AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0182100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182100 MtrunA17_Chr1g0201721 99.743 389 1 0 23 411 1 389 0.0 798
Msa0182100 MtrunA17_Chr4g0051121 90.746 389 36 0 23 411 1 389 0.0 723
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0182100 AT1G43170.1 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.6 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.2 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.3 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.9 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.8 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.7 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G43170.5 87.339 387 49 0 23 409 1 387 0.0 696
Msa0182100 AT1G61580.1 85.492 386 56 0 23 408 1 386 0.0 685
Msa0182100 AT1G43170.4 86.054 294 41 0 116 409 11 304 0.0 542

Find 137 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCATTATACTTCCAATTT+TGG 0.152169 1_4:+70525186 Msa0182100:three_prime_UTR
GGCTTGGTTGGGTCATCCTT+GGG 0.196053 1_4:-70522599 None:intergenic
AAGGAATAAAACACCAAAAT+TGG 0.248184 1_4:-70525199 None:intergenic
TCACTTGAATCTCCATGATA+TGG 0.254331 1_4:-70524210 None:intergenic
TGGCTTGGTTGGGTCATCCT+TGG 0.260735 1_4:-70522600 None:intergenic
TGTCAATCATTTCATCCTTC+TGG 0.271486 1_4:-70524309 None:intergenic
CTTGCTGAAAGCCTTCTTCT+TGG 0.282480 1_4:-70523333 None:intergenic
ATCGATACCTCTTCCAAGTT+TGG 0.285033 1_4:+70524934 Msa0182100:CDS
ACCCAAGCTAACTGCCTTCT+TGG 0.286054 1_4:+70522622 Msa0182100:CDS
GCACCCAAGACACGGTTCTT+TGG 0.287363 1_4:+70522121 Msa0182100:CDS
CACCCAAGACACGGTTCTTT+GGG 0.292688 1_4:+70522122 Msa0182100:CDS
AAAGAACTGCAGTAATAAAT+AGG 0.307287 1_4:-70525140 None:intergenic
TGACGAGCAGCACGCTTTCT+TGG 0.308401 1_4:-70522152 None:intergenic
GTTAGCTTGGGTGGCTTGGT+TGG 0.310280 1_4:-70522611 None:intergenic
TCAGTTTCTCAAGCTGGGTC+TGG 0.325691 1_4:-70523397 None:intergenic
CACCAAAATTGGAAGTATAA+TGG 0.325747 1_4:-70525188 None:intergenic
TATCTCAGAGCTTCACAAAA+AGG 0.335186 1_4:+70523148 Msa0182100:intron
TTGAGGAAGGTTGCATGTAT+TGG 0.358668 1_4:+70524418 Msa0182100:CDS
GACGCCTCAAAGCTTAATTA+TGG 0.367105 1_4:+70525001 Msa0182100:exon
CTCACCTATCGAACTCAGTC+TGG 0.367617 1_4:-70524567 None:intergenic
TTAGCTTGGGTGGCTTGGTT+GGG 0.372233 1_4:-70522610 None:intergenic
GGCAGTTAGCTTGGGTGGCT+TGG 0.374534 1_4:-70522615 None:intergenic
ACTTCTTCAGTTTCTCAAGC+TGG 0.375617 1_4:-70523403 None:intergenic
CAGAGTAATAACCCTCTTCT+TGG 0.375680 1_4:-70524851 None:intergenic
TTTGCTTCTCTGATGTTGTC+TGG 0.376238 1_4:-70524969 None:intergenic
TCTTTCACTGTTGCCAGAGC+TGG 0.398591 1_4:+70524463 Msa0182100:CDS
CTTCTTCAGTTTCTCAAGCT+GGG 0.407032 1_4:-70523402 None:intergenic
GACGAGCAGCACGCTTTCTT+GGG 0.410830 1_4:-70522151 None:intergenic
AACTGCCTTCTTGGGTTACA+AGG 0.417572 1_4:+70522631 Msa0182100:CDS
CACTTGAATCTCCATGATAT+GGG 0.428524 1_4:-70524209 None:intergenic
CCCAAGCTAACTGCCTTCTT+GGG 0.428836 1_4:+70522623 Msa0182100:CDS
ATTTACAAGCTCGGCAAAGT+TGG 0.433680 1_4:+70524526 Msa0182100:CDS
