Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371310 | XP_003603440.1 | 98.307 | 709 | 11 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1436 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371310 | sp|O78328|DXS_CAPAN | 61.985 | 655 | 243 | 4 | 58 | 707 | 65 | 718 | 0.0 | 811 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371310 | G7JBM5 | 98.307 | 709 | 11 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1436 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014710 | Msa1371310 | 0.807181 | 5.731374e-50 | -8.615850e-47 |
Msa0030180 | Msa1371310 | 0.803055 | 4.184302e-49 | -8.615850e-47 |
Msa0031360 | Msa1371310 | 0.832719 | 8.051818e-56 | -8.615850e-47 |
Msa0072000 | Msa1371310 | 0.807799 | 4.236106e-50 | -8.615850e-47 |
Msa0076670 | Msa1371310 | 0.833943 | 3.988151e-56 | -8.615850e-47 |
Msa0078060 | Msa1371310 | 0.801583 | 8.409861e-49 | -8.615850e-47 |
Msa0079400 | Msa1371310 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
Msa0105070 | Msa1371310 | 0.817991 | 2.473943e-52 | -8.615850e-47 |
Msa0116770 | Msa1371310 | 0.808197 | 3.485544e-50 | -8.615850e-47 |
Msa1351620 | Msa1371310 | 0.804097 | 2.544463e-49 | -8.615850e-47 |
Msa1371310 | Msa1372760 | 0.807347 | 5.283825e-50 | -8.615850e-47 |
Msa1371310 | Msa1376890 | 0.804366 | 2.236062e-49 | -8.615850e-47 |
Msa1371310 | Msa1393410 | 0.833656 | 4.705073e-56 | -8.615850e-47 |
Msa1371310 | Msa1408790 | 0.808540 | 2.945836e-50 | -8.615850e-47 |
Msa1371310 | Msa1423880 | 0.817643 | 2.964464e-52 | -8.615850e-47 |
Msa1371310 | Msa1424680 | 0.816306 | 5.918563e-52 | -8.615850e-47 |
Msa1371310 | Msa1435420 | 0.833460 | 5.264870e-56 | -8.615850e-47 |
Msa0623080 | Msa1371310 | 0.812991 | 3.208739e-51 | -8.615850e-47 |
Msa0626220 | Msa1371310 | 0.803253 | 3.807829e-49 | -8.615850e-47 |
Msa0626280 | Msa1371310 | 0.827409 | 1.589646e-54 | -8.615850e-47 |
Msa0638610 | Msa1371310 | 0.800819 | 1.204885e-48 | -8.615850e-47 |
Msa0658570 | Msa1371310 | 0.801280 | 9.698720e-49 | -8.615850e-47 |
Msa0660300 | Msa1371310 | 0.803945 | 2.735412e-49 | -8.615850e-47 |
Msa0663250 | Msa1371310 | 0.807244 | 5.556945e-50 | -8.615850e-47 |
Msa0664570 | Msa1371310 | 0.800074 | 1.709387e-48 | -8.615850e-47 |
Msa0682550 | Msa1371310 | 0.807731 | 4.379149e-50 | -8.615850e-47 |
Msa0693380 | Msa1371310 | 0.806173 | 9.355563e-50 | -8.615850e-47 |
Msa0716500 | Msa1371310 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
Msa0740640 | Msa1371310 | 0.801808 | 7.560154e-49 | -8.615850e-47 |
Msa0760130 | Msa1371310 | 0.803830 | 2.890445e-49 | -8.615850e-47 |
Msa0773310 | Msa1371310 | 0.801068 | 1.071707e-48 | -8.615850e-47 |
Msa0828660 | Msa1371310 | 0.833909 | 4.067062e-56 | -8.615850e-47 |
Msa0165210 | Msa1371310 | 0.814777 | 1.296337e-51 | -8.615850e-47 |
Msa0171300 | Msa1371310 | 0.850752 | 1.385918e-60 | -8.615850e-47 |
Msa0183590 | Msa1371310 | 0.802062 | 6.705715e-49 | -8.615850e-47 |
Msa0193890 | Msa1371310 | 0.826560 | 2.536805e-54 | -8.615850e-47 |
Msa0197660 | Msa1371310 | 0.817821 | 2.702992e-52 | -8.615850e-47 |
Msa0226890 | Msa1371310 | 0.822163 | 2.743235e-53 | -8.615850e-47 |
Msa1224830 | Msa1371310 | 0.806647 | 7.431884e-50 | -8.615850e-47 |
Msa1229600 | Msa1371310 | 0.836264 | 1.035962e-56 | -8.615850e-47 |
Msa1233890 | Msa1371310 | 0.813851 | 2.076083e-51 | -8.615850e-47 |
Msa1238930 | Msa1371310 | 0.805659 | 1.199749e-49 | -8.615850e-47 |
Msa1239530 | Msa1371310 | 0.812634 | 3.840482e-51 | -8.615850e-47 |
Msa1262750 | Msa1371310 | 0.826768 | 2.263064e-54 | -8.615850e-47 |
Msa1282500 | Msa1371310 | 0.825527 | 4.464364e-54 | -8.615850e-47 |
Msa1305350 | Msa1371310 | 0.804177 | 2.448072e-49 | -8.615850e-47 |
Msa1306750 | Msa1371310 | 0.811393 | 7.161866e-51 | -8.615850e-47 |
Msa1306760 | Msa1371310 | 0.800368 | 1.489512e-48 | -8.615850e-47 |
Msa1310210 | Msa1371310 | 0.831816 | 1.347067e-55 | -8.615850e-47 |
Msa1313150 | Msa1371310 | 0.814120 | 1.811568e-51 | -8.615850e-47 |
Msa1332000 | Msa1371310 | 0.817619 | 3.001524e-52 | -8.615850e-47 |
Msa1333730 | Msa1371310 | 0.808297 | 3.319445e-50 | -8.615850e-47 |
Msa0365490 | Msa1371310 | 0.804509 | 2.087541e-49 | -8.615850e-47 |
Msa0382870 | Msa1371310 | 0.985369 | 2.366457e-163 | -8.615850e-47 |
Msa0388960 | Msa1371310 | 0.820172 | 7.892059e-53 | -8.615850e-47 |
Msa0422500 | Msa1371310 | 0.821184 | 4.621801e-53 | -8.615850e-47 |
Msa0432930 | Msa1371310 | 0.981036 | 1.270696e-151 | -8.615850e-47 |
Msa0450350 | Msa1371310 | 0.819433 | 1.164500e-52 | -8.615850e-47 |
Msa0458440 | Msa1371310 | 0.806392 | 8.410809e-50 | -8.615850e-47 |
Msa0477020 | Msa1371310 | 0.981429 | 1.441645e-152 | -8.615850e-47 |
Msa1000880 | Msa1371310 | 0.805634 | 1.214267e-49 | -8.615850e-47 |
Msa1000940 | Msa1371310 | 0.818278 | 2.130601e-52 | -8.615850e-47 |
Msa1012590 | Msa1371310 | -0.810783 | 9.708309e-51 | -8.615850e-47 |
Msa1028270 | Msa1371310 | 0.827723 | 1.336685e-54 | -8.615850e-47 |
Msa1030970 | Msa1371310 | 0.819822 | 9.490168e-53 | -8.615850e-47 |
Msa1046300 | Msa1371310 | 0.833879 | 4.137873e-56 | -8.615850e-47 |
Msa1082500 | Msa1371310 | 0.823219 | 1.558349e-53 | -8.615850e-47 |
Msa1085300 | Msa1371310 | 0.800336 | 1.511517e-48 | -8.615850e-47 |
Msa1085920 | Msa1371310 | 0.800740 | 1.250664e-48 | -8.615850e-47 |
Msa1087470 | Msa1371310 | 0.803401 | 3.547579e-49 | -8.615850e-47 |
Msa1097060 | Msa1371310 | 0.804034 | 2.622370e-49 | -8.615850e-47 |
Msa0239800 | Msa1371310 | 0.814217 | 1.723817e-51 | -8.615850e-47 |
Msa0277820 | Msa1371310 | 0.805146 | 1.537086e-49 | -8.615850e-47 |
Msa0317510 | Msa1371310 | 0.822700 | 2.058519e-53 | -8.615850e-47 |
Msa0335040 | Msa1371310 | 0.809899 | 1.506101e-50 | -8.615850e-47 |
Msa0340690 | Msa1371310 | 0.807537 | 4.815078e-50 | -8.615850e-47 |
Msa0340710 | Msa1371310 | 0.800890 | 1.165583e-48 | -8.615850e-47 |
Msa0344590 | Msa1371310 | 0.800075 | 1.708380e-48 | -8.615850e-47 |
Msa1165520 | Msa1371310 | 0.832087 | 1.154332e-55 | -8.615850e-47 |
Msa1179940 | Msa1371310 | 0.815063 | 1.120238e-51 | -8.615850e-47 |
Msa1179970 | Msa1371310 | 0.817522 | 3.156463e-52 | -8.615850e-47 |
Msa1185540 | Msa1371310 | 0.806487 | 8.032561e-50 | -8.615850e-47 |
Msa1199620 | Msa1371310 | 0.801392 | 9.199656e-49 | -8.615850e-47 |
Msa0484780 | Msa1371310 | 0.822345 | 2.489169e-53 | -8.615850e-47 |
Msa0511250 | Msa1371310 | 0.810966 | 8.863664e-51 | -8.615850e-47 |
Msa0517490 | Msa1371310 | 0.805424 | 1.343782e-49 | -8.615850e-47 |
Msa0523940 | Msa1371310 | 0.812864 | 3.420613e-51 | -8.615850e-47 |
Msa0535320 | Msa1371310 | 0.808694 | 2.730604e-50 | -8.615850e-47 |
Msa0554050 | Msa1371310 | 0.806246 | 9.027987e-50 | -8.615850e-47 |
Msa0562440 | Msa1371310 | 0.801688 | 8.002648e-49 | -8.615850e-47 |
Msa0908050 | Msa1371310 | 0.806822 | 6.824007e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371310 | MtrunA17_Chr3g0138171 | 98.307 | 709 | 11 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1436 |
Msa1371310 | MtrunA17_Chr4g0066611 | 61.457 | 659 | 246 | 4 | 55 | 707 | 60 | 716 | 0.0 | 820 |
Msa1371310 | MtrunA17_Chr2g0286641 | 57.589 | 672 | 274 | 6 | 44 | 709 | 50 | 716 | 0.0 | 776 |
Msa1371310 | MtrunA17_Chr8g0367201 | 56.555 | 656 | 275 | 5 | 58 | 706 | 58 | 710 | 0.0 | 753 |
Msa1371310 | MtrunA17_Chr8g0367181 | 56.707 | 656 | 274 | 5 | 58 | 706 | 58 | 710 | 0.0 | 752 |
Msa1371310 | MtrunA17_Chr7g0214101 | 27.468 | 233 | 142 | 8 | 422 | 635 | 66 | 290 | 1.68e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1371310 | AT5G11380.1 | 68.398 | 693 | 192 | 5 | 19 | 707 | 30 | 699 | 0.0 | 959 |
Msa1371310 | AT4G15560.1 | 59.639 | 664 | 257 | 5 | 49 | 704 | 56 | 716 | 0.0 | 797 |
Msa1371310 | AT3G21500.3 | 55.224 | 670 | 260 | 5 | 41 | 704 | 39 | 674 | 0.0 | 733 |
Msa1371310 | AT5G11380.3 | 64.632 | 557 | 170 | 5 | 19 | 571 | 30 | 563 | 0.0 | 723 |
Msa1371310 | AT5G11380.2 | 65.209 | 549 | 164 | 5 | 19 | 563 | 30 | 555 | 0.0 | 720 |
Msa1371310 | AT5G11380.4 | 65.844 | 527 | 153 | 5 | 19 | 541 | 30 | 533 | 0.0 | 692 |
Msa1371310 | AT3G21500.1 | 54.167 | 624 | 247 | 5 | 41 | 659 | 39 | 628 | 0.0 | 667 |
Msa1371310 | AT3G21500.2 | 54.080 | 625 | 247 | 5 | 41 | 659 | 39 | 629 | 0.0 | 667 |
Msa1371310 | AT5G50850.1 | 29.130 | 230 | 142 | 8 | 422 | 635 | 74 | 298 | 5.76e-14 | 74.7 |
Find 194 sgRNAs with CRISPR-Local
Find 598 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAGATGCTTCGTGTCCTTTC+CGG | 0.206226 | tig0019197:-49314 | Msa1371310:three_prime_UTR |
AAACTTTCGGAAAGATTTAC+TGG | 0.231822 | tig0019197:+55481 | None:intergenic |
TGATTCTGGAAAGGGGAAAT+TGG | 0.233981 | tig0019197:+56532 | None:intergenic |
AGAATGCAAAAGGCTTTATT+AGG | 0.238114 | tig0019197:-49272 | Msa1371310:three_prime_UTR |
GCCGTCACTTAAACTGTTTA+TGG | 0.240402 | tig0019197:-51454 | Msa1371310:CDS |
TCTTCAAGAAGTAGCTTCTT+TGG | 0.252475 | tig0019197:-52725 | Msa1371310:CDS |
TGCCACAGCATTGAGTTTGC+TGG | 0.261355 | tig0019197:-49384 | Msa1371310:CDS |
CACGCTGTCACATTTGCTTC+TGG | 0.266276 | tig0019197:-51387 | Msa1371310:CDS |
GAAAGAACATTTCCATCGTT+TGG | 0.276127 | tig0019197:+56816 | None:intergenic |
CATTCACTTCTTGCAAATCT+TGG | 0.276684 | tig0019197:-49857 | Msa1371310:CDS |
AGGTTACTTGGACTCAAATT+TGG | 0.278392 | tig0019197:-55606 | Msa1371310:CDS |
AGAAGAATACAAGGTGATTC+TGG | 0.295885 | tig0019197:+56518 | None:intergenic |
GCTCAATTTATTGCTCTTGA+TGG | 0.301990 | tig0019197:-49701 | Msa1371310:CDS |
GGTAAAGATGTTGCCTTATT+GGG | 0.306782 | tig0019197:-49914 | Msa1371310:CDS |
GAAGGGTCTATTGGAGGATT+TGG | 0.309133 | tig0019197:-49734 | Msa1371310:CDS |
GGTGCCATGACAATCATATT+TGG | 0.314187 | tig0019197:+50273 | None:intergenic |
GTCATAGGCTCTCTGTAAAA+AGG | 0.315685 | tig0019197:+51320 | None:intergenic |
