Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515590 | XP_003602042.2 | 96.939 | 490 | 15 | 0 | 1 | 490 | 1 | 490 | 0.0 | 984 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515590 | sp|Q70DU8|AL3H1_ARATH | 68.058 | 479 | 153 | 0 | 10 | 488 | 4 | 482 | 0.0 | 704 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515590 | G7J4Y0 | 96.939 | 490 | 15 | 0 | 1 | 490 | 1 | 490 | 0.0 | 984 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0083240 | Msa0515590 | 0.801577 | 8.433745e-49 | -8.615850e-47 |
| Msa0129640 | Msa0515590 | 0.845936 | 2.974506e-59 | -8.615850e-47 |
| Msa0147790 | Msa0515590 | 0.801706 | 7.932095e-49 | -8.615850e-47 |
| Msa0238710 | Msa0515590 | 0.803986 | 2.683151e-49 | -8.615850e-47 |
| Msa0374290 | Msa0515590 | 0.967531 | 2.090426e-127 | -8.615850e-47 |
| Msa0397790 | Msa0515590 | 0.810951 | 8.929082e-51 | -8.615850e-47 |
| Msa0402800 | Msa0515590 | 0.811441 | 6.991375e-51 | -8.615850e-47 |
| Msa0469720 | Msa0515590 | 0.940159 | 3.752570e-100 | -8.615850e-47 |
| Msa0473540 | Msa0515590 | 0.813981 | 1.943754e-51 | -8.615850e-47 |
| Msa0481770 | Msa0515590 | 0.800522 | 1.385401e-48 | -8.615850e-47 |
| Msa0253130 | Msa0515590 | 0.803727 | 3.035919e-49 | -8.615850e-47 |
| Msa0316470 | Msa0515590 | 0.801191 | 1.011611e-48 | -8.615850e-47 |
| Msa0332360 | Msa0515590 | 0.815544 | 8.756783e-52 | -8.615850e-47 |
| Msa0351050 | Msa0515590 | 0.829611 | 4.672214e-55 | -8.615850e-47 |
| Msa0484700 | Msa0515590 | 0.813322 | 2.714410e-51 | -8.615850e-47 |
| Msa0486980 | Msa0515590 | 0.814916 | 1.207120e-51 | -8.615850e-47 |
| Msa0497860 | Msa0515590 | 0.807788 | 4.258960e-50 | -8.615850e-47 |
| Msa0515540 | Msa0515590 | 0.997893 | 1.939215e-251 | -8.615850e-47 |
| Msa0515590 | Msa0713060 | 0.806420 | 8.298713e-50 | -8.615850e-47 |
| Msa0515590 | Msa0816630 | 0.810343 | 1.208272e-50 | -8.615850e-47 |
| Msa0515590 | Msa0826380 | 0.806159 | 9.418399e-50 | -8.615850e-47 |
| Msa0515590 | Msa0863940 | 0.808324 | 3.274987e-50 | -8.615850e-47 |
| Msa0515590 | Msa0931420 | 0.952837 | 1.021073e-110 | -8.615850e-47 |
| Msa0515590 | Msa1068380 | 0.809983 | 1.444495e-50 | -8.615850e-47 |
| Msa0515590 | Msa1121300 | 0.818373 | 2.027946e-52 | -8.615850e-47 |
| Msa0515590 | Msa1156490 | 0.830447 | 2.921694e-55 | -8.615850e-47 |
| Msa0515590 | Msa1199870 | 0.820277 | 7.468090e-53 | -8.615850e-47 |
| Msa0515590 | Msa1212470 | 0.803238 | 3.834750e-49 | -8.615850e-47 |
| Msa0515590 | Msa1217260 | 0.807987 | 3.864735e-50 | -8.615850e-47 |
| Msa0515590 | Msa1252810 | 0.806896 | 6.583991e-50 | -8.615850e-47 |
| Msa0515590 | Msa1302340 | 0.812814 | 3.507401e-51 | -8.615850e-47 |
| Msa0515590 | Msa1329900 | 0.802390 | 5.740253e-49 | -8.615850e-47 |
| Msa0515590 | Msa1344330 | 0.820940 | 5.258550e-53 | -8.615850e-47 |
| Msa0515590 | Msa1369320 | 0.800157 | 1.644138e-48 | -8.615850e-47 |
| Msa0515590 | Msa1401110 | 0.809324 | 2.001614e-50 | -8.615850e-47 |
| Msa0515590 | Msa1412410 | 0.840893 | 6.610049e-58 | -8.615850e-47 |
| Msa0515590 | Msa1427860 | 0.843519 | 1.333479e-58 | -8.615850e-47 |
| Msa0515590 | Msa1453600 | 0.803588 | 3.245563e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515590 | MtrunA17_Chr3g0124811 | 96.939 | 490 | 15 | 0 | 1 | 490 | 1 | 490 | 0.0 | 984 |
| Msa0515590 | MtrunA17_Chr8g0384741 | 66.122 | 490 | 166 | 0 | 1 | 490 | 52 | 541 | 0.0 | 706 |
| Msa0515590 | MtrunA17_Chr1g0159811 | 78.897 | 417 | 88 | 0 | 8 | 424 | 6 | 422 | 0.0 | 699 |
| Msa0515590 | MtrunA17_Chr8g0372381 | 47.548 | 469 | 246 | 0 | 15 | 483 | 6 | 474 | 8.52e-166 | 477 |
| Msa0515590 | MtrunA17_Chr2g0328781 | 46.764 | 479 | 252 | 1 | 13 | 488 | 15 | 493 | 1.34e-159 | 462 |
| Msa0515590 | MtrunA17_Chr4g0032441 | 50.881 | 454 | 220 | 1 | 22 | 472 | 9 | 462 | 3.30e-146 | 427 |
| Msa0515590 | MtrunA17_Chr3g0129271 | 44.444 | 189 | 102 | 1 | 185 | 370 | 31 | 219 | 6.41e-51 | 174 |
| Msa0515590 | MtrunA17_Chr3g0118121 | 29.954 | 434 | 285 | 9 | 27 | 447 | 58 | 485 | 6.23e-40 | 150 |
| Msa0515590 | MtrunA17_Chr4g0059521 | 29.017 | 417 | 282 | 9 | 40 | 447 | 74 | 485 | 2.61e-39 | 149 |
| Msa0515590 | MtrunA17_Chr2g0294411 | 24.777 | 448 | 307 | 8 | 36 | 467 | 106 | 539 | 4.22e-39 | 149 |
| Msa0515590 | MtrunA17_Chr3g0118081 | 29.263 | 434 | 288 | 10 | 27 | 447 | 88 | 515 | 8.54e-38 | 145 |
| Msa0515590 | MtrunA17_Chr2g0310091 | 27.874 | 348 | 242 | 8 | 114 | 455 | 193 | 537 | 1.09e-32 | 130 |
| Msa0515590 | MtrunA17_Chr8g0365221 | 26.790 | 433 | 299 | 11 | 26 | 448 | 108 | 532 | 5.22e-30 | 123 |
| Msa0515590 | MtrunA17_Chr4g0059221 | 26.991 | 452 | 298 | 13 | 14 | 448 | 99 | 535 | 1.11e-29 | 122 |
| Msa0515590 | MtrunA17_Chr8g0390651 | 28.070 | 342 | 230 | 9 | 117 | 448 | 159 | 494 | 1.64e-27 | 115 |
| Msa0515590 | MtrunA17_Chr3g0117861 | 27.212 | 452 | 297 | 14 | 14 | 448 | 97 | 533 | 4.75e-27 | 114 |
| Msa0515590 | MtrunA17_Chr4g0074171 | 28.743 | 334 | 229 | 7 | 118 | 448 | 158 | 485 | 4.50e-26 | 110 |
| Msa0515590 | MtrunA17_Chr8g0390631 | 29.275 | 345 | 222 | 11 | 117 | 448 | 150 | 485 | 1.17e-25 | 109 |
| Msa0515590 | MtrunA17_Chr6g0485301 | 28.319 | 339 | 233 | 8 | 117 | 448 | 158 | 493 | 4.56e-25 | 108 |
| Msa0515590 | MtrunA17_Chr6g0485311 | 27.515 | 338 | 235 | 8 | 117 | 447 | 156 | 490 | 5.60e-24 | 104 |
| Msa0515590 | MtrunA17_Chr1g0149961 | 25.000 | 460 | 318 | 12 | 5 | 448 | 37 | 485 | 1.78e-23 | 103 |
| Msa0515590 | MtrunA17_Chr4g0009161 | 42.202 | 109 | 59 | 2 | 185 | 289 | 116 | 224 | 3.36e-20 | 89.4 |
| Msa0515590 | MtrunA17_Chr1g0159821 | 52.778 | 72 | 34 | 0 | 10 | 81 | 8 | 79 | 1.72e-19 | 84.3 |
| Msa0515590 | MtrunA17_Chr2g0279751 | 28.710 | 310 | 196 | 10 | 115 | 408 | 147 | 447 | 2.10e-18 | 87.8 |
| Msa0515590 | MtrunA17_Chr4g0049641 | 27.036 | 307 | 205 | 8 | 115 | 408 | 174 | 474 | 2.39e-18 | 87.8 |
| Msa0515590 | MtrunA17_Chr2g0300801 | 25.685 | 292 | 194 | 12 | 118 | 393 | 155 | 439 | 3.55e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0515590 | AT1G44170.1 | 68.058 | 479 | 153 | 0 | 10 | 488 | 4 | 482 | 0.0 | 704 |
| Msa0515590 | AT1G44170.2 | 68.058 | 479 | 153 | 0 | 10 | 488 | 4 | 482 | 0.0 | 704 |
| Msa0515590 | AT4G34240.1 | 64.644 | 478 | 169 | 0 | 13 | 490 | 70 | 547 | 0.0 | 647 |
| Msa0515590 | AT4G34240.4 | 64.644 | 478 | 169 | 0 | 13 | 490 | 55 | 532 | 0.0 | 647 |
| Msa0515590 | AT1G44170.3 | 70.560 | 411 | 121 | 0 | 78 | 488 | 9 | 419 | 0.0 | 634 |
| Msa0515590 | AT4G34240.3 | 67.574 | 404 | 131 | 0 | 87 | 490 | 2 | 405 | 0.0 | 569 |
| Msa0515590 | AT4G36250.1 | 47.609 | 460 | 238 | 1 | 16 | 472 | 6 | 465 | 1.23e-162 | 469 |
| Msa0515590 | AT4G34240.2 | 66.667 | 321 | 107 | 0 | 13 | 333 | 70 | 390 | 1.03e-150 | 436 |
| Msa0515590 | AT3G66658.1 | 27.146 | 431 | 296 | 6 | 36 | 452 | 106 | 532 | 8.79e-44 | 162 |
| Msa0515590 | AT3G66658.2 | 27.361 | 413 | 282 | 6 | 36 | 434 | 106 | 514 | 2.61e-43 | 162 |
| Msa0515590 | AT1G74920.1 | 27.571 | 457 | 304 | 12 | 15 | 449 | 37 | 488 | 4.33e-42 | 157 |
| Msa0515590 | AT1G74920.2 | 28.810 | 420 | 284 | 10 | 40 | 449 | 69 | 483 | 9.40e-42 | 156 |
| Msa0515590 | AT3G48170.1 | 27.338 | 417 | 289 | 9 | 40 | 447 | 74 | 485 | 1.27e-36 | 142 |
| Msa0515590 | AT1G79440.1 | 28.824 | 340 | 233 | 8 | 114 | 447 | 184 | 520 | 1.37e-33 | 133 |
| Msa0515590 | AT1G23800.1 | 27.455 | 448 | 301 | 13 | 14 | 448 | 89 | 525 | 1.57e-33 | 133 |
| Msa0515590 | AT3G48000.1 | 26.549 | 452 | 300 | 14 | 14 | 448 | 93 | 529 | 1.22e-28 | 119 |
| Msa0515590 | AT3G24503.1 | 27.729 | 339 | 235 | 7 | 117 | 448 | 157 | 492 | 2.63e-27 | 115 |
| Msa0515590 | AT2G24270.3 | 28.144 | 334 | 231 | 7 | 118 | 448 | 158 | 485 | 9.19e-25 | 107 |
| Msa0515590 | AT2G24270.1 | 28.144 | 334 | 231 | 7 | 118 | 448 | 158 | 485 | 9.19e-25 | 107 |
| Msa0515590 | AT2G24270.4 | 28.144 | 334 | 231 | 7 | 118 | 448 | 158 | 485 | 9.37e-25 | 107 |
| Msa0515590 | AT2G24270.2 | 28.707 | 317 | 217 | 7 | 118 | 431 | 198 | 508 | 1.15e-24 | 107 |
| Msa0515590 | AT2G14170.2 | 27.378 | 347 | 228 | 12 | 117 | 447 | 139 | 477 | 5.21e-18 | 87.0 |
| Msa0515590 | AT2G14170.1 | 27.378 | 347 | 228 | 12 | 117 | 447 | 248 | 586 | 5.52e-18 | 87.4 |
| Msa0515590 | AT1G23800.2 | 30.078 | 256 | 155 | 9 | 14 | 253 | 89 | 336 | 3.90e-17 | 84.0 |
| Msa0515590 | AT2G14170.3 | 27.273 | 308 | 203 | 10 | 115 | 408 | 246 | 546 | 1.10e-16 | 83.2 |
| Msa0515590 | AT1G54100.2 | 21.453 | 289 | 210 | 8 | 118 | 393 | 154 | 438 | 1.58e-13 | 73.2 |
| Msa0515590 | AT1G54100.1 | 21.453 | 289 | 210 | 8 | 118 | 393 | 154 | 438 | 1.58e-13 | 73.2 |
Find 130 sgRNAs with CRISPR-Local
Find 570 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCCAATTCTGTCTTTA+AGG | 0.114075 | 3_4:-66875662 | None:intergenic |
| GCTATGTTACTATTGATTTC+TGG | 0.128525 | 3_4:-66872479 | None:intergenic |
| GGGAAAATTTCATACCAATT+TGG | 0.160031 | 3_4:-66875568 | None:intergenic |
| GTTTCTGGCAAGGTTGTTTA+TGG | 0.170486 | 3_4:+66875781 | Msa0515590:CDS |
| TCACTGCTGGCGAACTTATT+AGG | 0.192129 | 3_4:+66874745 | Msa0515590:CDS |
| GGAAAATTTCATACCAATTT+GGG | 0.208738 | 3_4:-66875567 | None:intergenic |
| ACAGAATTGGAAAGCTTCTT+TGG | 0.227872 | 3_4:+66875670 | Msa0515590:CDS |