ACCCAAGAAGGCAGTTAGCT+TGG 0.433816 1_4:-70522624 None:intergenic
ATCCCAAAGAACCGTGTCTT+GGG 0.433824 1_4:-70522124 None:intergenic
ATGAAGGTGTTGTTACTCGT+TGG 0.437276 1_4:+70524359 Msa0182100:CDS
TTAGAACATTGAACACTGTA+TGG 0.438637 1_4:+70523255 Msa0182100:CDS
CATTGGAGTGACCAAGGGTA+AGG 0.441876 1_4:+70524333 Msa0182100:CDS
ATGGTTGTTGTCGGTGTTGT+GGG 0.442307 1_4:+70523209 Msa0182100:CDS
GAAACGACCATGTCCAAACT+TGG 0.447320 1_4:-70524947 None:intergenic
ATCTCAGATCAGGAAAATGA+AGG 0.447874 1_4:+70524168 Msa0182100:intron
CGAACTCAGTCTGGGCGTCA+TGG 0.449202 1_4:-70524558 None:intergenic
GCCTTCTTGGGTTACAAGGC+TGG 0.450941 1_4:+70522635 Msa0182100:CDS
TGAAGGTGTTGTTACTCGTT+GGG 0.451002 1_4:+70524360 Msa0182100:CDS
AGCGTAGGTTCTACAAGAAC+TGG 0.457230 1_4:+70523303 Msa0182100:CDS
ACCCCTCCCATGGTTGTTGT+CGG 0.462754 1_4:+70523200 Msa0182100:CDS
GTCTTCCTCGTAAGACTCAC+AGG 0.464950 1_4:+70524392 Msa0182100:CDS
TGAGAAAGACATTACACCTA+TGG 0.467448 1_4:+70524762 Msa0182100:CDS
GTAAGACTCACAGGGGTTTG+AGG 0.468820 1_4:+70524401 Msa0182100:CDS
CCCAAGAAGGCAGTTAGCTT+GGG 0.469247 1_4:-70522623 None:intergenic
ACTACCATAATTAAGCTTTG+AGG 0.473296 1_4:-70525005 None:intergenic
GATGAAATGATTGACATCAT+TGG 0.474891 1_4:+70524316 Msa0182100:CDS
TTCTGGAACACAGCATCAAT+AGG 0.475795 1_4:-70524292 None:intergenic
CATGGTTGTTGTCGGTGTTG+TGG 0.479589 1_4:+70523208 Msa0182100:CDS
GACTTCTCGTCTTGCTCTTG+AGG 0.480840 1_4:+70524894 Msa0182100:CDS
TGTTCAGCTCAGTTCTGTGA+TGG 0.485951 1_4:-70524498 None:intergenic
AATCCCAAAGAACCGTGTCT+TGG 0.489699 1_4:-70522125 None:intergenic
AACAAGAAAATTTACAAGCT+CGG 0.491496 1_4:+70524517 Msa0182100:CDS
AGAGTAATAACCCTCTTCTT+GGG 0.492275 1_4:-70524850 None:intergenic
GTATGGTACTTACTGGATCC+TGG 0.497646 1_4:-70522689 None:intergenic
TGCAACTGTTATCCGTGTCT+TGG 0.501459 1_4:+70523427 Msa0182100:CDS
GACGAGAAGTCTGCTTAAGA+AGG 0.502167 1_4:-70524882 None:intergenic
ACAGAAGAAAGCCCATATCA+TGG 0.505342 1_4:+70524198 Msa0182100:CDS
GCTGCTCGTCACAGAGGAAA+AGG 0.506457 1_4:+70522164 Msa0182100:CDS
AGGGGTCTCGATGATTGTCA+CGG 0.507650 1_4:-70523183 None:intergenic
GCTTGGTTGGGTCATCCTTG+GGG 0.515078 1_4:-70522598 None:intergenic
GTCAGAGAAGTCGAGAAGCC+AGG 0.515408 1_4:+70522671 Msa0182100:CDS
ACCTTCATAACCCTTACCCT+TGG 0.517932 1_4:-70524344 None:intergenic
GTATCCGTTCTGACCAGCTC+TGG 0.518044 1_4:-70524476 None:intergenic
ATGATCAAGGGAGGCTGTGT+TGG 0.526401 1_4:+70524826 Msa0182100:CDS
CGGTGGTACCATCGCTCAGA+AGG 0.529087 1_4:+70524234 Msa0182100:CDS
GAACTCAGTCTGGGCGTCAT+GGG 0.529915 1_4:-70524557 None:intergenic
ACCAAGGGTAAGGGTTATGA+AGG 0.530593 1_4:+70524343 Msa0182100:CDS
CGAGTTATTAAAATGTCAGA+TGG 0.541412 1_4:-70525095 None:intergenic
GACAACAGCAGCAAAAGCTT+AGG 0.542238 1_4:+70521969 Msa0182100:CDS
TCTCAGATCAGGAAAATGAA+GGG 0.547784 1_4:+70524169 Msa0182100:intron
CACAACACCGACAACAACCA+TGG 0.549447 1_4:-70523207 None:intergenic
GTTCAATGTTCTAAGACCAC+GGG 0.551523 1_4:-70523246 None:intergenic
ACCAGCCTTGTAACCCAAGA+AGG 0.552644 1_4:-70522636 None:intergenic
