |
| ! | ATGAAAGAAAAAGATGAATC+TGG | - | chr3_3:81087540-81087559 | None:intergenic | 25.0% |
| ! | TGAATTAAAATTTGAGAAGG+AGG | + | chr3_3:81087615-81087634 | Msa0477020:intron | 25.0% |
| ! | GAATTAAAATTTGAGAAGGA+GGG | + | chr3_3:81087616-81087635 | Msa0477020:intron | 25.0% |
| ! | AATAAAAAATAGAGGTGATG+TGG | + | chr3_3:81087820-81087839 | Msa0477020:intron | 25.0% |
| !! | ACGTTAACTACAATTTCTTT+TGG | - | chr3_3:81088240-81088259 | None:intergenic | 25.0% |
| !! | CGGATCTTGATTAAATTTTT+GGG | + | chr3_3:81088302-81088321 | Msa0477020:intron | 25.0% |
| !! | GGATCTTGATTAAATTTTTG+GGG | + | chr3_3:81088303-81088322 | Msa0477020:intron | 25.0% |
| !!! | GATCTTGATTAAATTTTTGG+GGG | + | chr3_3:81088304-81088323 | Msa0477020:intron | 25.0% |
| ! | AATATATATGAAACGGTTTC+AGG | + | chr3_3:81088343-81088362 | Msa0477020:intron | 25.0% |
| ! | TTCAAAAAAACATGTTTGTG+GGG | - | chr3_3:81088441-81088460 | None:intergenic | 25.0% |
| ! | AGTATATATAGAAAACCTAG+GGG | + | chr3_3:81088596-81088615 | Msa0477020:intron | 25.0% |
| !! | TTTAATTGATAGTTGATCAG+TGG | - | chr3_3:81088657-81088676 | None:intergenic | 25.0% |
| ! | TGTTATAACTGATGAAAATC+AGG | + | chr3_3:81089372-81089391 | Msa0477020:CDS | 25.0% |
| !!! | TACTGATTTAGTTAAAAACG+AGG | + | chr3_3:81089558-81089577 | Msa0477020:intron | 25.0% |
| ! | TAGACAATACAAACAATGTA+AGG | - | chr3_3:81089812-81089831 | None:intergenic | 25.0% |
| ! | TCATGATTATTATTGTTTGG+TGG | - | chr3_3:81089839-81089858 | None:intergenic | 25.0% |
| ! | GAGTAAACTATATGGATAAA+TGG | + | chr3_3:81090082-81090101 | Msa0477020:intron | 25.0% |
| ! | TTTAGTAAAACCATTTACAC+TGG | + | chr3_3:81090128-81090147 | Msa0477020:intron | 25.0% |
| ! | TTAGTAAAACCATTTACACT+GGG | + | chr3_3:81090129-81090148 | Msa0477020:intron | 25.0% |
| ! | TAAAAAATACCCAGTGTAAA+TGG | - | chr3_3:81090141-81090160 | None:intergenic | 25.0% |
| !!! | TTTACACTGGGTATTTTTTA+AGG | + | chr3_3:81090141-81090160 | Msa0477020:intron | 25.0% |
| !! | TTTTCTCTCAATGTTTTCTT+AGG | + | chr3_3:81090164-81090183 | Msa0477020:intron | 25.0% |
| !! | GTATGTTAACTTTTCAGAAT+TGG | + | chr3_3:81090443-81090462 | Msa0477020:intron | 25.0% |
| ! | TTATGGAAAAATTTCCAGAT+AGG | + | chr3_3:81090610-81090629 | Msa0477020:CDS | 25.0% |
| ! | ATCTCAGTAAATTAAATGAG+GGG | - | chr3_3:81091033-81091052 | None:intergenic | 25.0% |
| !!! | TCCCTTTTTAAGTTTGTTTT+AGG | + | chr3_3:81091062-81091081 | Msa0477020:intron | 25.0% |
| ! | GCCTAAAACAAACTTAAAAA+GGG | - | chr3_3:81091066-81091085 | None:intergenic | 25.0% |
| !! | TTTTAGGCCTAGATATATAT+CGG | + | chr3_3:81091078-81091097 | Msa0477020:intron | 25.0% |
| ! | ATTGTACTTTATGAACCTTA+AGG | + | chr3_3:81091183-81091202 | Msa0477020:intron | 25.0% |
| ! | AAAAAAATCCTCCAAATTTG+GGG | - | chr3_3:81091359-81091378 | None:intergenic | 25.0% |
| ! | GTAAAAAAATCCTCCAAATT+TGG | - | chr3_3:81091361-81091380 | None:intergenic | 25.0% |
| ! | ACTTTCATGAGAAAGTAATT+AGG | + | chr3_3:81091472-81091491 | Msa0477020:intron | 25.0% |
| ! | TAACACCTATTACTTTGTAA+AGG | + | chr3_3:81091974-81091993 | Msa0477020:intron | 25.0% |
| ! | AACACCTATTACTTTGTAAA+GGG | + | chr3_3:81091975-81091994 | Msa0477020:intron | 25.0% |
| ! | TTTACCCTTTACAAAGTAAT+AGG | - | chr3_3:81091982-81092001 | None:intergenic | 25.0% |
| ! | TACGATACTATGACAATATT+GGG | - | chr3_3:81092042-81092061 | None:intergenic | 25.0% |
| ! | ATACGATACTATGACAATAT+TGG | - | chr3_3:81092043-81092062 | None:intergenic | 25.0% |
| !! | TATTCTTGAAAGCATAAAAC+AGG | - | chr3_3:81092425-81092444 | None:intergenic | 25.0% |
| !!! | GGGTTTTATGAATGTATTAT+TGG | + | chr3_3:81092448-81092467 | Msa0477020:intron | 25.0% |
| !!! | AAAAGAGTGTCAAATAGAAA+GGG | + | chr3_3:81092892-81092911 | Msa0477020:three_prime_UTR | 25.0% |
| ! | CGTTTTCTAACAATTCGTAT+TGG | + | chr3_3:81085379-81085398 | Msa0477020:five_prime_UTR | 30.0% |
| TCTAGAAGAAGAAGAATACA+AGG | - | chr3_3:81085546-81085565 | None:intergenic | 30.0% | |
| CAGTAGAAATCATCAATATC+AGG | - | chr3_3:81085596-81085615 | None:intergenic | 30.0% | |
| ! | CTGATATTGATGATTTCTAC+TGG | + | chr3_3:81085594-81085613 | Msa0477020:CDS | 30.0% |
| ! | TTTTGAACTGTGTCAAGAAT+GGG | - | chr3_3:81085635-81085654 | None:intergenic | 30.0% |
| ! | AGAGTTGTCTTCTATTTTGT+CGG | + | chr3_3:81085718-81085737 | Msa0477020:CDS | 30.0% |
| ! | CAAAATTTGAAATGAGAAGC+AGG | - | chr3_3:81085864-81085883 | None:intergenic | 30.0% |
| CAGACAAATAACAAACAAGT+TGG | - | chr3_3:81085957-81085976 | None:intergenic | 30.0% | |
| TATGCACATAAGATACTTAC+AGG | + | chr3_3:81085983-81086002 | Msa0477020:CDS | 30.0% | |
| AGAAAAAAGAATGGTCTTTC+TGG | + | chr3_3:81086031-81086050 | Msa0477020:CDS | 30.0% | |
| CAAATGTTCTCAAAGTCATA+TGG | + | chr3_3:81086300-81086319 | Msa0477020:intron | 30.0% | |
| AAACTTTCGGAAAGATTTAC+TGG | - | chr3_3:81086574-81086593 | None:intergenic | 30.0% | |
| !! | AAGCAACACTCATTTTGAAA+CGG | - | chr3_3:81086823-81086842 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr3_3:81087050-81087069 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr3_3:81087051-81087070 | Msa0477020:intron | 30.0% |
| ATTTAATGTGGAGAATTGCT+AGG | + | chr3_3:81087123-81087142 | Msa0477020:intron | 30.0% | |
| TTTAATGTGGAGAATTGCTA+GGG | + | chr3_3:81087124-81087143 | Msa0477020:intron | 30.0% | |
| ! | AGTGTGTTAAAAGTGTGTTA+GGG | - | chr3_3:81087157-81087176 | None:intergenic | 30.0% |
| !!! | ATGATGTGGCTAGTTTTTAT+TGG | - | chr3_3:81087180-81087199 | None:intergenic | 30.0% |
| AATAAAAAGAAGGGATGATG+TGG | - | chr3_3:81087194-81087213 | None:intergenic | 30.0% | |
| ! | TTATTTCTTTAACCTGCAAC+CGG | + | chr3_3:81087209-81087228 | Msa0477020:intron | 30.0% |
| !! | AAGTACTTTGTTGTTTGTAC+CGG | - | chr3_3:81087231-81087250 | None:intergenic | 30.0% |
| ATCGGCAAAAAAAAAAATGG+AGG | - | chr3_3:81087295-81087314 | None:intergenic | 30.0% | |
| !!! | TCCATTTTTTTTTTTGCCGA+TGG | + | chr3_3:81087294-81087313 | Msa0477020:intron | 30.0% |
| TTCTCCTCCTTCAAAAATAA+CGG | + | chr3_3:81087343-81087362 | Msa0477020:intron | 30.0% | |
| !! | TTCTGATTTGCTTCAATTTG+TGG | + | chr3_3:81087387-81087406 | Msa0477020:intron | 30.0% |
| !! | GAGCATTGAAACATGTATAT+TGG | - | chr3_3:81087508-81087527 | None:intergenic | 30.0% |
