Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255830 | XP_003629580.1 | 95.200 | 375 | 3 | 1 | 1 | 375 | 1 | 360 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255830 | sp|Q9C566|CYP40_ARATH | 68.267 | 375 | 103 | 2 | 1 | 374 | 1 | 360 | 0.0 | 535 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255830 | G7LGD2 | 95.200 | 375 | 3 | 1 | 1 | 375 | 1 | 360 | 0.0 | 728 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021320 | Msa1255830 | 0.805068 | 1.595695e-49 | -8.615850e-47 |
| Msa0040220 | Msa1255830 | 0.861795 | 7.979284e-64 | -8.615850e-47 |
| Msa0080370 | Msa1255830 | 0.818885 | 1.551782e-52 | -8.615850e-47 |
| Msa0086160 | Msa1255830 | 0.836075 | 1.157011e-56 | -8.615850e-47 |
| Msa0087910 | Msa1255830 | 0.868347 | 6.983856e-66 | -8.615850e-47 |
| Msa0100600 | Msa1255830 | 0.801718 | 7.890364e-49 | -8.615850e-47 |
| Msa0114600 | Msa1255830 | 0.835507 | 1.611638e-56 | -8.615850e-47 |
| Msa0602900 | Msa1255830 | 0.844036 | 9.695255e-59 | -8.615850e-47 |
| Msa0619230 | Msa1255830 | 0.807174 | 5.750036e-50 | -8.615850e-47 |
| Msa0643960 | Msa1255830 | 0.846213 | 2.500674e-59 | -8.615850e-47 |
| Msa0663400 | Msa1255830 | 0.813852 | 2.075204e-51 | -8.615850e-47 |
| Msa0694400 | Msa1255830 | 0.838086 | 3.544371e-57 | -8.615850e-47 |
| Msa0708630 | Msa1255830 | 0.856380 | 3.344685e-62 | -8.615850e-47 |
| Msa0715970 | Msa1255830 | 0.811489 | 6.824385e-51 | -8.615850e-47 |
| Msa0718560 | Msa1255830 | 0.843109 | 1.715307e-58 | -8.615850e-47 |
| Msa0790450 | Msa1255830 | 0.863648 | 2.142567e-64 | -8.615850e-47 |
| Msa0128330 | Msa1255830 | 0.810684 | 1.019770e-50 | -8.615850e-47 |
| Msa0131810 | Msa1255830 | 0.809839 | 1.551602e-50 | -8.615850e-47 |
| Msa0132460 | Msa1255830 | 0.854929 | 8.867925e-62 | -8.615850e-47 |
| Msa0134580 | Msa1255830 | 0.867263 | 1.556850e-65 | -8.615850e-47 |
| Msa0173250 | Msa1255830 | 0.807744 | 4.351409e-50 | -8.615850e-47 |
| Msa0174580 | Msa1255830 | 0.811196 | 7.902535e-51 | -8.615850e-47 |
| Msa0182050 | Msa1255830 | 0.854854 | 9.327195e-62 | -8.615850e-47 |
| Msa0182100 | Msa1255830 | 0.833939 | 3.997226e-56 | -8.615850e-47 |
| Msa0188740 | Msa1255830 | 0.839254 | 1.768254e-57 | -8.615850e-47 |
| Msa0192300 | Msa1255830 | 0.816983 | 4.173338e-52 | -8.615850e-47 |
| Msa0194940 | Msa1255830 | 0.802512 | 5.415758e-49 | -8.615850e-47 |
| Msa1237040 | Msa1255830 | 0.823690 | 1.209330e-53 | -8.615850e-47 |
| Msa1255830 | Msa1255850 | 0.977320 | 1.517788e-143 | -8.615850e-47 |
| Msa1255830 | Msa1258460 | 0.827985 | 1.155769e-54 | -8.615850e-47 |
| Msa1255830 | Msa1284060 | 0.824126 | 9.555897e-54 | -8.615850e-47 |
| Msa1255830 | Msa1296090 | 0.920909 | 7.035596e-88 | -8.615850e-47 |
| Msa1255830 | Msa1330730 | 0.807645 | 4.568437e-50 | -8.615850e-47 |
| Msa1255830 | Msa1341780 | 0.875260 | 3.545572e-68 | -8.615850e-47 |
| Msa1255830 | Msa1351020 | 0.815003 | 1.154772e-51 | -8.615850e-47 |
| Msa1255830 | Msa1367540 | 0.824794 | 6.655714e-54 | -8.615850e-47 |
| Msa1255830 | Msa1368170 | 0.814746 | 1.316642e-51 | -8.615850e-47 |
| Msa1255830 | Msa1385480 | 0.853569 | 2.191053e-61 | -8.615850e-47 |
| Msa1255830 | Msa1390760 | 0.807005 | 6.243062e-50 | -8.615850e-47 |
| Msa1255830 | Msa1403520 | 0.829211 | 5.844509e-55 | -8.615850e-47 |
| Msa1255830 | Msa1424570 | 0.857286 | 1.810045e-62 | -8.615850e-47 |
| Msa1255830 | Msa1432310 | 0.807446 | 5.035079e-50 | -8.615850e-47 |
| Msa1255830 | Msa1450560 | 0.866160 | 3.494014e-65 | -8.615850e-47 |
| Msa1255830 | Msa1463570 | 0.806511 | 7.937989e-50 | -8.615850e-47 |
| Msa0388250 | Msa1255830 | 0.836924 | 7.034126e-57 | -8.615850e-47 |
| Msa0416210 | Msa1255830 | 0.815049 | 1.128046e-51 | -8.615850e-47 |
| Msa0426250 | Msa1255830 | 0.845451 | 4.027315e-59 | -8.615850e-47 |
| Msa0433060 | Msa1255830 | 0.814662 | 1.374546e-51 | -8.615850e-47 |
| Msa0450150 | Msa1255830 | 0.835061 | 2.088611e-56 | -8.615850e-47 |
| Msa0475810 | Msa1255830 | 0.828023 | 1.131816e-54 | -8.615850e-47 |
| Msa0482560 | Msa1255830 | 0.800161 | 1.641221e-48 | -8.615850e-47 |
| Msa1000780 | Msa1255830 | 0.808980 | 2.371963e-50 | -8.615850e-47 |
| Msa1004780 | Msa1255830 | 0.848855 | 4.698071e-60 | -8.615850e-47 |
| Msa1025200 | Msa1255830 | 0.869538 | 2.872465e-66 | -8.615850e-47 |
| Msa1025220 | Msa1255830 | 0.855639 | 5.510760e-62 | -8.615850e-47 |
| Msa1047020 | Msa1255830 | 0.832124 | 1.130427e-55 | -8.615850e-47 |
| Msa1050100 | Msa1255830 | 0.846130 | 2.634698e-59 | -8.615850e-47 |
| Msa1078080 | Msa1255830 | 0.805354 | 1.389795e-49 | -8.615850e-47 |
| Msa1085850 | Msa1255830 | 0.824449 | 8.025710e-54 | -8.615850e-47 |
| Msa0270160 | Msa1255830 | 0.864381 | 1.266727e-64 | -8.615850e-47 |
| Msa0277600 | Msa1255830 | 0.847503 | 1.109667e-59 | -8.615850e-47 |
| Msa0301250 | Msa1255830 | 0.813268 | 2.790084e-51 | -8.615850e-47 |
| Msa0313060 | Msa1255830 | 0.840636 | 7.716458e-58 | -8.615850e-47 |
| Msa0315430 | Msa1255830 | 0.839744 | 1.318967e-57 | -8.615850e-47 |
| Msa1109310 | Msa1255830 | 0.830207 | 3.343495e-55 | -8.615850e-47 |
| Msa1126690 | Msa1255830 | 0.870678 | 1.217450e-66 | -8.615850e-47 |
| Msa1156900 | Msa1255830 | 0.800588 | 1.343434e-48 | -8.615850e-47 |
| Msa1163660 | Msa1255830 | 0.806620 | 7.530977e-50 | -8.615850e-47 |
| Msa1203560 | Msa1255830 | 0.864121 | 1.527224e-64 | -8.615850e-47 |
| Msa1208330 | Msa1255830 | 0.815370 | 9.573584e-52 | -8.615850e-47 |
| Msa0515110 | Msa1255830 | 0.805955 | 1.039845e-49 | -8.615850e-47 |
| Msa0524680 | Msa1255830 | 0.811175 | 7.982461e-51 | -8.615850e-47 |
| Msa0547920 | Msa1255830 | 0.849029 | 4.203852e-60 | -8.615850e-47 |
| Msa0563540 | Msa1255830 | 0.805727 | 1.160997e-49 | -8.615850e-47 |
| Msa0573550 | Msa1255830 | 0.848828 | 4.778152e-60 | -8.615850e-47 |
| Msa0585570 | Msa1255830 | 0.806351 | 8.579091e-50 | -8.615850e-47 |
| Msa0589160 | Msa1255830 | 0.804025 | 2.632919e-49 | -8.615850e-47 |
| Msa0846900 | Msa1255830 | 0.804325 | 2.280760e-49 | -8.615850e-47 |
| Msa0926310 | Msa1255830 | 0.806389 | 8.423183e-50 | -8.615850e-47 |
| Msa0929700 | Msa1255830 | 0.822102 | 2.834713e-53 | -8.615850e-47 |
| Msa0930100 | Msa1255830 | 0.863610 | 2.201223e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255830 | MtrunA17_Chr8g0374621 | 95.200 | 375 | 3 | 1 | 1 | 375 | 1 | 360 | 0.0 | 728 |
| Msa1255830 | MtrunA17_Chr4g0045321 | 71.011 | 376 | 93 | 2 | 1 | 375 | 1 | 361 | 0.0 | 555 |