TCTCTCTAGCTTCACTCCTT+TGG | 0.320738 | tig0019197:-56795 | Msa1371310:five_prime_UTR |
GTCTTTGTCTTTCTCAGCTT+CGG | 0.321151 | tig0019197:+51509 | None:intergenic |
TAGCAGCTTCTCTAAACTTT+CGG | 0.328548 | tig0019197:+55468 | None:intergenic |
AGGTAAAGATGTTGCCTTAT+TGG | 0.329622 | tig0019197:-49915 | Msa1371310:CDS |
ATGCTAACATGGGTATAATA+TGG | 0.330105 | tig0019197:-49035 | Msa1371310:three_prime_UTR |
AGCAATCCAATCTGCGAGTT+AGG | 0.330179 | tig0019197:+56562 | None:intergenic |
ACTTCTCGACCGAAGAATTA+AGG | 0.337143 | tig0019197:-49678 | Msa1371310:intron |
CTACTCTATTTGAAGAGCTT+GGG | 0.339586 | tig0019197:-52801 | Msa1371310:CDS |
AATATTACTGAATCCTAGTA+TGG | 0.348105 | tig0019197:-56304 | Msa1371310:CDS |
CGTTGGTCAATTACCTCAAT+TGG | 0.351062 | tig0019197:+50126 | None:intergenic |
CCAATCTGCGAGTTAGGGTT+TGG | 0.351819 | tig0019197:+56568 | None:intergenic |
TGTTATAACTGATGAAAATC+AGG | 0.353490 | tig0019197:-52677 | Msa1371310:CDS |
GGATTCAATGGGTCCTGTCT+TGG | 0.353501 | tig0019197:-52704 | Msa1371310:CDS |
AGATGCTTCGTGTCCTTTCC+GGG | 0.354269 | tig0019197:-49313 | Msa1371310:three_prime_UTR |
TATCCTAGGGGTGCCTTGGT+TGG | 0.359144 | tig0019197:-50177 | Msa1371310:CDS |
CAGTTTGCTTTCGGTATCCT+AGG | 0.359222 | tig0019197:-50191 | Msa1371310:CDS |
CATTGATCCATATCCCAATA+AGG | 0.366694 | tig0019197:+49901 | None:intergenic |
AAAGAAAATTGCAAGTGTTA+AGG | 0.366886 | tig0019197:-48942 | Msa1371310:three_prime_UTR |
GCAGTTGCAAGGGATATTAA+AGG | 0.367112 | tig0019197:-55707 | Msa1371310:CDS |
TATGCACATAAGATACTTAC+AGG | 0.367465 | tig0019197:-56069 | Msa1371310:CDS |
GATGTTGCCTTATTGGGATA+TGG | 0.373978 | tig0019197:-49908 | Msa1371310:CDS |
AGTAGCTTCTTTGGATTCAA+TGG | 0.378602 | tig0019197:-52716 | Msa1371310:CDS |
CACAATTCACAAACACATAA+AGG | 0.378697 | tig0019197:+49340 | None:intergenic |
TCGATATTGTGTCCATCCAC+TGG | 0.382005 | tig0019197:+52763 | None:intergenic |
AACTAATTACCTTAATTCTT+CGG | 0.383912 | tig0019197:+49669 | None:intergenic |
ACCGTTGAGGAAGGGTCTAT+TGG | 0.384406 | tig0019197:-49743 | Msa1371310:CDS |
ATGATCAACCAGTTTGCTTT+CGG | 0.387179 | tig0019197:-50200 | Msa1371310:CDS |
GAAGAAGGTATAATGCAAAA+TGG | 0.389504 | tig0019197:+51342 | None:intergenic |
TTTGAAGATTTGAGTAATGA+TGG | 0.391316 | tig0019197:-56634 | Msa1371310:exon |
GCTTGGTTAAGCTGTTGATT+TGG | 0.391371 | tig0019197:+49431 | None:intergenic |
CTTGAAGAACCTTTCTCAGC+AGG | 0.397023 | tig0019197:-56388 | Msa1371310:CDS |
GATTCTGGAAAGGGGAAATT+GGG | 0.398441 | tig0019197:+56533 | None:intergenic |
ACTTTCGTTAACACTGTGTT+TGG | 0.402572 | tig0019197:+56760 | None:intergenic |
ATCCTAGGGGTGCCTTGGTT+GGG | 0.404456 | tig0019197:-50176 | Msa1371310:CDS |
TCTACTCTATTTGAAGAGCT+TGG | 0.406045 | tig0019197:-52802 | Msa1371310:CDS |
TTAGTTCTGATTTGCATGTC+TGG | 0.406158 | tig0019197:-49218 | Msa1371310:three_prime_UTR |
CCAAACCCTAACTCGCAGAT+TGG | 0.406186 | tig0019197:-56568 | Msa1371310:CDS |
CGAGTGATCAAAACAGATTA+TGG | 0.410982 | tig0019197:-56726 | Msa1371310:five_prime_UTR |
CTGATATTGATGATTTCTAC+TGG | 0.411312 | tig0019197:-56458 | Msa1371310:CDS |
TCCCACAATATCTTGTCAAC+TGG | 0.413014 | tig0019197:+56237 | None:intergenic |
ATAAGTATGAACCTGGTCAT+AGG | 0.419660 | tig0019197:+51305 | None:intergenic |
GACATTGTGGTTGTTCATGC+AGG | 0.429229 | tig0019197:-51489 | Msa1371310:CDS |
TGATTGCTTTGTGGAGAGTT+TGG | 0.431702 | tig0019197:-51535 | Msa1371310:CDS |
GTTTCAACTCCTGCTGAGAA+AGG | 0.438184 | tig0019197:+56379 | None:intergenic |
GAGAGTGAATACGATGCATT+TGG | 0.440095 | tig0019197:-55982 | Msa1371310:CDS |
AATGAGCAATGCAGGTTACT+TGG | 0.443326 | tig0019197:-55618 | Msa1371310:CDS |
TAACTGTCTGGTAAAACAAT+TGG | 0.443341 | tig0019197:+49470 | None:intergenic |
CTTATTGGGATATGGATCAA+TGG | 0.444909 | tig0019197:-49900 | Msa1371310:CDS |
CTTAACCAAGCAGGGTTGAC+TGG | 0.445093 | tig0019197:-49419 | Msa1371310:CDS |
TCGGTATCCTAGGGGTGCCT+TGG | 0.446965 | tig0019197:-50181 | Msa1371310:CDS |
ATACAAGGTGATTCTGGAAA+GGG | 0.448453 | tig0019197:+56524 | None:intergenic |
CAATCTGCGAGTTAGGGTTT+GGG | 0.451051 | tig0019197:+56569 | None:intergenic |
TACTGGATTGGAGCCTGCTA+AGG | 0.451075 | tig0019197:+55498 | None:intergenic |
GAATGGAAAGGGATCACAAA+TGG | 0.451871 | tig0019197:+56591 | None:intergenic |
AGGTCCACCACAGCCATACT+AGG | 0.452040 | tig0019197:+56291 | None:intergenic |
CAGTAGAAATCATCAATATC+AGG | 0.455874 | tig0019197:+56459 | None:intergenic |
AAAAGAGTGTCAAATAGAAA+GGG | 0.457000 | tig0019197:-49157 | Msa1371310:three_prime_UTR |
TTCGGAAAGATTTACTGGAT+TGG | 0.457275 | tig0019197:+55486 | None:intergenic |
GAAAAGAGTGTCAAATAGAA+AGG | 0.459905 | tig0019197:-49158 | Msa1371310:three_prime_UTR |
TCTTGCAAATCTTGGCATTG+AGG | 0.460171 | tig0019197:-49849 | Msa1371310:CDS |
GCATTCTCAATTTACGAGAC+TGG | 0.461722 | tig0019197:+49074 | None:intergenic |
TAGTTGCAGTTATCAGCAAT+TGG | 0.468844 | tig0019197:-55670 | Msa1371310:CDS |
GTAGCTTCTTTGGATTCAAT+GGG | 0.476127 | tig0019197:-52715 | Msa1371310:CDS |
GCAATCCAATCTGCGAGTTA+GGG | 0.477857 | tig0019197:+56563 | None:intergenic |
CACCTCACAGCAAAATAAGT+TGG | 0.478444 | tig0019197:+48998 | None:intergenic |
AAATAGAAGACAACTCTAAA+CGG | 0.479369 | tig0019197:+56340 | None:intergenic |
GCTGGTCGGCTTCAAACATA+TGG | 0.480453 | tig0019197:-51558 | Msa1371310:CDS |
GCCACAGCATTGAGTTTGCT+GGG | 0.483694 | tig0019197:-49383 | Msa1371310:CDS |
CTAGGATACCGAAAGCAAAC+TGG | 0.484097 | tig0019197:+50192 | None:intergenic |
TTAGGGTTTGGGAATGGAAA+GGG | 0.485075 | tig0019197:+56580 | None:intergenic |
AAGGGAAGAATTCTTGTTGA+AGG | 0.485127 | tig0019197:-49935 | Msa1371310:CDS |
AGTTTGCTTTCGGTATCCTA+GGG | 0.492401 | tig0019197:-50190 | Msa1371310:CDS |
TCTGATTTGTTAGACAATGC+TGG | 0.494059 | tig0019197:-51576 | Msa1371310:CDS |
TGTCATTACAAGTGCAGGAT+TGG | 0.494629 | tig0019197:-50355 | Msa1371310:CDS |
AGCAATTGGACAACTATGTC+TGG | 0.495383 | tig0019197:-55656 | Msa1371310:CDS |
GCCTCAGAAGCTCGATGTCA+AGG | 0.495419 | tig0019197:+49795 | None:intergenic |
AACATATGGTGATTGCTTTG+TGG | 0.497898 | tig0019197:-51544 | Msa1371310:CDS |
AGGATAGAGCTTCACGAGTA+CGG | 0.499924 | tig0019197:+49360 | None:intergenic |
CAGTTGCAAGGGATATTAAA+GGG | 0.501421 | tig0019197:-55706 | Msa1371310:CDS |
TGAATATGCTCGTGGTATGA+TGG | 0.502051 | tig0019197:-52836 | Msa1371310:CDS |
GGTCAATTTGTCGTCTCATA+CGG | 0.503022 | tig0019197:-56705 | Msa1371310:five_prime_UTR |
CAACGGTAATTAGAAAAGAA+TGG | 0.504355 | tig0019197:+49759 | None:intergenic |
AAGAGAACCAAGAATGCAAA+AGG | 0.509689 | tig0019197:-49282 | Msa1371310:three_prime_UTR |
TTGAAGATTTGAGTAATGAT+GGG | 0.518387 | tig0019197:-56633 | Msa1371310:exon |
ATTCATACACAGATTGGAAA+GGG | 0.519161 | tig0019197:-49953 | Msa1371310:intron |
GGATGCAACAGTATATCTGC+TGG | 0.522802 | tig0019197:-55949 | Msa1371310:CDS |
TTCAGGAATGGCAGTTGCAA+GGG | 0.523513 | tig0019197:-55717 | Msa1371310:intron |
TTACTTGGACTCAAATTTGG+TGG | 0.523809 | tig0019197:-55603 | Msa1371310:CDS |
TGCGAGTTAGGGTTTGGGAA+TGG | 0.525876 | tig0019197:+56574 | None:intergenic |
TTTCTAATTACCGTTGAGGA+AGG | 0.526295 | tig0019197:-49752 | Msa1371310:CDS |
CTCTATCTAGTACCCTTAGC+AGG | 0.526339 | tig0019197:-55511 | Msa1371310:CDS |
TTGGACAACTATGTCTGGCC+AGG | 0.526907 | tig0019197:-55651 | Msa1371310:CDS |
AATGGAAAGGGATCACAAAT+GGG | 0.527413 | tig0019197:+56592 | None:intergenic |
CGATATTGTGTCCATCCACT+GGG | 0.527659 | tig0019197:+52764 | None:intergenic |
CGTGGTATGATGGGTCCACC+AGG | 0.528974 | tig0019197:-52826 | Msa1371310:CDS |
GATGCATTTGGTGCAGGTCA+TGG | 0.529726 | tig0019197:-55970 | Msa1371310:CDS |
CTCCAGTTGACAAGATATTG+TGG | 0.529849 | tig0019197:-56239 | Msa1371310:CDS |
TGGTTCTCTTATGCACATCC+CGG | 0.530981 | tig0019197:+49295 | None:intergenic |
ATTACAAGTGCAGGATTGGT+AGG | 0.531830 | tig0019197:-50351 | Msa1371310:CDS |
AAAGGTTCTTCAAGCAAAGA+GGG | 0.533111 | tig0019197:+56397 | None:intergenic |
AATCAACAGCTTAACCAAGC+AGG | 0.533615 | tig0019197:-49428 | Msa1371310:CDS |
CCTCAGAAGCTCGATGTCAA+GGG | 0.536808 | tig0019197:+49796 | None:intergenic |
TTTCAGGAATGGCAGTTGCA+AGG | 0.538184 | tig0019197:-55718 | Msa1371310:intron |
TATGAGGCAATGAGCAATGC+AGG | 0.539433 | tig0019197:-55626 | Msa1371310:CDS |
GTTATAACATGAACCAAGAC+AGG | 0.540223 | tig0019197:+52691 | None:intergenic |
GCATGTTCAATATAACTGTC+TGG | 0.540461 | tig0019197:+49458 | None:intergenic |
TCTAGAAGAAGAAGAATACA+AGG | 0.540511 | tig0019197:+56509 | None:intergenic |
CAGGGTGTTACAAAACGTAT+TGG | 0.541232 | tig0019197:-52892 | Msa1371310:CDS |
TGCTCATTGCCTCATAGACC+TGG | 0.542521 | tig0019197:+55633 | None:intergenic |
CCCTTGACATCGAGCTTCTG+AGG | 0.543920 | tig0019197:-49796 | Msa1371310:CDS |
AACAGTATATCTGCTGGACT+TGG | 0.544844 | tig0019197:-55943 | Msa1371310:intron |
AATGGTTCAGAACTGTCTAA+AGG | 0.546738 | tig0019197:-49882 | Msa1371310:CDS |
GTTGAGGAAGGGTCTATTGG+AGG | 0.546973 | tig0019197:-49740 | Msa1371310:CDS |
ATCAAATGCTCCACACTGGA+GGG | 0.547141 | tig0019197:+50317 | None:intergenic |
CAAATGCACGCTAAATCACT+TGG | 0.547266 | tig0019197:+48893 | None:intergenic |
GAATACGATGCATTTGGTGC+AGG | 0.548872 | tig0019197:-55976 | Msa1371310:CDS |
TTGAACATTGTTCCAAACGA+TGG | 0.549914 | tig0019197:-56828 | None:intergenic |
GAGCAATAAATTGAGCAACA+TGG | 0.551323 | tig0019197:+49708 | None:intergenic |
AGCAATAAATTGAGCAACAT+GGG | 0.552047 | tig0019197:+49709 | None:intergenic |
TCCATAAACAGTTTAAGTGA+CGG | 0.557677 | tig0019197:+51453 | None:intergenic |
AAAGTTTAGAGAAGCTGCTA+AGG | 0.557892 | tig0019197:-55465 | Msa1371310:intron |
GCTTCTGGTTTATCATGTGG+TGG | 0.559580 | tig0019197:-51372 | Msa1371310:CDS |
TATTCATACACAGATTGGAA+AGG | 0.566531 | tig0019197:-49954 | Msa1371310:intron |
GCAGGATTGGTAGGTTCAGA+TGG | 0.569526 | tig0019197:-50342 | Msa1371310:CDS |
GAGCTTGGGTTGTATTACAT+AGG | 0.570421 | tig0019197:-52787 | Msa1371310:CDS |
GAATATGCTCGTGGTATGAT+GGG | 0.571731 | tig0019197:-52835 | Msa1371310:CDS |