| ! | TTATTCCTTTTACCTGTTAC+AGG | - | chr3_3:81087805-81087824 | None:intergenic | 30.0% |
| !! | GTGATGTGGCTAATTTTAAT+TGG | + | chr3_3:81087834-81087853 | Msa0477020:intron | 30.0% |
| CACATTAAAGAGAAATGCTA+GGG | - | chr3_3:81087892-81087911 | None:intergenic | 30.0% | |
| TCACATTAAAGAGAAATGCT+AGG | - | chr3_3:81087893-81087912 | None:intergenic | 30.0% | |
| !! | AACCAAGCATTTCTGTTTTT+GGG | - | chr3_3:81087975-81087994 | None:intergenic | 30.0% |
| GTAGTTAACGTACAATTGAA+CGG | + | chr3_3:81088249-81088268 | Msa0477020:intron | 30.0% | |
| TAGTTAACGTACAATTGAAC+GGG | + | chr3_3:81088250-81088269 | Msa0477020:intron | 30.0% | |
| GTTAAATGTATCAACTACAG+TGG | + | chr3_3:81088279-81088298 | Msa0477020:intron | 30.0% | |
| ! | GCGGATCTTGATTAAATTTT+TGG | + | chr3_3:81088301-81088320 | Msa0477020:intron | 30.0% |
| TTCAAACAAGTTAAACCACT+AGG | - | chr3_3:81088392-81088411 | None:intergenic | 30.0% | |
| TCTATTAAAGGAATGAGAAG+AGG | + | chr3_3:81088731-81088750 | Msa0477020:intron | 30.0% | |
| !!! | AAGGAGGGGAAATTTTTTAT+TGG | + | chr3_3:81088778-81088797 | Msa0477020:intron | 30.0% |
| ! | TTCATGGGTTGTATATCTTA+AGG | + | chr3_3:81089007-81089026 | Msa0477020:intron | 30.0% |
| ! | TCATGGGTTGTATATCTTAA+GGG | + | chr3_3:81089008-81089027 | Msa0477020:intron | 30.0% |
| CAACAAGAAATAGCACATAA+TGG | - | chr3_3:81089491-81089510 | None:intergenic | 30.0% | |
| !! | TGCTATTTCTTGTTGTAGAA+TGG | + | chr3_3:81089496-81089515 | Msa0477020:intron | 30.0% |
| TTTAGTTAAAAACGAGGAAC+TGG | + | chr3_3:81089564-81089583 | Msa0477020:intron | 30.0% | |
| ATAGAACAAATGTAGAAGTG+TGG | + | chr3_3:81089629-81089648 | Msa0477020:intron | 30.0% | |
| AAACATTGCAACACATATAG+AGG | - | chr3_3:81089740-81089759 | None:intergenic | 30.0% | |
| ATGAAACAAATTCAACAAGG+GGG | - | chr3_3:81089941-81089960 | None:intergenic | 30.0% | |
| CATGAAACAAATTCAACAAG+GGG | - | chr3_3:81089942-81089961 | None:intergenic | 30.0% | |
| GCATGAAACAAATTCAACAA+GGG | - | chr3_3:81089943-81089962 | None:intergenic | 30.0% | |
| AGCATGAAACAAATTCAACA+AGG | - | chr3_3:81089944-81089963 | None:intergenic | 30.0% | |
| !!! | GATTGGTTTCATTTTCTGAA+AGG | - | chr3_3:81089971-81089990 | None:intergenic | 30.0% |
| AGAGTTAGAGTTTATCTGTA+AGG | - | chr3_3:81090011-81090030 | None:intergenic | 30.0% | |
| GCTTGGGAAGAATATTTAAA+TGG | - | chr3_3:81090201-81090220 | None:intergenic | 30.0% | |
| AAACCAACACTGCATTTATT+TGG | + | chr3_3:81090255-81090274 | Msa0477020:intron | 30.0% | |
| GAAACTAAGCTATAATTTCC+TGG | - | chr3_3:81090347-81090366 | None:intergenic | 30.0% | |
| TTTCCCAATCACTTTCTAAT+TGG | + | chr3_3:81090416-81090435 | Msa0477020:intron | 30.0% | |
| CAACCAATTAGAAAGTGATT+GGG | - | chr3_3:81090422-81090441 | None:intergenic | 30.0% | |
| ACAACCAATTAGAAAGTGAT+TGG | - | chr3_3:81090423-81090442 | None:intergenic | 30.0% | |
| TCCATAAACAGTTTAAGTGA+CGG | - | chr3_3:81090597-81090616 | None:intergenic | 30.0% | |
| ! | TCCAGATAGGATTTTTAATG+TGG | + | chr3_3:81090623-81090642 | Msa0477020:CDS | 30.0% |
| ! | CCAGATAGGATTTTTAATGT+GGG | + | chr3_3:81090624-81090643 | Msa0477020:CDS | 30.0% |
| ! | GAAGAAGGTATAATGCAAAA+TGG | - | chr3_3:81090708-81090727 | None:intergenic | 30.0% |
| TCATGATAACCACTATATGT+AGG | + | chr3_3:81090779-81090798 | Msa0477020:intron | 30.0% | |
| GGTCTTTACTAGGAAATAAA+AGG | - | chr3_3:81091012-81091031 | None:intergenic | 30.0% | |
| GGCCTAAAACAAACTTAAAA+AGG | - | chr3_3:81091067-81091086 | None:intergenic | 30.0% | |
| TTTAGGCCTAGATATATATC+GGG | + | chr3_3:81091079-81091098 | Msa0477020:intron | 30.0% | |
| ! | TATTAGAGGAGGATTTTAGA+GGG | - | chr3_3:81091322-81091341 | None:intergenic | 30.0% |
| ! | TTATTAGAGGAGGATTTTAG+AGG | - | chr3_3:81091323-81091342 | None:intergenic | 30.0% |
| !!! | TTTTTTAGTTCCCCCAAATT+TGG | + | chr3_3:81091345-81091364 | Msa0477020:intron | 30.0% |
| AAAAAATCCTCCAAATTTGG+GGG | - | chr3_3:81091358-81091377 | None:intergenic | 30.0% | |
| AACTCTTGCACATTACATAA+TGG | + | chr3_3:81091587-81091606 | Msa0477020:intron | 30.0% | |
| CTTACCAAATATGATTGTCA+TGG | + | chr3_3:81091772-81091791 | Msa0477020:CDS | 30.0% | |
| ACGATACTATGACAATATTG+GGG | - | chr3_3:81092041-81092060 | None:intergenic | 30.0% | |
| TATTCATACACAGATTGGAA+AGG | + | chr3_3:81092095-81092114 | Msa0477020:intron | 30.0% | |
| ATTCATACACAGATTGGAAA+GGG | + | chr3_3:81092096-81092115 | Msa0477020:intron | 30.0% | |
| CAACGGTAATTAGAAAAGAA+TGG | - | chr3_3:81092293-81092312 | None:intergenic | 30.0% | |
| ! | TTCTTTTCTAATTACCGTTG+AGG | + | chr3_3:81092293-81092312 | Msa0477020:CDS | 30.0% |
| AGCAATAAATTGAGCAACAT+GGG | - | chr3_3:81092343-81092362 | None:intergenic | 30.0% | |
| ! | TAATTAGTTTAAGCGTGAGA+AGG | + | chr3_3:81092394-81092413 | Msa0477020:intron | 30.0% |
| !! | AACAAAATTTAGTCTTGCCT+TGG | - | chr3_3:81092496-81092515 | None:intergenic | 30.0% |
| TAACTGTCTGGTAAAACAAT+TGG | - | chr3_3:81092582-81092601 | None:intergenic | 30.0% | |
| CACAATTCACAAACACATAA+AGG | - | chr3_3:81092712-81092731 | None:intergenic | 30.0% | |
| ! | AATAAAGCCTTTTGCATTCT+TGG | - | chr3_3:81092777-81092796 | None:intergenic | 30.0% |
| !! | AGAATGCAAAAGGCTTTATT+AGG | + | chr3_3:81092777-81092796 | Msa0477020:three_prime_UTR | 30.0% |
| !! | GAAAAGAGTGTCAAATAGAA+AGG | + | chr3_3:81092891-81092910 | Msa0477020:three_prime_UTR | 30.0% |
| !! | AAAGAGTGTCAAATAGAAAG+GGG | + | chr3_3:81092893-81092912 | Msa0477020:three_prime_UTR | 30.0% |
| !!! | AGAATGCAATACTTGTTTTG+AGG | + | chr3_3:81092991-81093010 | Msa0477020:three_prime_UTR | 30.0% |
| !!! | TGTTTTGAGGATACTAACAT+AGG | + | chr3_3:81093004-81093023 | Msa0477020:three_prime_UTR | 30.0% |
| ACAGAAAATTGCAAGTGTTA+AGG | + | chr3_3:81093106-81093125 | Msa0477020:three_prime_UTR | 30.0% | |
| GAAAGAACATTTCCATCGTT+TGG | - | chr3_3:81085239-81085258 | None:intergenic | 35.0% | |
| ACTTTCGTTAACACTGTGTT+TGG | - | chr3_3:81085294-81085313 | None:intergenic | 35.0% | |
| CGAGTGATCAAAACAGATTA+TGG | + | chr3_3:81085325-81085344 | Msa0477020:five_prime_UTR | 35.0% | |
| AATGGAAAGGGATCACAAAT+GGG | - | chr3_3:81085463-81085482 | None:intergenic | 35.0% | |
| ! | ATACAAGGTGATTCTGGAAA+GGG | - | chr3_3:81085531-81085550 | None:intergenic | 35.0% |