| Msa1255830 | MtrunA17_Chr7g0274841 | 63.429 | 175 | 60 | 3 | 1 | 174 | 1 | 172 | 1.25e-70 | 218 |
| Msa1255830 | MtrunA17_Chr4g0038431 | 61.143 | 175 | 64 | 3 | 1 | 174 | 1 | 172 | 3.11e-69 | 215 |
| Msa1255830 | MtrunA17_Chr7g0260441 | 60.773 | 181 | 68 | 2 | 3 | 182 | 6 | 184 | 3.16e-69 | 229 |
| Msa1255830 | MtrunA17_Chr3g0104751 | 60.355 | 169 | 65 | 2 | 5 | 173 | 35 | 201 | 7.87e-64 | 202 |
| Msa1255830 | MtrunA17_Chr3g0113441 | 58.480 | 171 | 69 | 2 | 5 | 175 | 65 | 233 | 2.63e-63 | 202 |
| Msa1255830 | MtrunA17_Chr3g0145501 | 58.140 | 172 | 68 | 3 | 5 | 175 | 13 | 181 | 3.14e-63 | 200 |
| Msa1255830 | MtrunA17_Chr1g0213971 | 57.558 | 172 | 62 | 2 | 5 | 173 | 78 | 241 | 6.76e-61 | 196 |
| Msa1255830 | MtrunA17_Chr7g0270991 | 55.030 | 169 | 68 | 1 | 5 | 173 | 97 | 257 | 1.73e-59 | 193 |
| Msa1255830 | MtrunA17_Chr1g0193711 | 57.647 | 170 | 63 | 2 | 5 | 173 | 86 | 247 | 3.16e-59 | 192 |
| Msa1255830 | MtrunA17_Chr8g0353571 | 55.233 | 172 | 73 | 2 | 3 | 173 | 17 | 185 | 5.33e-58 | 186 |
| Msa1255830 | MtrunA17_Chr4g0037281 | 56.471 | 170 | 72 | 2 | 5 | 173 | 47 | 215 | 7.35e-57 | 185 |
| Msa1255830 | MtrunA17_Chr3g0138061 | 47.500 | 200 | 100 | 3 | 3 | 201 | 9 | 204 | 7.75e-46 | 168 |
| Msa1255830 | MtrunA17_Chr1g0149061 | 49.708 | 171 | 82 | 3 | 6 | 175 | 9 | 176 | 4.44e-43 | 159 |
| Msa1255830 | MtrunA17_Chr8g0351571 | 49.664 | 149 | 62 | 3 | 18 | 165 | 10 | 146 | 1.10e-39 | 138 |
| Msa1255830 | MtrunA17_Chr2g0321111 | 50.649 | 154 | 63 | 4 | 18 | 170 | 471 | 612 | 2.91e-37 | 142 |
| Msa1255830 | MtrunA17_Chr7g0266721 | 44.848 | 165 | 73 | 5 | 4 | 167 | 10 | 157 | 5.18e-35 | 126 |
| Msa1255830 | MtrunA17_Chr5g0401141 | 40.609 | 197 | 82 | 6 | 18 | 213 | 354 | 516 | 1.36e-32 | 128 |
| Msa1255830 | MtrunA17_Chr2g0288371 | 43.243 | 148 | 67 | 6 | 18 | 161 | 22 | 156 | 1.31e-21 | 96.3 |
| Msa1255830 | MtrunA17_Chr6g0484281 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 1.54e-17 | 84.3 |
| Msa1255830 | MtrunA17_Chr8g0357591 | 33.962 | 159 | 84 | 5 | 18 | 167 | 10 | 156 | 1.90e-16 | 80.9 |
| Msa1255830 | MtrunA17_Chr3g0122871 | 62.500 | 48 | 18 | 0 | 104 | 151 | 62 | 109 | 1.04e-14 | 70.1 |
| Msa1255830 | MtrunA17_Chr8g0377771 | 32.000 | 175 | 94 | 5 | 207 | 374 | 387 | 543 | 7.66e-14 | 72.8 |
| Msa1255830 | MtrunA17_Chr1g0199071 | 33.758 | 157 | 81 | 7 | 17 | 170 | 88 | 224 | 1.40e-13 | 69.7 |
| Msa1255830 | MtrunA17_Chr8g0339141 | 30.000 | 180 | 101 | 5 | 203 | 375 | 387 | 548 | 1.57e-13 | 72.0 |
| Msa1255830 | MtrunA17_Chr1g0163031 | 31.818 | 154 | 89 | 4 | 17 | 170 | 87 | 224 | 2.51e-12 | 65.9 |
| Msa1255830 | MtrunA17_Chr7g0234801 | 30.159 | 189 | 106 | 6 | 194 | 374 | 369 | 539 | 3.62e-12 | 67.8 |
| Msa1255830 | MtrunA17_Chr2g0305071 | 24.623 | 199 | 101 | 7 | 16 | 171 | 90 | 282 | 3.61e-11 | 63.5 |
| Msa1255830 | MtrunA17_Chr7g0255551 | 31.325 | 166 | 95 | 4 | 209 | 373 | 374 | 521 | 5.76e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255830 | AT2G15790.1 | 68.267 | 375 | 103 | 2 | 1 | 374 | 1 | 360 | 0.0 | 535 |
| Msa1255830 | AT3G63400.2 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 9.76e-75 | 237 |
| Msa1255830 | AT3G63400.3 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 1.03e-72 | 237 |
| Msa1255830 | AT3G63400.4 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 1.03e-72 | 237 |
| Msa1255830 | AT3G63400.1 | 66.667 | 174 | 55 | 2 | 3 | 175 | 6 | 177 | 1.03e-72 | 237 |
| Msa1255830 | AT4G34870.1 | 62.857 | 175 | 61 | 3 | 1 | 174 | 1 | 172 | 1.22e-70 | 219 |
| Msa1255830 | AT2G16600.1 | 63.006 | 173 | 60 | 3 | 3 | 174 | 4 | 173 | 1.86e-70 | 218 |
| Msa1255830 | AT4G38740.1 | 61.714 | 175 | 63 | 3 | 1 | 174 | 1 | 172 | 6.39e-70 | 217 |
| Msa1255830 | AT2G21130.1 | 61.494 | 174 | 63 | 3 | 3 | 175 | 4 | 174 | 1.49e-69 | 216 |
| Msa1255830 | AT3G56070.1 | 63.218 | 174 | 60 | 3 | 1 | 173 | 1 | 171 | 2.10e-69 | 216 |
| Msa1255830 | AT3G56070.2 | 63.218 | 174 | 60 | 3 | 1 | 173 | 1 | 171 | 2.10e-69 | 216 |
| Msa1255830 | AT2G29960.1 | 59.763 | 169 | 66 | 2 | 5 | 173 | 33 | 199 | 1.62e-63 | 202 |
| Msa1255830 | AT2G29960.3 | 59.763 | 169 | 66 | 2 | 5 | 173 | 33 | 199 | 1.62e-63 | 202 |
| Msa1255830 | AT5G13120.2 | 57.386 | 176 | 64 | 2 | 5 | 177 | 87 | 254 | 1.64e-63 | 204 |
| Msa1255830 | AT5G13120.1 | 57.386 | 176 | 64 | 2 | 5 | 177 | 91 | 258 | 1.74e-63 | 204 |
| Msa1255830 | AT3G55920.1 | 60.000 | 170 | 66 | 2 | 5 | 174 | 60 | 227 | 2.67e-63 | 202 |
| Msa1255830 | AT3G62030.1 | 58.580 | 169 | 62 | 1 | 5 | 173 | 96 | 256 | 2.81e-62 | 201 |
| Msa1255830 | AT3G62030.3 | 58.580 | 169 | 62 | 1 | 5 | 173 | 95 | 255 | 2.82e-62 | 201 |
| Msa1255830 | AT3G62030.2 | 58.580 | 169 | 62 | 1 | 5 | 173 | 149 | 309 | 6.96e-62 | 201 |
| Msa1255830 | AT5G58710.1 | 58.580 | 169 | 68 | 2 | 5 | 173 | 36 | 202 | 3.06e-60 | 193 |
| Msa1255830 | AT2G38730.1 | 56.395 | 172 | 71 | 2 | 3 | 173 | 31 | 199 | 4.07e-59 | 190 |
| Msa1255830 | AT2G29960.2 | 57.396 | 169 | 60 | 3 | 5 | 173 | 33 | 189 | 7.57e-58 | 187 |
| Msa1255830 | AT4G34960.1 | 53.846 | 169 | 77 | 1 | 5 | 173 | 48 | 215 | 7.36e-57 | 185 |
| Msa1255830 | AT2G16600.2 | 55.491 | 173 | 51 | 3 | 3 | 174 | 4 | 151 | 7.38e-57 | 183 |
| Msa1255830 | AT4G34960.2 | 57.377 | 122 | 51 | 1 | 5 | 126 | 48 | 168 | 1.77e-43 | 149 |
| Msa1255830 | AT4G32420.1 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 1.02e-42 | 159 |
| Msa1255830 | AT4G32420.5 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 1.02e-42 | 159 |
| Msa1255830 | AT4G32420.3 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 1.02e-42 | 159 |
| Msa1255830 | AT4G32420.6 | 47.953 | 171 | 86 | 2 | 3 | 172 | 6 | 174 | 1.02e-42 | 159 |
| Msa1255830 | AT3G22920.1 | 46.703 | 182 | 85 | 6 | 1 | 179 | 1 | 173 | 6.41e-41 | 144 |
| Msa1255830 | AT4G32420.4 | 48.993 | 149 | 76 | 0 | 3 | 151 | 6 | 154 | 1.41e-40 | 153 |
| Msa1255830 | AT1G01940.1 | 48.993 | 149 | 63 | 3 | 18 | 165 | 10 | 146 | 2.44e-38 | 135 |
| Msa1255830 | AT3G44600.1 | 50.649 | 154 | 63 | 3 | 18 | 170 | 485 | 626 | 2.45e-38 | 145 |
| Msa1255830 | AT2G36130.1 | 43.636 | 165 | 75 | 5 | 4 | 167 | 10 | 157 | 1.42e-34 | 125 |
| Msa1255830 | AT5G67530.1 | 44.156 | 154 | 73 | 4 | 18 | 170 | 353 | 494 | 1.95e-32 | 128 |
| Msa1255830 | AT4G33060.1 | 43.243 | 148 | 67 | 6 | 18 | 161 | 22 | 156 | 3.01e-25 | 107 |
| Msa1255830 | AT1G53720.2 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 6.57e-19 | 87.4 |
| Msa1255830 | AT1G53720.1 | 34.591 | 159 | 83 | 5 | 18 | 167 | 10 | 156 | 2.03e-18 | 87.0 |