TTCTAATTACCGTTGAGGAA+GGG | 0.573324 | tig0019197:-49751 | Msa1371310:CDS |
ATCAACAGCTTAACCAAGCA+GGG | 0.577584 | tig0019197:-49427 | Msa1371310:CDS |
ATACATAACTGACAAGCAGC+AGG | 0.578705 | tig0019197:-52632 | Msa1371310:CDS |
TGATATTGATGATTTCTACT+GGG | 0.582897 | tig0019197:-56457 | Msa1371310:CDS |
AATACAAGGTGATTCTGGAA+AGG | 0.583871 | tig0019197:+56523 | None:intergenic |
CTTGTAATGACAAAACGCAC+TGG | 0.585950 | tig0019197:+50366 | None:intergenic |
TCCAATAGACCCTTCCTCAA+CGG | 0.587245 | tig0019197:+49742 | None:intergenic |
TTTGCTTCTGGTTTATCATG+TGG | 0.587877 | tig0019197:-51375 | Msa1371310:CDS |
ACTGGATTGGAGCCTGCTAA+GGG | 0.588415 | tig0019197:+55499 | None:intergenic |
ACATGATGGAATTCCAATTG+AGG | 0.588705 | tig0019197:-50139 | Msa1371310:intron |
GAAAGGTTCTTCAAGCAAAG+AGG | 0.590345 | tig0019197:+56396 | None:intergenic |
CTCTTATGCACATCCCGGAA+AGG | 0.591436 | tig0019197:+49300 | None:intergenic |
GTTAGGGTTTGGGAATGGAA+AGG | 0.592204 | tig0019197:+56579 | None:intergenic |
AGGTGACTGTTGCTGATGCA+AGG | 0.592702 | tig0019197:-49829 | Msa1371310:CDS |
TATGTCTGGCCAGGTCTATG+AGG | 0.594144 | tig0019197:-55642 | Msa1371310:CDS |
ACAAGTTCAGCCTCATCAGA+TGG | 0.597230 | tig0019197:+50252 | None:intergenic |
AAAGACGAAGCTATACATGA+TGG | 0.597974 | tig0019197:-50153 | Msa1371310:CDS |
ACTGAATCCTAGTATGGCTG+TGG | 0.598944 | tig0019197:-56298 | Msa1371310:CDS |
GAATCCTAGTATGGCTGTGG+TGG | 0.600379 | tig0019197:-56295 | Msa1371310:CDS |
TATTACATAGGCCCAGTGGA+TGG | 0.600676 | tig0019197:-52775 | Msa1371310:CDS |
ATTTGTTAGACAATGCTGGT+CGG | 0.603925 | tig0019197:-51572 | Msa1371310:CDS |
TACAAGGTGATTCTGGAAAG+GGG | 0.607701 | tig0019197:+56525 | None:intergenic |
TATCAAATGCTCCACACTGG+AGG | 0.611958 | tig0019197:+50316 | None:intergenic |
TTCCCAACCAAGGCACCCCT+AGG | 0.612053 | tig0019197:+50174 | None:intergenic |
CTCAGAAGCTCGATGTCAAG+GGG | 0.612883 | tig0019197:+49797 | None:intergenic |
GATGTCCAGTCAACCCTGCT+TGG | 0.614015 | tig0019197:+49414 | None:intergenic |
TCCAGTTGACAAGATATTGT+GGG | 0.614631 | tig0019197:-56238 | Msa1371310:CDS |
TGAGGCTGAACTTGTGCACA+TGG | 0.615311 | tig0019197:-50244 | Msa1371310:CDS |
GTTACAAAACGTATTGGCAG+AGG | 0.616921 | tig0019197:-52886 | Msa1371310:CDS |
TCTTCAAATAGAGTAGAACC+TGG | 0.617072 | tig0019197:+52808 | None:intergenic |
TCAAATGCTCCACACTGGAG+GGG | 0.618009 | tig0019197:+50318 | None:intergenic |
CTTACCAAATATGATTGTCA+TGG | 0.622425 | tig0019197:-50277 | Msa1371310:CDS |
TCAGATGGTCCCCTCCAGTG+TGG | 0.622752 | tig0019197:-50327 | Msa1371310:CDS |
TGAGAAAGACAAAGACATTG+TGG | 0.627386 | tig0019197:-51502 | Msa1371310:CDS |
AGCTTCGTCTTTCCCAACCA+AGG | 0.630651 | tig0019197:+50164 | None:intergenic |
TTTACAGAGAGCCTATGACC+AGG | 0.633765 | tig0019197:-51316 | Msa1371310:intron |
CACATAAGATACTTACAGGA+CGG | 0.634565 | tig0019197:-56065 | Msa1371310:CDS |
TTATATCAAATGCTCCACAC+TGG | 0.640253 | tig0019197:+50313 | None:intergenic |
GCCCAGCAAACTCAATGCTG+TGG | 0.647181 | tig0019197:+49382 | None:intergenic |
AAAGAGTGTCAAATAGAAAG+GGG | 0.648956 | tig0019197:-49156 | Msa1371310:three_prime_UTR |
GACAAGATATTGTGGGATGT+CGG | 0.651340 | tig0019197:-56231 | Msa1371310:CDS |
GTTTGCTTTCGGTATCCTAG+GGG | 0.655988 | tig0019197:-50189 | Msa1371310:CDS |
TCAAATAGAGTAGAACCTGG+TGG | 0.656357 | tig0019197:+52811 | None:intergenic |
ACTGTGTCAAGAATGGGTGT+TGG | 0.665774 | tig0019197:+56426 | None:intergenic |
AAAGTTGATGAATATGCTCG+TGG | 0.672546 | tig0019197:-52844 | Msa1371310:CDS |
TGTCATGGCACCATCTGATG+AGG | 0.674548 | tig0019197:-50262 | Msa1371310:CDS |
ATAACTGACAAGCAGCAGGA+TGG | 0.691219 | tig0019197:-52628 | Msa1371310:intron |
GTTGTATTACATAGGCCCAG+TGG | 0.704282 | tig0019197:-52779 | Msa1371310:CDS |
ACTAGATAGAGCATTGACAG+AGG | 0.707471 | tig0019197:+55523 | None:intergenic |
CATGATGTATTGCAACTGTG+AGG | 0.764353 | tig0019197:+56271 | None:intergenic |
GGCTGAACTTGTGCACATGG+TGG | 0.765179 | tig0019197:-50241 | Msa1371310:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTAAAAATAAATAAATAAAT+CGG | - | tig0019197:52568-52587 | Msa1371310:intron | 0.0% |
!! | TAATATAATGTTATGAAATA+AGG | + | tig0019197:49818-49837 | None:intergenic | 10.0% |
!!! | AAAGTAATGTATATTTTTAA+AGG | + | tig0019197:50762-50781 | None:intergenic | 10.0% |
!!! | TTTTCTATATATACTATATT+AGG | + | tig0019197:52259-52278 | None:intergenic | 10.0% |
!! | ATATAATTAATATTTCCTAT+AGG | - | tig0019197:53969-53988 | Msa1371310:intron | 10.0% |
!!! | ACAATTTAATTTTATAAAGT+GGG | + | tig0019197:54564-54583 | None:intergenic | 10.0% |
!!! | AACAATTTAATTTTATAAAG+TGG | + | tig0019197:54565-54584 | None:intergenic | 10.0% |
!!! | ATGTTTTTTTTTTTAAAGAT+TGG | - | tig0019197:54655-54674 | Msa1371310:intron | 10.0% |
!! | AATAAAAATATAAAAACATG+AGG | + | tig0019197:54959-54978 | None:intergenic | 10.0% |
!! | TATTGCAAATTAAAATAAAA+CGG | + | tig0019197:55185-55204 | None:intergenic | 10.0% |
!!! | ATAACATTATATTAGTTTCT+TGG | - | tig0019197:49824-49843 | Msa1371310:CDS | 15.0% |
!!! | CATTTTGAAACAATTTTTTT+TGG | + | tig0019197:50515-50534 | None:intergenic | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | + | tig0019197:50618-50637 | None:intergenic | 15.0% |
!! | AAATTATCCTTATTAACTAT+TGG | + | tig0019197:50642-50661 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | - | tig0019197:50641-50660 | Msa1371310:intron | 15.0% |
!! | AATTGAATTAAAATTTGAGA+AGG | - | tig0019197:51280-51299 | Msa1371310:intron | 15.0% |
!! | TATAAATGTCAATTCAATTT+CGG | + | tig0019197:51863-51882 | None:intergenic | 15.0% |
!!! | TTATTTTGAATGATAAAACA+TGG | + | tig0019197:52722-52741 | None:intergenic | 15.0% |
!!! | ATTTTGTTACATGTTTAAAA+TGG | - | tig0019197:53268-53287 | Msa1371310:intron | 15.0% |
!!! | TAAATGGTTTTACTAAAATT+TGG | + | tig0019197:53794-53813 | None:intergenic | 15.0% |
!!! | TTCAAATTTTCAAAATAATG+AGG | + | tig0019197:54056-54075 | None:intergenic | 15.0% |
!!! | AATTTAATTTTATAAAGTGG+GGG | + | tig0019197:54562-54581 | None:intergenic | 15.0% |
!!! | CAATTTAATTTTATAAAGTG+GGG | + | tig0019197:54563-54582 | None:intergenic | 15.0% |
!!! | TCTTTTGCTAAAAAAAAAAT+AGG | - | tig0019197:54598-54617 | Msa1371310:intron | 15.0% |
!! | AAAAGTTAATTTATACAAGA+GGG | + | tig0019197:54626-54645 | None:intergenic | 15.0% |
!! | TAAAAGTTAATTTATACAAG+AGG | + | tig0019197:54627-54646 | None:intergenic | 15.0% |
!! | GAACTAAAAAAAATTATTAG+AGG | + | tig0019197:55005-55024 | None:intergenic | 15.0% |
!!! | TGCAATTTTCTTTTAATTAA+AGG | + | tig0019197:56769-56788 | None:intergenic | 15.0% |
!! | AAGACAATAAGAAAAAAGAA+TGG | - | tig0019197:49688-49707 | Msa1371310:CDS | 20.0% |
!! | TGAACTGATGAAATTATTAT+AGG | - | tig0019197:49935-49954 | Msa1371310:CDS | 20.0% |
!! | AGAAAAAGTTATTATTGCAT+TGG | + | tig0019197:50555-50574 | None:intergenic | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | - | tig0019197:50632-50651 | Msa1371310:intron | 20.0% |
!! | AAATGCAATGATTAAAAGAA+TGG | + | tig0019197:50675-50694 | None:intergenic | 20.0% |
!! | GGTTAAAGAAATAAAAAGAA+GGG | + | tig0019197:50870-50889 | None:intergenic | 20.0% |
!! | AGGTTAAAGAAATAAAAAGA+AGG | + | tig0019197:50871-50890 | None:intergenic | 20.0% |
!! | CAATTTCAAAAATTGATAAG+AGG | - | tig0019197:51232-51251 | Msa1371310:intron | 20.0% |
!! | GTAAAAGGAATAAAAAATAG+AGG | - | tig0019197:51480-51499 | Msa1371310:CDS | 20.0% |
!!! | GGATCTTGATTAAATTTTTA+GGG | - | tig0019197:51971-51990 | Msa1371310:intron | 20.0% |
!!! | GATCTTGATTAAATTTTTAG+GGG | - | tig0019197:51972-51991 | Msa1371310:intron | 20.0% |
!! | ACCATGAAATATATATGAAA+CGG | - | tig0019197:52004-52023 | Msa1371310:intron | 20.0% |
!! | AAATAGAAAAAATCATTACC+TGG | - | tig0019197:52034-52053 | Msa1371310:intron | 20.0% |
!! | ATTCAAAAAAACATGTTTGT+GGG | + | tig0019197:52110-52129 | None:intergenic | 20.0% |
!! | TATTCAAAAAAACATGTTTG+TGG | + | tig0019197:52111-52130 | None:intergenic | 20.0% |
!! | AGAAATATGTAAAAAGAAGA+TGG | - | tig0019197:52150-52169 | Msa1371310:intron | 20.0% |
!! | ATAGTATATATAGAAAACCT+AGG | - | tig0019197:52262-52281 | Msa1371310:intron | 20.0% |
!! | TAGTATATATAGAAAACCTA+GGG | - | tig0019197:52263-52282 | Msa1371310:intron | 20.0% |
!! | AAATTCACTGTATCTATTAA+AGG | - | tig0019197:52387-52406 | Msa1371310:intron | 20.0% |
!! | TAATAATGATGATCCTTATT+TGG | - | tig0019197:52759-52778 | Msa1371310:CDS | 20.0% |
!! | ATAAAATGAGATTACAGTTT+AGG | - | tig0019197:53200-53219 | Msa1371310:intron | 20.0% |
!!! | ATAGAGGAAAATGAATATTT+TGG | + | tig0019197:53393-53412 | None:intergenic | 20.0% |
!! | ATAAACATTACACAGTAAAA+AGG | - | tig0019197:53437-53456 | Msa1371310:intron | 20.0% |
!! | GTATCATGATTATTATTGTT+TGG | + | tig0019197:53511-53530 | None:intergenic | 20.0% |
!! | TAATCAATAAATGAAGTGAT+TGG | + | tig0019197:53657-53676 | None:intergenic | 20.0% |
!!! | AAAATTTGGTGTTTTGATAA+TGG | + | tig0019197:53780-53799 | None:intergenic | 20.0% |
!! | AATCTCAGTAAATTAAATGA+GGG | + | tig0019197:54703-54722 | None:intergenic | 20.0% |
!! | AAATCTCAGTAAATTAAATG+AGG | + | tig0019197:54704-54723 | None:intergenic | 20.0% |
!!! | TCCTTTTTTAGTTAAAATGA+AGG | - | tig0019197:54775-54794 | Msa1371310:intron | 20.0% |
!!! | TCCTTCATTTTAACTAAAAA+AGG | + | tig0019197:54779-54798 | None:intergenic | 20.0% |
!! | CTAAAAAAAATTATTAGAGG+AGG | + | tig0019197:55002-55021 | None:intergenic | 20.0% |
!! | TAAAAAAATCCTCCAAATTT+GGG | + | tig0019197:55029-55048 | None:intergenic | 20.0% |
!! | TAATTTATTCATACACAGAT+TGG | - | tig0019197:55759-55778 | Msa1371310:intron | 20.0% |
!! | AACTAATTACCTTAATTCTT+CGG | + | tig0019197:56052-56071 | None:intergenic | 20.0% |
!! | TTTATGCTTTCAAGAATATT+TGG | - | tig0019197:56096-56115 | Msa1371310:intron | 20.0% |
!! | TTATGCTTTCAAGAATATTT+GGG | - | tig0019197:56097-56116 | Msa1371310:intron | 20.0% |