| ! | AATACAAGGTGATTCTGGAA+AGG | - | chr3_3:81085532-81085551 | None:intergenic | 35.0% |
| AGAAGAATACAAGGTGATTC+TGG | - | chr3_3:81085537-81085556 | None:intergenic | 35.0% | |
| !! | GTTTTGAACTGTGTCAAGAA+TGG | - | chr3_3:81085636-81085655 | None:intergenic | 35.0% |
| AAAGGTTCTTCAAGCAAAGA+GGG | - | chr3_3:81085658-81085677 | None:intergenic | 35.0% | |
| ! | GAGTTGTCTTCTATTTTGTC+GGG | + | chr3_3:81085719-81085738 | Msa0477020:CDS | 35.0% |
| TCCAGTTGACAAGATATTGT+GGG | + | chr3_3:81085814-81085833 | Msa0477020:CDS | 35.0% | |
| ! | TCAAATTTTGCCCTTTGTAG+TGG | + | chr3_3:81085874-81085893 | Msa0477020:intron | 35.0% |
| GCATAACTTTCCACTACAAA+GGG | - | chr3_3:81085887-81085906 | None:intergenic | 35.0% | |
| TGCATAACTTTCCACTACAA+AGG | - | chr3_3:81085888-81085907 | None:intergenic | 35.0% | |
| CACATAAGATACTTACAGGA+CGG | + | chr3_3:81085987-81086006 | Msa0477020:CDS | 35.0% | |
| ATGTTCCGATCATATGTATG+TGG | + | chr3_3:81086211-81086230 | Msa0477020:intron | 35.0% | |
| TGTTCCGATCATATGTATGT+GGG | + | chr3_3:81086212-81086231 | Msa0477020:intron | 35.0% | |
| TCAACCCACATACATATGAT+CGG | - | chr3_3:81086219-81086238 | None:intergenic | 35.0% | |
| CAGTTGCAAGGGATATTAAA+GGG | + | chr3_3:81086346-81086365 | Msa0477020:CDS | 35.0% | |
| TAGTTGCAGTTATCAGCAAT+TGG | + | chr3_3:81086382-81086401 | Msa0477020:CDS | 35.0% | |
| AGGTTACTTGGACTCAAATT+TGG | + | chr3_3:81086446-81086465 | Msa0477020:CDS | 35.0% | |
| TTACTTGGACTCAAATTTGG+TGG | + | chr3_3:81086449-81086468 | Msa0477020:CDS | 35.0% | |
| !! | CAATTTTTGGGAGTAAAGAG+TGG | - | chr3_3:81086494-81086513 | None:intergenic | 35.0% |
| CTCTTTACTCCCAAAAATTG+AGG | + | chr3_3:81086494-81086513 | Msa0477020:CDS | 35.0% | |
| TTTACTCCCAAAAATTGAGG+AGG | + | chr3_3:81086497-81086516 | Msa0477020:CDS | 35.0% | |
| TTACTCCCAAAAATTGAGGA+GGG | + | chr3_3:81086498-81086517 | Msa0477020:CDS | 35.0% | |
| TTCGGAAAGATTTACTGGAT+TGG | - | chr3_3:81086569-81086588 | None:intergenic | 35.0% | |
| TAGCAGCTTCTCTAAACTTT+CGG | - | chr3_3:81086587-81086606 | None:intergenic | 35.0% | |
| AAAGTTTAGAGAAGCTGCTA+AGG | + | chr3_3:81086587-81086606 | Msa0477020:CDS | 35.0% | |
| ! | ATCTTGCATTTTCTCTGCAA+AGG | - | chr3_3:81086631-81086650 | None:intergenic | 35.0% |
| GTTGTTAGCAATAGCATACA+TGG | + | chr3_3:81086676-81086695 | Msa0477020:intron | 35.0% | |
| TGCTAAGTAAGCACTTCAAA+AGG | + | chr3_3:81086761-81086780 | Msa0477020:intron | 35.0% | |
| GCTAAGTAAGCACTTCAAAA+GGG | + | chr3_3:81086762-81086781 | Msa0477020:intron | 35.0% | |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr3_3:81086922-81086941 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr3_3:81086926-81086945 | None:intergenic | 35.0% |
| ! | AACGGAGAGAGTAACTTTTA+AGG | + | chr3_3:81087069-81087088 | Msa0477020:intron | 35.0% |
| ! | GAGTGTGTTAAAAGTGTGTT+AGG | - | chr3_3:81087158-81087177 | None:intergenic | 35.0% |
| GCCATCGGCAAAAAAAAAAA+TGG | - | chr3_3:81087298-81087317 | None:intergenic | 35.0% | |
| !!! | TATGGTGCCGTTATTTTTGA+AGG | - | chr3_3:81087353-81087372 | None:intergenic | 35.0% |
| TTCTTGAAAAGGGATGTACA+GGG | - | chr3_3:81087415-81087434 | None:intergenic | 35.0% | |
| CAATGAAGGAAATATCAGCA+CGG | - | chr3_3:81087441-81087460 | None:intergenic | 35.0% | |
| AAATGTCACCATCCTCAATT+TGG | + | chr3_3:81087471-81087490 | Msa0477020:intron | 35.0% | |
| AAAAGATGAATCTGGTGTGA+AGG | - | chr3_3:81087532-81087551 | None:intergenic | 35.0% | |
| ATTGAAATTGAGAGGGAGAA+TGG | + | chr3_3:81087640-81087659 | Msa0477020:intron | 35.0% | |
| TTGAAATTGAGAGGGAGAAT+GGG | + | chr3_3:81087641-81087660 | Msa0477020:intron | 35.0% | |
| TAGAGATTGTCACAGTAGAA+AGG | + | chr3_3:81087725-81087744 | Msa0477020:intron | 35.0% | |
| AGAGATTGTCACAGTAGAAA+GGG | + | chr3_3:81087726-81087745 | Msa0477020:intron | 35.0% | |
| !! | TGTGAAAAGAGAGTGTTAGA+GGG | + | chr3_3:81087861-81087880 | Msa0477020:intron | 35.0% |
| !!! | ACCAAGCATTTCTGTTTTTG+GGG | - | chr3_3:81087974-81087993 | None:intergenic | 35.0% |
| ! | CAACCAAGCATTTCTGTTTT+TGG | - | chr3_3:81087976-81087995 | None:intergenic | 35.0% |
| TGGTTGTATACAATGAAGCA+TGG | + | chr3_3:81087990-81088009 | Msa0477020:intron | 35.0% | |
| CGTCGTTCATTGAAAAACAT+AGG | + | chr3_3:81088058-81088077 | Msa0477020:intron | 35.0% | |
| AAATGTATCAACTACAGTGG+CGG | + | chr3_3:81088282-81088301 | Msa0477020:intron | 35.0% | |
| !! | TAACTTGTTTGAAAGCAGCA+AGG | + | chr3_3:81088399-81088418 | Msa0477020:intron | 35.0% |
| ! | AACTTGTTTGAAAGCAGCAA+GGG | + | chr3_3:81088400-81088419 | Msa0477020:intron | 35.0% |
| GTAGTCTAAAAATCTCCCAA+TGG | - | chr3_3:81088528-81088547 | None:intergenic | 35.0% | |
| ! | AATTGATAGTTGATCAGTGG+CGG | - | chr3_3:81088654-81088673 | None:intergenic | 35.0% |
| GAATGAGAAGAGGTAACTAA+AGG | + | chr3_3:81088741-81088760 | Msa0477020:intron | 35.0% | |
| GATCATTACGATATAGAGAC+TGG | - | chr3_3:81089119-81089138 | None:intergenic | 35.0% | |
| !! | AAAGTTGATGAATATGCTCG+TGG | + | chr3_3:81089205-81089224 | Msa0477020:CDS | 35.0% |
| TCTTCAAATAGAGTAGAACC+TGG | - | chr3_3:81089244-81089263 | None:intergenic | 35.0% | |
| TCTACTCTATTTGAAGAGCT+TGG | + | chr3_3:81089247-81089266 | Msa0477020:CDS | 35.0% | |
| CTACTCTATTTGAAGAGCTT+GGG | + | chr3_3:81089248-81089267 | Msa0477020:CDS | 35.0% | |
| TCTTCAAGAAGTAGCTTCTT+TGG | + | chr3_3:81089324-81089343 | Msa0477020:CDS | 35.0% | |
| AGTAGCTTCTTTGGATTCAA+TGG | + | chr3_3:81089333-81089352 | Msa0477020:CDS | 35.0% | |
| GTAGCTTCTTTGGATTCAAT+GGG | + | chr3_3:81089334-81089353 | Msa0477020:CDS | 35.0% | |
| GTTATAACATGAACCAAGAC+AGG | - | chr3_3:81089361-81089380 | None:intergenic | 35.0% | |
| ! | ACAAATGTAGAAGTGTGGTA+CGG | + | chr3_3:81089634-81089653 | Msa0477020:intron | 35.0% |
| TATGTGTTGCAATGTTTAGC+AGG | + | chr3_3:81089743-81089762 | Msa0477020:intron | 35.0% | |
| ! | TACTTTTAATGTGCCTGAGT+GGG | + | chr3_3:81089893-81089912 | Msa0477020:intron | 35.0% |
| TGAAACAAATTCAACAAGGG+GGG | - | chr3_3:81089940-81089959 | None:intergenic | 35.0% | |
| TTTACTCCAACCAGTAGATT+GGG | - | chr3_3:81090069-81090088 | None:intergenic | 35.0% | |
| ACTGGTTGGAGTAAACTATA+TGG | + | chr3_3:81090074-81090093 | Msa0477020:intron | 35.0% | |