| Msa1255830 | AT3G25230.1 | 32.804 | 189 | 101 | 6 | 194 | 374 | 375 | 545 | 9.25e-15 | 76.3 |
| Msa1255830 | AT3G25230.2 | 33.333 | 189 | 100 | 6 | 194 | 374 | 375 | 545 | 1.15e-14 | 75.9 |
| Msa1255830 | AT5G48570.1 | 29.545 | 176 | 99 | 4 | 207 | 375 | 399 | 556 | 3.30e-12 | 68.2 |
Find 124 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGCAAGGCTTTGCGCTATT+TGG | 0.169942 | 8_2:+55090841 | Msa1255830:CDS |
| CAGAGAAGAGCACTGCTTTA+AGG | 0.171724 | 8_2:+55091016 | Msa1255830:intron |
| CAGGCCTGTAAATTAAAATT+AGG | 0.205661 | 8_2:+55091767 | Msa1255830:intron |
| TCTCTCTGCACCGGCGAAAA+AGG | 0.252295 | 8_2:+55089958 | Msa1255830:CDS |
| GATGGGAAGCATGTGGTGTT+TGG | 0.308347 | 8_2:+55090237 | Msa1255830:CDS |
| AATTAGCCTTGATGCGGATA+TGG | 0.331853 | 8_2:+55093411 | Msa1255830:exon |
| TGTATTACTGACCTTCTTCC+TGG | 0.341120 | 8_2:-55093256 | None:intergenic |
| AACTGACTCCCATTGGTGTT+TGG | 0.342691 | 8_2:-55090183 | None:intergenic |
| CTGTTGAGCTTGGTCCGGTT+GGG | 0.343040 | 8_2:+55090292 | Msa1255830:CDS |
| ATGGGAAGCATGTGGTGTTT+GGG | 0.357969 | 8_2:+55090238 | Msa1255830:CDS |
| GCTCAAAGAGTTTGTCAAAA+TGG | 0.375853 | 8_2:-55093598 | None:intergenic |
| CTTTGGAAATGAACACTATA+AGG | 0.386961 | 8_2:+55090497 | Msa1255830:CDS |
| GACGACGAGGACGCCGCATT+TGG | 0.389302 | 8_2:+55090215 | Msa1255830:CDS |
| CAGTGGAGCTTTACTTGATT+CGG | 0.393358 | 8_2:+55091796 | Msa1255830:CDS |
| AATAGTCACCAACCATCATT+TGG | 0.395698 | 8_2:-55092603 | None:intergenic |
| TTGCTGAAGGGGAGGATGAA+GGG | 0.404415 | 8_2:+55090364 | Msa1255830:CDS |
| TGAAAGGGATTGGAGTTGTT+AGG | 0.404472 | 8_2:+55090268 | Msa1255830:CDS |
| GGGAAGGTTGTGAAAGGGAT+TGG | 0.404533 | 8_2:+55090258 | Msa1255830:CDS |
| GTTGAATCTATCAAGGGCTT+TGG | 0.411683 | 8_2:+55090480 | Msa1255830:CDS |
| ACCTAAAACACGAACGGAAA+GGG | 0.412914 | 8_2:+55090136 | Msa1255830:CDS |
| CAATGACCTGGATGCCGCTC+TGG | 0.426988 | 8_2:+55092551 | Msa1255830:CDS |
| GGAAGATGGATTTCTTGAAA+TGG | 0.436360 | 8_2:-55090008 | None:intergenic |
| TGCGCTATTTGGACATGTGT+TGG | 0.444418 | 8_2:+55090852 | Msa1255830:CDS |
| ATCCACCATTCAAGCTCATC+CGG | 0.445405 | 8_2:-55090450 | None:intergenic |
| ATCTCCGCCTCCGACGGAAC+CGG | 0.449439 | 8_2:+55090069 | Msa1255830:CDS |
| ATTGCTGAAGGGGAGGATGA+AGG | 0.452826 | 8_2:+55090363 | Msa1255830:CDS |
| GCGCTATTTGGACATGTGTT+GGG | 0.453371 | 8_2:+55090853 | Msa1255830:CDS |
| TCTGTTGAGCTTGGTCCGGT+TGG | 0.454918 | 8_2:+55090291 | Msa1255830:CDS |
| CAATTTGTACCAAGATGGAT+AGG | 0.457074 | 8_2:-55092140 | None:intergenic |
| ATGTTGTGATTGCTGATTGT+GGG | 0.460587 | 8_2:+55090337 | Msa1255830:CDS |
| GGCTTGGTATCAAGATCAAC+AGG | 0.464431 | 8_2:-55090429 | None:intergenic |
| AGGAAAGGGTAAGGAAAAGA+AGG | 0.464932 | 8_2:+55092110 | Msa1255830:CDS |
| TTTGTCAATTTGTACCAAGA+TGG | 0.465295 | 8_2:-55092145 | None:intergenic |
| ACGAGGACGCCGCATTTGGA+TGG | 0.473500 | 8_2:+55090219 | Msa1255830:CDS |
| AGCTCTGTTTCGCAAAGGCC+AGG | 0.474119 | 8_2:+55091850 | Msa1255830:CDS |
| CCAAGCCGGATGAGCTTGAA+TGG | 0.476855 | 8_2:+55090445 | Msa1255830:CDS |
| TGTTGAGCTTGGTCCGGTTG+GGG | 0.477465 | 8_2:+55090293 | Msa1255830:CDS |
| GTTGTTAGGTCTGTTGAGCT+TGG | 0.477926 | 8_2:+55090282 | Msa1255830:CDS |
| GAATGCTGTTGAATCTATCA+AGG | 0.478392 | 8_2:+55090473 | Msa1255830:CDS |
| TCGAAGTACACTCTTGGGTT+CGG | 0.485037 | 8_2:-55089850 | None:intergenic |
| CTTATGTCGAAGTACACTCT+TGG | 0.486685 | 8_2:-55089856 | None:intergenic |
| TCAAATCTTTACCAACAGTT+CGG | 0.490310 | 8_2:+55091050 | Msa1255830:CDS |
| GGTTGCTGATAGACATGATA+AGG | 0.494242 | 8_2:+55093362 | Msa1255830:intron |
| GAAAACTTGTCAGTTGTGAC+TGG | 0.495156 | 8_2:-55093717 | None:intergenic |
| TTTGACGACACGGTGGAAGA+TGG | 0.495856 | 8_2:-55090022 | None:intergenic |
| AGCTATCCAGAGCGGCATCC+AGG | 0.495882 | 8_2:-55092557 | None:intergenic |
| TGCTGAAGGGGAGGATGAAG+GGG | 0.498218 | 8_2:+55090365 | Msa1255830:CDS |
| GGTCGATCATTCTCCCCAAC+CGG | 0.499007 | 8_2:-55090306 | None:intergenic |
| TGACTCGCCGCCGGTTCCGT+CGG | 0.502311 | 8_2:-55090079 | None:intergenic |
| GGAGAATGATCGACCGGAGC+AGG | 0.502619 | 8_2:+55090314 | Msa1255830:CDS |
| TTATGTCGAAGTACACTCTT+GGG | 0.506372 | 8_2:-55089855 | None:intergenic |
| TTTCGCCGGTGCAGAGAGAT+CGG | 0.511855 | 8_2:-55089954 | None:intergenic |
| GCCGCCGGTTCCGTCGGAGG+CGG | 0.516656 | 8_2:-55090073 | None:intergenic |
| ATTGTTTAATAGGGAGGAAA+GGG | 0.516703 | 8_2:+55092096 | Msa1255830:intron |
| AGGCGGAGATGTCACCGCCT+TGG | 0.518147 | 8_2:-55090056 | None:intergenic |
| ATCTTCCACCGTGTCGTCAA+AGG | 0.519364 | 8_2:+55090024 | Msa1255830:CDS |
| AATTGTTTAATAGGGAGGAA+AGG | 0.520493 | 8_2:+55092095 | Msa1255830:intron |
| AATGAAGATGAAGAGTGAAG+TGG | 0.522437 | 8_2:-55089792 | None:intergenic |
| ATACCGGTCCAAACACCAAT+GGG | 0.522499 | 8_2:+55090175 | Msa1255830:CDS |
| TTAGAGTTGGAGCCAAATGA+TGG | 0.524064 | 8_2:+55092591 | Msa1255830:CDS |
| CTTCAAGAGAGCATTAGAGT+TGG | 0.526509 | 8_2:+55092578 | Msa1255830:CDS |
| AAGCATCGGCGGTGAACTCG+AGG | 0.527582 | 8_2:+55089876 | Msa1255830:CDS |
| GTGTTTGGGAAGGTTGTGAA+AGG | 0.528665 | 8_2:+55090252 | Msa1255830:CDS |
| TAGGTCTGTTGAGCTTGGTC+CGG | 0.531881 | 8_2:+55090287 | Msa1255830:CDS |
| ACTCCCATTGGTGTTTGGAC+CGG | 0.534347 | 8_2:-55090178 | None:intergenic |
| GGGTAAAACCCTATCCATCT+TGG | 0.536927 | 8_2:+55092131 | Msa1255830:CDS |
| CCATTCAAGCTCATCCGGCT+TGG | 0.539396 | 8_2:-55090445 | None:intergenic |
| TTGTGGGGAGATTGCTGAAG+GGG | 0.543269 | 8_2:+55090353 | Msa1255830:CDS |
| GATGTTGTGATTGCTGATTG+TGG | 0.548690 | 8_2:+55090336 | Msa1255830:CDS |
| CTCGCCGCCGGTTCCGTCGG+AGG | 0.551251 | 8_2:-55090076 | None:intergenic |
| GCAATCACAACATCCTGCTC+CGG | 0.552793 | 8_2:-55090327 | None:intergenic |
| ACAGAAGCAAGATTATAAGA+TGG | 0.553869 | 8_2:+55090805 | Msa1255830:intron |
| ACCGTAGATTGACTCGCCGC+CGG | 0.554056 | 8_2:-55090088 | None:intergenic |
| TGGGGAGATTGCTGAAGGGG+AGG | 0.554625 | 8_2:+55090356 | Msa1255830:CDS |
| TGTTTGGGAAGGTTGTGAAA+GGG | 0.554643 | 8_2:+55090253 | Msa1255830:CDS |
| TTTGGACATGTGTTGGGAGA+AGG | 0.556697 | 8_2:+55090859 | Msa1255830:CDS |
| CTTGAAATGGAGAGGGACGT+TGG | 0.557692 | 8_2:-55089995 | None:intergenic |
| GACCTAAAACACGAACGGAA+AGG | 0.557928 | 8_2:+55090135 | Msa1255830:CDS |
| GTACGCAATTGCCAGGAAGA+AGG | 0.562491 | 8_2:+55093245 | Msa1255830:CDS |
| CGAGGACGCCGCATTTGGAT+GGG | 0.564333 | 8_2:+55090220 | Msa1255830:CDS |
| GTTTGGACCGGTATTCGCCA+TGG | 0.566119 | 8_2:-55090166 | None:intergenic |
| ACCGGCGGCGAGTCAATCTA+CGG | 0.568908 | 8_2:+55090087 | Msa1255830:CDS |