| TTGGACGACGAGAAGGTTTC+TGG | 0.237632 | 3_4:+66875766 | Msa0515590:CDS |
| TGGTTCATACTTTGCCATTT+GGG | 0.248058 | 3_4:+66876374 | Msa0515590:CDS |
| GTGGTTCATACTTTGCCATT+TGG | 0.266390 | 3_4:+66876373 | Msa0515590:CDS |
| CTATGTTACTATTGATTTCT+GGG | 0.296959 | 3_4:-66872478 | None:intergenic |
| TTTGTTGTTATAACGTAATC+AGG | 0.304335 | 3_4:-66875534 | None:intergenic |
| CACTGCTGGCGAACTTATTA+GGG | 0.310991 | 3_4:+66874746 | Msa0515590:CDS |
| GATAAATCATTGGATTCTAT+TGG | 0.315485 | 3_4:-66875700 | None:intergenic |
| TGATTTCTGGGATAATAATA+AGG | 0.317495 | 3_4:-66872466 | None:intergenic |
| ACAGCTAGACGGATAATTTC+AGG | 0.342418 | 3_4:+66875474 | Msa0515590:CDS |
| ACACCTTACACCAGTCGTTC+TGG | 0.352826 | 3_4:+66875091 | Msa0515590:CDS |
| CTAGTCGCCGGCGATGTTAC+TGG | 0.358446 | 3_4:+66876550 | Msa0515590:CDS |
| GGATTCAAATGTCAATTTAG+AGG | 0.363970 | 3_4:+66875142 | Msa0515590:CDS |
| CTGAGGGTGAGCTTTAATTC+TGG | 0.376691 | 3_4:+66872585 | Msa0515590:CDS |
| TTCTAACCACTTTGCTCGCT+TGG | 0.378374 | 3_4:+66875735 | Msa0515590:CDS |
| TGATGCCTTAAAGACAGAAT+TGG | 0.379258 | 3_4:+66875657 | Msa0515590:CDS |
| AACACTACACCAAGTGGTTC+AGG | 0.380052 | 3_4:-66874239 | None:intergenic |
| TCCAGCCTCGTCTTCACTGC+TGG | 0.400434 | 3_4:+66874732 | Msa0515590:CDS |
| TTCTGCTTTGTATCAGTGTA+AGG | 0.401680 | 3_4:-66876514 | None:intergenic |
| GGAGTTGGTGACAGTGGAAT+GGG | 0.406759 | 3_4:+66876397 | Msa0515590:CDS |
| TTGAAAACAAATTAAAGCTT+AGG | 0.408744 | 3_4:-66876599 | None:intergenic |
| TACAATAAAATCAGAACAAA+TGG | 0.409251 | 3_4:-66876649 | None:intergenic |
| GAAGATGGTTGATGAACAAC+AGG | 0.411988 | 3_4:+66872656 | Msa0515590:CDS |
| GGGAGTTGGTGACAGTGGAA+TGG | 0.415308 | 3_4:+66876396 | Msa0515590:CDS |
| CTGTCCCTTGATCCAGTTGT+TGG | 0.425314 | 3_4:+66874661 | Msa0515590:CDS |
| CACAATGCGCGATAAATCAT+TGG | 0.432655 | 3_4:-66875710 | None:intergenic |
| TACAAATGACAACAAGTTCA+AGG | 0.442505 | 3_4:+66876193 | Msa0515590:CDS |
| GCTGCTATAGCTCCAACAAC+TGG | 0.444023 | 3_4:-66874673 | None:intergenic |
| ACACCAGTCGTTCTGGAGCT+TGG | 0.446970 | 3_4:+66875098 | Msa0515590:CDS |
| ATAATGAGTGAGGAGATCTT+TGG | 0.458834 | 3_4:+66875952 | Msa0515590:CDS |
| TGCTCGCTTGGTAAAGATGT+TGG | 0.468945 | 3_4:+66875747 | Msa0515590:CDS |
| TAGCAATAGTATAAAATGTC+GGG | 0.472828 | 3_4:+66872498 | Msa0515590:exon |
| TTTGTGAAGAATGTTTCTGC+TGG | 0.473206 | 3_4:+66876221 | Msa0515590:CDS |
| GGTACTATTTCAGCTGAAGA+AGG | 0.475298 | 3_4:-66874218 | None:intergenic |
| ACAATGGATGGCCCCAGAAA+AGG | 0.476780 | 3_4:+66874060 | Msa0515590:CDS |
| ACATTTGAATCCACAACAGT+TGG | 0.479478 | 3_4:-66875131 | None:intergenic |
| GGTTGTTTATGGAGGTGAAA+AGG | 0.487907 | 3_4:+66875792 | Msa0515590:CDS |
| CTGCATTGTTGCAACAAAAG+TGG | 0.494247 | 3_4:+66874824 | Msa0515590:CDS |
| CTTGGAACAGGTGAACAAGC+TGG | 0.495328 | 3_4:+66876115 | Msa0515590:intron |
| CGGAGAAGCGGCGTCGTCGT+TGG | 0.495817 | 3_4:+66872554 | Msa0515590:CDS |
| TAGCTCCAACAACTGGATCA+AGG | 0.496212 | 3_4:-66874666 | None:intergenic |
| TGGAGCGTCTAATACAATAG+TGG | 0.501825 | 3_4:-66875917 | None:intergenic |
| GGTTCATACTTTGCCATTTG+GGG | 0.508394 | 3_4:+66876375 | Msa0515590:CDS |
| GACGGATAATTTCAGGAAAG+TGG | 0.508972 | 3_4:+66875481 | Msa0515590:CDS |
| CAGAATTAAAGCTCACCCTC+AGG | 0.511369 | 3_4:-66872584 | None:intergenic |
| TTACGGGTGATGCATCGATA+AGG | 0.514070 | 3_4:+66876485 | Msa0515590:CDS |
| GCTCCAGAACGACTGGTGTA+AGG | 0.516414 | 3_4:-66875094 | None:intergenic |
| TGAAGATCAGTCACAGAAGA+AGG | 0.516470 | 3_4:+66872521 | Msa0515590:CDS |
| GTAAATAAATATGCAGCAAG+TGG | 0.517979 | 3_4:-66876173 | None:intergenic |
| GCCAGCAGTGAAGACGAGGC+TGG | 0.518366 | 3_4:-66874733 | None:intergenic |
| AACGTAATCAGGAGAAATGC+AGG | 0.519634 | 3_4:-66875523 | None:intergenic |
| AGGAAAATCTCCAACTGTTG+TGG | 0.520349 | 3_4:+66875121 | Msa0515590:CDS |
| ATCTATAAGAGTTGTGGAGG+GGG | 0.520366 | 3_4:+66874786 | Msa0515590:CDS |
| CAGAAGAAGGTGGTGTTTGA+CGG | 0.522711 | 3_4:+66872534 | Msa0515590:CDS |
| AGCGGCGTCGTCGTTGGTGA+AGG | 0.523107 | 3_4:+66872560 | Msa0515590:CDS |
| CCTCCAAGCTCCAGAACGAC+TGG | 0.525093 | 3_4:-66875101 | None:intergenic |
| TTTGTGAGTAAAAGCGTCAA+AGG | 0.526185 | 3_4:-66876440 | None:intergenic |
| GGAAAGTGGTGCTGTAACAA+TGG | 0.528505 | 3_4:+66875495 | Msa0515590:CDS |
| CTCATCTATAAGAGTTGTGG+AGG | 0.535901 | 3_4:+66874783 | Msa0515590:CDS |
| CCAGTCGTTCTGGAGCTTGG+AGG | 0.536552 | 3_4:+66875101 | Msa0515590:CDS |
| ATAGCAATAGTATAAAATGT+CGG | 0.538437 | 3_4:+66872497 | Msa0515590:exon |
| ACAAATGGTACGGCACTAGC+AGG | 0.541440 | 3_4:-66876634 | None:intergenic |
| GTTGTTGGAGCTATAGCAGC+CGG | 0.541671 | 3_4:+66874676 | Msa0515590:CDS |
| TGCTTTGTATCAGTGTAAGG+CGG | 0.541950 | 3_4:-66876511 | None:intergenic |
| GTAAGACACGAAGTTATGAA+TGG | 0.543765 | 3_4:+66872607 | Msa0515590:CDS |
| AGCTCCAACAACTGGATCAA+GGG | 0.544547 | 3_4:-66874665 | None:intergenic |
| TCTGGCAAGGTTGTTTATGG+AGG | 0.544720 | 3_4:+66875784 | Msa0515590:CDS |
| TTATGAATGGAGAGTATCGC+AGG | 0.547189 | 3_4:+66872620 | Msa0515590:CDS |
| TACAAAGCAGAAATTGATGA+AGG | 0.548509 | 3_4:+66876525 | Msa0515590:CDS |
| TTTATTCTTACCGTGATGAT+GGG | 0.548703 | 3_4:-66875985 | None:intergenic |
| GTGAAGAATGTTTCTGCTGG+GGG | 0.549524 | 3_4:+66876224 | Msa0515590:CDS |
| TGCATTGTTGCAACAAAAGT+GGG | 0.550398 | 3_4:+66874825 | Msa0515590:CDS |
| TAGTGTTAGTCATCTCTGCT+TGG | 0.552108 | 3_4:+66874255 | Msa0515590:CDS |
| TAACTCATCTATAAGAGTTG+TGG | 0.553446 | 3_4:+66874780 | Msa0515590:CDS |
| CGACGAGAAGGTTTCTGGCA+AGG | 0.555363 | 3_4:+66875771 | Msa0515590:CDS |
| TTTCAAGCGGTGGTTTAGCA+AGG | 0.558890 | 3_4:-66872707 | None:intergenic |
| CTCATTATCAGAGAATCTTG+TGG | 0.559354 | 3_4:-66875937 | None:intergenic |
| TTGTGAAGAATGTTTCTGCT+GGG | 0.560631 | 3_4:+66876222 | Msa0515590:CDS |
| TTGATGAAGGCTCTAGTCGC+CGG | 0.564772 | 3_4:+66876538 | Msa0515590:CDS |
| GAGGCTGGAGCAATTTCTGA+TGG | 0.566074 | 3_4:-66874718 | None:intergenic |
| CGTCGTTGGTGAAGGACCTG+AGG | 0.569144 | 3_4:+66872568 | Msa0515590:CDS |
| GAAAATTTCATACCAATTTG+GGG | 0.571184 | 3_4:-66875566 | None:intergenic |
| CGCTGAAGGAATTGAAACAA+TGG | 0.574396 | 3_4:+66874044 | Msa0515590:CDS |
| GGAGCGTCTAATACAATAGT+GGG | 0.580198 | 3_4:-66875916 | None:intergenic |
| GTGGAATGGGTGCATACCAT+GGG | 0.581183 | 3_4:+66876410 | Msa0515590:CDS |
| GCTTTGTATCAGTGTAAGGC+GGG | 0.584751 | 3_4:-66876510 | None:intergenic |
| GTTCATACTTTGCCATTTGG+GGG | 0.589580 | 3_4:+66876376 | Msa0515590:CDS |
| TAAAATCAGAACAAATGGTA+CGG | 0.592527 | 3_4:-66876644 | None:intergenic |
| AAAGATGTTGGACGACGAGA+AGG | 0.593143 | 3_4:+66875759 | Msa0515590:CDS |
| GAAGGAATTGAAACAATGGA+TGG | 0.595708 | 3_4:+66874048 | Msa0515590:CDS |
| ACCGTGATGATGGGAAGCAA+TGG | 0.595840 | 3_4:-66875976 | None:intergenic |
| GGTACGGCACTAGCAGGTAT+CGG | 0.599656 | 3_4:-66876628 | None:intergenic |
| CAGGTAATGGAAAAGTGGGA+CGG | 0.603039 | 3_4:+66875045 | Msa0515590:intron |
| CTCATGTGAAGTCACGCTGA+AGG | 0.604871 | 3_4:+66874030 | Msa0515590:CDS |
| TCATCTATAAGAGTTGTGGA+GGG | 0.608439 | 3_4:+66874784 | Msa0515590:CDS |
| TTTACTAGGTTACAGCTAGA+CGG | 0.610366 | 3_4:+66875463 | Msa0515590:intron |
| AGCTTCGATTTGATCAACGC+AGG | 0.611901 | 3_4:+66876143 | Msa0515590:CDS |
| GGTGGTGTTTGACGGAGAAG+CGG | 0.613325 | 3_4:+66872542 | Msa0515590:CDS |
| TAGACAACAGTTTCAAGCGG+TGG | 0.617970 | 3_4:-66872717 | None:intergenic |
| GTCGTTGGTGAAGGACCTGA+GGG | 0.624859 | 3_4:+66872569 | Msa0515590:CDS |
| TCCATTGCTTCCCATCATCA+CGG | 0.625141 | 3_4:+66875975 | Msa0515590:CDS |
| GAACTTATTAGGGAGGTACA+TGG | 0.626641 | 3_4:+66874756 | Msa0515590:CDS |
| AAAATTTCATACCAATTTGG+GGG | 0.628857 | 3_4:-66875565 | None:intergenic |
| GTTCGCCAGCAGTGAAGACG+AGG | 0.630975 | 3_4:-66874737 | None:intergenic |
| AACAACACCAGTAACATCGC+CGG | 0.631565 | 3_4:-66876557 | None:intergenic |
| CATCTATAAGAGTTGTGGAG+GGG | 0.632599 | 3_4:+66874785 | Msa0515590:CDS |
| GAAATAGTACCTGAACCACT+TGG | 0.636077 | 3_4:+66874230 | Msa0515590:CDS |
| AGATTCTCTGATAATGAGTG+AGG | 0.639886 | 3_4:+66875942 | Msa0515590:CDS |
| ATGACTAACACTACACCAAG+TGG | 0.646296 | 3_4:-66874245 | None:intergenic |
| GAGATAAACTGAGAGCAAAG+TGG | 0.647026 | 3_4:-66872444 | None:intergenic |
| CAATGCAGTAGTTTCATCAA+CGG | 0.649582 | 3_4:-66874809 | None:intergenic |
| TGTGAAGAATGTTTCTGCTG+GGG | 0.658052 | 3_4:+66876223 | Msa0515590:CDS |
| TGCTGGCGAACTTATTAGGG+AGG | 0.664145 | 3_4:+66874749 | Msa0515590:CDS |
| AAAAGTGGGACGGATAGTGA+TGG | 0.666797 | 3_4:+66875055 | Msa0515590:CDS |
| AGTGGGACGGATAGTGATGG+CGG | 0.669702 | 3_4:+66875058 | Msa0515590:CDS |
| AGTGGAATGGGTGCATACCA+TGG | 0.672625 | 3_4:+66876409 | Msa0515590:CDS |
| TCTTTACCAAGCGAGCAAAG+TGG | 0.678259 | 3_4:-66875741 | None:intergenic |
| GCTTGAAACTGTTGTCTACG+AGG | 0.679853 | 3_4:+66872722 | Msa0515590:CDS |
| TATAGCAGCCGGAAACGCCG+TGG | 0.683688 | 3_4:+66874687 | Msa0515590:CDS |
| TCGTAGACAACAGTTTCAAG+CGG | 0.691579 | 3_4:-66872720 | None:intergenic |
| CGTCAAAGGAGAATTTCCCA+TGG | 0.693948 | 3_4:-66876426 | None:intergenic |
| ATGCATCACCCGTAAAACCA+CGG | 0.701105 | 3_4:-66876477 | None:intergenic |
| AGATCAGTCACAGAAGAAGG+TGG | 0.702169 | 3_4:+66872524 | Msa0515590:CDS |