!!! | AAATTTTGTTTTTCTTGTGT+TGG | - | tig0019197:56175-56194 | Msa1371310:intron | 20.0% |
!!! | TCTTTTCTGTACAATTAAAA+TGG | + | tig0019197:56547-56566 | None:intergenic | 20.0% |
! | TTTGAAGATTTGAGTAATGA+TGG | - | tig0019197:49084-49103 | Msa1371310:three_prime_UTR | 25.0% |
! | TTGAAGATTTGAGTAATGAT+GGG | - | tig0019197:49085-49104 | Msa1371310:three_prime_UTR | 25.0% |
!! | TGATATTGATGATTTCTACT+GGG | - | tig0019197:49261-49280 | Msa1371310:three_prime_UTR | 25.0% |
! | AAATAGAAGACAACTCTAAA+CGG | + | tig0019197:49381-49400 | None:intergenic | 25.0% |
! | AATATTACTGAATCCTAGTA+TGG | - | tig0019197:49414-49433 | Msa1371310:CDS | 25.0% |
! | TTTCATCAGTTCATTTAAGA+AGG | + | tig0019197:49928-49947 | None:intergenic | 25.0% |
!!! | TATGGAGTATATTTTGTTTC+AGG | - | tig0019197:49984-50003 | Msa1371310:intron | 25.0% |
!!! | AGTATATTTTGTTTCAGGAA+TGG | - | tig0019197:49989-50008 | Msa1371310:intron | 25.0% |
!! | TCATTTAAAGTTGAATGATG+TGG | + | tig0019197:50382-50401 | None:intergenic | 25.0% |
!!! | CTTTCCATTTTGATTTAATG+TGG | - | tig0019197:50778-50797 | Msa1371310:intron | 25.0% |
! | TTCTCCACATTAAATCAAAA+TGG | + | tig0019197:50785-50804 | None:intergenic | 25.0% |
! | AAAAAAAATATGGAGGAAGA+TGG | + | tig0019197:50955-50974 | None:intergenic | 25.0% |
! | ACATCGGCAAAAAAAAAATA+TGG | + | tig0019197:50965-50984 | None:intergenic | 25.0% |
! | AATTGAAGCAAATCAGAAAT+GGG | + | tig0019197:51053-51072 | None:intergenic | 25.0% |
! | AAATTGAAGCAAATCAGAAA+TGG | + | tig0019197:51054-51073 | None:intergenic | 25.0% |
!! | ATTTTTCATGGATTCAATGA+AGG | + | tig0019197:51123-51142 | None:intergenic | 25.0% |
! | AACATGTATATTGGAATCAT+GGG | + | tig0019197:51167-51186 | None:intergenic | 25.0% |
! | AAACATGTATATTGGAATCA+TGG | + | tig0019197:51168-51187 | None:intergenic | 25.0% |
! | ATGAAAGAAAAAGATGAATC+TGG | + | tig0019197:51208-51227 | None:intergenic | 25.0% |
! | TGAATTAAAATTTGAGAAGG+AGG | - | tig0019197:51283-51302 | Msa1371310:intron | 25.0% |
! | GAATTAAAATTTGAGAAGGA+GGG | - | tig0019197:51284-51303 | Msa1371310:intron | 25.0% |
! | AATAAAAAATAGAGGTGATG+TGG | - | tig0019197:51488-51507 | Msa1371310:CDS | 25.0% |
!! | ACGTTAACTACAATTTCTTT+TGG | + | tig0019197:51908-51927 | None:intergenic | 25.0% |
!! | CGGATCTTGATTAAATTTTT+AGG | - | tig0019197:51970-51989 | Msa1371310:intron | 25.0% |
! | ATATATATTTCATGGTGGTT+TGG | + | tig0019197:52000-52019 | None:intergenic | 25.0% |
! | GTTTCATATATATTTCATGG+TGG | + | tig0019197:52005-52024 | None:intergenic | 25.0% |
! | ACCGTTTCATATATATTTCA+TGG | + | tig0019197:52008-52027 | None:intergenic | 25.0% |
! | AATATATATGAAACGGTTTC+AGG | - | tig0019197:52011-52030 | Msa1371310:intron | 25.0% |
! | TTCAAAAAAACATGTTTGTG+GGG | + | tig0019197:52109-52128 | None:intergenic | 25.0% |
! | AGTATATATAGAAAACCTAG+GGG | - | tig0019197:52264-52283 | Msa1371310:intron | 25.0% |
!! | TTTAATTGATAGTTGATCAG+TGG | + | tig0019197:52325-52344 | None:intergenic | 25.0% |
! | TGTTATAACTGATGAAAATC+AGG | - | tig0019197:53041-53060 | Msa1371310:intron | 25.0% |
!!! | TACTGATTTAGTTAAAAACG+AGG | - | tig0019197:53227-53246 | Msa1371310:intron | 25.0% |
! | TAGACAATACAAACAATGTA+AGG | + | tig0019197:53481-53500 | None:intergenic | 25.0% |
! | TCATGATTATTATTGTTTGG+TGG | + | tig0019197:53508-53527 | None:intergenic | 25.0% |
! | GAGTAAACTATATGGATAAA+TGG | - | tig0019197:53751-53770 | Msa1371310:intron | 25.0% |
! | TTTAGTAAAACCATTTACAC+TGG | - | tig0019197:53797-53816 | Msa1371310:intron | 25.0% |
! | TTAGTAAAACCATTTACACT+GGG | - | tig0019197:53798-53817 | Msa1371310:intron | 25.0% |
! | TAAAAAATACCCAGTGTAAA+TGG | + | tig0019197:53810-53829 | None:intergenic | 25.0% |
!!! | TTTACACTGGGTATTTTTTA+AGG | - | tig0019197:53810-53829 | Msa1371310:intron | 25.0% |
!! | TTTTCTCTCAATGTTTTCTT+AGG | - | tig0019197:53833-53852 | Msa1371310:intron | 25.0% |
!! | GTATGTTAACTTTTCAGAAT+TGG | - | tig0019197:54114-54133 | Msa1371310:intron | 25.0% |
! | TTATGGAAAAATTTCCAGAT+AGG | - | tig0019197:54281-54300 | Msa1371310:intron | 25.0% |
! | ATCTCAGTAAATTAAATGAG+GGG | + | tig0019197:54702-54721 | None:intergenic | 25.0% |
!!! | TCCCTTTTTAAGTTTGTTTT+AGG | - | tig0019197:54731-54750 | Msa1371310:intron | 25.0% |
! | GCCTAAAACAAACTTAAAAA+GGG | + | tig0019197:54735-54754 | None:intergenic | 25.0% |
!! | TTTTAGGCCTAGATATATAT+CGG | - | tig0019197:54747-54766 | Msa1371310:intron | 25.0% |
! | ATTGTACTTTATGAACCTTA+AGG | - | tig0019197:54852-54871 | Msa1371310:intron | 25.0% |
! | AAAAAAATCCTCCAAATTTG+GGG | + | tig0019197:55028-55047 | None:intergenic | 25.0% |
! | GTAAAAAAATCCTCCAAATT+TGG | + | tig0019197:55030-55049 | None:intergenic | 25.0% |
! | ACTTTCATGAGAAAGTAATT+AGG | - | tig0019197:55141-55160 | Msa1371310:intron | 25.0% |
!!! | TTAATTTGCAATATGTGAGT+TGG | - | tig0019197:55192-55211 | Msa1371310:intron | 25.0% |
! | TAACACCTATTACTTTGTAA+AGG | - | tig0019197:55643-55662 | Msa1371310:CDS | 25.0% |
! | AACACCTATTACTTTGTAAA+GGG | - | tig0019197:55644-55663 | Msa1371310:CDS | 25.0% |
! | TTTACCCTTTACAAAGTAAT+AGG | + | tig0019197:55651-55670 | None:intergenic | 25.0% |
! | TACGATACTATGACAATATT+GGG | + | tig0019197:55711-55730 | None:intergenic | 25.0% |
! | ATACGATACTATGACAATAT+TGG | + | tig0019197:55712-55731 | None:intergenic | 25.0% |
!! | TATTCTTGAAAGCATAAAAC+AGG | + | tig0019197:56094-56113 | None:intergenic | 25.0% |
!!! | GGGTTTTATGAATGTATTAT+TGG | - | tig0019197:56117-56136 | Msa1371310:intron | 25.0% |
!!! | AAAAGAGTGTCAAATAGAAA+GGG | - | tig0019197:56561-56580 | Msa1371310:CDS | 25.0% |
! | AAAGAAAATTGCAAGTGTTA+AGG | - | tig0019197:56776-56795 | Msa1371310:five_prime_UTR | 25.0% |
TTGGTTCACAAAAAAACCAA+AGG | + | tig0019197:48942-48961 | None:intergenic | 30.0% | |
! | CGTTTTCTAACAATTCGTAT+TGG | - | tig0019197:49046-49065 | Msa1371310:three_prime_UTR | 30.0% |
TCTAGAAGAAGAAGAATACA+AGG | + | tig0019197:49212-49231 | None:intergenic | 30.0% | |
CAGTAGAAATCATCAATATC+AGG | + | tig0019197:49262-49281 | None:intergenic | 30.0% | |
! | CTGATATTGATGATTTCTAC+TGG | - | tig0019197:49260-49279 | Msa1371310:three_prime_UTR | 30.0% |
! | TTTTGAACTGTGTCAAGAAT+GGG | + | tig0019197:49301-49320 | None:intergenic | 30.0% |
! | AGAGTTGTCTTCTATTTTGT+CGG | - | tig0019197:49384-49403 | Msa1371310:CDS | 30.0% |
! | CAAAATTTGAAATGAGAAGC+AGG | + | tig0019197:49530-49549 | None:intergenic | 30.0% |
CAGACAAATAACAAACAAGT+TGG | + | tig0019197:49623-49642 | None:intergenic | 30.0% | |
TATGCACATAAGATACTTAC+AGG | - | tig0019197:49649-49668 | Msa1371310:intron | 30.0% | |
AGAAAAAAGAATGGTCTTTC+TGG | - | tig0019197:49697-49716 | Msa1371310:CDS | 30.0% | |
CAAATGTTCTCAAAGTCATA+TGG | - | tig0019197:49966-49985 | Msa1371310:intron | 30.0% | |
AAACTTTCGGAAAGATTTAC+TGG | + | tig0019197:50240-50259 | None:intergenic | 30.0% | |
!! | AAGCAACACTCATTTTGAAA+CGG | + | tig0019197:50489-50508 | None:intergenic | 30.0% |
!!! | TTCAAAATGAGTGTCGTTTT+AGG | + | tig0019197:50717-50736 | None:intergenic | 30.0% |
!! | AAACGACACTCATTTTGAAA+CGG | - | tig0019197:50718-50737 | Msa1371310:intron | 30.0% |
ATTTAATGTGGAGAATTGCT+AGG | - | tig0019197:50790-50809 | Msa1371310:intron | 30.0% | |
TTTAATGTGGAGAATTGCTA+GGG | - | tig0019197:50791-50810 | Msa1371310:intron | 30.0% | |
! | AGTGTGTTAAAAGTGTGTTA+GGG | + | tig0019197:50824-50843 | None:intergenic | 30.0% |
!!! | ATGATGTGGCTAGTTTTTAT+TGG | + | tig0019197:50847-50866 | None:intergenic | 30.0% |
AATAAAAAGAAGGGATGATG+TGG | + | tig0019197:50861-50880 | None:intergenic | 30.0% | |
! | TTATTTCTTTAACCTGCAAC+CGG | - | tig0019197:50876-50895 | Msa1371310:intron | 30.0% |
!! | AAGTACTTTGTTGTTTGTAC+CGG | + | tig0019197:50898-50917 | None:intergenic | 30.0% |
TCGGCAAAAAAAAAATATGG+AGG | + | tig0019197:50962-50981 | None:intergenic | 30.0% | |
!!! | TTTTTTTTTGCCGATGTCTA+TGG | - | tig0019197:50968-50987 | Msa1371310:intron | 30.0% |
TTCTCCTCCTTCAAAAATAA+CGG | - | tig0019197:51011-51030 | Msa1371310:intron | 30.0% | |
!! | TTCTGATTTGCTTCAATTTG+TGG | - | tig0019197:51055-51074 | Msa1371310:intron | 30.0% |
!! | GAGCATTGAAACATGTATAT+TGG | + | tig0019197:51176-51195 | None:intergenic | 30.0% |
! | TTATTCCTTTTACCTGTTAC+AGG | + | tig0019197:51473-51492 | None:intergenic | 30.0% |
!! | GTGATGTGGCTAATTTTAAT+TGG | - | tig0019197:51502-51521 | Msa1371310:CDS | 30.0% |
CACATTAAAGAGAAATGCTA+GGG | + | tig0019197:51560-51579 | None:intergenic | 30.0% | |
TCACATTAAAGAGAAATGCT+AGG | + | tig0019197:51561-51580 | None:intergenic | 30.0% | |
!! | AACCAAGCATTTCTGTTTTT+GGG | + | tig0019197:51643-51662 | None:intergenic | 30.0% |
GTAGTTAACGTACAATTGAA+CGG | - | tig0019197:51917-51936 | Msa1371310:intron | 30.0% | |
TAGTTAACGTACAATTGAAC+GGG | - | tig0019197:51918-51937 | Msa1371310:intron | 30.0% | |
GTTAAATGTATCAACTACAG+TGG | - | tig0019197:51947-51966 | Msa1371310:intron | 30.0% | |
TTCAAACAAGTTAAACCACT+AGG | + | tig0019197:52060-52079 | None:intergenic | 30.0% | |
TCTATTAAAGGAATGAGAAG+AGG | - | tig0019197:52399-52418 | Msa1371310:intron | 30.0% | |
! | TTCATGGGTTGTATATCTTA+AGG | - | tig0019197:52676-52695 | Msa1371310:CDS | 30.0% |
! | TCATGGGTTGTATATCTTAA+GGG | - | tig0019197:52677-52696 | Msa1371310:CDS | 30.0% |
CAACAAGAAATAGCACATAA+TGG | + | tig0019197:53160-53179 | None:intergenic | 30.0% | |
!! | TGCTATTTCTTGTTGTAGAA+TGG | - | tig0019197:53165-53184 | Msa1371310:intron | 30.0% |
ATAGAACAAATGTAGAAGTG+TGG | - | tig0019197:53298-53317 | Msa1371310:intron | 30.0% | |
AAACATTGCAACACATATAG+AGG | + | tig0019197:53409-53428 | None:intergenic | 30.0% | |
ATGAAACAAATTCAACAAGG+GGG | + | tig0019197:53610-53629 | None:intergenic | 30.0% | |
CATGAAACAAATTCAACAAG+GGG | + | tig0019197:53611-53630 | None:intergenic | 30.0% | |
GCATGAAACAAATTCAACAA+GGG | + | tig0019197:53612-53631 | None:intergenic | 30.0% | |