| GAAGCATGTGGTGTTTGGGA+AGG | 0.570028 | 8_2:+55090242 | Msa1255830:CDS |
| ATGGATTTCTTGAAATGGAG+AGG | 0.571440 | 8_2:-55090003 | None:intergenic |
| GTCAAAGGCTTCATGATCCA+AGG | 0.574138 | 8_2:+55090039 | Msa1255830:CDS |
| CATACACCATATCCGCATCA+AGG | 0.575826 | 8_2:-55093417 | None:intergenic |
| AATTTGTACCAAGATGGATA+GGG | 0.579393 | 8_2:-55092139 | None:intergenic |
| TGTGATACTTACCGAACTGT+TGG | 0.579721 | 8_2:-55091061 | None:intergenic |
| TGGATTTCTTGAAATGGAGA+GGG | 0.579737 | 8_2:-55090002 | None:intergenic |
| TCCGCCTCCGACGGAACCGG+CGG | 0.580073 | 8_2:+55090072 | Msa1255830:CDS |
| GGTGACATCTCCGCCTCCGA+CGG | 0.583678 | 8_2:+55090063 | Msa1255830:CDS |
| GATTGTGGGGAGATTGCTGA+AGG | 0.584654 | 8_2:+55090351 | Msa1255830:CDS |
| TTAATAGGGAGGAAAGGGTA+AGG | 0.595124 | 8_2:+55092101 | Msa1255830:intron |
| GGTTGGGGAGAATGATCGAC+CGG | 0.607475 | 8_2:+55090308 | Msa1255830:CDS |
| GGATATGGTGTATGTGGCGA+TGG | 0.608582 | 8_2:+55093426 | Msa1255830:three_prime_UTR |
| GACATGTGTTGGGAGAAGGA+TGG | 0.614412 | 8_2:+55090863 | Msa1255830:CDS |
| AGCATCGGCGGTGAACTCGA+GGG | 0.617751 | 8_2:+55089877 | Msa1255830:CDS |
| TGTTGATCTTGATACCAAGC+CGG | 0.622111 | 8_2:+55090431 | Msa1255830:CDS |
| ATGTTCAATTAGCCTTGATG+CGG | 0.622340 | 8_2:+55093405 | Msa1255830:exon |
| TCATGAAGCCTTTGACGACA+CGG | 0.625678 | 8_2:-55090032 | None:intergenic |
| AATACCGGTCCAAACACCAA+TGG | 0.627525 | 8_2:+55090174 | Msa1255830:CDS |
| GGAAAGGGTAAGGAAAAGAA+GGG | 0.627535 | 8_2:+55092111 | Msa1255830:CDS |
| TGTTGTGATTGCTGATTGTG+GGG | 0.627931 | 8_2:+55090338 | Msa1255830:CDS |
| CTCTGTTATAGAAAATCACT+AGG | 0.629874 | 8_2:-55093625 | None:intergenic |
| TGATGCGGATATGGTGTATG+TGG | 0.632119 | 8_2:+55093420 | Msa1255830:three_prime_UTR |
| AATTTCCGATCTCTCTGCAC+CGG | 0.632806 | 8_2:+55089949 | Msa1255830:CDS |
| ATTTCGACCTAAAACACGAA+CGG | 0.634503 | 8_2:+55090130 | Msa1255830:CDS |
| TCGGACTTTGCAATGCACGA+TGG | 0.636187 | 8_2:+55091815 | Msa1255830:CDS |
| AATGCTGTTGAATCTATCAA+GGG | 0.636468 | 8_2:+55090474 | Msa1255830:CDS |
| ATTGTGGGGAGATTGCTGAA+GGG | 0.637501 | 8_2:+55090352 | Msa1255830:CDS |
| TGGAGAGGGACGTTGGTGTG+TGG | 0.640483 | 8_2:-55089988 | None:intergenic |
| GTATATGTTACTCAATGACC+TGG | 0.641203 | 8_2:+55092539 | Msa1255830:CDS |
| GCAAAAGCTCTGTTTCGCAA+AGG | 0.644842 | 8_2:+55091845 | Msa1255830:CDS |
| GTGTACTTCGACATAAGCAT+CGG | 0.649168 | 8_2:+55089862 | Msa1255830:CDS |
| GAGAAGGATGGTGTTGACCA+AGG | 0.659869 | 8_2:+55090875 | Msa1255830:CDS |
| AGCCGGATGAGCTTGAATGG+TGG | 0.662688 | 8_2:+55090448 | Msa1255830:CDS |
| ACATGCTTCCCATCCAAATG+CGG | 0.664004 | 8_2:-55090228 | None:intergenic |
| TACTTCGACATAAGCATCGG+CGG | 0.673491 | 8_2:+55089865 | Msa1255830:CDS |
| TTAAAATTAGGTGACCTCAG+TGG | 0.703190 | 8_2:+55091779 | Msa1255830:CDS |
| GCATTTGGATGGGAAGCATG+TGG | 0.713375 | 8_2:+55090230 | Msa1255830:CDS |
| TGAAGCCTTTGACGACACGG+TGG | 0.743535 | 8_2:-55090029 | None:intergenic |
| TCTCTTGAAGCTATCCAGAG+CGG | 0.756413 | 8_2:-55092565 | None:intergenic |
| AAAGGCTTCATGATCCAAGG+CGG | 0.764461 | 8_2:+55090042 | Msa1255830:CDS |
| AATCAAGTAAAGCTCCACTG+AGG | 0.768633 | 8_2:-55091793 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATGTTTTAGTTTTATTT+GGG | + | chr8_2:55090704-55090723 | Msa1255830:intron | 10.0% |
| !! | AAATTACTATATATAATACA+TGG | - | chr8_2:55092486-55092505 | None:intergenic | 10.0% |
| !!! | GTTATTAACTTTTTTAAAGA+TGG | + | chr8_2:55090387-55090406 | Msa1255830:CDS | 15.0% |
| !!! | CTTAATGTTTTAGTTTTATT+TGG | + | chr8_2:55090703-55090722 | Msa1255830:intron | 15.0% |
| !!! | TAAATGTGAATTAAATTTTC+AGG | + | chr8_2:55091748-55091767 | Msa1255830:intron | 15.0% |
| !!! | TTGAATTTTGATCTATTTTG+AGG | + | chr8_2:55090565-55090584 | Msa1255830:intron | 20.0% |
| !!! | TCATGTTTTGTAAATTTAGT+TGG | + | chr8_2:55091411-55091430 | Msa1255830:intron | 20.0% |
| !! | AGTATTTGTAAAGAAAACAT+GGG | - | chr8_2:55091513-55091532 | None:intergenic | 20.0% |
| !! | AAGTATTTGTAAAGAAAACA+TGG | - | chr8_2:55091514-55091533 | None:intergenic | 20.0% |
| !! | ACAAATTGACAAAAAGTTTA+AGG | + | chr8_2:55092155-55092174 | Msa1255830:intron | 20.0% |
| !! | CAAATTGACAAAAAGTTTAA+GGG | + | chr8_2:55092156-55092175 | Msa1255830:intron | 20.0% |
| !! | AAATTGACAAAAAGTTTAAG+GGG | + | chr8_2:55092157-55092176 | Msa1255830:intron | 20.0% |
| !! | TAAAGTAGCAAATTACAATT+CGG | - | chr8_2:55092250-55092269 | None:intergenic | 20.0% |
| !!! | GTAATTTGCTATTTGTTTTT+TGG | + | chr8_2:55092499-55092518 | Msa1255830:intron | 20.0% |
| !! | AATTACTTTCTTATAACACT+GGG | + | chr8_2:55092701-55092720 | Msa1255830:intron | 20.0% |
| !! | TTCATATAGAAACATATCTT+TGG | + | chr8_2:55092795-55092814 | Msa1255830:intron | 20.0% |
| !!! | CAAAGTTAATTTGATATTTC+TGG | + | chr8_2:55093172-55093191 | Msa1255830:intron | 20.0% |
| !!! | GTTTTTTCTTAAATGGTATT+AGG | + | chr8_2:55093693-55093712 | Msa1255830:three_prime_UTR | 20.0% |
| !! | AAATTTTCGTCTTCGAAATT+TGG | - | chr8_2:55090114-55090133 | None:intergenic | 25.0% |
| !!! | TATTTTGAGGTTTGTATATG+AGG | + | chr8_2:55090578-55090597 | Msa1255830:intron | 25.0% |
| ! | ACTAAAACATTAAGCTTACA+TGG | - | chr8_2:55090697-55090716 | None:intergenic | 25.0% |
| !!! | AGTTTTATTTGGGAATATAG+TGG | + | chr8_2:55090714-55090733 | Msa1255830:intron | 25.0% |
| !! | AAAATCATGAGAAGAGTTTT+AGG | - | chr8_2:55091218-55091237 | None:intergenic | 25.0% |
| ! | AGCAATCAATTATTGAAAGT+CGG | - | chr8_2:55091264-55091283 | None:intergenic | 25.0% |
| !!! | AAGACTTTAGTTTTGGAAAT+TGG | + | chr8_2:55091328-55091347 | Msa1255830:intron | 25.0% |
| !!! | AGACTTTAGTTTTGGAAATT+GGG | + | chr8_2:55091329-55091348 | Msa1255830:intron | 25.0% |
| ! | TAGTAAAATAGTCATTCACA+AGG | - | chr8_2:55091484-55091503 | None:intergenic | 25.0% |
| ! | TTACAAATACTTACTCTCTT+AGG | + | chr8_2:55091522-55091541 | Msa1255830:intron | 25.0% |
| ! | TACAAATACTTACTCTCTTA+GGG | + | chr8_2:55091523-55091542 | Msa1255830:intron | 25.0% |
| !!! | GTCACCTAATTTTAATTTAC+AGG | - | chr8_2:55091774-55091793 | None:intergenic | 25.0% |
| !!! | AATTTGATGGTTTTGACTTT+TGG | - | chr8_2:55092301-55092320 | None:intergenic | 25.0% |
| ! | AGTCAAAACCATCAAATTTA+TGG | + | chr8_2:55092303-55092322 | Msa1255830:intron | 25.0% |
| ! | GTCAAAACCATCAAATTTAT+GGG | + | chr8_2:55092304-55092323 | Msa1255830:intron | 25.0% |
| ! | CTATATATAATACATGGCTA+TGG | - | chr8_2:55092480-55092499 | None:intergenic | 25.0% |
| ! | CAATTACTTTCTTATAACAC+TGG | + | chr8_2:55092700-55092719 | Msa1255830:intron | 25.0% |