| CAACGTAACACAGTCAACAG+AGG | 0.713171 | 3_4:+66872314 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCATATATATATGATTTTTA+TGG | + | chr3_4:66872771-66872790 | Msa0515590:intron | 10.0% |
| !!! | TTTTATGTTTTCTTTAATAA+AGG | + | chr3_4:66873006-66873025 | Msa0515590:intron | 10.0% |
| !!! | ATTCAACTTAAAATATTTTT+GGG | + | chr3_4:66873774-66873793 | Msa0515590:intron | 10.0% |
| !!! | TCATATATATATGATTTTTA+TGG | + | chr3_4:66872771-66872790 | Msa0515590:intron | 10.0% |
| !!! | TTTTATGTTTTCTTTAATAA+AGG | + | chr3_4:66873006-66873025 | Msa0515590:intron | 10.0% |
| !!! | ATTCAACTTAAAATATTTTT+GGG | + | chr3_4:66873774-66873793 | Msa0515590:intron | 10.0% |
| !!! | TAAATCTAAATCAATTTGTT+AGG | + | chr3_4:66873273-66873292 | Msa0515590:intron | 15.0% |
| !!! | GATTCAACTTAAAATATTTT+TGG | + | chr3_4:66873773-66873792 | Msa0515590:intron | 15.0% |
| !! | TAGATTATTAAAGAAACTAA+AGG | - | chr3_4:66874600-66874619 | None:intergenic | 15.0% |
| !!! | TAAAGTTAAATTGTTTTCAA+TGG | - | chr3_4:66875241-66875260 | None:intergenic | 15.0% |
| !!! | TAAATTAATTTGTGTTTACT+AGG | + | chr3_4:66875449-66875468 | Msa0515590:intron | 15.0% |
| !!! | TAAATCTAAATCAATTTGTT+AGG | + | chr3_4:66873273-66873292 | Msa0515590:intron | 15.0% |
| !!! | GATTCAACTTAAAATATTTT+TGG | + | chr3_4:66873773-66873792 | Msa0515590:intron | 15.0% |
| !! | TAGATTATTAAAGAAACTAA+AGG | - | chr3_4:66874600-66874619 | None:intergenic | 15.0% |
| !!! | TAAAGTTAAATTGTTTTCAA+TGG | - | chr3_4:66875241-66875260 | None:intergenic | 15.0% |
| !!! | TAAATTAATTTGTGTTTACT+AGG | + | chr3_4:66875449-66875468 | Msa0515590:intron | 15.0% |
| !! | ATAGCAATAGTATAAAATGT+CGG | + | chr3_4:66872497-66872516 | Msa0515590:exon | 20.0% |
| !!! | ATAAACATCATAAGTTTTCA+AGG | + | chr3_4:66872883-66872902 | Msa0515590:intron | 20.0% |
| !!! | TATTCTTGAGATTTTTCATT+TGG | + | chr3_4:66872912-66872931 | Msa0515590:intron | 20.0% |
| !!! | TATGTTTTCTTTAATAAAGG+AGG | + | chr3_4:66873009-66873028 | Msa0515590:intron | 20.0% |
| !!! | AAAGCATTTTTCTTTTTGAA+GGG | - | chr3_4:66873055-66873074 | None:intergenic | 20.0% |
| !!! | AAAAGCATTTTTCTTTTTGA+AGG | - | chr3_4:66873056-66873075 | None:intergenic | 20.0% |
| !!! | TTCACCTTCTTTTTTTTTTA+CGG | + | chr3_4:66873074-66873093 | Msa0515590:intron | 20.0% |
| !!! | TTCTGGAAAATATAAGTAAA+AGG | + | chr3_4:66873395-66873414 | Msa0515590:intron | 20.0% |
| !!! | TAAAAGGTGTATGTAAAATA+AGG | + | chr3_4:66873411-66873430 | Msa0515590:intron | 20.0% |
| !!! | AAAAGGTGTATGTAAAATAA+GGG | + | chr3_4:66873412-66873431 | Msa0515590:intron | 20.0% |
| !! | AAAAATAAACTTTGATTGAC+TGG | + | chr3_4:66873446-66873465 | Msa0515590:intron | 20.0% |
| !! | TTTAAAAATTTAGTATCCCT+TGG | + | chr3_4:66873797-66873816 | Msa0515590:intron | 20.0% |
| !!! | TATTTTGAATTTATGGAAAG+CGG | - | chr3_4:66873843-66873862 | None:intergenic | 20.0% |
| !!! | GTTACTCTATTTTGAATTTA+TGG | - | chr3_4:66873850-66873869 | None:intergenic | 20.0% |
| !! | TACAAATGTTACAAAATGTT+CGG | - | chr3_4:66873872-66873891 | None:intergenic | 20.0% |
| !!! | GTAACTAAACAAACATATTT+TGG | + | chr3_4:66873889-66873908 | Msa0515590:intron | 20.0% |
| !! | AGTTCCTTTAATAATATTTC+AGG | + | chr3_4:66874172-66874191 | Msa0515590:intron | 20.0% |
| !! | TTAGCCTGAAATATTATTAA+AGG | - | chr3_4:66874179-66874198 | None:intergenic | 20.0% |
| !! | AAGATATCGTGAAAAATTTA+TGG | - | chr3_4:66874428-66874447 | None:intergenic | 20.0% |
| !!! | TTTACCTTTTGTTATACAAA+TGG | + | chr3_4:66874469-66874488 | Msa0515590:intron | 20.0% |
| !!! | ATGGTTATGAATTGTTATTT+TGG | + | chr3_4:66874901-66874920 | Msa0515590:intron | 20.0% |
| !! | AAAATTCACAATACCAATAA+TGG | - | chr3_4:66874948-66874967 | None:intergenic | 20.0% |
| !!! | TAAGTAATTACTTGATTTTC+AGG | + | chr3_4:66875026-66875045 | Msa0515590:intron | 20.0% |
| !!! | ATTAAATTTTTCATCCAATC+AGG | + | chr3_4:66875340-66875359 | Msa0515590:intron | 20.0% |
| !! | TTAAGTCAATAATGAGTTAA+GGG | - | chr3_4:66875432-66875451 | None:intergenic | 20.0% |
| !! | TTTAAGTCAATAATGAGTTA+AGG | - | chr3_4:66875433-66875452 | None:intergenic | 20.0% |
| !!! | TTGTATCCAATTTAAAACAA+TGG | + | chr3_4:66876064-66876083 | Msa0515590:intron | 20.0% |
| !!! | TGTATCCAATTTAAAACAAT+GGG | + | chr3_4:66876065-66876084 | Msa0515590:intron | 20.0% |
| !! | TTGAAAACAAATTAAAGCTT+AGG | - | chr3_4:66876602-66876621 | None:intergenic | 20.0% |
| !! | TACAATAAAATCAGAACAAA+TGG | - | chr3_4:66876652-66876671 | None:intergenic | 20.0% |
| !!! | TAAAATAAACGTTTTAAGAG+AGG | + | chr3_4:66876710-66876729 | Msa0515590:three_prime_UTR | 20.0% |
| !! | ATAGCAATAGTATAAAATGT+CGG | + | chr3_4:66872497-66872516 | Msa0515590:exon | 20.0% |
| !!! | ATAAACATCATAAGTTTTCA+AGG | + | chr3_4:66872883-66872902 | Msa0515590:intron | 20.0% |
| !!! | TATTCTTGAGATTTTTCATT+TGG | + | chr3_4:66872912-66872931 | Msa0515590:intron | 20.0% |
| !!! | TATGTTTTCTTTAATAAAGG+AGG | + | chr3_4:66873009-66873028 | Msa0515590:intron | 20.0% |
| !!! | AAAGCATTTTTCTTTTTGAA+GGG | - | chr3_4:66873055-66873074 | None:intergenic | 20.0% |
| !!! | AAAAGCATTTTTCTTTTTGA+AGG | - | chr3_4:66873056-66873075 | None:intergenic | 20.0% |
| !!! | TTCACCTTCTTTTTTTTTTA+CGG | + | chr3_4:66873074-66873093 | Msa0515590:intron | 20.0% |
| !!! | TTCTGGAAAATATAAGTAAA+AGG | + | chr3_4:66873395-66873414 | Msa0515590:intron | 20.0% |
| !!! | TAAAAGGTGTATGTAAAATA+AGG | + | chr3_4:66873411-66873430 | Msa0515590:intron | 20.0% |
| !!! | AAAAGGTGTATGTAAAATAA+GGG | + | chr3_4:66873412-66873431 | Msa0515590:intron | 20.0% |
| !! | AAAAATAAACTTTGATTGAC+TGG | + | chr3_4:66873446-66873465 | Msa0515590:intron | 20.0% |
| !! | TTTAAAAATTTAGTATCCCT+TGG | + | chr3_4:66873797-66873816 | Msa0515590:intron | 20.0% |
| !!! | TATTTTGAATTTATGGAAAG+CGG | - | chr3_4:66873843-66873862 | None:intergenic | 20.0% |
| !!! | GTTACTCTATTTTGAATTTA+TGG | - | chr3_4:66873850-66873869 | None:intergenic | 20.0% |
| !! | TACAAATGTTACAAAATGTT+CGG | - | chr3_4:66873872-66873891 | None:intergenic | 20.0% |
| !!! | GTAACTAAACAAACATATTT+TGG | + | chr3_4:66873889-66873908 | Msa0515590:intron | 20.0% |
| !! | AGTTCCTTTAATAATATTTC+AGG | + | chr3_4:66874172-66874191 | Msa0515590:intron | 20.0% |
| !! | TTAGCCTGAAATATTATTAA+AGG | - | chr3_4:66874179-66874198 | None:intergenic | 20.0% |
| !! | AAGATATCGTGAAAAATTTA+TGG | - | chr3_4:66874428-66874447 | None:intergenic | 20.0% |
| !!! | TTTACCTTTTGTTATACAAA+TGG | + | chr3_4:66874469-66874488 | Msa0515590:intron | 20.0% |
| !!! | ATGGTTATGAATTGTTATTT+TGG | + | chr3_4:66874901-66874920 | Msa0515590:intron | 20.0% |
| !! | AAAATTCACAATACCAATAA+TGG | - | chr3_4:66874948-66874967 | None:intergenic | 20.0% |
| !!! | TAAGTAATTACTTGATTTTC+AGG | + | chr3_4:66875026-66875045 | Msa0515590:intron | 20.0% |
| !!! | ATTAAATTTTTCATCCAATC+AGG | + | chr3_4:66875340-66875359 | Msa0515590:intron | 20.0% |
| !! | TTAAGTCAATAATGAGTTAA+GGG | - | chr3_4:66875432-66875451 | None:intergenic | 20.0% |
| !! | TTTAAGTCAATAATGAGTTA+AGG | - | chr3_4:66875433-66875452 | None:intergenic | 20.0% |
| !!! | TTGTATCCAATTTAAAACAA+TGG | + | chr3_4:66876064-66876083 | Msa0515590:intron | 20.0% |
| !!! | TGTATCCAATTTAAAACAAT+GGG | + | chr3_4:66876065-66876084 | Msa0515590:intron | 20.0% |
| !! | TTGAAAACAAATTAAAGCTT+AGG | - | chr3_4:66876602-66876621 | None:intergenic | 20.0% |
| !! | TACAATAAAATCAGAACAAA+TGG | - | chr3_4:66876652-66876671 | None:intergenic | 20.0% |
| !!! | TAAAATAAACGTTTTAAGAG+AGG | + | chr3_4:66876710-66876729 | Msa0515590:three_prime_UTR | 20.0% |
| !!! | TGATTTCTGGGATAATAATA+AGG | - | chr3_4:66872469-66872488 | None:intergenic | 25.0% |
| !!! | CTATGTTACTATTGATTTCT+GGG | - | chr3_4:66872481-66872500 | None:intergenic | 25.0% |
| ! | TAGCAATAGTATAAAATGTC+GGG | + | chr3_4:66872498-66872517 | Msa0515590:exon | 25.0% |
| ! | AGCAACTTAAACATGAAATT+AGG | - | chr3_4:66872750-66872769 | None:intergenic | 25.0% |
| ! | AATCAAAGTAATTGTATCGT+CGG | - | chr3_4:66872963-66872982 | None:intergenic | 25.0% |
| ! | TAAAATATTGACGTCATACA+AGG | - | chr3_4:66872991-66873010 | None:intergenic | 25.0% |
| ! | TGTTCCGTAAAAAAAAAAGA+AGG | - | chr3_4:66873081-66873100 | None:intergenic | 25.0% |
| !!! | CATAATAAATTGGTTTGGTT+TGG | + | chr3_4:66873236-66873255 | Msa0515590:intron | 25.0% |
| ! | CACTATATATCGAAAACTAT+TGG | - | chr3_4:66873326-66873345 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACAATGAGTAGT+TGG | + | chr3_4:66873482-66873501 | Msa0515590:intron | 25.0% |
| ! | TATACTATTCTCAACTACAT+TGG | + | chr3_4:66873751-66873770 | Msa0515590:intron | 25.0% |
| ! | TAAGCCATTTGTATAACAAA+AGG | - | chr3_4:66874476-66874495 | None:intergenic | 25.0% |
| !! | ACAAAATTTTGTATACAGGT+TGG | + | chr3_4:66874848-66874867 | Msa0515590:intron | 25.0% |
| !!! | ATTACTTGATTTTCAGGTAA+TGG | + | chr3_4:66875032-66875051 | Msa0515590:intron | 25.0% |
| !!! | CAATTTAGAGGTATTGATTA+AGG | + | chr3_4:66875154-66875173 | Msa0515590:intron | 25.0% |
| ! | TTAATAAGTCAATCCAAACA+TGG | - | chr3_4:66875180-66875199 | None:intergenic | 25.0% |
| ! | TGACTGGAAAATAAAAAAGA+AGG | - | chr3_4:66875379-66875398 | None:intergenic | 25.0% |
| ! | TAAGTCAATAATGAGTTAAG+GGG | - | chr3_4:66875431-66875450 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATAACGTAATC+AGG | - | chr3_4:66875537-66875556 | None:intergenic | 25.0% |