| AAGCCAAATAAATGCAGTGT+TGG | - | chr3_3:81090261-81090280 | None:intergenic | 35.0% | |
| ATTTCCTGGTTTCAAAAGCA+TGG | - | chr3_3:81090333-81090352 | None:intergenic | 35.0% | |
| !! | TCTGATTTGTTAGACAATGC+TGG | + | chr3_3:81090471-81090490 | Msa0477020:CDS | 35.0% |
| ! | ATTTGTTAGACAATGCTGGT+CGG | + | chr3_3:81090475-81090494 | Msa0477020:CDS | 35.0% |
| AACATATGGTGATTGCTTTG+TGG | + | chr3_3:81090503-81090522 | Msa0477020:CDS | 35.0% | |
| TGAGAAAGACAAAGACATTG+TGG | + | chr3_3:81090545-81090564 | Msa0477020:CDS | 35.0% | |
| CCCACATTAAAAATCCTATC+TGG | - | chr3_3:81090627-81090646 | None:intergenic | 35.0% | |
| !! | TTTGCTTCTGGTTTATCATG+TGG | + | chr3_3:81090672-81090691 | Msa0477020:CDS | 35.0% |
| ATAAGTATGAACCTGGTCAT+AGG | - | chr3_3:81090745-81090764 | None:intergenic | 35.0% | |
| AGCTGAAATAAGTATGAACC+TGG | - | chr3_3:81090752-81090771 | None:intergenic | 35.0% | |
| TGTCTGTTACCTACATATAG+TGG | - | chr3_3:81090791-81090810 | None:intergenic | 35.0% | |
| ! | AGAACATCCTATCTTTTGTC+AGG | + | chr3_3:81090826-81090845 | Msa0477020:intron | 35.0% |
| ! | GAACATCCTATCTTTTGTCA+GGG | + | chr3_3:81090827-81090846 | Msa0477020:intron | 35.0% |
| TAAAGTGGGGGTCTAAAAAA+AGG | - | chr3_3:81090879-81090898 | None:intergenic | 35.0% | |
| TTAAATGAGGGGTCTTTACT+AGG | - | chr3_3:81091022-81091041 | None:intergenic | 35.0% | |
| TGCTTACAATTTGGCAGTTA+AGG | - | chr3_3:81091154-81091173 | None:intergenic | 35.0% | |
| TGCCAAATTGTAAGCAATGA+AGG | + | chr3_3:81091158-81091177 | Msa0477020:intron | 35.0% | |
| GCCAAATTGTAAGCAATGAA+GGG | + | chr3_3:81091159-81091178 | Msa0477020:intron | 35.0% | |
| CCAAATTGTAAGCAATGAAG+GGG | + | chr3_3:81091160-81091179 | Msa0477020:intron | 35.0% | |
| TCAATTCCCATACTTCCTTA+GGG | - | chr3_3:81091436-81091455 | None:intergenic | 35.0% | |
| !! | TTAATTTGCGATCTGTGAGT+TGG | + | chr3_3:81091523-81091542 | Msa0477020:intron | 35.0% |
| ATTCTGTTCTGCATACAAGT+AGG | - | chr3_3:81091563-81091582 | None:intergenic | 35.0% | |
| TTATATCAAATGCTCCACAC+TGG | - | chr3_3:81091739-81091758 | None:intergenic | 35.0% | |
| ! | ATGATCAACCAGTTTGCTTT+CGG | + | chr3_3:81091849-81091868 | Msa0477020:CDS | 35.0% |
| AAAGACGAAGCTATACATGA+TGG | + | chr3_3:81091896-81091915 | Msa0477020:CDS | 35.0% | |
| ! | ACATGATGGAATTCCAATTG+AGG | + | chr3_3:81091910-81091929 | Msa0477020:CDS | 35.0% |
| GTTTATCAAGAAAACAGCGT+TGG | - | chr3_3:81091943-81091962 | None:intergenic | 35.0% | |
| TACTATGACAATATTGGGGA+AGG | - | chr3_3:81092037-81092056 | None:intergenic | 35.0% | |
| TACCACTCCTAAGTTAAAGA+GGG | - | chr3_3:81092069-81092088 | None:intergenic | 35.0% | |
| AAGGGAAGAATTCTTGTTGA+AGG | + | chr3_3:81092114-81092133 | Msa0477020:CDS | 35.0% | |
| AGGTAAAGATGTTGCCTTAT+TGG | + | chr3_3:81092134-81092153 | Msa0477020:CDS | 35.0% | |
| ! | GGTAAAGATGTTGCCTTATT+GGG | + | chr3_3:81092135-81092154 | Msa0477020:CDS | 35.0% |
| CATTGATCCATATCCCAATA+AGG | - | chr3_3:81092151-81092170 | None:intergenic | 35.0% | |
| CTTATTGGGATATGGATCAA+TGG | + | chr3_3:81092149-81092168 | Msa0477020:CDS | 35.0% | |
| AATGGTTCAGAACTGTCTAA+AGG | + | chr3_3:81092167-81092186 | Msa0477020:CDS | 35.0% | |
| CATTCACTTCTTGCAAATCT+TGG | + | chr3_3:81092192-81092211 | Msa0477020:CDS | 35.0% | |
| TTTCTAATTACCGTTGAGGA+AGG | + | chr3_3:81092297-81092316 | Msa0477020:CDS | 35.0% | |
| TTCTAATTACCGTTGAGGAA+GGG | + | chr3_3:81092298-81092317 | Msa0477020:CDS | 35.0% | |
| GAGCAATAAATTGAGCAACA+TGG | - | chr3_3:81092344-81092363 | None:intergenic | 35.0% | |
| GCTCAATTTATTGCTCTTGA+TGG | + | chr3_3:81092348-81092367 | Msa0477020:CDS | 35.0% | |
| GCATGTTCAATATAACTGTC+TGG | - | chr3_3:81092594-81092613 | None:intergenic | 35.0% | |
| AAGAGAACCAAGAATGCAAA+AGG | + | chr3_3:81092767-81092786 | Msa0477020:three_prime_UTR | 35.0% | |
| !! | TTAGTTCTGATTTGCATGTC+TGG | + | chr3_3:81092831-81092850 | Msa0477020:three_prime_UTR | 35.0% |
| TCTGGTGAAAAAAGAGATCA+TGG | + | chr3_3:81092849-81092868 | Msa0477020:three_prime_UTR | 35.0% | |
| CTGGTGAAAAAAGAGATCAT+GGG | + | chr3_3:81092850-81092869 | Msa0477020:three_prime_UTR | 35.0% | |
| !!! | CTTCAACTTATTTTGCTGTG+AGG | + | chr3_3:81093048-81093067 | Msa0477020:three_prime_UTR | 35.0% |
| GGTCAATTTGTCGTCTCATA+CGG | + | chr3_3:81085346-81085365 | Msa0477020:five_prime_UTR | 40.0% | |
| GAATGGAAAGGGATCACAAA+TGG | - | chr3_3:81085464-81085483 | None:intergenic | 40.0% | |
| TTAGGGTTTGGGAATGGAAA+GGG | - | chr3_3:81085475-81085494 | None:intergenic | 40.0% | |
| ! | GATTCTGGAAAGGGGAAATT+GGG | - | chr3_3:81085522-81085541 | None:intergenic | 40.0% |
| ! | TGATTCTGGAAAGGGGAAAT+TGG | - | chr3_3:81085523-81085542 | None:intergenic | 40.0% |
| ! | TACAAGGTGATTCTGGAAAG+GGG | - | chr3_3:81085530-81085549 | None:intergenic | 40.0% |
| GAAAGGTTCTTCAAGCAAAG+AGG | - | chr3_3:81085659-81085678 | None:intergenic | 40.0% | |
| CATGATGTATTGCAACTGTG+AGG | - | chr3_3:81085784-81085803 | None:intergenic | 40.0% | |
| CTCCAGTTGACAAGATATTG+TGG | + | chr3_3:81085813-81085832 | Msa0477020:CDS | 40.0% | |
| TCCCACAATATCTTGTCAAC+TGG | - | chr3_3:81085818-81085837 | None:intergenic | 40.0% | |
| GACAAGATATTGTGGGATGT+CGG | + | chr3_3:81085821-81085840 | Msa0477020:CDS | 40.0% | |
| GAGAGTGAATACGATGCATT+TGG | + | chr3_3:81086070-81086089 | Msa0477020:CDS | 40.0% | |
| AACAGTATATCTGCTGGACT+TGG | + | chr3_3:81086109-81086128 | Msa0477020:CDS | 40.0% | |
| GCAGTTGCAAGGGATATTAA+AGG | + | chr3_3:81086345-81086364 | Msa0477020:CDS | 40.0% | |
| AGCAATTGGACAACTATGTC+TGG | + | chr3_3:81086396-81086415 | Msa0477020:CDS | 40.0% | |
| AATGAGCAATGCAGGTTACT+TGG | + | chr3_3:81086434-81086453 | Msa0477020:CDS | 40.0% | |
| !! | TTTTTGGGAGTAAAGAGTGG+CGG | - | chr3_3:81086491-81086510 | None:intergenic | 40.0% |
| !! | ACTAGATAGAGCATTGACAG+AGG | - | chr3_3:81086532-81086551 | None:intergenic | 40.0% |
| ! | TTGCATTTTCTCTGCAAAGG+AGG | - | chr3_3:81086628-81086647 | None:intergenic | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr3_3:81086923-81086942 | None:intergenic | 40.0% |
| !!! | TTTTTTTTTGCCGATGGCCA+TGG | + | chr3_3:81087300-81087319 | Msa0477020:intron | 40.0% |