| ! | ATTACTTTCTTATAACACTG+GGG | + | chr8_2:55092702-55092721 | Msa1255830:intron | 25.0% |
| ! | GATTAAACACAACAATGAAA+GGG | - | chr8_2:55092913-55092932 | None:intergenic | 25.0% |
| ! | TGATTAAACACAACAATGAA+AGG | - | chr8_2:55092914-55092933 | None:intergenic | 25.0% |
| ! | ATTTCATGTTGAATTGATTG+TGG | - | chr8_2:55092998-55093017 | None:intergenic | 25.0% |
| ! | TTAACAAGTCAAAGTGTAAA+TGG | + | chr8_2:55093032-55093051 | Msa1255830:intron | 25.0% |
| ! | ATGTTTCATTTCATACACAA+AGG | - | chr8_2:55093086-55093105 | None:intergenic | 25.0% |
| !! | TTTATTCTGTTTACTGCTTT+TGG | + | chr8_2:55093334-55093353 | Msa1255830:intron | 25.0% |
| !!! | TCTACTCGTTTTTTCTTAAA+TGG | + | chr8_2:55093686-55093705 | Msa1255830:three_prime_UTR | 25.0% |
| ! | AATAAAAAACTGACTCCCAT+TGG | - | chr8_2:55090193-55090212 | None:intergenic | 30.0% |
| AATGCTGTTGAATCTATCAA+GGG | + | chr8_2:55090474-55090493 | Msa1255830:CDS | 30.0% | |
| ! | CTTTGGAAATGAACACTATA+AGG | + | chr8_2:55090497-55090516 | Msa1255830:CDS | 30.0% |
| CACTATAAGGTGAATTTCAA+AGG | + | chr8_2:55090510-55090529 | Msa1255830:intron | 30.0% | |
| ATAAGGTGAATTTCAAAGGA+TGG | + | chr8_2:55090514-55090533 | Msa1255830:intron | 30.0% | |
| TAATCAGCAGATCATAAGAA+TGG | - | chr8_2:55090750-55090769 | None:intergenic | 30.0% | |
| ACAGAAGCAAGATTATAAGA+TGG | + | chr8_2:55090805-55090824 | Msa1255830:intron | 30.0% | |
| AGAAAAACAGTAAGTAACCA+CGG | - | chr8_2:55090956-55090975 | None:intergenic | 30.0% | |
| TTCTTTAGTAACTCATCTCT+TGG | + | chr8_2:55090975-55090994 | Msa1255830:intron | 30.0% | |
| TCAAATCTTTACCAACAGTT+CGG | + | chr8_2:55091050-55091069 | Msa1255830:CDS | 30.0% | |
| ! | TGTCATCATTTTATGTGACT+AGG | + | chr8_2:55091085-55091104 | Msa1255830:intron | 30.0% |
| ! | GTCATCATTTTATGTGACTA+GGG | + | chr8_2:55091086-55091105 | Msa1255830:intron | 30.0% |
| !! | TGCATTCAAGACTTTAGTTT+TGG | + | chr8_2:55091321-55091340 | Msa1255830:intron | 30.0% |
| TAAAATAGTCATTCACAAGG+TGG | - | chr8_2:55091481-55091500 | None:intergenic | 30.0% | |
| AGAATGTGACACATTATAAC+AGG | - | chr8_2:55091691-55091710 | None:intergenic | 30.0% | |
| CAGGCCTGTAAATTAAAATT+AGG | + | chr8_2:55091767-55091786 | Msa1255830:intron | 30.0% | |
| AGAGTTTCAATAGAGAAAGT+AGG | + | chr8_2:55091888-55091907 | Msa1255830:intron | 30.0% | |
| ATAGATGACATTGTTGAACA+CGG | - | chr8_2:55091924-55091943 | None:intergenic | 30.0% | |
| ! | CATAGAACTTTTATGCTACT+AGG | + | chr8_2:55092022-55092041 | Msa1255830:intron | 30.0% |
| CTGGTGTGAATTGTTTAATA+GGG | + | chr8_2:55092087-55092106 | Msa1255830:intron | 30.0% | |
| AATTGTTTAATAGGGAGGAA+AGG | + | chr8_2:55092095-55092114 | Msa1255830:intron | 30.0% | |
| ATTGTTTAATAGGGAGGAAA+GGG | + | chr8_2:55092096-55092115 | Msa1255830:intron | 30.0% | |
| AATTTGTACCAAGATGGATA+GGG | - | chr8_2:55092142-55092161 | None:intergenic | 30.0% | |
| TTTGTCAATTTGTACCAAGA+TGG | - | chr8_2:55092148-55092167 | None:intergenic | 30.0% | |
| TTACAATTCGGTACTTAAGA+AGG | - | chr8_2:55092238-55092257 | None:intergenic | 30.0% | |
| TGATAACTATAACCAGTCAT+AGG | + | chr8_2:55092422-55092441 | Msa1255830:intron | 30.0% | |
| GATAACTATAACCAGTCATA+GGG | + | chr8_2:55092423-55092442 | Msa1255830:intron | 30.0% | |
| ATAACTATAACCAGTCATAG+GGG | + | chr8_2:55092424-55092443 | Msa1255830:intron | 30.0% | |
| !! | TTTTTGGTCTGCTTAATTTC+AGG | + | chr8_2:55092515-55092534 | Msa1255830:intron | 30.0% |
| TTTATTTCATTCATTGCCTG+TGG | + | chr8_2:55092641-55092660 | Msa1255830:intron | 30.0% | |
| GTCAAAGTGTAAATGGAATT+AGG | + | chr8_2:55093039-55093058 | Msa1255830:intron | 30.0% | |
| ATTGAGATCCAAAACATCTT+TGG | + | chr8_2:55093112-55093131 | Msa1255830:intron | 30.0% | |
| ! | GTCATAATCCAAAGATGTTT+TGG | - | chr8_2:55093123-55093142 | None:intergenic | 30.0% |
| GAAATGGTAAAGGAAGAAAA+AGG | - | chr8_2:55093282-55093301 | None:intergenic | 30.0% | |
| ! | CTGAAACAATCAGATTTTTG+TGG | + | chr8_2:55093450-55093469 | Msa1255830:three_prime_UTR | 30.0% |
| CTCTGTTATAGAAAATCACT+AGG | - | chr8_2:55093628-55093647 | None:intergenic | 30.0% | |
| TTTCGGAAGAGAGGAAAAAA+GGG | - | chr8_2:55089827-55089846 | None:intergenic | 35.0% | |
| ! | TTTTCGGAAGAGAGGAAAAA+AGG | - | chr8_2:55089828-55089847 | None:intergenic | 35.0% |
| TTATGTCGAAGTACACTCTT+GGG | - | chr8_2:55089858-55089877 | None:intergenic | 35.0% | |
| TGGATTTCTTGAAATGGAGA+GGG | - | chr8_2:55090005-55090024 | None:intergenic | 35.0% | |
| ATGGATTTCTTGAAATGGAG+AGG | - | chr8_2:55090006-55090025 | None:intergenic | 35.0% | |
| ! | GGAAGATGGATTTCTTGAAA+TGG | - | chr8_2:55090011-55090030 | None:intergenic | 35.0% |
| ATTTCGACCTAAAACACGAA+CGG | + | chr8_2:55090130-55090149 | Msa1255830:CDS | 35.0% | |
| ! | ATTTTATCCATGGCGAATAC+CGG | + | chr8_2:55090159-55090178 | Msa1255830:CDS | 35.0% |
| !!! | AGTTTTTTATTACGACGACG+AGG | + | chr8_2:55090202-55090221 | Msa1255830:CDS | 35.0% |
| ! | ATGTTGTGATTGCTGATTGT+GGG | + | chr8_2:55090337-55090356 | Msa1255830:CDS | 35.0% |
| ! | ATGGTGATACTTTTGCTGAT+TGG | + | chr8_2:55090406-55090425 | Msa1255830:CDS | 35.0% |
| GAATGCTGTTGAATCTATCA+AGG | + | chr8_2:55090473-55090492 | Msa1255830:CDS | 35.0% | |
| AACTACACAACTAAAGCTTG+TGG | - | chr8_2:55091184-55091203 | None:intergenic | 35.0% | |
| ! | AGCTTTAGTTGTGTAGTTAG+AGG | + | chr8_2:55091186-55091205 | Msa1255830:intron | 35.0% |
| ATCAATTATTGAAAGTCGGC+TGG | - | chr8_2:55091260-55091279 | None:intergenic | 35.0% | |
| TAGGTCTGCATGATTCAAAA+TGG | + | chr8_2:55091644-55091663 | Msa1255830:intron | 35.0% | |
| TTAAAATTAGGTGACCTCAG+TGG | + | chr8_2:55091779-55091798 | Msa1255830:CDS | 35.0% | |
| GCATACAATATGACTGTATG+AGG | - | chr8_2:55092068-55092087 | None:intergenic | 35.0% | |
| CATACAGTCATATTGTATGC+TGG | + | chr8_2:55092068-55092087 | Msa1255830:intron | 35.0% | |
| GCTGGTGTGAATTGTTTAAT+AGG | + | chr8_2:55092086-55092105 | Msa1255830:intron | 35.0% | |
| GTGTGAATTGTTTAATAGGG+AGG | + | chr8_2:55092090-55092109 | Msa1255830:intron | 35.0% | |
| CAATTTGTACCAAGATGGAT+AGG | - | chr8_2:55092143-55092162 | None:intergenic | 35.0% | |
| TGACAAAAAGTTTAAGGGGA+AGG | + | chr8_2:55092161-55092180 | Msa1255830:intron | 35.0% | |
| GACAAAAAGTTTAAGGGGAA+GGG | + | chr8_2:55092162-55092181 | Msa1255830:intron | 35.0% | |
| !!! | TTGATGGTTTTGACTTTTGG+AGG | - | chr8_2:55092298-55092317 | None:intergenic | 35.0% |
| CAGACTTCCCATAAATTTGA+TGG | - | chr8_2:55092314-55092333 | None:intergenic | 35.0% | |
| TTCTGTAAGAAAAAGGGGAA+GGG | - | chr8_2:55092385-55092404 | None:intergenic | 35.0% | |