| ! | AAAATTTCATACCAATTTGG+GGG | - | chr3_4:66875568-66875587 | None:intergenic | 25.0% |
| ! | GAAAATTTCATACCAATTTG+GGG | - | chr3_4:66875569-66875588 | None:intergenic | 25.0% |
| ! | GGAAAATTTCATACCAATTT+GGG | - | chr3_4:66875570-66875589 | None:intergenic | 25.0% |
| ! | GATAAATCATTGGATTCTAT+TGG | - | chr3_4:66875703-66875722 | None:intergenic | 25.0% |
| !! | TTTTATATACTGCAATGCAA+TGG | + | chr3_4:66875860-66875879 | Msa0515590:intron | 25.0% |
| !! | GTATCCAATTTAAAACAATG+GGG | + | chr3_4:66876066-66876085 | Msa0515590:intron | 25.0% |
| ! | ATAATACTTTCTTTCTTGCT+TGG | + | chr3_4:66876097-66876116 | Msa0515590:intron | 25.0% |
| ! | ATAAGTAACATTGCATGATA+AGG | - | chr3_4:66876327-66876346 | None:intergenic | 25.0% |
| ! | TAAAATCAGAACAAATGGTA+CGG | - | chr3_4:66876647-66876666 | None:intergenic | 25.0% |
| !!! | TGTGCTTTTTAAAAGCAAAT+TGG | + | chr3_4:66876735-66876754 | Msa0515590:three_prime_UTR | 25.0% |
| !!! | TGATTTCTGGGATAATAATA+AGG | - | chr3_4:66872469-66872488 | None:intergenic | 25.0% |
| !!! | CTATGTTACTATTGATTTCT+GGG | - | chr3_4:66872481-66872500 | None:intergenic | 25.0% |
| ! | TAGCAATAGTATAAAATGTC+GGG | + | chr3_4:66872498-66872517 | Msa0515590:exon | 25.0% |
| ! | AGCAACTTAAACATGAAATT+AGG | - | chr3_4:66872750-66872769 | None:intergenic | 25.0% |
| ! | AATCAAAGTAATTGTATCGT+CGG | - | chr3_4:66872963-66872982 | None:intergenic | 25.0% |
| ! | TAAAATATTGACGTCATACA+AGG | - | chr3_4:66872991-66873010 | None:intergenic | 25.0% |
| ! | TGTTCCGTAAAAAAAAAAGA+AGG | - | chr3_4:66873081-66873100 | None:intergenic | 25.0% |
| !!! | CATAATAAATTGGTTTGGTT+TGG | + | chr3_4:66873236-66873255 | Msa0515590:intron | 25.0% |
| ! | CACTATATATCGAAAACTAT+TGG | - | chr3_4:66873326-66873345 | None:intergenic | 25.0% |
| !!! | TGTTTTTTACAATGAGTAGT+TGG | + | chr3_4:66873482-66873501 | Msa0515590:intron | 25.0% |
| ! | TATACTATTCTCAACTACAT+TGG | + | chr3_4:66873751-66873770 | Msa0515590:intron | 25.0% |
| ! | TAAGCCATTTGTATAACAAA+AGG | - | chr3_4:66874476-66874495 | None:intergenic | 25.0% |
| !! | ACAAAATTTTGTATACAGGT+TGG | + | chr3_4:66874848-66874867 | Msa0515590:intron | 25.0% |
| !!! | ATTACTTGATTTTCAGGTAA+TGG | + | chr3_4:66875032-66875051 | Msa0515590:intron | 25.0% |
| !!! | CAATTTAGAGGTATTGATTA+AGG | + | chr3_4:66875154-66875173 | Msa0515590:intron | 25.0% |
| ! | TTAATAAGTCAATCCAAACA+TGG | - | chr3_4:66875180-66875199 | None:intergenic | 25.0% |
| ! | TGACTGGAAAATAAAAAAGA+AGG | - | chr3_4:66875379-66875398 | None:intergenic | 25.0% |
| ! | TAAGTCAATAATGAGTTAAG+GGG | - | chr3_4:66875431-66875450 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTATAACGTAATC+AGG | - | chr3_4:66875537-66875556 | None:intergenic | 25.0% |
| ! | AAAATTTCATACCAATTTGG+GGG | - | chr3_4:66875568-66875587 | None:intergenic | 25.0% |
| ! | GAAAATTTCATACCAATTTG+GGG | - | chr3_4:66875569-66875588 | None:intergenic | 25.0% |
| ! | GGAAAATTTCATACCAATTT+GGG | - | chr3_4:66875570-66875589 | None:intergenic | 25.0% |
| ! | GATAAATCATTGGATTCTAT+TGG | - | chr3_4:66875703-66875722 | None:intergenic | 25.0% |
| !! | TTTTATATACTGCAATGCAA+TGG | + | chr3_4:66875860-66875879 | Msa0515590:intron | 25.0% |
| !! | GTATCCAATTTAAAACAATG+GGG | + | chr3_4:66876066-66876085 | Msa0515590:intron | 25.0% |
| ! | ATAATACTTTCTTTCTTGCT+TGG | + | chr3_4:66876097-66876116 | Msa0515590:intron | 25.0% |
| ! | ATAAGTAACATTGCATGATA+AGG | - | chr3_4:66876327-66876346 | None:intergenic | 25.0% |
| ! | TAAAATCAGAACAAATGGTA+CGG | - | chr3_4:66876647-66876666 | None:intergenic | 25.0% |
| !!! | TGTGCTTTTTAAAAGCAAAT+TGG | + | chr3_4:66876735-66876754 | Msa0515590:three_prime_UTR | 25.0% |
| !! | GCTATGTTACTATTGATTTC+TGG | - | chr3_4:66872482-66872501 | None:intergenic | 30.0% |
| ! | ATTTGGAGTCACTATTATGA+TGG | + | chr3_4:66872929-66872948 | Msa0515590:intron | 30.0% |
| AATCACGTAAATACAAGTCA+CGG | + | chr3_4:66873139-66873158 | Msa0515590:intron | 30.0% | |
| ACTTCCTAGGCATAATAAAT+TGG | + | chr3_4:66873226-66873245 | Msa0515590:intron | 30.0% | |
| CAAACCAATTTATTATGCCT+AGG | - | chr3_4:66873233-66873252 | None:intergenic | 30.0% | |
| CTAGGCATAATAAATTGGTT+TGG | + | chr3_4:66873231-66873250 | Msa0515590:intron | 30.0% | |
| AATCCTAATAGCCATAACTT+TGG | + | chr3_4:66873525-66873544 | Msa0515590:intron | 30.0% | |
| TATTGTGTCAACCAAAGTTA+TGG | - | chr3_4:66873539-66873558 | None:intergenic | 30.0% | |
| TTAGTAAAAAGGAAAGAGGT+TGG | - | chr3_4:66873699-66873718 | None:intergenic | 30.0% | |
| CCATTTAGTAAAAAGGAAAG+AGG | - | chr3_4:66873703-66873722 | None:intergenic | 30.0% | |
| ! | CCTCTTTCCTTTTTACTAAA+TGG | + | chr3_4:66873700-66873719 | Msa0515590:intron | 30.0% |
| ATTGAGTGAAATGAAACCAA+GGG | - | chr3_4:66873816-66873835 | None:intergenic | 30.0% | |
| AATACAACTAAGCAATTGAC+AGG | + | chr3_4:66873915-66873934 | Msa0515590:intron | 30.0% | |
| !!! | ATGTACTTTGTTTTGCAGAT+TGG | + | chr3_4:66873995-66874014 | Msa0515590:intron | 30.0% |
| ! | GGTAAAATAAACCTTTTCTG+GGG | - | chr3_4:66874074-66874093 | None:intergenic | 30.0% |
| ! | GGGTAAAATAAACCTTTTCT+GGG | - | chr3_4:66874075-66874094 | None:intergenic | 30.0% |
| TAACTCAAATACAACCAACA+AGG | - | chr3_4:66874567-66874586 | None:intergenic | 30.0% | |
| TAACTCATCTATAAGAGTTG+TGG | + | chr3_4:66874780-66874799 | Msa0515590:CDS | 30.0% | |
| ! | TGGGACAAAATTTTGTATAC+AGG | + | chr3_4:66874844-66874863 | Msa0515590:CDS | 30.0% |
| !!! | ATTTTCAGGTAATGGAAAAG+TGG | + | chr3_4:66875040-66875059 | Msa0515590:intron | 30.0% |
| !!! | TTTTCAGGTAATGGAAAAGT+GGG | + | chr3_4:66875041-66875060 | Msa0515590:intron | 30.0% |
| GGATTCAAATGTCAATTTAG+AGG | + | chr3_4:66875142-66875161 | Msa0515590:CDS | 30.0% | |
| TCATATTGCTTTCATGTGTA+AGG | - | chr3_4:66875287-66875306 | None:intergenic | 30.0% | |
| TGATATAACTAGTTACTGAC+TGG | - | chr3_4:66875395-66875414 | None:intergenic | 30.0% | |
| GGGAAAATTTCATACCAATT+TGG | - | chr3_4:66875571-66875590 | None:intergenic | 30.0% | |
| ! | TTTAGAACTCTTAACAACGA+GGG | - | chr3_4:66875591-66875610 | None:intergenic | 30.0% |
| ! | ATTTAGAACTCTTAACAACG+AGG | - | chr3_4:66875592-66875611 | None:intergenic | 30.0% |
| GTCTTTGTGTATCTAATGTT+TGG | + | chr3_4:66875616-66875635 | Msa0515590:intron | 30.0% | |
| CCTACTAAACTTGAATTAAG+AGG | - | chr3_4:66875840-66875859 | None:intergenic | 30.0% | |
| ! | CCTCTTAATTCAAGTTTAGT+AGG | + | chr3_4:66875837-66875856 | Msa0515590:intron | 30.0% |
| TTTATTCTTACCGTGATGAT+GGG | - | chr3_4:66875988-66876007 | None:intergenic | 30.0% | |
| ! | TTTTATTCTTACCGTGATGA+TGG | - | chr3_4:66875989-66876008 | None:intergenic | 30.0% |
| GTAAATAAATATGCAGCAAG+TGG | - | chr3_4:66876176-66876195 | None:intergenic | 30.0% | |
| TACAAATGACAACAAGTTCA+AGG | + | chr3_4:66876193-66876212 | Msa0515590:CDS | 30.0% | |
| GATAAGGATATATGCATTCA+TGG | - | chr3_4:66876311-66876330 | None:intergenic | 30.0% | |
| TACAAAGCAGAAATTGATGA+AGG | + | chr3_4:66876525-66876544 | Msa0515590:CDS | 30.0% | |
| !! | GCTATGTTACTATTGATTTC+TGG | - | chr3_4:66872482-66872501 | None:intergenic | 30.0% |
| ! | ATTTGGAGTCACTATTATGA+TGG | + | chr3_4:66872929-66872948 | Msa0515590:intron | 30.0% |
| AATCACGTAAATACAAGTCA+CGG | + | chr3_4:66873139-66873158 | Msa0515590:intron | 30.0% | |
| ACTTCCTAGGCATAATAAAT+TGG | + | chr3_4:66873226-66873245 | Msa0515590:intron | 30.0% | |
| CAAACCAATTTATTATGCCT+AGG | - | chr3_4:66873233-66873252 | None:intergenic | 30.0% | |
| CTAGGCATAATAAATTGGTT+TGG | + | chr3_4:66873231-66873250 | Msa0515590:intron | 30.0% | |
| AATCCTAATAGCCATAACTT+TGG | + | chr3_4:66873525-66873544 | Msa0515590:intron | 30.0% | |
| TATTGTGTCAACCAAAGTTA+TGG | - | chr3_4:66873539-66873558 | None:intergenic | 30.0% | |
| TTAGTAAAAAGGAAAGAGGT+TGG | - | chr3_4:66873699-66873718 | None:intergenic | 30.0% | |
| CCATTTAGTAAAAAGGAAAG+AGG | - | chr3_4:66873703-66873722 | None:intergenic | 30.0% | |
| ! | CCTCTTTCCTTTTTACTAAA+TGG | + | chr3_4:66873700-66873719 | Msa0515590:intron | 30.0% |
| ATTGAGTGAAATGAAACCAA+GGG | - | chr3_4:66873816-66873835 | None:intergenic | 30.0% | |
| AATACAACTAAGCAATTGAC+AGG | + | chr3_4:66873915-66873934 | Msa0515590:intron | 30.0% | |
| !!! | ATGTACTTTGTTTTGCAGAT+TGG | + | chr3_4:66873995-66874014 | Msa0515590:intron | 30.0% |
| ! | GGTAAAATAAACCTTTTCTG+GGG | - | chr3_4:66874074-66874093 | None:intergenic | 30.0% |
| ! | GGGTAAAATAAACCTTTTCT+GGG | - | chr3_4:66874075-66874094 | None:intergenic | 30.0% |
| TAACTCAAATACAACCAACA+AGG | - | chr3_4:66874567-66874586 | None:intergenic | 30.0% | |
| TAACTCATCTATAAGAGTTG+TGG | + | chr3_4:66874780-66874799 | Msa0515590:CDS | 30.0% | |
| ! | TGGGACAAAATTTTGTATAC+AGG | + | chr3_4:66874844-66874863 | Msa0515590:CDS | 30.0% |
| !!! | ATTTTCAGGTAATGGAAAAG+TGG | + | chr3_4:66875040-66875059 | Msa0515590:intron | 30.0% |
| !!! | TTTTCAGGTAATGGAAAAGT+GGG | + | chr3_4:66875041-66875060 | Msa0515590:intron | 30.0% |
| GGATTCAAATGTCAATTTAG+AGG | + | chr3_4:66875142-66875161 | Msa0515590:CDS | 30.0% | |
| TCATATTGCTTTCATGTGTA+AGG | - | chr3_4:66875287-66875306 | None:intergenic | 30.0% | |
| TGATATAACTAGTTACTGAC+TGG | - | chr3_4:66875395-66875414 | None:intergenic | 30.0% | |