| AAATCAGAAATGGGTCCTCT+TGG | - | chr3_3:81087376-81087395 | None:intergenic | 40.0% | |
| TCTTGAAAAGGGATGTACAG+GGG | - | chr3_3:81087414-81087433 | None:intergenic | 40.0% | |
| CTTCTTGAAAAGGGATGTAC+AGG | - | chr3_3:81087416-81087435 | None:intergenic | 40.0% | |
| ! | GAGGATGGTGACATTTTTCA+TGG | - | chr3_3:81087467-81087486 | None:intergenic | 40.0% |
| GAATCATGGGTACCAAATTG+AGG | - | chr3_3:81087486-81087505 | None:intergenic | 40.0% | |
| !! | AGGAGGGTATTGAAATTGAG+AGG | + | chr3_3:81087632-81087651 | Msa0477020:intron | 40.0% |
| !! | GGAGGGTATTGAAATTGAGA+GGG | + | chr3_3:81087633-81087652 | Msa0477020:intron | 40.0% |
| TGAAATTGAGAGGGAGAATG+GGG | + | chr3_3:81087642-81087661 | Msa0477020:intron | 40.0% | |
| AATGGAGATGGAACGATGAA+AGG | + | chr3_3:81087669-81087688 | Msa0477020:intron | 40.0% | |
| TAACTTGAACAGCCTGTAAC+AGG | + | chr3_3:81087790-81087809 | Msa0477020:intron | 40.0% | |
| AACAGCCTGTAACAGGTAAA+AGG | + | chr3_3:81087797-81087816 | Msa0477020:intron | 40.0% | |
| !! | GTGTGAAAAGAGAGTGTTAG+AGG | + | chr3_3:81087860-81087879 | Msa0477020:intron | 40.0% |
| !!! | ATTTCTGTTTTTGGGGTTGG+GGG | - | chr3_3:81087967-81087986 | None:intergenic | 40.0% |
| !!! | CATTTCTGTTTTTGGGGTTG+GGG | - | chr3_3:81087968-81087987 | None:intergenic | 40.0% |
| !!! | GCATTTCTGTTTTTGGGGTT+GGG | - | chr3_3:81087969-81087988 | None:intergenic | 40.0% |
| !!! | AGCATTTCTGTTTTTGGGGT+TGG | - | chr3_3:81087970-81087989 | None:intergenic | 40.0% |
| ACCCCAAAAACAGAAATGCT+TGG | + | chr3_3:81087970-81087989 | Msa0477020:intron | 40.0% | |
| AAAATCATTACCTGGCCTAG+TGG | + | chr3_3:81088374-81088393 | Msa0477020:intron | 40.0% | |
| ACTTGTTTGAAAGCAGCAAG+GGG | + | chr3_3:81088401-81088420 | Msa0477020:intron | 40.0% | |
| GGATCTTAGTATAGACCCAT+GGG | - | chr3_3:81088633-81088652 | None:intergenic | 40.0% | |
| GAGGTAACTAAAGGAGAGAT+CGG | + | chr3_3:81088750-81088769 | Msa0477020:intron | 40.0% | |
| AAAGGAGAGATCGGAAACTA+AGG | + | chr3_3:81088759-81088778 | Msa0477020:intron | 40.0% | |
| !!! | CGGTAGCTATTTTGACGTAT+CGG | + | chr3_3:81088981-81089000 | Msa0477020:intron | 40.0% |
| CATTACGATATAGAGACTGG+AGG | - | chr3_3:81089116-81089135 | None:intergenic | 40.0% | |
| ! | ATACGTTTTGTAACACCCTG+TGG | - | chr3_3:81089157-81089176 | None:intergenic | 40.0% |
| ! | CAGGGTGTTACAAAACGTAT+TGG | + | chr3_3:81089157-81089176 | Msa0477020:intron | 40.0% |
| ! | GTTACAAAACGTATTGGCAG+AGG | + | chr3_3:81089163-81089182 | Msa0477020:CDS | 40.0% |
| TGAATATGCTCGTGGTATGA+TGG | + | chr3_3:81089213-81089232 | Msa0477020:CDS | 40.0% | |
| GAATATGCTCGTGGTATGAT+GGG | + | chr3_3:81089214-81089233 | Msa0477020:CDS | 40.0% | |
| TCAAATAGAGTAGAACCTGG+TGG | - | chr3_3:81089241-81089260 | None:intergenic | 40.0% | |
| ! | GAGCTTGGGTTGTATTACAT+AGG | + | chr3_3:81089262-81089281 | Msa0477020:CDS | 40.0% |
| ATACATAACTGACAAGCAGC+AGG | + | chr3_3:81089417-81089436 | Msa0477020:CDS | 40.0% | |
| ! | GTGCTTAGACTCAACTGTTT+TGG | + | chr3_3:81089868-81089887 | Msa0477020:intron | 40.0% |
| CACTCAGGCACATTAAAAGT+AGG | - | chr3_3:81089894-81089913 | None:intergenic | 40.0% | |
| !! | CTACTTTTAATGTGCCTGAG+TGG | + | chr3_3:81089892-81089911 | Msa0477020:intron | 40.0% |
| GTTTACTCCAACCAGTAGAT+TGG | - | chr3_3:81090070-81090089 | None:intergenic | 40.0% | |
| !! | TGTTGGTTTCAGCTCATATC+AGG | - | chr3_3:81090244-81090263 | None:intergenic | 40.0% |
| AAGCATGGTACTACACCTAT+AGG | - | chr3_3:81090318-81090337 | None:intergenic | 40.0% | |
| !!! | AGTACCATGCTTTTGAAACC+AGG | + | chr3_3:81090326-81090345 | Msa0477020:intron | 40.0% |
| TGATTGCTTTGTGGAGAGTT+TGG | + | chr3_3:81090512-81090531 | Msa0477020:CDS | 40.0% | |
| GTCTTTGTCTTTCTCAGCTT+CGG | - | chr3_3:81090541-81090560 | None:intergenic | 40.0% | |
| GCCGTCACTTAAACTGTTTA+TGG | + | chr3_3:81090593-81090612 | Msa0477020:CDS | 40.0% | |
| GCTCTCTGTAAAAAGGAAGA+AGG | - | chr3_3:81090723-81090742 | None:intergenic | 40.0% | |
| GTCATAGGCTCTCTGTAAAA+AGG | - | chr3_3:81090730-81090749 | None:intergenic | 40.0% | |
| CCCCTTCATTGCTTACAATT+TGG | - | chr3_3:81091163-81091182 | None:intergenic | 40.0% | |
| ATGAACCTTAAGGCTTCGTT+TGG | + | chr3_3:81091193-81091212 | Msa0477020:intron | 40.0% | |
| TGAACCTTAAGGCTTCGTTT+GGG | + | chr3_3:81091194-81091213 | Msa0477020:intron | 40.0% | |
| ! | TTTAGTTCCCCCAAATTTGG+AGG | + | chr3_3:81091348-81091367 | Msa0477020:intron | 40.0% |
| TACTTCCTTAGGGTCTGTTT+GGG | - | chr3_3:81091426-81091445 | None:intergenic | 40.0% | |
| ATACTTCCTTAGGGTCTGTT+TGG | - | chr3_3:81091427-81091446 | None:intergenic | 40.0% | |
| AAACAGACCCTAAGGAAGTA+TGG | + | chr3_3:81091426-81091445 | Msa0477020:intron | 40.0% | |
| ! | AACAGACCCTAAGGAAGTAT+GGG | + | chr3_3:81091427-81091446 | Msa0477020:intron | 40.0% |
| CTCAATTCCCATACTTCCTT+AGG | - | chr3_3:81091437-81091456 | None:intergenic | 40.0% | |
| ! | CTAAGGAAGTATGGGAATTG+AGG | + | chr3_3:81091435-81091454 | Msa0477020:intron | 40.0% |
| GTATGGGAATTGAGGATATC+TGG | + | chr3_3:81091443-81091462 | Msa0477020:intron | 40.0% | |
| CTTGTAATGACAAAACGCAC+TGG | - | chr3_3:81091686-81091705 | None:intergenic | 40.0% | |
| ! | CGTTTTGTCATTACAAGTGC+AGG | + | chr3_3:81091689-81091708 | Msa0477020:CDS | 40.0% |
| TGTCATTACAAGTGCAGGAT+TGG | + | chr3_3:81091694-81091713 | Msa0477020:CDS | 40.0% | |
| ! | ATTACAAGTGCAGGATTGGT+AGG | + | chr3_3:81091698-81091717 | Msa0477020:CDS | 40.0% |
| ! | GGTGCCATGACAATCATATT+TGG | - | chr3_3:81091779-81091798 | None:intergenic | 40.0% |
| ! | AGTTTGCTTTCGGTATCCTA+GGG | + | chr3_3:81091859-81091878 | Msa0477020:CDS | 40.0% |
| CGTTGGTCAATTACCTCAAT+TGG | - | chr3_3:81091926-81091945 | None:intergenic | 40.0% | |
| ! | GTATCTCCCCTCTTTAACTT+AGG | + | chr3_3:81092059-81092078 | Msa0477020:intron | 40.0% |
| ACCACTCCTAAGTTAAAGAG+GGG | - | chr3_3:81092068-81092087 | None:intergenic | 40.0% | |
| CTACCACTCCTAAGTTAAAG+AGG | - | chr3_3:81092070-81092089 | None:intergenic | 40.0% | |
| ! | GATGTTGCCTTATTGGGATA+TGG | + | chr3_3:81092141-81092160 | Msa0477020:CDS | 40.0% |
| TCTTGCAAATCTTGGCATTG+AGG | + | chr3_3:81092200-81092219 | Msa0477020:CDS | 40.0% | |
| ACTTCTCGACCGAAGAATTA+AGG | + | chr3_3:81092371-81092390 | Msa0477020:CDS | 40.0% | |