| GGTTATAGTTATCAATTCCC+TGG | - | chr8_2:55092416-55092435 | None:intergenic | 35.0% | |
| GTATATGTTACTCAATGACC+TGG | + | chr8_2:55092539-55092558 | Msa1255830:CDS | 35.0% | |
| AATAGTCACCAACCATCATT+TGG | - | chr8_2:55092606-55092625 | None:intergenic | 35.0% | |
| !! | TGAAAAGCATTTATGACCAC+AGG | - | chr8_2:55092660-55092679 | None:intergenic | 35.0% |
| TTGAGTGTAATGAACTTCCT+GGG | + | chr8_2:55092743-55092762 | Msa1255830:intron | 35.0% | |
| ! | AAACATATCTTTGGCTTACC+AGG | + | chr8_2:55092804-55092823 | Msa1255830:intron | 35.0% |
| ! | AACATATCTTTGGCTTACCA+GGG | + | chr8_2:55092805-55092824 | Msa1255830:intron | 35.0% |
| GAAGGAGTCTATTCATGATA+AGG | + | chr8_2:55092830-55092849 | Msa1255830:intron | 35.0% | |
| ! | ACTATTTCTTGTCTCGACAT+CGG | - | chr8_2:55092857-55092876 | None:intergenic | 35.0% |
| ATTGTGGAAATGATGTGACT+TGG | - | chr8_2:55092982-55093001 | None:intergenic | 35.0% | |
| ! | GACAGCATTTGAAATGGTAA+AGG | - | chr8_2:55093292-55093311 | None:intergenic | 35.0% |
| GAACAAGACAGCATTTGAAA+TGG | - | chr8_2:55093298-55093317 | None:intergenic | 35.0% | |
| !! | TGTTTACTGCTTTTGGTTAC+AGG | + | chr8_2:55093341-55093360 | Msa1255830:intron | 35.0% |
| !! | ATGTTCAATTAGCCTTGATG+CGG | + | chr8_2:55093405-55093424 | Msa1255830:exon | 35.0% |
| GCTCAAAGAGTTTGTCAAAA+TGG | - | chr8_2:55093601-55093620 | None:intergenic | 35.0% | |
| CTTATGTCGAAGTACACTCT+TGG | - | chr8_2:55089859-55089878 | None:intergenic | 40.0% | |
| GTGTACTTCGACATAAGCAT+CGG | + | chr8_2:55089862-55089881 | Msa1255830:CDS | 40.0% | |
| ! | GCAGAGAGATCGGAAATTTT+CGG | - | chr8_2:55089947-55089966 | None:intergenic | 40.0% |
| ACCTAAAACACGAACGGAAA+GGG | + | chr8_2:55090136-55090155 | Msa1255830:CDS | 40.0% | |
| ! | ACGGAAAGGGATTTTATCCA+TGG | + | chr8_2:55090149-55090168 | Msa1255830:CDS | 40.0% |
| TGTTTGGGAAGGTTGTGAAA+GGG | + | chr8_2:55090253-55090272 | Msa1255830:CDS | 40.0% | |
| TGAAAGGGATTGGAGTTGTT+AGG | + | chr8_2:55090268-55090287 | Msa1255830:CDS | 40.0% | |
| ! | GATGTTGTGATTGCTGATTG+TGG | + | chr8_2:55090336-55090355 | Msa1255830:CDS | 40.0% |
| ! | TGTTGTGATTGCTGATTGTG+GGG | + | chr8_2:55090338-55090357 | Msa1255830:CDS | 40.0% |
| TGTTGATCTTGATACCAAGC+CGG | + | chr8_2:55090431-55090450 | Msa1255830:CDS | 40.0% | |
| GTTGAATCTATCAAGGGCTT+TGG | + | chr8_2:55090480-55090499 | Msa1255830:CDS | 40.0% | |
| !!! | GGGAATATAGTGGCTAGTTT+TGG | + | chr8_2:55090724-55090743 | Msa1255830:intron | 40.0% |
| ! | TGATCTGCTGATTACCTTTG+TGG | + | chr8_2:55090756-55090775 | Msa1255830:intron | 40.0% |
| AATGCATCAGCATACCACAA+AGG | - | chr8_2:55090773-55090792 | None:intergenic | 40.0% | |
| !! | GGCTATCAAAAAGTATCGCA+AGG | + | chr8_2:55090826-55090845 | Msa1255830:CDS | 40.0% |
| !! | GATCTGTGCTGTTCTGTTTT+TGG | + | chr8_2:55090924-55090943 | Msa1255830:intron | 40.0% |
| TGTGATACTTACCGAACTGT+TGG | - | chr8_2:55091064-55091083 | None:intergenic | 40.0% | |
| GACTTGTCTCGTCAACTATT+AGG | + | chr8_2:55091117-55091136 | Msa1255830:intron | 40.0% | |
| ATAGTCATTCACAAGGTGGT+AGG | - | chr8_2:55091477-55091496 | None:intergenic | 40.0% | |
| AAGCAGACCTACTCAGAAAA+GGG | - | chr8_2:55091616-55091635 | None:intergenic | 40.0% | |
| TAGGTCTGCTTCATTCAACT+AGG | + | chr8_2:55091625-55091644 | Msa1255830:intron | 40.0% | |
| AATCAAGTAAAGCTCCACTG+AGG | - | chr8_2:55091796-55091815 | None:intergenic | 40.0% | |
| CAGTGGAGCTTTACTTGATT+CGG | + | chr8_2:55091796-55091815 | Msa1255830:CDS | 40.0% | |
| TCTATTGAAAGATGCCAACC+TGG | - | chr8_2:55091871-55091890 | None:intergenic | 40.0% | |
| TTAATAGGGAGGAAAGGGTA+AGG | + | chr8_2:55092101-55092120 | Msa1255830:intron | 40.0% | |
| AGGAAAGGGTAAGGAAAAGA+AGG | + | chr8_2:55092110-55092129 | Msa1255830:CDS | 40.0% | |
| GGAAAGGGTAAGGAAAAGAA+GGG | + | chr8_2:55092111-55092130 | Msa1255830:CDS | 40.0% | |
| TAAGAAAAAGGGGAAGGGAA+TGG | - | chr8_2:55092380-55092399 | None:intergenic | 40.0% | |
| GTTCTGTAAGAAAAAGGGGA+AGG | - | chr8_2:55092386-55092405 | None:intergenic | 40.0% | |
| TGGGGGTTCTGTAAGAAAAA+GGG | - | chr8_2:55092391-55092410 | None:intergenic | 40.0% | |
| AGTTATCAATTCCCTGGTCT+GGG | - | chr8_2:55092410-55092429 | None:intergenic | 40.0% | |
| TAGTTATCAATTCCCTGGTC+TGG | - | chr8_2:55092411-55092430 | None:intergenic | 40.0% | |
| CATGATATATCCCCTATGAC+TGG | - | chr8_2:55092437-55092456 | None:intergenic | 40.0% | |
| !! | CTTCAAGAGAGCATTAGAGT+TGG | + | chr8_2:55092578-55092597 | Msa1255830:CDS | 40.0% |
| TTAGAGTTGGAGCCAAATGA+TGG | + | chr8_2:55092591-55092610 | Msa1255830:CDS | 40.0% | |
| GTTGAGTGTAATGAACTTCC+TGG | + | chr8_2:55092742-55092761 | Msa1255830:intron | 40.0% | |
| ! | TACAGCTTTATCAAGAACCC+AGG | - | chr8_2:55092763-55092782 | None:intergenic | 40.0% |
| GGGTTCTTGATAAAGCTGTA+AGG | + | chr8_2:55092763-55092782 | Msa1255830:intron | 40.0% | |
| ! | CTATTTCTTGTCTCGACATC+GGG | - | chr8_2:55092856-55092875 | None:intergenic | 40.0% |
| ACACAACAATGAAAGGGTGA+GGG | - | chr8_2:55092907-55092926 | None:intergenic | 40.0% | |
| AACACAACAATGAAAGGGTG+AGG | - | chr8_2:55092908-55092927 | None:intergenic | 40.0% | |
| CGTTTGTAAATCGTCCTGTT+CGG | + | chr8_2:55092943-55092962 | Msa1255830:intron | 40.0% | |
| GTTTGTAAATCGTCCTGTTC+GGG | + | chr8_2:55092944-55092963 | Msa1255830:intron | 40.0% | |
| ! | AAAAAGAGTACGCAATTGCC+AGG | + | chr8_2:55093238-55093257 | Msa1255830:CDS | 40.0% |
| TGTATTACTGACCTTCTTCC+TGG | - | chr8_2:55093259-55093278 | None:intergenic | 40.0% | |
| GGTTGCTGATAGACATGATA+AGG | + | chr8_2:55093362-55093381 | Msa1255830:intron | 40.0% | |
| !! | AATTAGCCTTGATGCGGATA+TGG | + | chr8_2:55093411-55093430 | Msa1255830:exon | 40.0% |
| GAAAACTTGTCAGTTGTGAC+TGG | - | chr8_2:55093720-55093739 | None:intergenic | 40.0% | |
| ! | ACTCTTGGGTTCGGCATTTT+CGG | - | chr8_2:55089844-55089863 | None:intergenic | 45.0% |
| TCGAAGTACACTCTTGGGTT+CGG | - | chr8_2:55089853-55089872 | None:intergenic | 45.0% | |
| !! | TACTTCGACATAAGCATCGG+CGG | + | chr8_2:55089865-55089884 | Msa1255830:CDS | 45.0% |
| ! | CGGAAATTTTCGGCGGTTTT+GGG | - | chr8_2:55089937-55089956 | None:intergenic | 45.0% |
| ! | TCGGAAATTTTCGGCGGTTT+TGG | - | chr8_2:55089938-55089957 | None:intergenic | 45.0% |
| ! | GAGAGATCGGAAATTTTCGG+CGG | - | chr8_2:55089944-55089963 | None:intergenic | 45.0% |
| AATTTCCGATCTCTCTGCAC+CGG | + | chr8_2:55089949-55089968 | Msa1255830:CDS | 45.0% | |
| TCATGAAGCCTTTGACGACA+CGG | - | chr8_2:55090035-55090054 | None:intergenic | 45.0% | |