| GGGAAAATTTCATACCAATT+TGG | - | chr3_4:66875571-66875590 | None:intergenic | 30.0% | |
| ! | TTTAGAACTCTTAACAACGA+GGG | - | chr3_4:66875591-66875610 | None:intergenic | 30.0% |
| ! | ATTTAGAACTCTTAACAACG+AGG | - | chr3_4:66875592-66875611 | None:intergenic | 30.0% |
| GTCTTTGTGTATCTAATGTT+TGG | + | chr3_4:66875616-66875635 | Msa0515590:intron | 30.0% | |
| CCTACTAAACTTGAATTAAG+AGG | - | chr3_4:66875840-66875859 | None:intergenic | 30.0% | |
| ! | CCTCTTAATTCAAGTTTAGT+AGG | + | chr3_4:66875837-66875856 | Msa0515590:intron | 30.0% |
| TTTATTCTTACCGTGATGAT+GGG | - | chr3_4:66875988-66876007 | None:intergenic | 30.0% | |
| ! | TTTTATTCTTACCGTGATGA+TGG | - | chr3_4:66875989-66876008 | None:intergenic | 30.0% |
| GTAAATAAATATGCAGCAAG+TGG | - | chr3_4:66876176-66876195 | None:intergenic | 30.0% | |
| TACAAATGACAACAAGTTCA+AGG | + | chr3_4:66876193-66876212 | Msa0515590:CDS | 30.0% | |
| GATAAGGATATATGCATTCA+TGG | - | chr3_4:66876311-66876330 | None:intergenic | 30.0% | |
| TACAAAGCAGAAATTGATGA+AGG | + | chr3_4:66876525-66876544 | Msa0515590:CDS | 30.0% | |
| GTAAGACACGAAGTTATGAA+TGG | + | chr3_4:66872607-66872626 | Msa0515590:CDS | 35.0% | |
| AAGTAATTGTATCGTCGGAA+CGG | - | chr3_4:66872958-66872977 | None:intergenic | 35.0% | |
| AGGATGCTTCTTAAAAGACA+GGG | + | chr3_4:66873167-66873186 | Msa0515590:intron | 35.0% | |
| !! | GAAGGCGCTAATTTATTCAA+TGG | + | chr3_4:66873194-66873213 | Msa0515590:intron | 35.0% |
| ATGGAGGAATAAAACTTCCT+AGG | + | chr3_4:66873213-66873232 | Msa0515590:intron | 35.0% | |
| ! | TTGTGAGAACTAAAGTGTTC+TGG | + | chr3_4:66873378-66873397 | Msa0515590:intron | 35.0% |
| CAACCAAAGTTATGGCTATT+AGG | - | chr3_4:66873531-66873550 | None:intergenic | 35.0% | |
| GTAACTTGAAAATGCTATGC+AGG | - | chr3_4:66873611-66873630 | None:intergenic | 35.0% | |
| ! | TAATTTTAAGCACGGTCAAG+AGG | - | chr3_4:66873666-66873685 | None:intergenic | 35.0% |
| ACGGAGTCCATTTAGTAAAA+AGG | - | chr3_4:66873710-66873729 | None:intergenic | 35.0% | |
| CATTGAGTGAAATGAAACCA+AGG | - | chr3_4:66873817-66873836 | None:intergenic | 35.0% | |
| GAAGGAATTGAAACAATGGA+TGG | + | chr3_4:66874048-66874067 | Msa0515590:CDS | 35.0% | |
| ! | GGGGTAAAATAAACCTTTTC+TGG | - | chr3_4:66874076-66874095 | None:intergenic | 35.0% |
| CTGAAGGTCAACTTACAAAA+TGG | - | chr3_4:66874287-66874306 | None:intergenic | 35.0% | |
| CTAAACAGTCTCAAGAATGT+TGG | - | chr3_4:66874348-66874367 | None:intergenic | 35.0% | |
| TTAACAGAACAGAACCTTGT+TGG | + | chr3_4:66874550-66874569 | Msa0515590:intron | 35.0% | |
| !!! | TTCTGATGGTTTTAGAACCA+CGG | - | chr3_4:66874707-66874726 | None:intergenic | 35.0% |
| TCATCTATAAGAGTTGTGGA+GGG | + | chr3_4:66874784-66874803 | Msa0515590:CDS | 35.0% | |
| CAATGCAGTAGTTTCATCAA+CGG | - | chr3_4:66874812-66874831 | None:intergenic | 35.0% | |
| TGCATTGTTGCAACAAAAGT+GGG | + | chr3_4:66874825-66874844 | Msa0515590:CDS | 35.0% | |
| !! | TATCACCAGTCTGTTTTTCT+TGG | + | chr3_4:66874878-66874897 | Msa0515590:intron | 35.0% |
| !!! | TTTTGGTTTTGTCGTGCAAT+TGG | + | chr3_4:66874918-66874937 | Msa0515590:intron | 35.0% |
| TGCAATTGGTATGCCATTAT+TGG | + | chr3_4:66874932-66874951 | Msa0515590:intron | 35.0% | |
| ACATTTGAATCCACAACAGT+TGG | - | chr3_4:66875134-66875153 | None:intergenic | 35.0% | |
| !! | GTATTGATTAAGGCCATGTT+TGG | + | chr3_4:66875164-66875183 | Msa0515590:intron | 35.0% |
| ! | ATTGTTTTCAATGGCTATCC+AGG | - | chr3_4:66875232-66875251 | None:intergenic | 35.0% |
| TCAATAATGAGTTAAGGGGA+AGG | - | chr3_4:66875427-66875446 | None:intergenic | 35.0% | |
| TTTACTAGGTTACAGCTAGA+CGG | + | chr3_4:66875463-66875482 | Msa0515590:intron | 35.0% | |
| TGATGCCTTAAAGACAGAAT+TGG | + | chr3_4:66875657-66875676 | Msa0515590:CDS | 35.0% | |
| GCTTTCCAATTCTGTCTTTA+AGG | - | chr3_4:66875665-66875684 | None:intergenic | 35.0% | |
| ACAGAATTGGAAAGCTTCTT+TGG | + | chr3_4:66875670-66875689 | Msa0515590:CDS | 35.0% | |
| TCTTGACACAAGCAAATTAC+AGG | + | chr3_4:66875884-66875903 | Msa0515590:intron | 35.0% | |
| CTCATTATCAGAGAATCTTG+TGG | - | chr3_4:66875940-66875959 | None:intergenic | 35.0% | |
| ! | AGATTCTCTGATAATGAGTG+AGG | + | chr3_4:66875942-66875961 | Msa0515590:CDS | 35.0% |
| ATAATGAGTGAGGAGATCTT+TGG | + | chr3_4:66875952-66875971 | Msa0515590:CDS | 35.0% | |
| !!! | GATGCCCCATTGTTTTAAAT+TGG | - | chr3_4:66876073-66876092 | None:intergenic | 35.0% |
| ! | TTTGTGAAGAATGTTTCTGC+TGG | + | chr3_4:66876221-66876240 | Msa0515590:CDS | 35.0% |
| ! | TTGTGAAGAATGTTTCTGCT+GGG | + | chr3_4:66876222-66876241 | Msa0515590:CDS | 35.0% |
| GGATATATGCATTCATGGAA+AGG | - | chr3_4:66876306-66876325 | None:intergenic | 35.0% | |
| ! | TGGTTCATACTTTGCCATTT+GGG | + | chr3_4:66876374-66876393 | Msa0515590:CDS | 35.0% |
| !! | TTTGTGAGTAAAAGCGTCAA+AGG | - | chr3_4:66876443-66876462 | None:intergenic | 35.0% |
| ! | TGACGCTTTTACTCACAAAA+AGG | + | chr3_4:66876444-66876463 | Msa0515590:CDS | 35.0% |
| !! | AGTTCTTTACCGTGGTTTTA+CGG | + | chr3_4:66876468-66876487 | Msa0515590:CDS | 35.0% |
| TTCTGCTTTGTATCAGTGTA+AGG | - | chr3_4:66876517-66876536 | None:intergenic | 35.0% | |
| GTAAGACACGAAGTTATGAA+TGG | + | chr3_4:66872607-66872626 | Msa0515590:CDS | 35.0% | |
| AAGTAATTGTATCGTCGGAA+CGG | - | chr3_4:66872958-66872977 | None:intergenic | 35.0% | |
| AGGATGCTTCTTAAAAGACA+GGG | + | chr3_4:66873167-66873186 | Msa0515590:intron | 35.0% | |
| !! | GAAGGCGCTAATTTATTCAA+TGG | + | chr3_4:66873194-66873213 | Msa0515590:intron | 35.0% |
| ATGGAGGAATAAAACTTCCT+AGG | + | chr3_4:66873213-66873232 | Msa0515590:intron | 35.0% | |
| ! | TTGTGAGAACTAAAGTGTTC+TGG | + | chr3_4:66873378-66873397 | Msa0515590:intron | 35.0% |
| CAACCAAAGTTATGGCTATT+AGG | - | chr3_4:66873531-66873550 | None:intergenic | 35.0% | |
| GTAACTTGAAAATGCTATGC+AGG | - | chr3_4:66873611-66873630 | None:intergenic | 35.0% | |
| ! | TAATTTTAAGCACGGTCAAG+AGG | - | chr3_4:66873666-66873685 | None:intergenic | 35.0% |
| ACGGAGTCCATTTAGTAAAA+AGG | - | chr3_4:66873710-66873729 | None:intergenic | 35.0% | |
| CATTGAGTGAAATGAAACCA+AGG | - | chr3_4:66873817-66873836 | None:intergenic | 35.0% | |
| GAAGGAATTGAAACAATGGA+TGG | + | chr3_4:66874048-66874067 | Msa0515590:CDS | 35.0% | |
| ! | GGGGTAAAATAAACCTTTTC+TGG | - | chr3_4:66874076-66874095 | None:intergenic | 35.0% |
| CTGAAGGTCAACTTACAAAA+TGG | - | chr3_4:66874287-66874306 | None:intergenic | 35.0% | |
| CTAAACAGTCTCAAGAATGT+TGG | - | chr3_4:66874348-66874367 | None:intergenic | 35.0% | |
| TTAACAGAACAGAACCTTGT+TGG | + | chr3_4:66874550-66874569 | Msa0515590:intron | 35.0% | |
| !!! | TTCTGATGGTTTTAGAACCA+CGG | - | chr3_4:66874707-66874726 | None:intergenic | 35.0% |
| TCATCTATAAGAGTTGTGGA+GGG | + | chr3_4:66874784-66874803 | Msa0515590:CDS | 35.0% | |
| CAATGCAGTAGTTTCATCAA+CGG | - | chr3_4:66874812-66874831 | None:intergenic | 35.0% | |
| TGCATTGTTGCAACAAAAGT+GGG | + | chr3_4:66874825-66874844 | Msa0515590:CDS | 35.0% | |
| !! | TATCACCAGTCTGTTTTTCT+TGG | + | chr3_4:66874878-66874897 | Msa0515590:intron | 35.0% |
| !!! | TTTTGGTTTTGTCGTGCAAT+TGG | + | chr3_4:66874918-66874937 | Msa0515590:intron | 35.0% |
| TGCAATTGGTATGCCATTAT+TGG | + | chr3_4:66874932-66874951 | Msa0515590:intron | 35.0% | |
| ACATTTGAATCCACAACAGT+TGG | - | chr3_4:66875134-66875153 | None:intergenic | 35.0% | |
| !! | GTATTGATTAAGGCCATGTT+TGG | + | chr3_4:66875164-66875183 | Msa0515590:intron | 35.0% |
| ! | ATTGTTTTCAATGGCTATCC+AGG | - | chr3_4:66875232-66875251 | None:intergenic | 35.0% |
| TCAATAATGAGTTAAGGGGA+AGG | - | chr3_4:66875427-66875446 | None:intergenic | 35.0% | |
| TTTACTAGGTTACAGCTAGA+CGG | + | chr3_4:66875463-66875482 | Msa0515590:intron | 35.0% | |
| TGATGCCTTAAAGACAGAAT+TGG | + | chr3_4:66875657-66875676 | Msa0515590:CDS | 35.0% | |
| GCTTTCCAATTCTGTCTTTA+AGG | - | chr3_4:66875665-66875684 | None:intergenic | 35.0% | |
| ACAGAATTGGAAAGCTTCTT+TGG | + | chr3_4:66875670-66875689 | Msa0515590:CDS | 35.0% | |
| TCTTGACACAAGCAAATTAC+AGG | + | chr3_4:66875884-66875903 | Msa0515590:intron | 35.0% | |
| CTCATTATCAGAGAATCTTG+TGG | - | chr3_4:66875940-66875959 | None:intergenic | 35.0% | |
| ! | AGATTCTCTGATAATGAGTG+AGG | + | chr3_4:66875942-66875961 | Msa0515590:CDS | 35.0% |
| ATAATGAGTGAGGAGATCTT+TGG | + | chr3_4:66875952-66875971 | Msa0515590:CDS | 35.0% | |
| !!! | GATGCCCCATTGTTTTAAAT+TGG | - | chr3_4:66876073-66876092 | None:intergenic | 35.0% |
| ! | TTTGTGAAGAATGTTTCTGC+TGG | + | chr3_4:66876221-66876240 | Msa0515590:CDS | 35.0% |
| ! | TTGTGAAGAATGTTTCTGCT+GGG | + | chr3_4:66876222-66876241 | Msa0515590:CDS | 35.0% |
| GGATATATGCATTCATGGAA+AGG | - | chr3_4:66876306-66876325 | None:intergenic | 35.0% | |
| ! | TGGTTCATACTTTGCCATTT+GGG | + | chr3_4:66876374-66876393 | Msa0515590:CDS | 35.0% |
| !! | TTTGTGAGTAAAAGCGTCAA+AGG | - | chr3_4:66876443-66876462 | None:intergenic | 35.0% |
| ! | TGACGCTTTTACTCACAAAA+AGG | + | chr3_4:66876444-66876463 | Msa0515590:CDS | 35.0% |
| !! | AGTTCTTTACCGTGGTTTTA+CGG | + | chr3_4:66876468-66876487 | Msa0515590:CDS | 35.0% |
| TTCTGCTTTGTATCAGTGTA+AGG | - | chr3_4:66876517-66876536 | None:intergenic | 35.0% | |
| GAGAGCAGAGTGGAAATATT+TGG | - | chr3_4:66872397-66872416 | None:intergenic | 40.0% | |