| TTGACATATCTTGTGTGCCA+AGG | + | chr3_3:81092476-81092495 | Msa0477020:intron | 40.0% | |
| TTCTTGATCAACTCTTCCAG+TGG | + | chr3_3:81092553-81092572 | Msa0477020:intron | 40.0% | |
| ! | GCTTGGTTAAGCTGTTGATT+TGG | - | chr3_3:81092621-81092640 | None:intergenic | 40.0% |
| AATCAACAGCTTAACCAAGC+AGG | + | chr3_3:81092621-81092640 | Msa0477020:CDS | 40.0% | |
| ATCAACAGCTTAACCAAGCA+GGG | + | chr3_3:81092622-81092641 | Msa0477020:CDS | 40.0% | |
| GCATTCTCAATTTACGAGAC+TGG | - | chr3_3:81092978-81092997 | None:intergenic | 40.0% | |
| !! | ATTTTGCTGTGAGGTGATTG+TGG | + | chr3_3:81093057-81093076 | Msa0477020:three_prime_UTR | 40.0% |
| !! | TTTTGCTGTGAGGTGATTGT+GGG | + | chr3_3:81093058-81093077 | Msa0477020:three_prime_UTR | 40.0% |
| ! | TCTCTCTAGCTTCACTCCTT+TGG | + | chr3_3:81085257-81085276 | Msa0477020:five_prime_UTR | 45.0% |
| GTTAGGGTTTGGGAATGGAA+AGG | - | chr3_3:81085476-81085495 | None:intergenic | 45.0% | |
| CAATCTGCGAGTTAGGGTTT+GGG | - | chr3_3:81085486-81085505 | None:intergenic | 45.0% | |
| GCAATCCAATCTGCGAGTTA+GGG | - | chr3_3:81085492-81085511 | None:intergenic | 45.0% | |
| AGCAATCCAATCTGCGAGTT+AGG | - | chr3_3:81085493-81085512 | None:intergenic | 45.0% | |
| ACTGTGTCAAGAATGGGTGT+TGG | - | chr3_3:81085629-81085648 | None:intergenic | 45.0% | |
| CTTGAAGAACCTTTCTCAGC+AGG | + | chr3_3:81085664-81085683 | Msa0477020:CDS | 45.0% | |
| GTTTCAACTCCTGCTGAGAA+AGG | - | chr3_3:81085676-81085695 | None:intergenic | 45.0% | |
| ACTGAATCCTAGTATGGCTG+TGG | + | chr3_3:81085754-81085773 | Msa0477020:CDS | 45.0% | |
| !! | GAATACGATGCATTTGGTGC+AGG | + | chr3_3:81086076-81086095 | Msa0477020:CDS | 45.0% |
| GGATGCAACAGTATATCTGC+TGG | + | chr3_3:81086103-81086122 | Msa0477020:CDS | 45.0% | |
| TTTCAGGAATGGCAGTTGCA+AGG | + | chr3_3:81086334-81086353 | Msa0477020:intron | 45.0% | |
| TTCAGGAATGGCAGTTGCAA+GGG | + | chr3_3:81086335-81086354 | Msa0477020:intron | 45.0% | |
| TATGAGGCAATGAGCAATGC+AGG | + | chr3_3:81086426-81086445 | Msa0477020:CDS | 45.0% | |
| ! | TCGAGCCCTCCTCAATTTTT+GGG | - | chr3_3:81086506-81086525 | None:intergenic | 45.0% |
| ! | TTCGAGCCCTCCTCAATTTT+TGG | - | chr3_3:81086507-81086526 | None:intergenic | 45.0% |
| CTCTATCTAGTACCCTTAGC+AGG | + | chr3_3:81086541-81086560 | Msa0477020:CDS | 45.0% | |
| !! | TTGTTGTTTGTACCGGTTGC+AGG | - | chr3_3:81087224-81087243 | None:intergenic | 45.0% |
| TGTTGATGTCTCTAGCACCA+TGG | - | chr3_3:81087320-81087339 | None:intergenic | 45.0% | |
| !!! | GGTGCCGTTATTTTTGAAGG+AGG | - | chr3_3:81087350-81087369 | None:intergenic | 45.0% |
| AATAACGGCACCATACCAAG+AGG | + | chr3_3:81087358-81087377 | Msa0477020:intron | 45.0% | |
| AGAAATGGGTCCTCTTGGTA+TGG | - | chr3_3:81087371-81087390 | None:intergenic | 45.0% | |
| AGCACGGCTCTTCTTGAAAA+GGG | - | chr3_3:81087425-81087444 | None:intergenic | 45.0% | |
| CATGGGTACCAAATTGAGGA+TGG | - | chr3_3:81087482-81087501 | None:intergenic | 45.0% | |
| GAAATTGAGAGGGAGAATGG+GGG | + | chr3_3:81087643-81087662 | Msa0477020:intron | 45.0% | |
| AGCTCGTCTTTGTGAGCATT+AGG | + | chr3_3:81087919-81087938 | Msa0477020:intron | 45.0% | |
| CATGGACACGATACGAGTAT+CGG | + | chr3_3:81088008-81088027 | Msa0477020:intron | 45.0% | |
| ACAAGTTAAACCACTAGGCC+AGG | - | chr3_3:81088387-81088406 | None:intergenic | 45.0% | |
| CTTGTTTGAAAGCAGCAAGG+GGG | + | chr3_3:81088402-81088421 | Msa0477020:intron | 45.0% | |
| !! | TTAGTTTTCAGCTGTCGCAG+TGG | - | chr3_3:81088555-81088574 | None:intergenic | 45.0% |
| CGGATCTTAGTATAGACCCA+TGG | - | chr3_3:81088634-81088653 | None:intergenic | 45.0% | |
| GAGAGATCGGAAACTAAGGA+GGG | + | chr3_3:81088763-81088782 | Msa0477020:intron | 45.0% | |
| AGAGATCGGAAACTAAGGAG+GGG | + | chr3_3:81088764-81088783 | Msa0477020:intron | 45.0% | |
| TTTGATACGTCGTCGATACG+CGG | - | chr3_3:81088866-81088885 | None:intergenic | 45.0% | |
| ! | GACAGAGTATCAGAGCGTAT+CGG | + | chr3_3:81088942-81088961 | Msa0477020:intron | 45.0% |
| ! | ATCAGAGCGTATCGGCATAT+CGG | + | chr3_3:81088950-81088969 | Msa0477020:intron | 45.0% |
| TCGGCATATCGGATACGATA+CGG | + | chr3_3:81088961-81088980 | Msa0477020:intron | 45.0% | |
| ! | TTTGACGTATCGGTGCTTCA+TGG | + | chr3_3:81088991-81089010 | Msa0477020:intron | 45.0% |
| ! | TTGACGTATCGGTGCTTCAT+GGG | + | chr3_3:81088992-81089011 | Msa0477020:intron | 45.0% |
| TAGAGACTGGAGGCCAAATA+AGG | - | chr3_3:81089106-81089125 | None:intergenic | 45.0% | |
| GTTGTATTACATAGGCCCAG+TGG | + | chr3_3:81089270-81089289 | Msa0477020:CDS | 45.0% | |
| TATTACATAGGCCCAGTGGA+TGG | + | chr3_3:81089274-81089293 | Msa0477020:CDS | 45.0% | |
| CGATATTGTGTCCATCCACT+GGG | - | chr3_3:81089288-81089307 | None:intergenic | 45.0% | |
| TCGATATTGTGTCCATCCAC+TGG | - | chr3_3:81089289-81089308 | None:intergenic | 45.0% | |
| ATAACTGACAAGCAGCAGGA+TGG | + | chr3_3:81089421-81089440 | Msa0477020:CDS | 45.0% | |
| GTGGTACGGAAAGAAACTCT+AGG | + | chr3_3:81089648-81089667 | Msa0477020:intron | 45.0% | |
| TTCAACAAGGGGGGAAATCT+AGG | - | chr3_3:81089931-81089950 | None:intergenic | 45.0% | |
| ACAAACCAAGCCCAATCTAC+TGG | + | chr3_3:81090056-81090075 | Msa0477020:intron | 45.0% | |
| ! | TTGGCTTCTTAGCTTGACTC+TGG | + | chr3_3:81090274-81090293 | Msa0477020:intron | 45.0% |
| GACATTGTGGTTGTTCATGC+AGG | + | chr3_3:81090558-81090577 | Msa0477020:CDS | 45.0% | |
| !! | GCTTCTGGTTTATCATGTGG+TGG | + | chr3_3:81090675-81090694 | Msa0477020:CDS | 45.0% |
| TTTACAGAGAGCCTATGACC+AGG | + | chr3_3:81090731-81090750 | Msa0477020:CDS | 45.0% | |
| ! | ATCCTATCTTTTGTCAGGGC+AGG | + | chr3_3:81090831-81090850 | Msa0477020:intron | 45.0% |
| GACCTGCCCGATATATATCT+AGG | - | chr3_3:81091088-81091107 | None:intergenic | 45.0% | |
| GAACCTTAAGGCTTCGTTTG+GGG | + | chr3_3:81091195-81091214 | Msa0477020:intron | 45.0% | |
| AACCTTAAGGCTTCGTTTGG+GGG | + | chr3_3:81091196-81091215 | Msa0477020:intron | 45.0% | |
| TTTGAGGGGACAGAAAGAGA+GGG | + | chr3_3:81091244-81091263 | Msa0477020:intron | 45.0% | |
| TTTAGGAGGGGATGACTTTG+GGG | - | chr3_3:81091401-81091420 | None:intergenic | 45.0% | |
| GTTTAGGAGGGGATGACTTT+GGG | - | chr3_3:81091402-81091421 | None:intergenic | 45.0% | |