AGCATGAAACAAATTCAACA+AGG | + | tig0019197:53613-53632 | None:intergenic | 30.0% | |
!!! | GATTGGTTTCATTTTCTGAA+AGG | + | tig0019197:53640-53659 | None:intergenic | 30.0% |
AGAGTTAGAGTTTATCTGTA+AGG | + | tig0019197:53680-53699 | None:intergenic | 30.0% | |
GCTTGGGAAGAATATTTAAA+TGG | + | tig0019197:53870-53889 | None:intergenic | 30.0% | |
AAACCAACACTGCATTTATT+TGG | - | tig0019197:53924-53943 | Msa1371310:intron | 30.0% | |
GAAACTAAGCTATAATTTCC+TGG | + | tig0019197:54018-54037 | None:intergenic | 30.0% | |
TTTCCCAATCACTTTCTAAT+TGG | - | tig0019197:54087-54106 | Msa1371310:intron | 30.0% | |
CAACCAATTAGAAAGTGATT+GGG | + | tig0019197:54093-54112 | None:intergenic | 30.0% | |
ACAACCAATTAGAAAGTGAT+TGG | + | tig0019197:54094-54113 | None:intergenic | 30.0% | |
TCCATAAACAGTTTAAGTGA+CGG | + | tig0019197:54268-54287 | None:intergenic | 30.0% | |
! | TCCAGATAGGATTTTTAATG+TGG | - | tig0019197:54294-54313 | Msa1371310:intron | 30.0% |
! | CCAGATAGGATTTTTAATGT+GGG | - | tig0019197:54295-54314 | Msa1371310:intron | 30.0% |
! | GAAGAAGGTATAATGCAAAA+TGG | + | tig0019197:54379-54398 | None:intergenic | 30.0% |
TCATGATAACCACTATATGT+AGG | - | tig0019197:54450-54469 | Msa1371310:intron | 30.0% | |
GGTCTTTACTAGGAAATAAA+AGG | + | tig0019197:54681-54700 | None:intergenic | 30.0% | |
GGCCTAAAACAAACTTAAAA+AGG | + | tig0019197:54736-54755 | None:intergenic | 30.0% | |
TTTAGGCCTAGATATATATC+GGG | - | tig0019197:54748-54767 | Msa1371310:intron | 30.0% | |
! | TATTAGAGGAGGATTTTAGA+GGG | + | tig0019197:54991-55010 | None:intergenic | 30.0% |
! | TTATTAGAGGAGGATTTTAG+AGG | + | tig0019197:54992-55011 | None:intergenic | 30.0% |
!!! | TTTTTTAGTTCCCCCAAATT+TGG | - | tig0019197:55014-55033 | Msa1371310:intron | 30.0% |
AAAAAATCCTCCAAATTTGG+GGG | + | tig0019197:55027-55046 | None:intergenic | 30.0% | |
AACTCTTGCACATTACATAA+TGG | - | tig0019197:55256-55275 | Msa1371310:intron | 30.0% | |
CTTACCAAATATGATTGTCA+TGG | - | tig0019197:55441-55460 | Msa1371310:intron | 30.0% | |
ACGATACTATGACAATATTG+GGG | + | tig0019197:55710-55729 | None:intergenic | 30.0% | |
TATTCATACACAGATTGGAA+AGG | - | tig0019197:55764-55783 | Msa1371310:intron | 30.0% | |
ATTCATACACAGATTGGAAA+GGG | - | tig0019197:55765-55784 | Msa1371310:intron | 30.0% | |
CAACGGTAATTAGAAAAGAA+TGG | + | tig0019197:55962-55981 | None:intergenic | 30.0% | |
! | TTCTTTTCTAATTACCGTTG+AGG | - | tig0019197:55962-55981 | Msa1371310:CDS | 30.0% |
AGCAATAAATTGAGCAACAT+GGG | + | tig0019197:56012-56031 | None:intergenic | 30.0% | |
! | TAATTAGTTTAAGCGTGAGA+AGG | - | tig0019197:56063-56082 | Msa1371310:CDS | 30.0% |
!! | AACAAAATTTAGTCTTGCCT+TGG | + | tig0019197:56165-56184 | None:intergenic | 30.0% |
TAACTGTCTGGTAAAACAAT+TGG | + | tig0019197:56251-56270 | None:intergenic | 30.0% | |
CACAATTCACAAACACATAA+AGG | + | tig0019197:56381-56400 | None:intergenic | 30.0% | |
! | AATAAAGCCTTTTGCATTCT+TGG | + | tig0019197:56446-56465 | None:intergenic | 30.0% |
!! | AGAATGCAAAAGGCTTTATT+AGG | - | tig0019197:56446-56465 | Msa1371310:CDS | 30.0% |
!! | GAAAAGAGTGTCAAATAGAA+AGG | - | tig0019197:56560-56579 | Msa1371310:CDS | 30.0% |
!! | AAAGAGTGTCAAATAGAAAG+GGG | - | tig0019197:56562-56581 | Msa1371310:CDS | 30.0% |
!!! | AGAATGCAATACTTGTTTTG+AGG | - | tig0019197:56660-56679 | Msa1371310:five_prime_UTR | 30.0% |
ATGCTAACATGGGTATAATA+TGG | - | tig0019197:56683-56702 | Msa1371310:five_prime_UTR | 30.0% | |
GAAAGAACATTTCCATCGTT+TGG | + | tig0019197:48905-48924 | None:intergenic | 35.0% | |
ACTTTCGTTAACACTGTGTT+TGG | + | tig0019197:48961-48980 | None:intergenic | 35.0% | |
CGAGTGATCAAAACAGATTA+TGG | - | tig0019197:48992-49011 | Msa1371310:three_prime_UTR | 35.0% | |
AATGGAAAGGGATCACAAAT+GGG | + | tig0019197:49129-49148 | None:intergenic | 35.0% | |
! | ATACAAGGTGATTCTGGAAA+GGG | + | tig0019197:49197-49216 | None:intergenic | 35.0% |
! | AATACAAGGTGATTCTGGAA+AGG | + | tig0019197:49198-49217 | None:intergenic | 35.0% |
AGAAGAATACAAGGTGATTC+TGG | + | tig0019197:49203-49222 | None:intergenic | 35.0% | |
!! | GTTTTGAACTGTGTCAAGAA+TGG | + | tig0019197:49302-49321 | None:intergenic | 35.0% |
AAAGGTTCTTCAAGCAAAGA+GGG | + | tig0019197:49324-49343 | None:intergenic | 35.0% | |
! | GAGTTGTCTTCTATTTTGTC+GGG | - | tig0019197:49385-49404 | Msa1371310:CDS | 35.0% |
TCCAGTTGACAAGATATTGT+GGG | - | tig0019197:49480-49499 | Msa1371310:intron | 35.0% | |
! | TCAAATTTTGCCCTTTGTAG+TGG | - | tig0019197:49540-49559 | Msa1371310:intron | 35.0% |
GCATAACTTTCCACTACAAA+GGG | + | tig0019197:49553-49572 | None:intergenic | 35.0% | |
TGCATAACTTTCCACTACAA+AGG | + | tig0019197:49554-49573 | None:intergenic | 35.0% | |
CACATAAGATACTTACAGGA+CGG | - | tig0019197:49653-49672 | Msa1371310:intron | 35.0% | |
ATGTTCCGATCATATGTATG+TGG | - | tig0019197:49877-49896 | Msa1371310:CDS | 35.0% | |
TGTTCCGATCATATGTATGT+GGG | - | tig0019197:49878-49897 | Msa1371310:CDS | 35.0% | |
TCAACCCACATACATATGAT+CGG | + | tig0019197:49885-49904 | None:intergenic | 35.0% | |
CAGTTGCAAGGGATATTAAA+GGG | - | tig0019197:50012-50031 | Msa1371310:intron | 35.0% | |
TAGTTGCAGTTATCAGCAAT+TGG | - | tig0019197:50048-50067 | Msa1371310:intron | 35.0% | |
AGGTTACTTGGACTCAAATT+TGG | - | tig0019197:50112-50131 | Msa1371310:intron | 35.0% | |
TTACTTGGACTCAAATTTGG+TGG | - | tig0019197:50115-50134 | Msa1371310:intron | 35.0% | |
!! | CAATTTTTGGGAGTAAAGAG+TGG | + | tig0019197:50160-50179 | None:intergenic | 35.0% |
CTCTTTACTCCCAAAAATTG+AGG | - | tig0019197:50160-50179 | Msa1371310:CDS | 35.0% | |
TTTACTCCCAAAAATTGAGG+AGG | - | tig0019197:50163-50182 | Msa1371310:CDS | 35.0% | |
TTACTCCCAAAAATTGAGGA+GGG | - | tig0019197:50164-50183 | Msa1371310:CDS | 35.0% | |
TTCGGAAAGATTTACTGGAT+TGG | + | tig0019197:50235-50254 | None:intergenic | 35.0% | |
TAGCAGCTTCTCTAAACTTT+CGG | + | tig0019197:50253-50272 | None:intergenic | 35.0% | |
AAAGTTTAGAGAAGCTGCTA+AGG | - | tig0019197:50253-50272 | Msa1371310:CDS | 35.0% | |
! | ATCTTGCATTTTCTCTGCAA+AGG | + | tig0019197:50297-50316 | None:intergenic | 35.0% |
GTTGTTAGCAATAGCATACA+TGG | - | tig0019197:50342-50361 | Msa1371310:CDS | 35.0% | |
TGCTAAGTAAGCACTTCAAA+AGG | - | tig0019197:50427-50446 | Msa1371310:intron | 35.0% | |
GCTAAGTAAGCACTTCAAAA+GGG | - | tig0019197:50428-50447 | Msa1371310:intron | 35.0% | |
! | TGTGCAGAGTATTAATTGGA+GGG | + | tig0019197:50589-50608 | None:intergenic | 35.0% |
! | GTAGTGTGCAGAGTATTAAT+TGG | + | tig0019197:50593-50612 | None:intergenic | 35.0% |
! | AACGGAGAGAGTAACTTTTA+AGG | - | tig0019197:50736-50755 | Msa1371310:intron | 35.0% |
! | GAGTGTGTTAAAAGTGTGTT+AGG | + | tig0019197:50825-50844 | None:intergenic | 35.0% |
!!! | TATGGTGCCGTTATTTTTGA+AGG | + | tig0019197:51021-51040 | None:intergenic | 35.0% |
TCTTGAAAAGGGATGTACAA+GGG | + | tig0019197:51082-51101 | None:intergenic | 35.0% | |
TTCTTGAAAAGGGATGTACA+AGG | + | tig0019197:51083-51102 | None:intergenic | 35.0% | |
CAATGAAGGAAATATCAGCA+CGG | + | tig0019197:51109-51128 | None:intergenic | 35.0% | |
AAATGTCACCATCCTCAATT+TGG | - | tig0019197:51139-51158 | Msa1371310:intron | 35.0% | |
AAAAGATGAATCTGGTGTGA+AGG | + | tig0019197:51200-51219 | None:intergenic | 35.0% | |
ATTGAAATTGAGAGGGAGAA+TGG | - | tig0019197:51308-51327 | Msa1371310:intron | 35.0% | |
TTGAAATTGAGAGGGAGAAT+GGG | - | tig0019197:51309-51328 | Msa1371310:intron | 35.0% | |
AATGGAAATGGAACGATGAA+AGG | - | tig0019197:51337-51356 | Msa1371310:CDS | 35.0% | |
TAGAGATTGTCACAGTAGAA+AGG | - | tig0019197:51393-51412 | Msa1371310:CDS | 35.0% | |
AGAGATTGTCACAGTAGAAA+GGG | - | tig0019197:51394-51413 | Msa1371310:CDS | 35.0% | |
!! | TGTGAAAAGAGAGTGTTAGA+GGG | - | tig0019197:51529-51548 | Msa1371310:CDS | 35.0% |
!!! | ACCAAGCATTTCTGTTTTTG+GGG | + | tig0019197:51642-51661 | None:intergenic | 35.0% |
! | CAACCAAGCATTTCTGTTTT+TGG | + | tig0019197:51644-51663 | None:intergenic | 35.0% |
TGGTTGTATACAATGAAGCA+TGG | - | tig0019197:51658-51677 | Msa1371310:intron | 35.0% | |
CGTCGTTCATTGAAAAACAT+AGG | - | tig0019197:51726-51745 | Msa1371310:intron | 35.0% | |
AAATGTATCAACTACAGTGG+CGG | - | tig0019197:51950-51969 | Msa1371310:intron | 35.0% | |
!! | TAACTTGTTTGAAAGCAGCA+AGG | - | tig0019197:52067-52086 | Msa1371310:intron | 35.0% |
! | AACTTGTTTGAAAGCAGCAA+GGG | - | tig0019197:52068-52087 | Msa1371310:intron | 35.0% |
GTAGTCTAAAAATCTCCCAA+TGG | + | tig0019197:52196-52215 | None:intergenic | 35.0% | |
! | AATTGATAGTTGATCAGTGG+CGG | + | tig0019197:52322-52341 | None:intergenic | 35.0% |
GAATGAGAAGAGGTAACTAA+AGG | - | tig0019197:52409-52428 | Msa1371310:intron | 35.0% | |
!!! | AGGAGGGGAAAGTTTTTTAT+TGG | - | tig0019197:52447-52466 | Msa1371310:intron | 35.0% |
!!! | TGGTAGCTATTTTGACGTAT+CGG | - | tig0019197:52650-52669 | Msa1371310:CDS | 35.0% |
GATCATTACGATATAGAGAC+TGG | + | tig0019197:52788-52807 | None:intergenic | 35.0% | |
!! | AAAGTTGATGAATATGCTCG+TGG | - | tig0019197:52874-52893 | Msa1371310:CDS | 35.0% |
TCTTCAAATAGAGTAGAACC+TGG | + | tig0019197:52913-52932 | None:intergenic | 35.0% | |
TCTACTCTATTTGAAGAGCT+TGG | - | tig0019197:52916-52935 | Msa1371310:intron | 35.0% | |
CTACTCTATTTGAAGAGCTT+GGG | - | tig0019197:52917-52936 | Msa1371310:intron | 35.0% | |
TCTTCAAGAAGTAGCTTCTT+TGG | - | tig0019197:52993-53012 | Msa1371310:intron | 35.0% | |
AGTAGCTTCTTTGGATTCAA+TGG | - | tig0019197:53002-53021 | Msa1371310:intron | 35.0% | |
GTAGCTTCTTTGGATTCAAT+GGG | - | tig0019197:53003-53022 | Msa1371310:intron | 35.0% | |
GTTATAACATGAACCAAGAC+AGG | + | tig0019197:53030-53049 | None:intergenic | 35.0% | |
! | GTGCTTAGACTCAATTGTTT+TGG | - | tig0019197:53537-53556 | Msa1371310:intron | 35.0% |
! | TACTTTTAATGTGCCTGAGT+GGG | - | tig0019197:53562-53581 | Msa1371310:intron | 35.0% |
TGAAACAAATTCAACAAGGG+GGG | + | tig0019197:53609-53628 | None:intergenic | 35.0% | |