| GAGATAAACTGAGAGCAAAG+TGG | - | chr3_4:66872447-66872466 | None:intergenic | 40.0% | |
| TGAAGATCAGTCACAGAAGA+AGG | + | chr3_4:66872521-66872540 | Msa0515590:CDS | 40.0% | |
| !! | TTATGAATGGAGAGTATCGC+AGG | + | chr3_4:66872620-66872639 | Msa0515590:CDS | 40.0% |
| !! | GGTGAAAGCTCTTTTGAAGA+TGG | + | chr3_4:66872641-66872660 | Msa0515590:CDS | 40.0% |
| !! | GAAGATGGTTGATGAACAAC+AGG | + | chr3_4:66872656-66872675 | Msa0515590:CDS | 40.0% |
| TCGTAGACAACAGTTTCAAG+CGG | - | chr3_4:66872723-66872742 | None:intergenic | 40.0% | |
| AAATACAAGTCACGGAAACC+AGG | + | chr3_4:66873147-66873166 | Msa0515590:intron | 40.0% | |
| !!! | CTGTCTTTTAAGAAGCATCC+TGG | - | chr3_4:66873168-66873187 | None:intergenic | 40.0% |
| CAGGATGCTTCTTAAAAGAC+AGG | + | chr3_4:66873166-66873185 | Msa0515590:intron | 40.0% | |
| CTTAAAAGACAGGGACAAGA+AGG | + | chr3_4:66873176-66873195 | Msa0515590:intron | 40.0% | |
| GGCGCTAATTTATTCAATGG+AGG | + | chr3_4:66873197-66873216 | Msa0515590:intron | 40.0% | |
| TGAAAATGCTATGCAGGCAT+TGG | - | chr3_4:66873605-66873624 | None:intergenic | 40.0% | |
| ! | TAGGCGGCTAATTTTAAGCA+CGG | - | chr3_4:66873674-66873693 | None:intergenic | 40.0% |
| AAAAGGAAAGAGGTTGGACT+AGG | - | chr3_4:66873693-66873712 | None:intergenic | 40.0% | |
| ! | CGAGTTTTTCTCAACTGCTA+CGG | - | chr3_4:66873729-66873748 | None:intergenic | 40.0% |
| CGTAGCAGTTGAGAAAAACT+CGG | + | chr3_4:66873727-66873746 | Msa0515590:intron | 40.0% | |
| GTACATCAGTGAAGAGTAGA+AGG | - | chr3_4:66873981-66874000 | None:intergenic | 40.0% | |
| CGCTGAAGGAATTGAAACAA+TGG | + | chr3_4:66874044-66874063 | Msa0515590:CDS | 40.0% | |
| CTTCTCAGCTGAAGAAATTG+GGG | - | chr3_4:66874095-66874114 | None:intergenic | 40.0% | |
| CCTTCTCAGCTGAAGAAATT+GGG | - | chr3_4:66874096-66874115 | None:intergenic | 40.0% | |
| TCCTTCTCAGCTGAAGAAAT+TGG | - | chr3_4:66874097-66874116 | None:intergenic | 40.0% | |
| GGTACTATTTCAGCTGAAGA+AGG | - | chr3_4:66874221-66874240 | None:intergenic | 40.0% | |
| GAAATAGTACCTGAACCACT+TGG | + | chr3_4:66874230-66874249 | Msa0515590:CDS | 40.0% | |
| ATGACTAACACTACACCAAG+TGG | - | chr3_4:66874248-66874267 | None:intergenic | 40.0% | |
| TAGTGTTAGTCATCTCTGCT+TGG | + | chr3_4:66874255-66874274 | Msa0515590:CDS | 40.0% | |
| AAGTTGACCTTCAGCATGAT+TGG | + | chr3_4:66874293-66874312 | Msa0515590:intron | 40.0% | |
| AGTCAAACCAATCATGCTGA+AGG | - | chr3_4:66874303-66874322 | None:intergenic | 40.0% | |
| ! | GAACTTATTAGGGAGGTACA+TGG | + | chr3_4:66874756-66874775 | Msa0515590:CDS | 40.0% |
| CTCATCTATAAGAGTTGTGG+AGG | + | chr3_4:66874783-66874802 | Msa0515590:CDS | 40.0% | |
| CATCTATAAGAGTTGTGGAG+GGG | + | chr3_4:66874785-66874804 | Msa0515590:CDS | 40.0% | |
| ATCTATAAGAGTTGTGGAGG+GGG | + | chr3_4:66874786-66874805 | Msa0515590:CDS | 40.0% | |
| CTGCATTGTTGCAACAAAAG+TGG | + | chr3_4:66874824-66874843 | Msa0515590:CDS | 40.0% | |
| !! | ACCAGTCTGTTTTTCTTGGA+TGG | + | chr3_4:66874882-66874901 | Msa0515590:intron | 40.0% |
| ACCATCCAAGAAAAACAGAC+TGG | - | chr3_4:66874886-66874905 | None:intergenic | 40.0% | |
| AGGAAAATCTCCAACTGTTG+TGG | + | chr3_4:66875121-66875140 | Msa0515590:CDS | 40.0% | |
| ! | GTTATTTCCTTCAGTTCTCC+TGG | + | chr3_4:66875211-66875230 | Msa0515590:intron | 40.0% |
| GCTAAGACTTAGAACCTGAT+TGG | - | chr3_4:66875357-66875376 | None:intergenic | 40.0% | |
| ACAGCTAGACGGATAATTTC+AGG | + | chr3_4:66875474-66875493 | Msa0515590:CDS | 40.0% | |
| GACGGATAATTTCAGGAAAG+TGG | + | chr3_4:66875481-66875500 | Msa0515590:CDS | 40.0% | |
| AACGTAATCAGGAGAAATGC+AGG | - | chr3_4:66875526-66875545 | None:intergenic | 40.0% | |
| AAAAGACTTTGCCCCCAAAT+TGG | + | chr3_4:66875554-66875573 | Msa0515590:CDS | 40.0% | |
| CACAATGCGCGATAAATCAT+TGG | - | chr3_4:66875713-66875732 | None:intergenic | 40.0% | |
| !! | GTTTCTGGCAAGGTTGTTTA+TGG | + | chr3_4:66875781-66875800 | Msa0515590:CDS | 40.0% |
| GGTTGTTTATGGAGGTGAAA+AGG | + | chr3_4:66875792-66875811 | Msa0515590:CDS | 40.0% | |
| TGACACAAGCAAATTACAGG+AGG | + | chr3_4:66875887-66875906 | Msa0515590:intron | 40.0% | |
| ! | GGAGCGTCTAATACAATAGT+GGG | - | chr3_4:66875919-66875938 | None:intergenic | 40.0% |
| ! | TGGAGCGTCTAATACAATAG+TGG | - | chr3_4:66875920-66875939 | None:intergenic | 40.0% |
| CTTTCTTTCTTGCTTGGAAC+AGG | + | chr3_4:66876103-66876122 | Msa0515590:intron | 40.0% | |
| ! | TGTGAAGAATGTTTCTGCTG+GGG | + | chr3_4:66876223-66876242 | Msa0515590:CDS | 40.0% |
| GTGGTTCATACTTTGCCATT+TGG | + | chr3_4:66876373-66876392 | Msa0515590:CDS | 40.0% | |
| ! | GGTTCATACTTTGCCATTTG+GGG | + | chr3_4:66876375-66876394 | Msa0515590:CDS | 40.0% |
| ! | GTTCATACTTTGCCATTTGG+GGG | + | chr3_4:66876376-66876395 | Msa0515590:CDS | 40.0% |
| AAAAAGGCAGTTCTTTACCG+TGG | + | chr3_4:66876460-66876479 | Msa0515590:CDS | 40.0% | |
| !! | GTTCTTTACCGTGGTTTTAC+GGG | + | chr3_4:66876469-66876488 | Msa0515590:CDS | 40.0% |
| TGCTTTGTATCAGTGTAAGG+CGG | - | chr3_4:66876514-66876533 | None:intergenic | 40.0% | |
| ! | TTGTTCGTGCTCTTTTTGGA+TGG | + | chr3_4:66876575-66876594 | Msa0515590:CDS | 40.0% |
| GAGAGCAGAGTGGAAATATT+TGG | - | chr3_4:66872397-66872416 | None:intergenic | 40.0% | |
| GAGATAAACTGAGAGCAAAG+TGG | - | chr3_4:66872447-66872466 | None:intergenic | 40.0% | |
| TGAAGATCAGTCACAGAAGA+AGG | + | chr3_4:66872521-66872540 | Msa0515590:CDS | 40.0% | |
| !! | TTATGAATGGAGAGTATCGC+AGG | + | chr3_4:66872620-66872639 | Msa0515590:CDS | 40.0% |
| !! | GGTGAAAGCTCTTTTGAAGA+TGG | + | chr3_4:66872641-66872660 | Msa0515590:CDS | 40.0% |
| !! | GAAGATGGTTGATGAACAAC+AGG | + | chr3_4:66872656-66872675 | Msa0515590:CDS | 40.0% |
| TCGTAGACAACAGTTTCAAG+CGG | - | chr3_4:66872723-66872742 | None:intergenic | 40.0% | |
| AAATACAAGTCACGGAAACC+AGG | + | chr3_4:66873147-66873166 | Msa0515590:intron | 40.0% | |
| !!! | CTGTCTTTTAAGAAGCATCC+TGG | - | chr3_4:66873168-66873187 | None:intergenic | 40.0% |
| CAGGATGCTTCTTAAAAGAC+AGG | + | chr3_4:66873166-66873185 | Msa0515590:intron | 40.0% | |
| CTTAAAAGACAGGGACAAGA+AGG | + | chr3_4:66873176-66873195 | Msa0515590:intron | 40.0% | |
| GGCGCTAATTTATTCAATGG+AGG | + | chr3_4:66873197-66873216 | Msa0515590:intron | 40.0% | |
| TGAAAATGCTATGCAGGCAT+TGG | - | chr3_4:66873605-66873624 | None:intergenic | 40.0% | |
| ! | TAGGCGGCTAATTTTAAGCA+CGG | - | chr3_4:66873674-66873693 | None:intergenic | 40.0% |
| AAAAGGAAAGAGGTTGGACT+AGG | - | chr3_4:66873693-66873712 | None:intergenic | 40.0% | |
| ! | CGAGTTTTTCTCAACTGCTA+CGG | - | chr3_4:66873729-66873748 | None:intergenic | 40.0% |
| CGTAGCAGTTGAGAAAAACT+CGG | + | chr3_4:66873727-66873746 | Msa0515590:intron | 40.0% | |
| GTACATCAGTGAAGAGTAGA+AGG | - | chr3_4:66873981-66874000 | None:intergenic | 40.0% | |
| CGCTGAAGGAATTGAAACAA+TGG | + | chr3_4:66874044-66874063 | Msa0515590:CDS | 40.0% | |
| CTTCTCAGCTGAAGAAATTG+GGG | - | chr3_4:66874095-66874114 | None:intergenic | 40.0% | |
| CCTTCTCAGCTGAAGAAATT+GGG | - | chr3_4:66874096-66874115 | None:intergenic | 40.0% | |
| TCCTTCTCAGCTGAAGAAAT+TGG | - | chr3_4:66874097-66874116 | None:intergenic | 40.0% | |
| GGTACTATTTCAGCTGAAGA+AGG | - | chr3_4:66874221-66874240 | None:intergenic | 40.0% | |
| GAAATAGTACCTGAACCACT+TGG | + | chr3_4:66874230-66874249 | Msa0515590:CDS | 40.0% | |
| ATGACTAACACTACACCAAG+TGG | - | chr3_4:66874248-66874267 | None:intergenic | 40.0% | |
| TAGTGTTAGTCATCTCTGCT+TGG | + | chr3_4:66874255-66874274 | Msa0515590:CDS | 40.0% | |
| AAGTTGACCTTCAGCATGAT+TGG | + | chr3_4:66874293-66874312 | Msa0515590:intron | 40.0% | |
| AGTCAAACCAATCATGCTGA+AGG | - | chr3_4:66874303-66874322 | None:intergenic | 40.0% | |
| ! | GAACTTATTAGGGAGGTACA+TGG | + | chr3_4:66874756-66874775 | Msa0515590:CDS | 40.0% |
| CTCATCTATAAGAGTTGTGG+AGG | + | chr3_4:66874783-66874802 | Msa0515590:CDS | 40.0% | |
| CATCTATAAGAGTTGTGGAG+GGG | + | chr3_4:66874785-66874804 | Msa0515590:CDS | 40.0% | |
| ATCTATAAGAGTTGTGGAGG+GGG | + | chr3_4:66874786-66874805 | Msa0515590:CDS | 40.0% | |
| CTGCATTGTTGCAACAAAAG+TGG | + | chr3_4:66874824-66874843 | Msa0515590:CDS | 40.0% | |
| !! | ACCAGTCTGTTTTTCTTGGA+TGG | + | chr3_4:66874882-66874901 | Msa0515590:intron | 40.0% |
| ACCATCCAAGAAAAACAGAC+TGG | - | chr3_4:66874886-66874905 | None:intergenic | 40.0% | |
| AGGAAAATCTCCAACTGTTG+TGG | + | chr3_4:66875121-66875140 | Msa0515590:CDS | 40.0% | |
| ! | GTTATTTCCTTCAGTTCTCC+TGG | + | chr3_4:66875211-66875230 | Msa0515590:intron | 40.0% |
| GCTAAGACTTAGAACCTGAT+TGG | - | chr3_4:66875357-66875376 | None:intergenic | 40.0% | |
| ACAGCTAGACGGATAATTTC+AGG | + | chr3_4:66875474-66875493 | Msa0515590:CDS | 40.0% | |
| GACGGATAATTTCAGGAAAG+TGG | + | chr3_4:66875481-66875500 | Msa0515590:CDS | 40.0% | |
| AACGTAATCAGGAGAAATGC+AGG | - | chr3_4:66875526-66875545 | None:intergenic | 40.0% | |
| AAAAGACTTTGCCCCCAAAT+TGG | + | chr3_4:66875554-66875573 | Msa0515590:CDS | 40.0% | |
| CACAATGCGCGATAAATCAT+TGG | - | chr3_4:66875713-66875732 | None:intergenic | 40.0% | |
| !! | GTTTCTGGCAAGGTTGTTTA+TGG | + | chr3_4:66875781-66875800 | Msa0515590:CDS | 40.0% |
| GGTTGTTTATGGAGGTGAAA+AGG | + | chr3_4:66875792-66875811 | Msa0515590:CDS | 40.0% | |
| TGACACAAGCAAATTACAGG+AGG | + | chr3_4:66875887-66875906 | Msa0515590:intron | 40.0% | |