| AGTTTAGGAGGGGATGACTT+TGG | - | chr3_3:81091403-81091422 | None:intergenic | 45.0% | |
| TCTGTTTGGGAGTTTAGGAG+GGG | - | chr3_3:81091413-81091432 | None:intergenic | 45.0% | |
| GTCTGTTTGGGAGTTTAGGA+GGG | - | chr3_3:81091414-81091433 | None:intergenic | 45.0% | |
| TAGGGTCTGTTTGGGAGTTT+AGG | - | chr3_3:81091418-81091437 | None:intergenic | 45.0% | |
| AAACTCCCAAACAGACCCTA+AGG | + | chr3_3:81091418-81091437 | Msa0477020:intron | 45.0% | |
| GGAATTGAGGATATCTGGTC+TGG | + | chr3_3:81091448-81091467 | Msa0477020:intron | 45.0% | |
| ! | ATTTGCGATCTGTGAGTTGG+TGG | + | chr3_3:81091526-81091545 | Msa0477020:intron | 45.0% |
| !! | TTTGCGATCTGTGAGTTGGT+GGG | + | chr3_3:81091527-81091546 | Msa0477020:intron | 45.0% |
| TGTTCTGCATACAAGTAGGC+AGG | - | chr3_3:81091559-81091578 | None:intergenic | 45.0% | |
| ACATGTTACGTGTCATGTCC+AGG | + | chr3_3:81091631-81091650 | Msa0477020:intron | 45.0% | |
| ATCAAATGCTCCACACTGGA+GGG | - | chr3_3:81091735-81091754 | None:intergenic | 45.0% | |
| TATCAAATGCTCCACACTGG+AGG | - | chr3_3:81091736-81091755 | None:intergenic | 45.0% | |
| ACAAGTTCAGCCTCATCAGA+TGG | - | chr3_3:81091800-81091819 | None:intergenic | 45.0% | |
| CTAGGATACCGAAAGCAAAC+TGG | - | chr3_3:81091860-81091879 | None:intergenic | 45.0% | |
| ! | CAGTTTGCTTTCGGTATCCT+AGG | + | chr3_3:81091858-81091877 | Msa0477020:CDS | 45.0% |
| GTTTGCTTTCGGTATCCTAG+GGG | + | chr3_3:81091860-81091879 | Msa0477020:CDS | 45.0% | |
| ! | TCCCCTCTTTAACTTAGGAG+TGG | + | chr3_3:81092064-81092083 | Msa0477020:intron | 45.0% |
| TCCAATAGACCCTTCCTCAA+CGG | - | chr3_3:81092310-81092329 | None:intergenic | 45.0% | |
| GAAGGGTCTATTGGAGGATT+TGG | + | chr3_3:81092315-81092334 | Msa0477020:CDS | 45.0% | |
| GTAAAACAATTGGTCGCCAC+TGG | - | chr3_3:81092572-81092591 | None:intergenic | 45.0% | |
| AGGATAGAGCTTCACGAGTA+CGG | - | chr3_3:81092692-81092711 | None:intergenic | 45.0% | |
| AAGATGCTTCGTGTCCTTTC+CGG | + | chr3_3:81092735-81092754 | Msa0477020:three_prime_UTR | 45.0% | |
| TGGTTCTCTTATGCACATCC+CGG | - | chr3_3:81092757-81092776 | None:intergenic | 45.0% | |
| !!! | AAAAAAATAATGTTTTTTTA+AGG | - | chr3_3:81087257-81087276 | None:intergenic | 5.0% |
| TGCGAGTTAGGGTTTGGGAA+TGG | - | chr3_3:81085481-81085500 | None:intergenic | 50.0% | |
| CCAATCTGCGAGTTAGGGTT+TGG | - | chr3_3:81085487-81085506 | None:intergenic | 50.0% | |
| CCAAACCCTAACTCGCAGAT+TGG | + | chr3_3:81085484-81085503 | Msa0477020:CDS | 50.0% | |
| GAATCCTAGTATGGCTGTGG+TGG | + | chr3_3:81085757-81085776 | Msa0477020:CDS | 50.0% | |
| !! | GATGCATTTGGTGCAGGTCA+TGG | + | chr3_3:81086082-81086101 | Msa0477020:CDS | 50.0% |
| TTGGACAACTATGTCTGGCC+AGG | + | chr3_3:81086401-81086420 | Msa0477020:CDS | 50.0% | |
| TATGTCTGGCCAGGTCTATG+AGG | + | chr3_3:81086410-81086429 | Msa0477020:CDS | 50.0% | |
| TGCTCATTGCCTCATAGACC+TGG | - | chr3_3:81086422-81086441 | None:intergenic | 50.0% | |
| ! | ACTGGATTGGAGCCTGCTAA+GGG | - | chr3_3:81086556-81086575 | None:intergenic | 50.0% |
| ! | TACTGGATTGGAGCCTGCTA+AGG | - | chr3_3:81086557-81086576 | None:intergenic | 50.0% |
| CAGCACGGCTCTTCTTGAAA+AGG | - | chr3_3:81087426-81087445 | None:intergenic | 50.0% | |
| GAATGGGGGAGAAATGGAGA+TGG | + | chr3_3:81087657-81087676 | Msa0477020:intron | 50.0% | |
| GATACGACGCGTATCCGATA+CGG | + | chr3_3:81088030-81088049 | Msa0477020:intron | 50.0% | |
| TGAACGACGTATCGCCGTAT+CGG | - | chr3_3:81088047-81088066 | None:intergenic | 50.0% | |
| TTTCAGCTGTCGCAGTGGAA+AGG | - | chr3_3:81088550-81088569 | None:intergenic | 50.0% | |
| AGAAAACCTAGGGGATGCCA+TGG | + | chr3_3:81088605-81088624 | Msa0477020:intron | 50.0% | |
| GGAGAGATCGGAAACTAAGG+AGG | + | chr3_3:81088762-81088781 | Msa0477020:intron | 50.0% | |
| AGATGAACCAGCCGTATCAG+TGG | + | chr3_3:81088821-81088840 | Msa0477020:intron | 50.0% | |
| GGATTCAATGGGTCCTGTCT+TGG | + | chr3_3:81089345-81089364 | Msa0477020:CDS | 50.0% | |
| ACCAAGCCCAATCTACTGGT+TGG | + | chr3_3:81090060-81090079 | Msa0477020:intron | 50.0% | |
| TCCAACCAGTAGATTGGGCT+TGG | - | chr3_3:81090064-81090083 | None:intergenic | 50.0% | |
| ! | GCTTCTTAGCTTGACTCTGG+TGG | + | chr3_3:81090277-81090296 | Msa0477020:intron | 50.0% |
| ! | GCTGGTCGGCTTCAAACATA+TGG | + | chr3_3:81090489-81090508 | Msa0477020:CDS | 50.0% |
| CACGCTGTCACATTTGCTTC+TGG | + | chr3_3:81090660-81090679 | Msa0477020:CDS | 50.0% | |
| GACCTGCCCTGACAAAAGAT+AGG | - | chr3_3:81090836-81090855 | None:intergenic | 50.0% | |
| GGCCTAGATATATATCGGGC+AGG | + | chr3_3:81091083-81091102 | Msa0477020:intron | 50.0% | |
| AACCCCCAAACGAAGCCTTA+AGG | - | chr3_3:81091201-81091220 | None:intergenic | 50.0% | |
| TAAGGCTTCGTTTGGGGGTT+TGG | + | chr3_3:81091201-81091220 | Msa0477020:intron | 50.0% | |
| AGGGAATGGCAGGACTTTGA+GGG | + | chr3_3:81091229-81091248 | Msa0477020:intron | 50.0% | |
| ! | CTTTGAGGGGACAGAAAGAG+AGG | + | chr3_3:81091243-81091262 | Msa0477020:intron | 50.0% |
| GGTCTGTTTGGGAGTTTAGG+AGG | - | chr3_3:81091415-81091434 | None:intergenic | 50.0% | |
| TGTTACGTGTCATGTCCAGG+TGG | + | chr3_3:81091634-81091653 | Msa0477020:intron | 50.0% | |
| GATCAACATCGTGAACCACC+TGG | - | chr3_3:81091652-81091671 | None:intergenic | 50.0% | |
| ! | GCAGGATTGGTAGGTTCAGA+TGG | + | chr3_3:81091707-81091726 | Msa0477020:CDS | 50.0% |
| TCAAATGCTCCACACTGGAG+GGG | - | chr3_3:81091734-81091753 | None:intergenic | 50.0% | |
| TGTCATGGCACCATCTGATG+AGG | + | chr3_3:81091787-81091806 | Msa0477020:CDS | 50.0% | |
| TGAGGCTGAACTTGTGCACA+TGG | + | chr3_3:81091805-81091824 | Msa0477020:CDS | 50.0% | |
| AGCTTCGTCTTTCCCAACCA+AGG | - | chr3_3:81091888-81091907 | None:intergenic | 50.0% | |
| AGGTGACTGTTGCTGATGCA+AGG | + | chr3_3:81092220-81092239 | Msa0477020:CDS | 50.0% | |
| CTCAGAAGCTCGATGTCAAG+GGG | - | chr3_3:81092255-81092274 | None:intergenic | 50.0% | |
| CCTCAGAAGCTCGATGTCAA+GGG | - | chr3_3:81092256-81092275 | None:intergenic | 50.0% | |
| ACCGTTGAGGAAGGGTCTAT+TGG | + | chr3_3:81092306-81092325 | Msa0477020:CDS | 50.0% | |
| GTTGAGGAAGGGTCTATTGG+AGG | + | chr3_3:81092309-81092328 | Msa0477020:CDS | 50.0% | |
| CTTAACCAAGCAGGGTTGAC+TGG | + | chr3_3:81092630-81092649 | Msa0477020:CDS | 50.0% | |
| ! | TGCCACAGCATTGAGTTTGC+TGG | + | chr3_3:81092665-81092684 | Msa0477020:CDS | 50.0% |