TTTACTCCAACCAGTAGATT+GGG | + | tig0019197:53738-53757 | None:intergenic | 35.0% | |
ACTGGTTGGAGTAAACTATA+TGG | - | tig0019197:53743-53762 | Msa1371310:intron | 35.0% | |
TTTCAGCTCATATCAGGAAA+TGG | + | tig0019197:53907-53926 | None:intergenic | 35.0% | |
AAGCCAAATAAATGCAGTGT+TGG | + | tig0019197:53930-53949 | None:intergenic | 35.0% | |
!!! | TACCATATGCTTTTGAAACC+AGG | - | tig0019197:53997-54016 | Msa1371310:intron | 35.0% |
! | TTCCTGGTTTCAAAAGCATA+TGG | + | tig0019197:54002-54021 | None:intergenic | 35.0% |
!! | TCTGATTTGTTAGACAATGC+TGG | - | tig0019197:54142-54161 | Msa1371310:intron | 35.0% |
! | ATTTGTTAGACAATGCTGGT+CGG | - | tig0019197:54146-54165 | Msa1371310:intron | 35.0% |
AACATATGGTGATTGCTTTG+TGG | - | tig0019197:54174-54193 | Msa1371310:intron | 35.0% | |
TGAGAAAGACAAAGACATTG+TGG | - | tig0019197:54216-54235 | Msa1371310:intron | 35.0% | |
CCCACATTAAAAATCCTATC+TGG | + | tig0019197:54298-54317 | None:intergenic | 35.0% | |
!! | TTTGCTTCTGGTTTATCATG+TGG | - | tig0019197:54343-54362 | Msa1371310:intron | 35.0% |
ATAAGTATGAACCTGGTCAT+AGG | + | tig0019197:54416-54435 | None:intergenic | 35.0% | |
AGCTGAAATAAGTATGAACC+TGG | + | tig0019197:54423-54442 | None:intergenic | 35.0% | |
TGTCTGTTACCTACATATAG+TGG | + | tig0019197:54462-54481 | None:intergenic | 35.0% | |
! | AGAACATCCTATCTTTTGTC+AGG | - | tig0019197:54497-54516 | Msa1371310:intron | 35.0% |
! | GAACATCCTATCTTTTGTCA+GGG | - | tig0019197:54498-54517 | Msa1371310:intron | 35.0% |
TAAAGTGGGGGTCTAAAAAA+AGG | + | tig0019197:54550-54569 | None:intergenic | 35.0% | |
TTAAATGAGGGGTCTTTACT+AGG | + | tig0019197:54691-54710 | None:intergenic | 35.0% | |
TGCTTACAATTTGGCAGTTA+AGG | + | tig0019197:54823-54842 | None:intergenic | 35.0% | |
TGCCAAATTGTAAGCAATGA+AGG | - | tig0019197:54827-54846 | Msa1371310:intron | 35.0% | |
GCCAAATTGTAAGCAATGAA+GGG | - | tig0019197:54828-54847 | Msa1371310:intron | 35.0% | |
CCAAATTGTAAGCAATGAAG+GGG | - | tig0019197:54829-54848 | Msa1371310:intron | 35.0% | |
TCAATTCCCATACTTCCTTA+GGG | + | tig0019197:55105-55124 | None:intergenic | 35.0% | |
! | ATTTGCAATATGTGAGTTGG+TGG | - | tig0019197:55195-55214 | Msa1371310:intron | 35.0% |
!! | TTTGCAATATGTGAGTTGGT+GGG | - | tig0019197:55196-55215 | Msa1371310:intron | 35.0% |
ATTCTGTTCTGCATACAAGT+AGG | + | tig0019197:55232-55251 | None:intergenic | 35.0% | |
TTATATCAAATGCTCCACAC+TGG | + | tig0019197:55408-55427 | None:intergenic | 35.0% | |
! | ATGATCAACCAGTTTGCTTT+CGG | - | tig0019197:55518-55537 | Msa1371310:CDS | 35.0% |
AAAGACGAAGCTATACATGA+TGG | - | tig0019197:55565-55584 | Msa1371310:CDS | 35.0% | |
! | ACATGATGGAATTCCAATTG+AGG | - | tig0019197:55579-55598 | Msa1371310:CDS | 35.0% |
GTTTATCAAGAAAACAGCGT+TGG | + | tig0019197:55612-55631 | None:intergenic | 35.0% | |
TACTATGACAATATTGGGGA+AGG | + | tig0019197:55706-55725 | None:intergenic | 35.0% | |
TACCACTCCTAAGTTAAAGA+GGG | + | tig0019197:55738-55757 | None:intergenic | 35.0% | |
AAGGGAAGAATTCTTGTTGA+AGG | - | tig0019197:55783-55802 | Msa1371310:intron | 35.0% | |
AGGTAAAGATGTTGCCTTAT+TGG | - | tig0019197:55803-55822 | Msa1371310:intron | 35.0% | |
! | GGTAAAGATGTTGCCTTATT+GGG | - | tig0019197:55804-55823 | Msa1371310:intron | 35.0% |
CATTGATCCATATCCCAATA+AGG | + | tig0019197:55820-55839 | None:intergenic | 35.0% | |
CTTATTGGGATATGGATCAA+TGG | - | tig0019197:55818-55837 | Msa1371310:intron | 35.0% | |
AATGGTTCAGAACTGTCTAA+AGG | - | tig0019197:55836-55855 | Msa1371310:intron | 35.0% | |
CATTCACTTCTTGCAAATCT+TGG | - | tig0019197:55861-55880 | Msa1371310:intron | 35.0% | |
TTTCTAATTACCGTTGAGGA+AGG | - | tig0019197:55966-55985 | Msa1371310:CDS | 35.0% | |
TTCTAATTACCGTTGAGGAA+GGG | - | tig0019197:55967-55986 | Msa1371310:CDS | 35.0% | |
GAGCAATAAATTGAGCAACA+TGG | + | tig0019197:56013-56032 | None:intergenic | 35.0% | |
GCTCAATTTATTGCTCTTGA+TGG | - | tig0019197:56017-56036 | Msa1371310:CDS | 35.0% | |
GCATGTTCAATATAACTGTC+TGG | + | tig0019197:56263-56282 | None:intergenic | 35.0% | |
AAGAGAACCAAGAATGCAAA+AGG | - | tig0019197:56436-56455 | Msa1371310:CDS | 35.0% | |
!! | TTAGTTCTGATTTGCATGTC+TGG | - | tig0019197:56500-56519 | Msa1371310:CDS | 35.0% |
TCTGGTGAAAAAAGAGATCA+TGG | - | tig0019197:56518-56537 | Msa1371310:CDS | 35.0% | |
CTGGTGAAAAAAGAGATCAT+GGG | - | tig0019197:56519-56538 | Msa1371310:CDS | 35.0% | |
!!! | TTGTTTTGAGGATGCTAACA+TGG | - | tig0019197:56672-56691 | Msa1371310:five_prime_UTR | 35.0% |
!!! | TGTTTTGAGGATGCTAACAT+GGG | - | tig0019197:56673-56692 | Msa1371310:five_prime_UTR | 35.0% |
!!! | TTCCAACTTATTTTGCTGTG+AGG | - | tig0019197:56718-56737 | Msa1371310:five_prime_UTR | 35.0% |
GGTCAATTTGTCGTCTCATA+CGG | - | tig0019197:49013-49032 | Msa1371310:three_prime_UTR | 40.0% | |
GAATGGAAAGGGATCACAAA+TGG | + | tig0019197:49130-49149 | None:intergenic | 40.0% | |
TTAGGGTTTGGGAATGGAAA+GGG | + | tig0019197:49141-49160 | None:intergenic | 40.0% | |
! | GATTCTGGAAAGGGGAAATT+GGG | + | tig0019197:49188-49207 | None:intergenic | 40.0% |
! | TGATTCTGGAAAGGGGAAAT+TGG | + | tig0019197:49189-49208 | None:intergenic | 40.0% |
! | TACAAGGTGATTCTGGAAAG+GGG | + | tig0019197:49196-49215 | None:intergenic | 40.0% |
GAAAGGTTCTTCAAGCAAAG+AGG | + | tig0019197:49325-49344 | None:intergenic | 40.0% | |
CATGATGTATTGCAACTGTG+AGG | + | tig0019197:49450-49469 | None:intergenic | 40.0% | |
CTCCAGTTGACAAGATATTG+TGG | - | tig0019197:49479-49498 | Msa1371310:CDS | 40.0% | |
TCCCACAATATCTTGTCAAC+TGG | + | tig0019197:49484-49503 | None:intergenic | 40.0% | |
GACAAGATATTGTGGGATGT+CGG | - | tig0019197:49487-49506 | Msa1371310:intron | 40.0% | |
GAGAGTGAATACGATGCATT+TGG | - | tig0019197:49736-49755 | Msa1371310:CDS | 40.0% | |
AACAGTATATCTGCTGGACT+TGG | - | tig0019197:49775-49794 | Msa1371310:CDS | 40.0% | |
GCAGTTGCAAGGGATATTAA+AGG | - | tig0019197:50011-50030 | Msa1371310:intron | 40.0% | |
AGCAATTGGACAACTATGTC+TGG | - | tig0019197:50062-50081 | Msa1371310:intron | 40.0% | |
AATGAGCAATGCAGGTTACT+TGG | - | tig0019197:50100-50119 | Msa1371310:intron | 40.0% | |
!! | TTTTTGGGAGTAAAGAGTGG+CGG | + | tig0019197:50157-50176 | None:intergenic | 40.0% |
!! | ACTAGATAGAGCATTGACAG+AGG | + | tig0019197:50198-50217 | None:intergenic | 40.0% |
! | TTGCATTTTCTCTGCAAAGG+AGG | + | tig0019197:50294-50313 | None:intergenic | 40.0% |
! | GTGTGCAGAGTATTAATTGG+AGG | + | tig0019197:50590-50609 | None:intergenic | 40.0% |
AAATCAGAAATGGGTCCTCT+TGG | + | tig0019197:51044-51063 | None:intergenic | 40.0% | |
! | GAGGATGGTGACATTTTTCA+TGG | + | tig0019197:51135-51154 | None:intergenic | 40.0% |
GAATCATGGGTACCAAATTG+AGG | + | tig0019197:51154-51173 | None:intergenic | 40.0% | |
!! | AGGAGGGTATTGAAATTGAG+AGG | - | tig0019197:51300-51319 | Msa1371310:intron | 40.0% |
!! | GGAGGGTATTGAAATTGAGA+GGG | - | tig0019197:51301-51320 | Msa1371310:intron | 40.0% |
TGAAATTGAGAGGGAGAATG+GGG | - | tig0019197:51310-51329 | Msa1371310:intron | 40.0% | |
TAACTTGAACAGCCTGTAAC+AGG | - | tig0019197:51458-51477 | Msa1371310:CDS | 40.0% | |
AACAGCCTGTAACAGGTAAA+AGG | - | tig0019197:51465-51484 | Msa1371310:CDS | 40.0% | |
!! | GTGTGAAAAGAGAGTGTTAG+AGG | - | tig0019197:51528-51547 | Msa1371310:CDS | 40.0% |
!!! | ATTTCTGTTTTTGGGGTTGG+GGG | + | tig0019197:51635-51654 | None:intergenic | 40.0% |
!!! | CATTTCTGTTTTTGGGGTTG+GGG | + | tig0019197:51636-51655 | None:intergenic | 40.0% |
!!! | GCATTTCTGTTTTTGGGGTT+GGG | + | tig0019197:51637-51656 | None:intergenic | 40.0% |
!!! | AGCATTTCTGTTTTTGGGGT+TGG | + | tig0019197:51638-51657 | None:intergenic | 40.0% |
ACCCCAAAAACAGAAATGCT+TGG | - | tig0019197:51638-51657 | Msa1371310:intron | 40.0% | |
AAAATCATTACCTGGCCTAG+TGG | - | tig0019197:52042-52061 | Msa1371310:intron | 40.0% | |
ACTTGTTTGAAAGCAGCAAG+GGG | - | tig0019197:52069-52088 | Msa1371310:intron | 40.0% | |
GGATCTTAGTATAGACCCAT+GGG | + | tig0019197:52301-52320 | None:intergenic | 40.0% | |
GAGGTAACTAAAGGAGAGAT+CGG | - | tig0019197:52418-52437 | Msa1371310:intron | 40.0% | |
AAAGGAGAGATCGGAAACTA+AGG | - | tig0019197:52427-52446 | Msa1371310:intron | 40.0% | |
CATTACGATATAGAGACTGG+AGG | + | tig0019197:52785-52804 | None:intergenic | 40.0% | |
! | ATACGTTTTGTAACACCCTG+TGG | + | tig0019197:52826-52845 | None:intergenic | 40.0% |
! | CAGGGTGTTACAAAACGTAT+TGG | - | tig0019197:52826-52845 | Msa1371310:CDS | 40.0% |
! | GTTACAAAACGTATTGGCAG+AGG | - | tig0019197:52832-52851 | Msa1371310:CDS | 40.0% |
TGAATATGCTCGTGGTATGA+TGG | - | tig0019197:52882-52901 | Msa1371310:CDS | 40.0% | |
GAATATGCTCGTGGTATGAT+GGG | - | tig0019197:52883-52902 | Msa1371310:CDS | 40.0% | |
TCAAATAGAGTAGAACCTGG+TGG | + | tig0019197:52910-52929 | None:intergenic | 40.0% | |
! | GAGCTTGGGTTGTATTACAT+AGG | - | tig0019197:52931-52950 | Msa1371310:intron | 40.0% |
ATACATAACTGACAAGCAGC+AGG | - | tig0019197:53086-53105 | Msa1371310:intron | 40.0% | |
GTGGTACAGAAAGAAACTCT+AGG | - | tig0019197:53317-53336 | Msa1371310:intron | 40.0% | |
CACTCAGGCACATTAAAAGT+AGG | + | tig0019197:53563-53582 | None:intergenic | 40.0% | |
!! | CTACTTTTAATGTGCCTGAG+TGG | - | tig0019197:53561-53580 | Msa1371310:intron | 40.0% |
GTTTACTCCAACCAGTAGAT+TGG | + | tig0019197:53739-53758 | None:intergenic | 40.0% | |
!! | TGTTGGTTTCAGCTCATATC+AGG | + | tig0019197:53913-53932 | None:intergenic | 40.0% |
GCATATGGTACTACACCTAT+AGG | + | tig0019197:53987-54006 | None:intergenic | 40.0% | |
TGATTGCTTTGTGGAGAGTT+TGG | - | tig0019197:54183-54202 | Msa1371310:intron | 40.0% | |
GTCTTTGTCTTTCTCAGCTT+CGG | + | tig0019197:54212-54231 | None:intergenic | 40.0% | |
GCCGTCACTTAAACTGTTTA+TGG | - | tig0019197:54264-54283 | Msa1371310:intron | 40.0% | |
GCTCTCTGTAAAAAGGAAGA+AGG | + | tig0019197:54394-54413 | None:intergenic | 40.0% | |