| GTCAAAGGCTTCATGATCCA+AGG | + | chr8_2:55090039-55090058 | Msa1255830:CDS | 45.0% | |
| AAAGGCTTCATGATCCAAGG+CGG | + | chr8_2:55090042-55090061 | Msa1255830:CDS | 45.0% | |
| GACCTAAAACACGAACGGAA+AGG | + | chr8_2:55090135-55090154 | Msa1255830:CDS | 45.0% | |
| ! | TCCCTTTCCGTTCGTGTTTT+AGG | - | chr8_2:55090140-55090159 | None:intergenic | 45.0% |
| AATACCGGTCCAAACACCAA+TGG | + | chr8_2:55090174-55090193 | Msa1255830:CDS | 45.0% | |
| ATACCGGTCCAAACACCAAT+GGG | + | chr8_2:55090175-55090194 | Msa1255830:CDS | 45.0% | |
| ! | AACTGACTCCCATTGGTGTT+TGG | - | chr8_2:55090186-55090205 | None:intergenic | 45.0% |
| ACATGCTTCCCATCCAAATG+CGG | - | chr8_2:55090231-55090250 | None:intergenic | 45.0% | |
| ! | ATGGGAAGCATGTGGTGTTT+GGG | + | chr8_2:55090238-55090257 | Msa1255830:CDS | 45.0% |
| GTGTTTGGGAAGGTTGTGAA+AGG | + | chr8_2:55090252-55090271 | Msa1255830:CDS | 45.0% | |
| GTTGTTAGGTCTGTTGAGCT+TGG | + | chr8_2:55090282-55090301 | Msa1255830:CDS | 45.0% | |
| ATTGTGGGGAGATTGCTGAA+GGG | + | chr8_2:55090352-55090371 | Msa1255830:CDS | 45.0% | |
| ! | GGCTTGGTATCAAGATCAAC+AGG | - | chr8_2:55090432-55090451 | None:intergenic | 45.0% |
| ATCCACCATTCAAGCTCATC+CGG | - | chr8_2:55090453-55090472 | None:intergenic | 45.0% | |
| TGCGCTATTTGGACATGTGT+TGG | + | chr8_2:55090852-55090871 | Msa1255830:CDS | 45.0% | |
| GCGCTATTTGGACATGTGTT+GGG | + | chr8_2:55090853-55090872 | Msa1255830:CDS | 45.0% | |
| TTTGGACATGTGTTGGGAGA+AGG | + | chr8_2:55090859-55090878 | Msa1255830:CDS | 45.0% | |
| AAACTAACGAGAACCGACCT+TGG | - | chr8_2:55090895-55090914 | None:intergenic | 45.0% | |
| !!! | TCTGTTTTTGGTTGTTGCCG+TGG | + | chr8_2:55090936-55090955 | Msa1255830:intron | 45.0% |
| !! | CAGAGAAGAGCACTGCTTTA+AGG | + | chr8_2:55091016-55091035 | Msa1255830:intron | 45.0% |
| CTCTTAGGGCCAAACTAACA+AGG | + | chr8_2:55091537-55091556 | Msa1255830:intron | 45.0% | |
| TAGGGCCAAACTAACAAGGT+TGG | + | chr8_2:55091541-55091560 | Msa1255830:intron | 45.0% | |
| ! | GCCAAACTAACAAGGTTGGT+GGG | + | chr8_2:55091545-55091564 | Msa1255830:intron | 45.0% |
| !! | CCAAACTAACAAGGTTGGTG+GGG | + | chr8_2:55091546-55091565 | Msa1255830:intron | 45.0% |
| GAAGCAGACCTACTCAGAAA+AGG | - | chr8_2:55091617-55091636 | None:intergenic | 45.0% | |
| GCAAAAGCTCTGTTTCGCAA+AGG | + | chr8_2:55091845-55091864 | Msa1255830:CDS | 45.0% | |
| GGGTAAAACCCTATCCATCT+TGG | + | chr8_2:55092131-55092150 | Msa1255830:CDS | 45.0% | |
| GGGGGTTCTGTAAGAAAAAG+GGG | - | chr8_2:55092390-55092409 | None:intergenic | 45.0% | |
| CTGGGGGTTCTGTAAGAAAA+AGG | - | chr8_2:55092392-55092411 | None:intergenic | 45.0% | |
| TTATCAATTCCCTGGTCTGG+GGG | - | chr8_2:55092408-55092427 | None:intergenic | 45.0% | |
| GTTATCAATTCCCTGGTCTG+GGG | - | chr8_2:55092409-55092428 | None:intergenic | 45.0% | |
| TCTCTTGAAGCTATCCAGAG+CGG | - | chr8_2:55092568-55092587 | None:intergenic | 45.0% | |
| AGTTGGAGCCAAATGATGGT+TGG | + | chr8_2:55092595-55092614 | Msa1255830:intron | 45.0% | |
| TTATAACACTGGGGTCCTGA+GGG | + | chr8_2:55092711-55092730 | Msa1255830:intron | 45.0% | |
| TGAATAGACTCCTTCAACCC+TGG | - | chr8_2:55092825-55092844 | None:intergenic | 45.0% | |
| !! | GAGGATTTGTTAACCCGAAC+AGG | - | chr8_2:55092960-55092979 | None:intergenic | 45.0% |
| ! | GTGGAAATGATGTGACTTGG+AGG | - | chr8_2:55092979-55092998 | None:intergenic | 45.0% |
| CATACCTTGCTCTGTTCTTC+AGG | + | chr8_2:55093207-55093226 | Msa1255830:intron | 45.0% | |
| CATACACCATATCCGCATCA+AGG | - | chr8_2:55093420-55093439 | None:intergenic | 45.0% | |
| TGATGCGGATATGGTGTATG+TGG | + | chr8_2:55093420-55093439 | Msa1255830:three_prime_UTR | 45.0% | |
| ! | GTTCGGCATTTTCGGAAGAG+AGG | - | chr8_2:55089836-55089855 | None:intergenic | 50.0% |
| CTTGAAATGGAGAGGGACGT+TGG | - | chr8_2:55089998-55090017 | None:intergenic | 50.0% | |
| TTTGACGACACGGTGGAAGA+TGG | - | chr8_2:55090025-55090044 | None:intergenic | 50.0% | |
| ATCTTCCACCGTGTCGTCAA+AGG | + | chr8_2:55090024-55090043 | Msa1255830:CDS | 50.0% | |
| ! | ACTCCCATTGGTGTTTGGAC+CGG | - | chr8_2:55090181-55090200 | None:intergenic | 50.0% |
| ! | GCATTTGGATGGGAAGCATG+TGG | + | chr8_2:55090230-55090249 | Msa1255830:CDS | 50.0% |
| ! | GATGGGAAGCATGTGGTGTT+TGG | + | chr8_2:55090237-55090256 | Msa1255830:CDS | 50.0% |
| GAAGCATGTGGTGTTTGGGA+AGG | + | chr8_2:55090242-55090261 | Msa1255830:CDS | 50.0% | |
| GGGAAGGTTGTGAAAGGGAT+TGG | + | chr8_2:55090258-55090277 | Msa1255830:CDS | 50.0% | |
| TAGGTCTGTTGAGCTTGGTC+CGG | + | chr8_2:55090287-55090306 | Msa1255830:CDS | 50.0% | |
| GCAATCACAACATCCTGCTC+CGG | - | chr8_2:55090330-55090349 | None:intergenic | 50.0% | |
| GATTGTGGGGAGATTGCTGA+AGG | + | chr8_2:55090351-55090370 | Msa1255830:CDS | 50.0% | |
| TTGTGGGGAGATTGCTGAAG+GGG | + | chr8_2:55090353-55090372 | Msa1255830:CDS | 50.0% | |
| ATTGCTGAAGGGGAGGATGA+AGG | + | chr8_2:55090363-55090382 | Msa1255830:CDS | 50.0% | |
| TTGCTGAAGGGGAGGATGAA+GGG | + | chr8_2:55090364-55090383 | Msa1255830:CDS | 50.0% | |
| TCGCAAGGCTTTGCGCTATT+TGG | + | chr8_2:55090841-55090860 | Msa1255830:CDS | 50.0% | |
| GACATGTGTTGGGAGAAGGA+TGG | + | chr8_2:55090863-55090882 | Msa1255830:CDS | 50.0% | |
| !! | GAGAAGGATGGTGTTGACCA+AGG | + | chr8_2:55090875-55090894 | Msa1255830:CDS | 50.0% |
| !! | AGGATGGTGTTGACCAAGGT+CGG | + | chr8_2:55090879-55090898 | Msa1255830:intron | 50.0% |
| ACCCACATTGCACACGTGAT+TGG | + | chr8_2:55091387-55091406 | Msa1255830:intron | 50.0% | |
| GCCAATCACGTGTGCAATGT+GGG | - | chr8_2:55091391-55091410 | None:intergenic | 50.0% | |
| AGCCAATCACGTGTGCAATG+TGG | - | chr8_2:55091392-55091411 | None:intergenic | 50.0% | |
| TGTCCTGTGCCTGATTTCTC+CGG | + | chr8_2:55091448-55091467 | Msa1255830:intron | 50.0% | |
| GGCCAAACTAACAAGGTTGG+TGG | + | chr8_2:55091544-55091563 | Msa1255830:intron | 50.0% | |
| CCCCACCAACCTTGTTAGTT+TGG | - | chr8_2:55091549-55091568 | None:intergenic | 50.0% | |
| ! | CTCACTGCCCTTTTCTGAGT+AGG | + | chr8_2:55091606-55091625 | Msa1255830:intron | 50.0% |
| TCGGACTTTGCAATGCACGA+TGG | + | chr8_2:55091815-55091834 | Msa1255830:CDS | 50.0% | |
| CTTATAACACTGGGGTCCTG+AGG | + | chr8_2:55092710-55092729 | Msa1255830:intron | 50.0% | |
| ! | CTTTGGCTTACCAGGGTTGA+AGG | + | chr8_2:55092812-55092831 | Msa1255830:intron | 50.0% |
| ACCTTGCTCTGTTCTTCAGG+AGG | + | chr8_2:55093210-55093229 | Msa1255830:intron | 50.0% | |
| CCTTGCTCTGTTCTTCAGGA+GGG | + | chr8_2:55093211-55093230 | Msa1255830:intron | 50.0% | |
| GTACGCAATTGCCAGGAAGA+AGG | + | chr8_2:55093245-55093264 | Msa1255830:CDS | 50.0% | |