| ! | GCCACAGCATTGAGTTTGCT+GGG | + | chr3_3:81092666-81092685 | Msa0477020:CDS | 50.0% |
| AGATGCTTCGTGTCCTTTCC+GGG | + | chr3_3:81092736-81092755 | Msa0477020:three_prime_UTR | 50.0% | |
| CTCTTATGCACATCCCGGAA+AGG | - | chr3_3:81092752-81092771 | None:intergenic | 50.0% | |
| AGGTCCACCACAGCCATACT+AGG | - | chr3_3:81085764-81085783 | None:intergenic | 55.0% | |
| GTCTCTAGCACCATGGCCAT+CGG | - | chr3_3:81087313-81087332 | None:intergenic | 55.0% | |
| GAGGGAGAATGGGGGAGAAA+TGG | + | chr3_3:81087651-81087670 | Msa0477020:intron | 55.0% | |
| CGTACAATTGAACGGGCAGC+TGG | + | chr3_3:81088257-81088276 | Msa0477020:intron | 55.0% | |
| ! | TGAAAGCAGCAAGGGGGTGT+AGG | + | chr3_3:81088408-81088427 | Msa0477020:intron | 55.0% |
| ! | AGTGTCGAACTCGCGACCAT+TGG | + | chr3_3:81088509-81088528 | Msa0477020:intron | 55.0% |
| GTGTCGAACTCGCGACCATT+GGG | + | chr3_3:81088510-81088529 | Msa0477020:intron | 55.0% | |
| GTATAGACCCATGGGAGCCA+TGG | - | chr3_3:81088625-81088644 | None:intergenic | 55.0% | |
| CCTCGGATACGCCACTGATA+CGG | - | chr3_3:81088835-81088854 | None:intergenic | 55.0% | |
| CCTGTGGCAAAGCAGAAGTG+GGG | - | chr3_3:81089141-81089160 | None:intergenic | 55.0% | |
| CCCTGTGGCAAAGCAGAAGT+GGG | - | chr3_3:81089142-81089161 | None:intergenic | 55.0% | |
| CCCACTTCTGCTTTGCCACA+GGG | + | chr3_3:81089139-81089158 | Msa0477020:intron | 55.0% | |
| ACCCTGTGGCAAAGCAGAAG+TGG | - | chr3_3:81089143-81089162 | None:intergenic | 55.0% | |
| GACGCATTTGATGCCCACTC+AGG | - | chr3_3:81089909-81089928 | None:intergenic | 55.0% | |
| CTTCGTTTGGGGGTTTGGAG+AGG | + | chr3_3:81091206-81091225 | Msa0477020:intron | 55.0% | |
| GTTTGGGGGTTTGGAGAGGA+GGG | + | chr3_3:81091210-81091229 | Msa0477020:intron | 55.0% | |
| TTTGGAGAGGAGGGAATGGC+AGG | + | chr3_3:81091219-81091238 | Msa0477020:intron | 55.0% | |
| GAGGGAATGGCAGGACTTTG+AGG | + | chr3_3:81091228-81091247 | Msa0477020:intron | 55.0% | |
| GGGAATGGCAGGACTTTGAG+GGG | + | chr3_3:81091230-81091249 | Msa0477020:intron | 55.0% | |
| GGCTGAACTTGTGCACATGG+TGG | + | chr3_3:81091808-81091827 | Msa0477020:CDS | 55.0% | |
| !! | TATCCTAGGGGTGCCTTGGT+TGG | + | chr3_3:81091872-81091891 | Msa0477020:CDS | 55.0% |
| !! | ATCCTAGGGGTGCCTTGGTT+GGG | + | chr3_3:81091873-81091892 | Msa0477020:CDS | 55.0% |
| CCCTTGACATCGAGCTTCTG+AGG | + | chr3_3:81092253-81092272 | Msa0477020:CDS | 55.0% | |
| GCCTCAGAAGCTCGATGTCA+AGG | - | chr3_3:81092257-81092276 | None:intergenic | 55.0% | |
| GATGTCCAGTCAACCCTGCT+TGG | - | chr3_3:81092638-81092657 | None:intergenic | 55.0% | |
| GCCCAGCAAACTCAATGCTG+TGG | - | chr3_3:81092670-81092689 | None:intergenic | 55.0% | |
| GGATACGCCACTGATACGGC+TGG | - | chr3_3:81088831-81088850 | None:intergenic | 60.0% | |
| CCGTATCAGTGGCGTATCCG+AGG | + | chr3_3:81088832-81088851 | Msa0477020:intron | 60.0% | |
| GTGGCGTATCCGAGGCATGT+CGG | + | chr3_3:81088840-81088859 | Msa0477020:intron | 60.0% | |
| CCCCACTTCTGCTTTGCCAC+AGG | + | chr3_3:81089138-81089157 | Msa0477020:intron | 60.0% | |
| !! | CGTGGTATGATGGGTCCACC+AGG | + | chr3_3:81089223-81089242 | Msa0477020:CDS | 60.0% |
| CGTTTGGGGGTTTGGAGAGG+AGG | + | chr3_3:81091209-81091228 | Msa0477020:intron | 60.0% | |
| GGGGTTTGGAGAGGAGGGAA+TGG | + | chr3_3:81091215-81091234 | Msa0477020:intron | 60.0% | |
| TCAGATGGTCCCCTCCAGTG+TGG | + | chr3_3:81091722-81091741 | Msa0477020:CDS | 60.0% | |
| !! | TCGGTATCCTAGGGGTGCCT+TGG | + | chr3_3:81091868-81091887 | Msa0477020:CDS | 60.0% |
| ! | TTCCCAACCAAGGCACCCCT+AGG | - | chr3_3:81091878-81091897 | None:intergenic | 60.0% |
| TGGGAGCCATGGCATCCCCT+AGG | - | chr3_3:81088614-81088633 | None:intergenic | 65.0% | |
| AGGGGATGCCATGGCTCCCA+TGG | + | chr3_3:81088614-81088633 | Msa0477020:intron | 65.0% | |
| GGGGATGCCATGGCTCCCAT+GGG | + | chr3_3:81088615-81088634 | Msa0477020:intron | 65.0% | |
| GATACGCGGCCGACATGCCT+CGG | - | chr3_3:81088852-81088871 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 81085236 | 81093168 | 81085236 | ID=Msa0477020;Name=Msa0477020 |
| chr3_3 | mRNA | 81085236 | 81093168 | 81085236 | ID=Msa0477020-mRNA-1;Parent=Msa0477020;Name=Msa0477020-mRNA-1;_AED=0.07;_eAED=0.07;_QI=198|1|1|1|1|1|8|443|709 |
| chr3_3 | exon | 81085236 | 81085850 | 81085236 | ID=Msa0477020-mRNA-1:exon:22317;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81085980 | 81086130 | 81085980 | ID=Msa0477020-mRNA-1:exon:22318;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81086340 | 81086608 | 81086340 | ID=Msa0477020-mRNA-1:exon:22319;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81089160 | 81089442 | 81089160 | ID=Msa0477020-mRNA-1:exon:22320;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81090460 | 81090752 | 81090460 | ID=Msa0477020-mRNA-1:exon:22321;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81091653 | 81091931 | 81091653 | ID=Msa0477020-mRNA-1:exon:22322;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81092108 | 81092392 | 81092108 | ID=Msa0477020-mRNA-1:exon:22323;Parent=Msa0477020-mRNA-1 |
| chr3_3 | exon | 81092573 | 81093168 | 81092573 | ID=Msa0477020-mRNA-1:exon:22324;Parent=Msa0477020-mRNA-1 |
| chr3_3 | five_prime_UTR | 81085236 | 81085433 | 81085236 | ID=Msa0477020-mRNA-1:five_prime_utr;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81085434 | 81085850 | 81085434 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81085980 | 81086130 | 81085980 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81086340 | 81086608 | 81086340 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81089160 | 81089442 | 81089160 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81090460 | 81090752 | 81090460 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81091653 | 81091931 | 81091653 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81092108 | 81092392 | 81092108 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | CDS | 81092573 | 81092725 | 81092573 | ID=Msa0477020-mRNA-1:cds;Parent=Msa0477020-mRNA-1 |
| chr3_3 | three_prime_UTR | 81092726 | 81093168 | 81092726 | ID=Msa0477020-mRNA-1:three_prime_utr;Parent=Msa0477020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