GTCATAGGCTCTCTGTAAAA+AGG | + | tig0019197:54401-54420 | None:intergenic | 40.0% | |
CCCCTTCATTGCTTACAATT+TGG | + | tig0019197:54832-54851 | None:intergenic | 40.0% | |
ATGAACCTTAAGGCTTCGTT+TGG | - | tig0019197:54862-54881 | Msa1371310:intron | 40.0% | |
TGAACCTTAAGGCTTCGTTT+GGG | - | tig0019197:54863-54882 | Msa1371310:intron | 40.0% | |
! | TTTAGTTCCCCCAAATTTGG+AGG | - | tig0019197:55017-55036 | Msa1371310:intron | 40.0% |
TACTTCCTTAGGGTCTGTTT+GGG | + | tig0019197:55095-55114 | None:intergenic | 40.0% | |
ATACTTCCTTAGGGTCTGTT+TGG | + | tig0019197:55096-55115 | None:intergenic | 40.0% | |
AAACAGACCCTAAGGAAGTA+TGG | - | tig0019197:55095-55114 | Msa1371310:intron | 40.0% | |
! | AACAGACCCTAAGGAAGTAT+GGG | - | tig0019197:55096-55115 | Msa1371310:intron | 40.0% |
CTCAATTCCCATACTTCCTT+AGG | + | tig0019197:55106-55125 | None:intergenic | 40.0% | |
! | CTAAGGAAGTATGGGAATTG+AGG | - | tig0019197:55104-55123 | Msa1371310:intron | 40.0% |
GTATGGGAATTGAGGATATC+TGG | - | tig0019197:55112-55131 | Msa1371310:intron | 40.0% | |
CTTGTAATGACAAAACGCAC+TGG | + | tig0019197:55355-55374 | None:intergenic | 40.0% | |
! | CGTTTTGTCATTACAAGTGC+AGG | - | tig0019197:55358-55377 | Msa1371310:intron | 40.0% |
TGTCATTACAAGTGCAGGAT+TGG | - | tig0019197:55363-55382 | Msa1371310:intron | 40.0% | |
! | ATTACAAGTGCAGGATTGGT+AGG | - | tig0019197:55367-55386 | Msa1371310:intron | 40.0% |
! | GGTGCCATGACAATCATATT+TGG | + | tig0019197:55448-55467 | None:intergenic | 40.0% |
! | AGTTTGCTTTCGGTATCCTA+GGG | - | tig0019197:55528-55547 | Msa1371310:CDS | 40.0% |
CGTTGGTCAATTACCTCAAT+TGG | + | tig0019197:55595-55614 | None:intergenic | 40.0% | |
! | GTATCTCCCCTCTTTAACTT+AGG | - | tig0019197:55728-55747 | Msa1371310:intron | 40.0% |
ACCACTCCTAAGTTAAAGAG+GGG | + | tig0019197:55737-55756 | None:intergenic | 40.0% | |
CTACCACTCCTAAGTTAAAG+AGG | + | tig0019197:55739-55758 | None:intergenic | 40.0% | |
! | GATGTTGCCTTATTGGGATA+TGG | - | tig0019197:55810-55829 | Msa1371310:intron | 40.0% |
TCTTGCAAATCTTGGCATTG+AGG | - | tig0019197:55869-55888 | Msa1371310:intron | 40.0% | |
ACTTCTCGACCGAAGAATTA+AGG | - | tig0019197:56040-56059 | Msa1371310:CDS | 40.0% | |
TTGACATATCTTGTGTGCCA+AGG | - | tig0019197:56145-56164 | Msa1371310:intron | 40.0% | |
TTCTTGATCAACTCTTCCAG+TGG | - | tig0019197:56222-56241 | Msa1371310:intron | 40.0% | |
! | GCTTGGTTAAGCTGTTGATT+TGG | + | tig0019197:56290-56309 | None:intergenic | 40.0% |
AATCAACAGCTTAACCAAGC+AGG | - | tig0019197:56290-56309 | Msa1371310:CDS | 40.0% | |
ATCAACAGCTTAACCAAGCA+GGG | - | tig0019197:56291-56310 | Msa1371310:CDS | 40.0% | |
GCATTCTCAATTTACGAGAC+TGG | + | tig0019197:56647-56666 | None:intergenic | 40.0% | |
CACCTCACAGCAAAATAAGT+TGG | + | tig0019197:56723-56742 | None:intergenic | 40.0% | |
!! | ATTTTGCTGTGAGGTGATTG+TGG | - | tig0019197:56727-56746 | Msa1371310:five_prime_UTR | 40.0% |
!! | TTTTGCTGTGAGGTGATTGT+GGG | - | tig0019197:56728-56747 | Msa1371310:five_prime_UTR | 40.0% |
! | TCTCTCTAGCTTCACTCCTT+TGG | - | tig0019197:48923-48942 | Msa1371310:three_prime_UTR | 45.0% |
GTTAGGGTTTGGGAATGGAA+AGG | + | tig0019197:49142-49161 | None:intergenic | 45.0% | |
CAATCTGCGAGTTAGGGTTT+GGG | + | tig0019197:49152-49171 | None:intergenic | 45.0% | |
GCAATCCAATCTGCGAGTTA+GGG | + | tig0019197:49158-49177 | None:intergenic | 45.0% | |
AGCAATCCAATCTGCGAGTT+AGG | + | tig0019197:49159-49178 | None:intergenic | 45.0% | |
ACTGTGTCAAGAATGGGTGT+TGG | + | tig0019197:49295-49314 | None:intergenic | 45.0% | |
CTTGAAGAACCTTTCTCAGC+AGG | - | tig0019197:49330-49349 | Msa1371310:exon | 45.0% | |
GTTTCAACTCCTGCTGAGAA+AGG | + | tig0019197:49342-49361 | None:intergenic | 45.0% | |
ACTGAATCCTAGTATGGCTG+TGG | - | tig0019197:49420-49439 | Msa1371310:CDS | 45.0% | |
!! | GAATACGATGCATTTGGTGC+AGG | - | tig0019197:49742-49761 | Msa1371310:CDS | 45.0% |
GGATGCAACAGTATATCTGC+TGG | - | tig0019197:49769-49788 | Msa1371310:CDS | 45.0% | |
TTTCAGGAATGGCAGTTGCA+AGG | - | tig0019197:50000-50019 | Msa1371310:intron | 45.0% | |
TTCAGGAATGGCAGTTGCAA+GGG | - | tig0019197:50001-50020 | Msa1371310:intron | 45.0% | |
TATGAGGCAATGAGCAATGC+AGG | - | tig0019197:50092-50111 | Msa1371310:intron | 45.0% | |
! | TCGAGCCCTCCTCAATTTTT+GGG | + | tig0019197:50172-50191 | None:intergenic | 45.0% |
! | TTCGAGCCCTCCTCAATTTT+TGG | + | tig0019197:50173-50192 | None:intergenic | 45.0% |
CTCTATCTAGTACCCTTAGC+AGG | - | tig0019197:50207-50226 | Msa1371310:CDS | 45.0% | |
!! | TTGTTGTTTGTACCGGTTGC+AGG | + | tig0019197:50891-50910 | None:intergenic | 45.0% |
GTCTCTAGCACCATAGACAT+CGG | + | tig0019197:50981-51000 | None:intergenic | 45.0% | |
!!! | GGTGCCGTTATTTTTGAAGG+AGG | + | tig0019197:51018-51037 | None:intergenic | 45.0% |
AATAACGGCACCATACCAAG+AGG | - | tig0019197:51026-51045 | Msa1371310:intron | 45.0% | |
AGAAATGGGTCCTCTTGGTA+TGG | + | tig0019197:51039-51058 | None:intergenic | 45.0% | |
AGCACGGCTCTTCTTGAAAA+GGG | + | tig0019197:51093-51112 | None:intergenic | 45.0% | |
CATGGGTACCAAATTGAGGA+TGG | + | tig0019197:51150-51169 | None:intergenic | 45.0% | |
GAAATTGAGAGGGAGAATGG+GGG | - | tig0019197:51311-51330 | Msa1371310:intron | 45.0% | |
GAATGGGGGAGAAATGGAAA+TGG | - | tig0019197:51325-51344 | Msa1371310:CDS | 45.0% | |
AGCTCGTCTTTGTGTGCATT+AGG | - | tig0019197:51587-51606 | Msa1371310:CDS | 45.0% | |
CATGGACACGATACGAGTAT+CGG | - | tig0019197:51676-51695 | Msa1371310:intron | 45.0% | |
ACAAGTTAAACCACTAGGCC+AGG | + | tig0019197:52055-52074 | None:intergenic | 45.0% | |
CTTGTTTGAAAGCAGCAAGG+GGG | - | tig0019197:52070-52089 | Msa1371310:intron | 45.0% | |
!! | TTAGTTTTCAGCTGTCGCAG+TGG | + | tig0019197:52223-52242 | None:intergenic | 45.0% |
CGGATCTTAGTATAGACCCA+TGG | + | tig0019197:52302-52321 | None:intergenic | 45.0% | |
GAGAGATCGGAAACTAAGGA+GGG | - | tig0019197:52431-52450 | Msa1371310:intron | 45.0% | |
AGAGATCGGAAACTAAGGAG+GGG | - | tig0019197:52432-52451 | Msa1371310:intron | 45.0% | |
TTTGATACGTCGTCGATACG+CGG | + | tig0019197:52535-52554 | None:intergenic | 45.0% | |
! | GACAGAGTATCAGAGCGTAT+CGG | - | tig0019197:52611-52630 | Msa1371310:intron | 45.0% |
! | ATCAGAGCGTATCGGCATAT+CGG | - | tig0019197:52619-52638 | Msa1371310:intron | 45.0% |
TCGGCATATCGGATACGATA+TGG | - | tig0019197:52630-52649 | Msa1371310:CDS | 45.0% | |
! | TTTGACGTATCGGTGCTTCA+TGG | - | tig0019197:52660-52679 | Msa1371310:CDS | 45.0% |
! | TTGACGTATCGGTGCTTCAT+GGG | - | tig0019197:52661-52680 | Msa1371310:CDS | 45.0% |
TAGAGACTGGAGGCCAAATA+AGG | + | tig0019197:52775-52794 | None:intergenic | 45.0% | |
GTTGTATTACATAGGCCCAG+TGG | - | tig0019197:52939-52958 | Msa1371310:intron | 45.0% | |
TATTACATAGGCCCAGTGGA+TGG | - | tig0019197:52943-52962 | Msa1371310:intron | 45.0% | |
CGATATTGTGTCCATCCACT+GGG | + | tig0019197:52957-52976 | None:intergenic | 45.0% | |
TCGATATTGTGTCCATCCAC+TGG | + | tig0019197:52958-52977 | None:intergenic | 45.0% | |
ATAACTGACAAGCAGCAGGA+TGG | - | tig0019197:53090-53109 | Msa1371310:intron | 45.0% | |
TTCAACAAGGGGGGAAATCT+AGG | + | tig0019197:53600-53619 | None:intergenic | 45.0% | |
ACAAACCAAGCCCAATCTAC+TGG | - | tig0019197:53725-53744 | Msa1371310:intron | 45.0% | |
! | TTGGCTTCTTAGCTTGACTC+TGG | - | tig0019197:53943-53962 | Msa1371310:intron | 45.0% |
GACATTGTGGTTGTTCATGC+AGG | - | tig0019197:54229-54248 | Msa1371310:intron | 45.0% | |
!! | GCTTCTGGTTTATCATGTGG+TGG | - | tig0019197:54346-54365 | Msa1371310:intron | 45.0% |
TTTACAGAGAGCCTATGACC+AGG | - | tig0019197:54402-54421 | Msa1371310:intron | 45.0% | |
! | ATCCTATCTTTTGTCAGGGC+AGG | - | tig0019197:54502-54521 | Msa1371310:intron | 45.0% |
GACCTGCCCGATATATATCT+AGG | + | tig0019197:54757-54776 | None:intergenic | 45.0% | |
GAACCTTAAGGCTTCGTTTG+GGG | - | tig0019197:54864-54883 | Msa1371310:intron | 45.0% | |
AACCTTAAGGCTTCGTTTGG+GGG | - | tig0019197:54865-54884 | Msa1371310:intron | 45.0% | |
TTTGAGGGGACAGAAAGAGA+GGG | - | tig0019197:54913-54932 | Msa1371310:intron | 45.0% | |
TTTAGGAGGGGATGACTTTG+GGG | + | tig0019197:55070-55089 | None:intergenic | 45.0% | |
GTTTAGGAGGGGATGACTTT+GGG | + | tig0019197:55071-55090 | None:intergenic | 45.0% | |
AGTTTAGGAGGGGATGACTT+TGG | + | tig0019197:55072-55091 | None:intergenic | 45.0% | |
TCTGTTTGGGAGTTTAGGAG+GGG | + | tig0019197:55082-55101 | None:intergenic | 45.0% | |
GTCTGTTTGGGAGTTTAGGA+GGG | + | tig0019197:55083-55102 | None:intergenic | 45.0% | |
TAGGGTCTGTTTGGGAGTTT+AGG | + | tig0019197:55087-55106 | None:intergenic | 45.0% | |
AAACTCCCAAACAGACCCTA+AGG | - | tig0019197:55087-55106 | Msa1371310:intron | 45.0% | |
GGAATTGAGGATATCTGGTC+TGG | - | tig0019197:55117-55136 | Msa1371310:intron | 45.0% | |
TGTTCTGCATACAAGTAGGC+AGG | + | tig0019197:55228-55247 | None:intergenic | 45.0% | |
ACATGTTACGTGTCATGTCC+AGG | - | tig0019197:55300-55319 | Msa1371310:intron | 45.0% | |
ATCAAATGCTCCACACTGGA+GGG | + | tig0019197:55404-55423 | None:intergenic | 45.0% | |
TATCAAATGCTCCACACTGG+AGG | + | tig0019197:55405-55424 | None:intergenic | 45.0% | |
ACAAGTTCAGCCTCATCAGA+TGG | + | tig0019197:55469-55488 | None:intergenic | 45.0% | |
CTAGGATACCGAAAGCAAAC+TGG | + | tig0019197:55529-55548 | None:intergenic | 45.0% | |
! | CAGTTTGCTTTCGGTATCCT+AGG | - | tig0019197:55527-55546 | Msa1371310:CDS | 45.0% |
GTTTGCTTTCGGTATCCTAG+GGG | - | tig0019197:55529-55548 | Msa1371310:CDS | 45.0% | |
! | TCCCCTCTTTAACTTAGGAG+TGG | - | tig0019197:55733-55752 | Msa1371310:intron | 45.0% |
TCCAATAGACCCTTCCTCAA+CGG | + | tig0019197:55979-55998 | None:intergenic | 45.0% | |
GAAGGGTCTATTGGAGGATT+TGG | - | tig0019197:55984-56003 | Msa1371310:CDS | 45.0% | |
GTAAAACAATTGGTCGCCAC+TGG | + | tig0019197:56241-56260 | None:intergenic | 45.0% | |
AGGATAGAGCTTCACGAGTA+CGG | + | tig0019197:56361-56380 | None:intergenic | 45.0% | |
AAGATGCTTCGTGTCCTTTC+CGG | - | tig0019197:56404-56423 | Msa1371310:CDS | 45.0% | |