| ! | GGAGCGTCTAATACAATAGT+GGG | - | chr3_4:66875919-66875938 | None:intergenic | 40.0% |
| ! | TGGAGCGTCTAATACAATAG+TGG | - | chr3_4:66875920-66875939 | None:intergenic | 40.0% |
| CTTTCTTTCTTGCTTGGAAC+AGG | + | chr3_4:66876103-66876122 | Msa0515590:intron | 40.0% | |
| ! | TGTGAAGAATGTTTCTGCTG+GGG | + | chr3_4:66876223-66876242 | Msa0515590:CDS | 40.0% |
| GTGGTTCATACTTTGCCATT+TGG | + | chr3_4:66876373-66876392 | Msa0515590:CDS | 40.0% | |
| ! | GGTTCATACTTTGCCATTTG+GGG | + | chr3_4:66876375-66876394 | Msa0515590:CDS | 40.0% |
| ! | GTTCATACTTTGCCATTTGG+GGG | + | chr3_4:66876376-66876395 | Msa0515590:CDS | 40.0% |
| AAAAAGGCAGTTCTTTACCG+TGG | + | chr3_4:66876460-66876479 | Msa0515590:CDS | 40.0% | |
| !! | GTTCTTTACCGTGGTTTTAC+GGG | + | chr3_4:66876469-66876488 | Msa0515590:CDS | 40.0% |
| TGCTTTGTATCAGTGTAAGG+CGG | - | chr3_4:66876514-66876533 | None:intergenic | 40.0% | |
| ! | TTGTTCGTGCTCTTTTTGGA+TGG | + | chr3_4:66876575-66876594 | Msa0515590:CDS | 40.0% |
| AGATCAGTCACAGAAGAAGG+TGG | + | chr3_4:66872524-66872543 | Msa0515590:CDS | 45.0% | |
| CAGAAGAAGGTGGTGTTTGA+CGG | + | chr3_4:66872534-66872553 | Msa0515590:CDS | 45.0% | |
| CAGAATTAAAGCTCACCCTC+AGG | - | chr3_4:66872587-66872606 | None:intergenic | 45.0% | |
| ! | CTGAGGGTGAGCTTTAATTC+TGG | + | chr3_4:66872585-66872604 | Msa0515590:CDS | 45.0% |
| TTTCAAGCGGTGGTTTAGCA+AGG | - | chr3_4:66872710-66872729 | None:intergenic | 45.0% | |
| TAGACAACAGTTTCAAGCGG+TGG | - | chr3_4:66872720-66872739 | None:intergenic | 45.0% | |
| GCTTGAAACTGTTGTCTACG+AGG | + | chr3_4:66872722-66872741 | Msa0515590:CDS | 45.0% | |
| TGCGTATTAGTGTGAGACTG+TGG | + | chr3_4:66873575-66873594 | Msa0515590:intron | 45.0% | |
| AGTTACTCGCGAAATTCGCA+TGG | + | chr3_4:66873625-66873644 | Msa0515590:intron | 45.0% | |
| CCCAATTTCTTCAGCTGAGA+AGG | + | chr3_4:66874093-66874112 | Msa0515590:intron | 45.0% | |
| AACACTACACCAAGTGGTTC+AGG | - | chr3_4:66874242-66874261 | None:intergenic | 45.0% | |
| AGCTCCAACAACTGGATCAA+GGG | - | chr3_4:66874668-66874687 | None:intergenic | 45.0% | |
| TAGCTCCAACAACTGGATCA+AGG | - | chr3_4:66874669-66874688 | None:intergenic | 45.0% | |
| !!! | TTTTAGAACCACGGCGTTTC+CGG | - | chr3_4:66874698-66874717 | None:intergenic | 45.0% |
| TCACTGCTGGCGAACTTATT+AGG | + | chr3_4:66874745-66874764 | Msa0515590:CDS | 45.0% | |
| CACTGCTGGCGAACTTATTA+GGG | + | chr3_4:66874746-66874765 | Msa0515590:CDS | 45.0% | |
| !! | CAGGTAATGGAAAAGTGGGA+CGG | + | chr3_4:66875045-66875064 | Msa0515590:intron | 45.0% |
| AAAAGTGGGACGGATAGTGA+TGG | + | chr3_4:66875055-66875074 | Msa0515590:CDS | 45.0% | |
| !! | GGAAAGTGGTGCTGTAACAA+TGG | + | chr3_4:66875495-66875514 | Msa0515590:CDS | 45.0% |
| !! | CTGTCTTTAAGGCATCAACC+TGG | - | chr3_4:66875654-66875673 | None:intergenic | 45.0% |
| TTCTAACCACTTTGCTCGCT+TGG | + | chr3_4:66875735-66875754 | Msa0515590:CDS | 45.0% | |
| TCTTTACCAAGCGAGCAAAG+TGG | - | chr3_4:66875744-66875763 | None:intergenic | 45.0% | |
| TGCTCGCTTGGTAAAGATGT+TGG | + | chr3_4:66875747-66875766 | Msa0515590:CDS | 45.0% | |
| AAAGATGTTGGACGACGAGA+AGG | + | chr3_4:66875759-66875778 | Msa0515590:CDS | 45.0% | |
| TCTGGCAAGGTTGTTTATGG+AGG | + | chr3_4:66875784-66875803 | Msa0515590:CDS | 45.0% | |
| TCCATTGCTTCCCATCATCA+CGG | + | chr3_4:66875975-66875994 | Msa0515590:CDS | 45.0% | |
| ! | AGCTTCGATTTGATCAACGC+AGG | + | chr3_4:66876143-66876162 | Msa0515590:CDS | 45.0% |
| ! | GTGAAGAATGTTTCTGCTGG+GGG | + | chr3_4:66876224-66876243 | Msa0515590:CDS | 45.0% |
| TATGAACCACAAGCTGCACA+AGG | - | chr3_4:66876363-66876382 | None:intergenic | 45.0% | |
| CGTCAAAGGAGAATTTCCCA+TGG | - | chr3_4:66876429-66876448 | None:intergenic | 45.0% | |
| ATGCATCACCCGTAAAACCA+CGG | - | chr3_4:66876480-66876499 | None:intergenic | 45.0% | |
| ! | TTACGGGTGATGCATCGATA+AGG | + | chr3_4:66876485-66876504 | Msa0515590:CDS | 45.0% |
| GCTTTGTATCAGTGTAAGGC+GGG | - | chr3_4:66876513-66876532 | None:intergenic | 45.0% | |
| AACAACACCAGTAACATCGC+CGG | - | chr3_4:66876560-66876579 | None:intergenic | 45.0% | |
| !!! | GGTGTTGTTCGTGCTCTTTT+TGG | + | chr3_4:66876571-66876590 | Msa0515590:CDS | 45.0% |
| AGATCAGTCACAGAAGAAGG+TGG | + | chr3_4:66872524-66872543 | Msa0515590:CDS | 45.0% | |
| CAGAAGAAGGTGGTGTTTGA+CGG | + | chr3_4:66872534-66872553 | Msa0515590:CDS | 45.0% | |
| CAGAATTAAAGCTCACCCTC+AGG | - | chr3_4:66872587-66872606 | None:intergenic | 45.0% | |
| ! | CTGAGGGTGAGCTTTAATTC+TGG | + | chr3_4:66872585-66872604 | Msa0515590:CDS | 45.0% |
| TTTCAAGCGGTGGTTTAGCA+AGG | - | chr3_4:66872710-66872729 | None:intergenic | 45.0% | |
| TAGACAACAGTTTCAAGCGG+TGG | - | chr3_4:66872720-66872739 | None:intergenic | 45.0% | |
| GCTTGAAACTGTTGTCTACG+AGG | + | chr3_4:66872722-66872741 | Msa0515590:CDS | 45.0% | |
| TGCGTATTAGTGTGAGACTG+TGG | + | chr3_4:66873575-66873594 | Msa0515590:intron | 45.0% | |
| AGTTACTCGCGAAATTCGCA+TGG | + | chr3_4:66873625-66873644 | Msa0515590:intron | 45.0% | |
| CCCAATTTCTTCAGCTGAGA+AGG | + | chr3_4:66874093-66874112 | Msa0515590:intron | 45.0% | |
| AACACTACACCAAGTGGTTC+AGG | - | chr3_4:66874242-66874261 | None:intergenic | 45.0% | |
| AGCTCCAACAACTGGATCAA+GGG | - | chr3_4:66874668-66874687 | None:intergenic | 45.0% | |
| TAGCTCCAACAACTGGATCA+AGG | - | chr3_4:66874669-66874688 | None:intergenic | 45.0% | |
| !!! | TTTTAGAACCACGGCGTTTC+CGG | - | chr3_4:66874698-66874717 | None:intergenic | 45.0% |
| TCACTGCTGGCGAACTTATT+AGG | + | chr3_4:66874745-66874764 | Msa0515590:CDS | 45.0% | |
| CACTGCTGGCGAACTTATTA+GGG | + | chr3_4:66874746-66874765 | Msa0515590:CDS | 45.0% | |
| !! | CAGGTAATGGAAAAGTGGGA+CGG | + | chr3_4:66875045-66875064 | Msa0515590:intron | 45.0% |
| AAAAGTGGGACGGATAGTGA+TGG | + | chr3_4:66875055-66875074 | Msa0515590:CDS | 45.0% | |
| !! | GGAAAGTGGTGCTGTAACAA+TGG | + | chr3_4:66875495-66875514 | Msa0515590:CDS | 45.0% |
| !! | CTGTCTTTAAGGCATCAACC+TGG | - | chr3_4:66875654-66875673 | None:intergenic | 45.0% |
| TTCTAACCACTTTGCTCGCT+TGG | + | chr3_4:66875735-66875754 | Msa0515590:CDS | 45.0% | |
| TCTTTACCAAGCGAGCAAAG+TGG | - | chr3_4:66875744-66875763 | None:intergenic | 45.0% | |
| TGCTCGCTTGGTAAAGATGT+TGG | + | chr3_4:66875747-66875766 | Msa0515590:CDS | 45.0% | |
| AAAGATGTTGGACGACGAGA+AGG | + | chr3_4:66875759-66875778 | Msa0515590:CDS | 45.0% | |
| TCTGGCAAGGTTGTTTATGG+AGG | + | chr3_4:66875784-66875803 | Msa0515590:CDS | 45.0% | |
| TCCATTGCTTCCCATCATCA+CGG | + | chr3_4:66875975-66875994 | Msa0515590:CDS | 45.0% | |
| ! | AGCTTCGATTTGATCAACGC+AGG | + | chr3_4:66876143-66876162 | Msa0515590:CDS | 45.0% |
| ! | GTGAAGAATGTTTCTGCTGG+GGG | + | chr3_4:66876224-66876243 | Msa0515590:CDS | 45.0% |
| TATGAACCACAAGCTGCACA+AGG | - | chr3_4:66876363-66876382 | None:intergenic | 45.0% | |
| CGTCAAAGGAGAATTTCCCA+TGG | - | chr3_4:66876429-66876448 | None:intergenic | 45.0% | |
| ATGCATCACCCGTAAAACCA+CGG | - | chr3_4:66876480-66876499 | None:intergenic | 45.0% | |
| ! | TTACGGGTGATGCATCGATA+AGG | + | chr3_4:66876485-66876504 | Msa0515590:CDS | 45.0% |
| GCTTTGTATCAGTGTAAGGC+GGG | - | chr3_4:66876513-66876532 | None:intergenic | 45.0% | |
| AACAACACCAGTAACATCGC+CGG | - | chr3_4:66876560-66876579 | None:intergenic | 45.0% | |
| !!! | GGTGTTGTTCGTGCTCTTTT+TGG | + | chr3_4:66876571-66876590 | Msa0515590:CDS | 45.0% |
| !!! | AATTATAATTCATTTTTTTT+TGG | + | chr3_4:66872806-66872825 | Msa0515590:intron | 5.0% |
| !!! | AATTATAATTCATTTTTTTT+TGG | + | chr3_4:66872806-66872825 | Msa0515590:intron | 5.0% |
| GAAACTAGCTGAGAGCAGAG+TGG | - | chr3_4:66872407-66872426 | None:intergenic | 50.0% | |
| ! | AGGAAAGAGGTTGGACTAGG+CGG | - | chr3_4:66873690-66873709 | None:intergenic | 50.0% |
| CTCATGTGAAGTCACGCTGA+AGG | + | chr3_4:66874030-66874049 | Msa0515590:CDS | 50.0% | |
| ACAATGGATGGCCCCAGAAA+AGG | + | chr3_4:66874060-66874079 | Msa0515590:CDS | 50.0% | |
| CTGTCCCTTGATCCAGTTGT+TGG | + | chr3_4:66874661-66874680 | Msa0515590:CDS | 50.0% | |
| GCTGCTATAGCTCCAACAAC+TGG | - | chr3_4:66874676-66874695 | None:intergenic | 50.0% | |
| GTTGTTGGAGCTATAGCAGC+CGG | + | chr3_4:66874676-66874695 | Msa0515590:CDS | 50.0% | |
| GAGGCTGGAGCAATTTCTGA+TGG | - | chr3_4:66874721-66874740 | None:intergenic | 50.0% | |
| TGCTGGCGAACTTATTAGGG+AGG | + | chr3_4:66874749-66874768 | Msa0515590:CDS | 50.0% | |
| ACACCTTACACCAGTCGTTC+TGG | + | chr3_4:66875091-66875110 | Msa0515590:CDS | 50.0% | |
| TGGCTATCCAGGAGAACTGA+AGG | - | chr3_4:66875221-66875240 | None:intergenic | 50.0% | |
| !! | GTTTGGTGCCTCTCATTTCC+AGG | + | chr3_4:66875633-66875652 | Msa0515590:intron | 50.0% |
| GGCATCAACCTGGAAATGAG+AGG | - | chr3_4:66875644-66875663 | None:intergenic | 50.0% | |
| TTGGACGACGAGAAGGTTTC+TGG | + | chr3_4:66875766-66875785 | Msa0515590:CDS | 50.0% | |
| !! | ACCGTGATGATGGGAAGCAA+TGG | - | chr3_4:66875979-66875998 | None:intergenic | 50.0% |
| CTTGGAACAGGTGAACAAGC+TGG | + | chr3_4:66876115-66876134 | Msa0515590:intron | 50.0% | |
| CCACAAGCTGCACAAGGAAA+AGG | - | chr3_4:66876357-66876376 | None:intergenic | 50.0% | |
| ! | CCTTTTCCTTGTGCAGCTTG+TGG | + | chr3_4:66876354-66876373 | Msa0515590:intron | 50.0% |