| GGATATGGTGTATGTGGCGA+TGG | + | chr8_2:55093426-55093445 | Msa1255830:three_prime_UTR | 50.0% | |
| !!! | GGCGGTTTTGGGAACGACAT+CGG | - | chr8_2:55089926-55089945 | None:intergenic | 55.0% |
| TTTCGCCGGTGCAGAGAGAT+CGG | - | chr8_2:55089957-55089976 | None:intergenic | 55.0% | |
| ! | TCTCTCTGCACCGGCGAAAA+AGG | + | chr8_2:55089958-55089977 | Msa1255830:CDS | 55.0% |
| ! | TGCACCGGCGAAAAAGGCAT+CGG | + | chr8_2:55089964-55089983 | Msa1255830:CDS | 55.0% |
| !! | TGGACCGATGCCTTTTTCGC+CGG | - | chr8_2:55089971-55089990 | None:intergenic | 55.0% |
| TGAAGCCTTTGACGACACGG+TGG | - | chr8_2:55090032-55090051 | None:intergenic | 55.0% | |
| GTTTGGACCGGTATTCGCCA+TGG | - | chr8_2:55090169-55090188 | None:intergenic | 55.0% | |
| TCTGTTGAGCTTGGTCCGGT+TGG | + | chr8_2:55090291-55090310 | Msa1255830:CDS | 55.0% | |
| CTGTTGAGCTTGGTCCGGTT+GGG | + | chr8_2:55090292-55090311 | Msa1255830:CDS | 55.0% | |
| TGTTGAGCTTGGTCCGGTTG+GGG | + | chr8_2:55090293-55090312 | Msa1255830:CDS | 55.0% | |
| GGTCGATCATTCTCCCCAAC+CGG | - | chr8_2:55090309-55090328 | None:intergenic | 55.0% | |
| GGTTGGGGAGAATGATCGAC+CGG | + | chr8_2:55090308-55090327 | Msa1255830:CDS | 55.0% | |
| TGCTGAAGGGGAGGATGAAG+GGG | + | chr8_2:55090365-55090384 | Msa1255830:CDS | 55.0% | |
| CCATTCAAGCTCATCCGGCT+TGG | - | chr8_2:55090448-55090467 | None:intergenic | 55.0% | |
| CCAAGCCGGATGAGCTTGAA+TGG | + | chr8_2:55090445-55090464 | Msa1255830:CDS | 55.0% | |
| AGCCGGATGAGCTTGAATGG+TGG | + | chr8_2:55090448-55090467 | Msa1255830:CDS | 55.0% | |
| TTCACAAGGTGGTAGGCCAC+CGG | - | chr8_2:55091470-55091489 | None:intergenic | 55.0% | |
| AGCTCTGTTTCGCAAAGGCC+AGG | + | chr8_2:55091850-55091869 | Msa1255830:CDS | 55.0% | |
| CTGTTTCGCAAAGGCCAGGT+TGG | + | chr8_2:55091854-55091873 | Msa1255830:intron | 55.0% | |
| TCTTACAGAACCCCCAGACC+AGG | + | chr8_2:55092395-55092414 | Msa1255830:intron | 55.0% | |
| CTTACAGAACCCCCAGACCA+GGG | + | chr8_2:55092396-55092415 | Msa1255830:intron | 55.0% | |
| ACTCAACAACAGCCTCCCTC+AGG | - | chr8_2:55092729-55092748 | None:intergenic | 55.0% | |
| CCCTCCTGAAGAACAGAGCA+AGG | - | chr8_2:55093214-55093233 | None:intergenic | 55.0% | |
| !! | AAGCATCGGCGGTGAACTCG+AGG | + | chr8_2:55089876-55089895 | Msa1255830:CDS | 60.0% |
| !! | AGCATCGGCGGTGAACTCGA+GGG | + | chr8_2:55089877-55089896 | Msa1255830:CDS | 60.0% |
| TGGAGAGGGACGTTGGTGTG+TGG | - | chr8_2:55089991-55090010 | None:intergenic | 60.0% | |
| ACCGGCGGCGAGTCAATCTA+CGG | + | chr8_2:55090087-55090106 | Msa1255830:CDS | 60.0% | |
| !! | ACCGTAGATTGACTCGCCGC+CGG | - | chr8_2:55090091-55090110 | None:intergenic | 60.0% |
| ACGAGGACGCCGCATTTGGA+TGG | + | chr8_2:55090219-55090238 | Msa1255830:CDS | 60.0% | |
| CGAGGACGCCGCATTTGGAT+GGG | + | chr8_2:55090220-55090239 | Msa1255830:CDS | 60.0% | |
| GGAGAATGATCGACCGGAGC+AGG | + | chr8_2:55090314-55090333 | Msa1255830:CDS | 60.0% | |
| TGGGGAGATTGCTGAAGGGG+AGG | + | chr8_2:55090356-55090375 | Msa1255830:CDS | 60.0% | |
| CCACCGGAGAAATCAGGCAC+AGG | - | chr8_2:55091454-55091473 | None:intergenic | 60.0% | |
| CCTGTGCCTGATTTCTCCGG+TGG | + | chr8_2:55091451-55091470 | Msa1255830:intron | 60.0% | |
| GGTAGGCCACCGGAGAAATC+AGG | - | chr8_2:55091460-55091479 | None:intergenic | 60.0% | |
| CAATGACCTGGATGCCGCTC+TGG | + | chr8_2:55092551-55092570 | Msa1255830:CDS | 60.0% | |
| AGCTATCCAGAGCGGCATCC+AGG | - | chr8_2:55092560-55092579 | None:intergenic | 60.0% | |
| TAACACTGGGGTCCTGAGGG+AGG | + | chr8_2:55092714-55092733 | Msa1255830:intron | 60.0% | |
| AGGCGGAGATGTCACCGCCT+TGG | - | chr8_2:55090059-55090078 | None:intergenic | 65.0% | |
| GGTGACATCTCCGCCTCCGA+CGG | + | chr8_2:55090063-55090082 | Msa1255830:CDS | 65.0% | |
| ATCTCCGCCTCCGACGGAAC+CGG | + | chr8_2:55090069-55090088 | Msa1255830:CDS | 65.0% | |
| GACGACGAGGACGCCGCATT+TGG | + | chr8_2:55090215-55090234 | Msa1255830:CDS | 65.0% | |
| !! | TGACTCGCCGCCGGTTCCGT+CGG | - | chr8_2:55090082-55090101 | None:intergenic | 70.0% |
| TCCGCCTCCGACGGAACCGG+CGG | + | chr8_2:55090072-55090091 | Msa1255830:CDS | 75.0% | |
| !!! | GCCGCCGGTTCCGTCGGAGG+CGG | - | chr8_2:55090076-55090095 | None:intergenic | 80.0% |
| !!! | CTCGCCGCCGGTTCCGTCGG+AGG | - | chr8_2:55090079-55090098 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 55089794 | 55093748 | 55089794 | ID=Msa1255830;Name=Msa1255830 |
| chr8_2 | mRNA | 55089794 | 55093748 | 55089794 | ID=Msa1255830-mRNA-1;Parent=Msa1255830;Name=Msa1255830-mRNA-1;_AED=0.04;_eAED=0.04;_QI=53|0.71|0.87|0.87|1|1|8|332|375 |
| chr8_2 | exon | 55089794 | 55090518 | 55089794 | ID=Msa1255830-mRNA-1:exon:17002;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55090809 | 55090896 | 55090809 | ID=Msa1255830-mRNA-1:exon:17003;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55091019 | 55091071 | 55091019 | ID=Msa1255830-mRNA-1:exon:17004;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55091770 | 55091871 | 55091770 | ID=Msa1255830-mRNA-1:exon:17005;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55092108 | 55092152 | 55092108 | ID=Msa1255830-mRNA-1:exon:17006;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55092537 | 55092612 | 55092537 | ID=Msa1255830-mRNA-1:exon:17007;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55093229 | 55093266 | 55093229 | ID=Msa1255830-mRNA-1:exon:17008;Parent=Msa1255830-mRNA-1 |
| chr8_2 | exon | 55093363 | 55093748 | 55093363 | ID=Msa1255830-mRNA-1:exon:17009;Parent=Msa1255830-mRNA-1 |
| chr8_2 | five_prime_UTR | 55089794 | 55089846 | 55089794 | ID=Msa1255830-mRNA-1:five_prime_utr;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55089847 | 55090518 | 55089847 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55090809 | 55090896 | 55090809 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55091019 | 55091071 | 55091019 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55091770 | 55091871 | 55091770 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55092108 | 55092152 | 55092108 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55092537 | 55092612 | 55092537 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55093229 | 55093266 | 55093229 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | CDS | 55093363 | 55093416 | 55093363 | ID=Msa1255830-mRNA-1:cds;Parent=Msa1255830-mRNA-1 |
| chr8_2 | three_prime_UTR | 55093417 | 55093748 | 55093417 | ID=Msa1255830-mRNA-1:three_prime_utr;Parent=Msa1255830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