TGGTTCTCTTATGCACATCC+CGG | + | tig0019197:56426-56445 | None:intergenic | 45.0% | |
!!! | AAAAAAATAATGTTTTTTTA+AGG | + | tig0019197:50924-50943 | None:intergenic | 5.0% |
TGCGAGTTAGGGTTTGGGAA+TGG | + | tig0019197:49147-49166 | None:intergenic | 50.0% | |
CCAATCTGCGAGTTAGGGTT+TGG | + | tig0019197:49153-49172 | None:intergenic | 50.0% | |
CCAAACCCTAACTCGCAGAT+TGG | - | tig0019197:49150-49169 | Msa1371310:three_prime_UTR | 50.0% | |
GAATCCTAGTATGGCTGTGG+TGG | - | tig0019197:49423-49442 | Msa1371310:CDS | 50.0% | |
!! | GATGCATTTGGTGCAGGTCA+TGG | - | tig0019197:49748-49767 | Msa1371310:CDS | 50.0% |
TTGGACAACTATGTCTGGCC+AGG | - | tig0019197:50067-50086 | Msa1371310:intron | 50.0% | |
TATGTCTGGCCAGGTCTATG+AGG | - | tig0019197:50076-50095 | Msa1371310:intron | 50.0% | |
TGCTCATTGCCTCATAGACC+TGG | + | tig0019197:50088-50107 | None:intergenic | 50.0% | |
! | ACTGGATTGGAGCCTGCTAA+GGG | + | tig0019197:50222-50241 | None:intergenic | 50.0% |
! | TACTGGATTGGAGCCTGCTA+AGG | + | tig0019197:50223-50242 | None:intergenic | 50.0% |
CAGCACGGCTCTTCTTGAAA+AGG | + | tig0019197:51094-51113 | None:intergenic | 50.0% | |
GATACGACGCGTATCCGATA+CGG | - | tig0019197:51698-51717 | Msa1371310:intron | 50.0% | |
TGAACGACGTATCGCCGTAT+CGG | + | tig0019197:51715-51734 | None:intergenic | 50.0% | |
TTTCAGCTGTCGCAGTGGAA+AGG | + | tig0019197:52218-52237 | None:intergenic | 50.0% | |
AGAAAACCTAGGGGATGCCA+TGG | - | tig0019197:52273-52292 | Msa1371310:intron | 50.0% | |
GGAGAGATCGGAAACTAAGG+AGG | - | tig0019197:52430-52449 | Msa1371310:intron | 50.0% | |
AGATGAACCAGCCGTATCAG+TGG | - | tig0019197:52490-52509 | Msa1371310:intron | 50.0% | |
GGATTCAATGGGTCCTGTCT+TGG | - | tig0019197:53014-53033 | Msa1371310:intron | 50.0% | |
ACCAAGCCCAATCTACTGGT+TGG | - | tig0019197:53729-53748 | Msa1371310:intron | 50.0% | |
TCCAACCAGTAGATTGGGCT+TGG | + | tig0019197:53733-53752 | None:intergenic | 50.0% | |
! | GCTTCTTAGCTTGACTCTGG+TGG | - | tig0019197:53946-53965 | Msa1371310:intron | 50.0% |
! | GCTGGTCGGCTTCAAACATA+TGG | - | tig0019197:54160-54179 | Msa1371310:intron | 50.0% |
CACGCTGTCACATTTGCTTC+TGG | - | tig0019197:54331-54350 | Msa1371310:intron | 50.0% | |
GACCTGCCCTGACAAAAGAT+AGG | + | tig0019197:54507-54526 | None:intergenic | 50.0% | |
GGCCTAGATATATATCGGGC+AGG | - | tig0019197:54752-54771 | Msa1371310:intron | 50.0% | |
AACCCCCAAACGAAGCCTTA+AGG | + | tig0019197:54870-54889 | None:intergenic | 50.0% | |
TAAGGCTTCGTTTGGGGGTT+TGG | - | tig0019197:54870-54889 | Msa1371310:intron | 50.0% | |
AGGGAATGGCAGGACTTTGA+GGG | - | tig0019197:54898-54917 | Msa1371310:intron | 50.0% | |
! | CTTTGAGGGGACAGAAAGAG+AGG | - | tig0019197:54912-54931 | Msa1371310:intron | 50.0% |
GGTCTGTTTGGGAGTTTAGG+AGG | + | tig0019197:55084-55103 | None:intergenic | 50.0% | |
TGTTACGTGTCATGTCCAGG+TGG | - | tig0019197:55303-55322 | Msa1371310:intron | 50.0% | |
GATCAACATCGTGAACCACC+TGG | + | tig0019197:55321-55340 | None:intergenic | 50.0% | |
! | GCAGGATTGGTAGGTTCAGA+TGG | - | tig0019197:55376-55395 | Msa1371310:intron | 50.0% |
TCAAATGCTCCACACTGGAG+GGG | + | tig0019197:55403-55422 | None:intergenic | 50.0% | |
TGTCATGGCACCATCTGATG+AGG | - | tig0019197:55456-55475 | Msa1371310:intron | 50.0% | |
TGAGGCTGAACTTGTGCACA+TGG | - | tig0019197:55474-55493 | Msa1371310:CDS | 50.0% | |
AGCTTCGTCTTTCCCAACCA+AGG | + | tig0019197:55557-55576 | None:intergenic | 50.0% | |
AGGTGACTGTTGCTGATGCA+AGG | - | tig0019197:55889-55908 | Msa1371310:intron | 50.0% | |
CTCAGAAGCTCGATGTCAAG+GGG | + | tig0019197:55924-55943 | None:intergenic | 50.0% | |
CCTCAGAAGCTCGATGTCAA+GGG | + | tig0019197:55925-55944 | None:intergenic | 50.0% | |
ACCGTTGAGGAAGGGTCTAT+TGG | - | tig0019197:55975-55994 | Msa1371310:CDS | 50.0% | |
GTTGAGGAAGGGTCTATTGG+AGG | - | tig0019197:55978-55997 | Msa1371310:CDS | 50.0% | |
CTTAACCAAGCAGGGTTGAC+TGG | - | tig0019197:56299-56318 | Msa1371310:CDS | 50.0% | |
! | TGCCACAGCATTGAGTTTGC+TGG | - | tig0019197:56334-56353 | Msa1371310:CDS | 50.0% |
! | GCCACAGCATTGAGTTTGCT+GGG | - | tig0019197:56335-56354 | Msa1371310:CDS | 50.0% |
AGATGCTTCGTGTCCTTTCC+GGG | - | tig0019197:56405-56424 | Msa1371310:CDS | 50.0% | |
CTCTTATGCACATCCCGGAA+AGG | + | tig0019197:56421-56440 | None:intergenic | 50.0% | |
AGGTCCACCACAGCCATACT+AGG | + | tig0019197:49430-49449 | None:intergenic | 55.0% | |
GAGGGAGAATGGGGGAGAAA+TGG | - | tig0019197:51319-51338 | Msa1371310:CDS | 55.0% | |
CGTACAATTGAACGGGCAGC+TGG | - | tig0019197:51925-51944 | Msa1371310:intron | 55.0% | |
! | TGAAAGCAGCAAGGGGGTGT+AGG | - | tig0019197:52076-52095 | Msa1371310:intron | 55.0% |
! | AGTGTCGAACTCGCGACCAT+TGG | - | tig0019197:52177-52196 | Msa1371310:intron | 55.0% |
GTGTCGAACTCGCGACCATT+GGG | - | tig0019197:52178-52197 | Msa1371310:intron | 55.0% | |
GTATAGACCCATGGGAGCCA+TGG | + | tig0019197:52293-52312 | None:intergenic | 55.0% | |
CCTCGGATACGCCACTGATA+CGG | + | tig0019197:52504-52523 | None:intergenic | 55.0% | |
CCTGTGGCAAAGCAGAAGTG+GGG | + | tig0019197:52810-52829 | None:intergenic | 55.0% | |
CCCTGTGGCAAAGCAGAAGT+GGG | + | tig0019197:52811-52830 | None:intergenic | 55.0% | |
CCCACTTCTGCTTTGCCACA+GGG | - | tig0019197:52808-52827 | Msa1371310:CDS | 55.0% | |
ACCCTGTGGCAAAGCAGAAG+TGG | + | tig0019197:52812-52831 | None:intergenic | 55.0% | |
GACGCATTTGATGCCCACTC+AGG | + | tig0019197:53578-53597 | None:intergenic | 55.0% | |
CTTCGTTTGGGGGTTTGGAG+AGG | - | tig0019197:54875-54894 | Msa1371310:intron | 55.0% | |
GTTTGGGGGTTTGGAGAGGA+GGG | - | tig0019197:54879-54898 | Msa1371310:intron | 55.0% | |
TTTGGAGAGGAGGGAATGGC+AGG | - | tig0019197:54888-54907 | Msa1371310:intron | 55.0% | |
GAGGGAATGGCAGGACTTTG+AGG | - | tig0019197:54897-54916 | Msa1371310:intron | 55.0% | |
GGGAATGGCAGGACTTTGAG+GGG | - | tig0019197:54899-54918 | Msa1371310:intron | 55.0% | |
GGCTGAACTTGTGCACATGG+TGG | - | tig0019197:55477-55496 | Msa1371310:CDS | 55.0% | |
!! | TATCCTAGGGGTGCCTTGGT+TGG | - | tig0019197:55541-55560 | Msa1371310:CDS | 55.0% |
!! | ATCCTAGGGGTGCCTTGGTT+GGG | - | tig0019197:55542-55561 | Msa1371310:CDS | 55.0% |
CCCTTGACATCGAGCTTCTG+AGG | - | tig0019197:55922-55941 | Msa1371310:intron | 55.0% | |
GCCTCAGAAGCTCGATGTCA+AGG | + | tig0019197:55926-55945 | None:intergenic | 55.0% | |
GATGTCCAGTCAACCCTGCT+TGG | + | tig0019197:56307-56326 | None:intergenic | 55.0% | |
GCCCAGCAAACTCAATGCTG+TGG | + | tig0019197:56339-56358 | None:intergenic | 55.0% | |
GGATACGCCACTGATACGGC+TGG | + | tig0019197:52500-52519 | None:intergenic | 60.0% | |
CCGTATCAGTGGCGTATCCG+AGG | - | tig0019197:52501-52520 | Msa1371310:intron | 60.0% | |
GTGGCGTATCCGAGGCATGT+CGG | - | tig0019197:52509-52528 | Msa1371310:intron | 60.0% | |
CCCCACTTCTGCTTTGCCAC+AGG | - | tig0019197:52807-52826 | Msa1371310:CDS | 60.0% | |
!! | CGTGGTATGATGGGTCCACC+AGG | - | tig0019197:52892-52911 | Msa1371310:CDS | 60.0% |
CGTTTGGGGGTTTGGAGAGG+AGG | - | tig0019197:54878-54897 | Msa1371310:intron | 60.0% | |
GGGGTTTGGAGAGGAGGGAA+TGG | - | tig0019197:54884-54903 | Msa1371310:intron | 60.0% | |
TCAGATGGTCCCCTCCAGTG+TGG | - | tig0019197:55391-55410 | Msa1371310:intron | 60.0% | |
!! | TCGGTATCCTAGGGGTGCCT+TGG | - | tig0019197:55537-55556 | Msa1371310:CDS | 60.0% |
! | TTCCCAACCAAGGCACCCCT+AGG | + | tig0019197:55547-55566 | None:intergenic | 60.0% |
TGGGAGCCATGGCATCCCCT+AGG | + | tig0019197:52282-52301 | None:intergenic | 65.0% | |
AGGGGATGCCATGGCTCCCA+TGG | - | tig0019197:52282-52301 | Msa1371310:intron | 65.0% | |
GGGGATGCCATGGCTCCCAT+GGG | - | tig0019197:52283-52302 | Msa1371310:intron | 65.0% | |
GATACGCGGCCGACATGCCT+CGG | + | tig0019197:52521-52540 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019197 | gene | 48902 | 56838 | 48902 | ID=Msa1371310;Name=Msa1371310 |
tig0019197 | mRNA | 48902 | 56838 | 48902 | ID=Msa1371310-mRNA-1;Parent=Msa1371310;Name=Msa1371310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=198|1|1|1|1|1|8|444|709 |
tig0019197 | exon | 48902 | 49498 | 48902 | ID=Msa1371310-mRNA-1:exon:2244;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 49679 | 49963 | 49679 | ID=Msa1371310-mRNA-1:exon:2243;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 50140 | 50418 | 50140 | ID=Msa1371310-mRNA-1:exon:2242;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 51317 | 51609 | 51317 | ID=Msa1371310-mRNA-1:exon:2241;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 52629 | 52911 | 52629 | ID=Msa1371310-mRNA-1:exon:2240;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 55466 | 55734 | 55466 | ID=Msa1371310-mRNA-1:exon:2239;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 55944 | 56094 | 55944 | ID=Msa1371310-mRNA-1:exon:2238;Parent=Msa1371310-mRNA-1 |
tig0019197 | exon | 56224 | 56838 | 56224 | ID=Msa1371310-mRNA-1:exon:2237;Parent=Msa1371310-mRNA-1 |
tig0019197 | five_prime_UTR | 56641 | 56838 | 56641 | ID=Msa1371310-mRNA-1:five_prime_utr;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 56224 | 56640 | 56224 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 55944 | 56094 | 55944 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 55466 | 55734 | 55466 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 52629 | 52911 | 52629 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 51317 | 51609 | 51317 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 50140 | 50418 | 50140 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 49679 | 49963 | 49679 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | CDS | 49346 | 49498 | 49346 | ID=Msa1371310-mRNA-1:cds;Parent=Msa1371310-mRNA-1 |
tig0019197 | three_prime_UTR | 48902 | 49345 | 48902 | ID=Msa1371310-mRNA-1:three_prime_utr;Parent=Msa1371310-mRNA-1 |
Gene Sequence |
Protein sequence |