| ! | ACTTTGCCATTTGGGGGAGT+TGG | + | chr3_4:66876382-66876401 | Msa0515590:CDS | 50.0% |
| !! | GGAGTTGGTGACAGTGGAAT+GGG | + | chr3_4:66876397-66876416 | Msa0515590:CDS | 50.0% |
| AGTGGAATGGGTGCATACCA+TGG | + | chr3_4:66876409-66876428 | Msa0515590:CDS | 50.0% | |
| GTGGAATGGGTGCATACCAT+GGG | + | chr3_4:66876410-66876429 | Msa0515590:CDS | 50.0% | |
| ! | TTGATGAAGGCTCTAGTCGC+CGG | + | chr3_4:66876538-66876557 | Msa0515590:CDS | 50.0% |
| ACAAATGGTACGGCACTAGC+AGG | - | chr3_4:66876637-66876656 | None:intergenic | 50.0% | |
| GAAACTAGCTGAGAGCAGAG+TGG | - | chr3_4:66872407-66872426 | None:intergenic | 50.0% | |
| ! | AGGAAAGAGGTTGGACTAGG+CGG | - | chr3_4:66873690-66873709 | None:intergenic | 50.0% |
| CTCATGTGAAGTCACGCTGA+AGG | + | chr3_4:66874030-66874049 | Msa0515590:CDS | 50.0% | |
| ACAATGGATGGCCCCAGAAA+AGG | + | chr3_4:66874060-66874079 | Msa0515590:CDS | 50.0% | |
| CTGTCCCTTGATCCAGTTGT+TGG | + | chr3_4:66874661-66874680 | Msa0515590:CDS | 50.0% | |
| GCTGCTATAGCTCCAACAAC+TGG | - | chr3_4:66874676-66874695 | None:intergenic | 50.0% | |
| GTTGTTGGAGCTATAGCAGC+CGG | + | chr3_4:66874676-66874695 | Msa0515590:CDS | 50.0% | |
| GAGGCTGGAGCAATTTCTGA+TGG | - | chr3_4:66874721-66874740 | None:intergenic | 50.0% | |
| TGCTGGCGAACTTATTAGGG+AGG | + | chr3_4:66874749-66874768 | Msa0515590:CDS | 50.0% | |
| ACACCTTACACCAGTCGTTC+TGG | + | chr3_4:66875091-66875110 | Msa0515590:CDS | 50.0% | |
| TGGCTATCCAGGAGAACTGA+AGG | - | chr3_4:66875221-66875240 | None:intergenic | 50.0% | |
| !! | GTTTGGTGCCTCTCATTTCC+AGG | + | chr3_4:66875633-66875652 | Msa0515590:intron | 50.0% |
| GGCATCAACCTGGAAATGAG+AGG | - | chr3_4:66875644-66875663 | None:intergenic | 50.0% | |
| TTGGACGACGAGAAGGTTTC+TGG | + | chr3_4:66875766-66875785 | Msa0515590:CDS | 50.0% | |
| !! | ACCGTGATGATGGGAAGCAA+TGG | - | chr3_4:66875979-66875998 | None:intergenic | 50.0% |
| CTTGGAACAGGTGAACAAGC+TGG | + | chr3_4:66876115-66876134 | Msa0515590:intron | 50.0% | |
| CCACAAGCTGCACAAGGAAA+AGG | - | chr3_4:66876357-66876376 | None:intergenic | 50.0% | |
| ! | CCTTTTCCTTGTGCAGCTTG+TGG | + | chr3_4:66876354-66876373 | Msa0515590:intron | 50.0% |
| ! | ACTTTGCCATTTGGGGGAGT+TGG | + | chr3_4:66876382-66876401 | Msa0515590:CDS | 50.0% |
| !! | GGAGTTGGTGACAGTGGAAT+GGG | + | chr3_4:66876397-66876416 | Msa0515590:CDS | 50.0% |
| AGTGGAATGGGTGCATACCA+TGG | + | chr3_4:66876409-66876428 | Msa0515590:CDS | 50.0% | |
| GTGGAATGGGTGCATACCAT+GGG | + | chr3_4:66876410-66876429 | Msa0515590:CDS | 50.0% | |
| ! | TTGATGAAGGCTCTAGTCGC+CGG | + | chr3_4:66876538-66876557 | Msa0515590:CDS | 50.0% |
| ACAAATGGTACGGCACTAGC+AGG | - | chr3_4:66876637-66876656 | None:intergenic | 50.0% | |
| GGTGGTGTTTGACGGAGAAG+CGG | + | chr3_4:66872542-66872561 | Msa0515590:CDS | 55.0% | |
| ! | GTCGTTGGTGAAGGACCTGA+GGG | + | chr3_4:66872569-66872588 | Msa0515590:CDS | 55.0% |
| AGTGGGACGGATAGTGATGG+CGG | + | chr3_4:66875058-66875077 | Msa0515590:CDS | 55.0% | |
| GCTCCAGAACGACTGGTGTA+AGG | - | chr3_4:66875097-66875116 | None:intergenic | 55.0% | |
| !! | ACACCAGTCGTTCTGGAGCT+TGG | + | chr3_4:66875098-66875117 | Msa0515590:CDS | 55.0% |
| !! | CGACGAGAAGGTTTCTGGCA+AGG | + | chr3_4:66875771-66875790 | Msa0515590:CDS | 55.0% |
| CTGTCACCAACTCCCCCAAA+TGG | - | chr3_4:66876391-66876410 | None:intergenic | 55.0% | |
| !! | TTTGGGGGAGTTGGTGACAG+TGG | + | chr3_4:66876391-66876410 | Msa0515590:CDS | 55.0% |
| !! | GGGAGTTGGTGACAGTGGAA+TGG | + | chr3_4:66876396-66876415 | Msa0515590:CDS | 55.0% |
| GGTACGGCACTAGCAGGTAT+CGG | - | chr3_4:66876631-66876650 | None:intergenic | 55.0% | |
| GGTGGTGTTTGACGGAGAAG+CGG | + | chr3_4:66872542-66872561 | Msa0515590:CDS | 55.0% | |
| ! | GTCGTTGGTGAAGGACCTGA+GGG | + | chr3_4:66872569-66872588 | Msa0515590:CDS | 55.0% |
| AGTGGGACGGATAGTGATGG+CGG | + | chr3_4:66875058-66875077 | Msa0515590:CDS | 55.0% | |
| GCTCCAGAACGACTGGTGTA+AGG | - | chr3_4:66875097-66875116 | None:intergenic | 55.0% | |
| !! | ACACCAGTCGTTCTGGAGCT+TGG | + | chr3_4:66875098-66875117 | Msa0515590:CDS | 55.0% |
| !! | CGACGAGAAGGTTTCTGGCA+AGG | + | chr3_4:66875771-66875790 | Msa0515590:CDS | 55.0% |
| CTGTCACCAACTCCCCCAAA+TGG | - | chr3_4:66876391-66876410 | None:intergenic | 55.0% | |
| !! | TTTGGGGGAGTTGGTGACAG+TGG | + | chr3_4:66876391-66876410 | Msa0515590:CDS | 55.0% |
| !! | GGGAGTTGGTGACAGTGGAA+TGG | + | chr3_4:66876396-66876415 | Msa0515590:CDS | 55.0% |
| GGTACGGCACTAGCAGGTAT+CGG | - | chr3_4:66876631-66876650 | None:intergenic | 55.0% | |
| ! | CGTCGTTGGTGAAGGACCTG+AGG | + | chr3_4:66872568-66872587 | Msa0515590:CDS | 60.0% |
| TATAGCAGCCGGAAACGCCG+TGG | + | chr3_4:66874687-66874706 | Msa0515590:CDS | 60.0% | |
| TCCAGCCTCGTCTTCACTGC+TGG | + | chr3_4:66874732-66874751 | Msa0515590:CDS | 60.0% | |
| GTTCGCCAGCAGTGAAGACG+AGG | - | chr3_4:66874740-66874759 | None:intergenic | 60.0% | |
| CCTCCAAGCTCCAGAACGAC+TGG | - | chr3_4:66875104-66875123 | None:intergenic | 60.0% | |
| !! | CCAGTCGTTCTGGAGCTTGG+AGG | + | chr3_4:66875101-66875120 | Msa0515590:CDS | 60.0% |
| CTAGTCGCCGGCGATGTTAC+TGG | + | chr3_4:66876550-66876569 | Msa0515590:CDS | 60.0% | |
| ! | CGTCGTTGGTGAAGGACCTG+AGG | + | chr3_4:66872568-66872587 | Msa0515590:CDS | 60.0% |
| TATAGCAGCCGGAAACGCCG+TGG | + | chr3_4:66874687-66874706 | Msa0515590:CDS | 60.0% | |
| TCCAGCCTCGTCTTCACTGC+TGG | + | chr3_4:66874732-66874751 | Msa0515590:CDS | 60.0% | |
| GTTCGCCAGCAGTGAAGACG+AGG | - | chr3_4:66874740-66874759 | None:intergenic | 60.0% | |
| CCTCCAAGCTCCAGAACGAC+TGG | - | chr3_4:66875104-66875123 | None:intergenic | 60.0% | |
| !! | CCAGTCGTTCTGGAGCTTGG+AGG | + | chr3_4:66875101-66875120 | Msa0515590:CDS | 60.0% |
| CTAGTCGCCGGCGATGTTAC+TGG | + | chr3_4:66876550-66876569 | Msa0515590:CDS | 60.0% | |
| ! | AGCGGCGTCGTCGTTGGTGA+AGG | + | chr3_4:66872560-66872579 | Msa0515590:CDS | 65.0% |
| GCCAGCAGTGAAGACGAGGC+TGG | - | chr3_4:66874736-66874755 | None:intergenic | 65.0% | |
| ! | AGCGGCGTCGTCGTTGGTGA+AGG | + | chr3_4:66872560-66872579 | Msa0515590:CDS | 65.0% |
| GCCAGCAGTGAAGACGAGGC+TGG | - | chr3_4:66874736-66874755 | None:intergenic | 65.0% | |
| CGGAGAAGCGGCGTCGTCGT+TGG | + | chr3_4:66872554-66872573 | Msa0515590:CDS | 70.0% | |
| CGGAGAAGCGGCGTCGTCGT+TGG | + | chr3_4:66872554-66872573 | Msa0515590:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 66872320 | 66876787 | 66872320 | ID=Msa0515590;Name=Msa0515590 |
| chr3_4 | mRNA | 66872320 | 66876787 | 66872320 | ID=Msa0515590-mRNA-1;Parent=Msa0515590;Name=Msa0515590-mRNA-1;_AED=0.07;_eAED=0.07;_QI=152|1|1|1|0.9|0.81|11|184|490 |
| chr3_4 | exon | 66872320 | 66872381 | 66872320 | ID=Msa0515590-mRNA-1:exon:17289;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66872423 | 66872743 | 66872423 | ID=Msa0515590-mRNA-1:exon:17290;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66874013 | 66874081 | 66874013 | ID=Msa0515590-mRNA-1:exon:17291;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66874194 | 66874290 | 66874194 | ID=Msa0515590-mRNA-1:exon:17292;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66874659 | 66874865 | 66874659 | ID=Msa0515590-mRNA-1:exon:17293;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66875048 | 66875163 | 66875048 | ID=Msa0515590-mRNA-1:exon:17294;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66875471 | 66875575 | 66875471 | ID=Msa0515590-mRNA-1:exon:17295;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66875655 | 66875827 | 66875655 | ID=Msa0515590-mRNA-1:exon:17296;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66875906 | 66875996 | 66875906 | ID=Msa0515590-mRNA-1:exon:17297;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66876125 | 66876274 | 66876125 | ID=Msa0515590-mRNA-1:exon:17298;Parent=Msa0515590-mRNA-1 |
| chr3_4 | exon | 66876370 | 66876787 | 66876370 | ID=Msa0515590-mRNA-1:exon:17299;Parent=Msa0515590-mRNA-1 |
| chr3_4 | five_prime_UTR | 66872320 | 66872381 | 66872320 | ID=Msa0515590-mRNA-1:five_prime_utr;Parent=Msa0515590-mRNA-1 |
| chr3_4 | five_prime_UTR | 66872423 | 66872512 | 66872423 | ID=Msa0515590-mRNA-1:five_prime_utr;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66872513 | 66872743 | 66872513 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66874013 | 66874081 | 66874013 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66874194 | 66874290 | 66874194 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66874659 | 66874865 | 66874659 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66875048 | 66875163 | 66875048 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66875471 | 66875575 | 66875471 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66875655 | 66875827 | 66875655 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66875906 | 66875996 | 66875906 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66876125 | 66876274 | 66876125 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | CDS | 66876370 | 66876603 | 66876370 | ID=Msa0515590-mRNA-1:cds;Parent=Msa0515590-mRNA-1 |
| chr3_4 | three_prime_UTR | 66876604 | 66876787 | 66876604 | ID=Msa0515590-mRNA-1:three_prime_utr;Parent=Msa0515590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