ACCGACAACAACCATGGGAG+GGG 0.558376 1_4:-70523201 None:intergenic
AAGAAGGCAGTTAGCTTGGG+TGG 0.559172 1_4:-70522620 None:intergenic
AGGTTGCATGTATTGGAGCT+TGG 0.565352 1_4:+70524425 Msa0182100:CDS
TGTTCAATGTTCTAAGACCA+CGG 0.566021 1_4:-70523247 None:intergenic
CTGGTGCAAGTCCAAGAAGA+AGG 0.567366 1_4:+70523322 Msa0182100:CDS
TCTCGACTTCTCTGACAATG+TGG 0.567495 1_4:-70522664 None:intergenic
GACTCACAGGGGTTTGAGGA+AGG 0.568790 1_4:+70524405 Msa0182100:CDS
AGTACATAGTTTAAAACAGA+TGG 0.571470 1_4:-70525068 None:intergenic
AAGTCTGCTTAAGAAGGGAC+TGG 0.577488 1_4:-70524876 None:intergenic
AAGCAGTATGAAAGTGATGA+GGG 0.580782 1_4:+70523362 Msa0182100:CDS
ACCTCTTCCAAGTTTGGACA+TGG 0.582976 1_4:+70524940 Msa0182100:CDS
TCTTCCTCGTAAGACTCACA+GGG 0.584859 1_4:+70524393 Msa0182100:CDS
CACCGACAACAACCATGGGA+GGG 0.590277 1_4:-70523202 None:intergenic
CTCGACTTCTCTGACAATGT+GGG 0.590618 1_4:-70522663 None:intergenic
CCGTGTCTTGGCTCACACCC+AGG 0.590901 1_4:+70523439 Msa0182100:CDS
TCACCTATCGAACTCAGTCT+GGG 0.593125 1_4:-70524566 None:intergenic
ATTGGAGTGACCAAGGGTAA+GGG 0.593223 1_4:+70524334 Msa0182100:CDS
ACGCCCAGACTGAGTTCGAT+AGG 0.595359 1_4:+70524563 Msa0182100:CDS
GAGAAAGACATTACACCTAT+GGG 0.596080 1_4:+70524763 Msa0182100:CDS
GGGGTCTCGATGATTGTCAC+GGG 0.596471 1_4:-70523182 None:intergenic
ACAACACCGACAACAACCAT+GGG 0.596534 1_4:-70523206 None:intergenic
TGACATCATTGGAGTGACCA+AGG 0.598559 1_4:+70524327 Msa0182100:CDS
TGCAGTGAAGGCTTTCCCCA+AGG 0.599253 1_4:+70522583 Msa0182100:intron
ACCATGTCCAAACTTGGAAG+AGG 0.600841 1_4:-70524941 None:intergenic
ATGGGTGGTTTCCCACACTA+CGG 0.607609 1_4:+70524781 Msa0182100:CDS
ACAGTGAAAGAAACTCTAGC+AGG 0.609701 1_4:-70524451 None:intergenic
CTGTGTTGGTCCCAAGAAGA+GGG 0.610053 1_4:+70524840 Msa0182100:CDS
TGGTACCATCGCTCAGAAGG+TGG 0.611098 1_4:+70524237 Msa0182100:CDS
ACGAGAAGTCTGCTTAAGAA+GGG 0.612938 1_4:-70524881 None:intergenic
AAAGCAGTATGAAAGTGATG+AGG 0.613214 1_4:+70523361 Msa0182100:CDS
GCTGTGTTGGTCCCAAGAAG+AGG 0.613945 1_4:+70524839 Msa0182100:CDS
AAGTTCGAGCACCCAAGACA+CGG 0.616675 1_4:+70522113 Msa0182100:CDS
CCTTGACAATACCGTAGTGT+GGG 0.616873 1_4:-70524792 None:intergenic
GTTGCCAGAGCTGGTCAGAA+CGG 0.617265 1_4:+70524472 Msa0182100:CDS
AATCATCGAGACCCCTCCCA+TGG 0.618819 1_4:+70523190 Msa0182100:CDS
CAAGCTCGGCAAAGTTGGAG+AGG 0.619055 1_4:+70524531 Msa0182100:CDS
TGAGTGAGGAAATTAAGCGT+AGG 0.620145 1_4:+70523288 Msa0182100:CDS
CCCACACTACGGTATTGTCA+AGG 0.620478 1_4:+70524792 Msa0182100:CDS
GAAGGTGTTGTTACTCGTTG+GGG 0.623077 1_4:+70524361 Msa0182100:CDS
AAAGTCCACCTTCTGAGCGA+TGG 0.625795 1_4:-70524242 None:intergenic
TAGTGTGGGAAACCACCCAT+AGG 0.626093 1_4:-70524778 None:intergenic
CCTGGGTGTGAGCCAAGACA+CGG 0.628233 1_4:-70523439 None:intergenic
GACATCATTGGAGTGACCAA+GGG 0.628824 1_4:+70524328 Msa0182100:CDS
TATTGATGCTGTGTTCCAGA+AGG 0.629359 1_4:+70524294 Msa0182100:CDS
ACACCGACAACAACCATGGG+AGG 0.629529 1_4:-70523203 None:intergenic
ATCATGGAGATTCAAGTGAA+CGG 0.637492 1_4:+70524214 Msa0182100:CDS
TCCTTGACAATACCGTAGTG+TGG 0.648748 1_4:-70524793 None:intergenic
ACACTTCACTTGCGTAGCAG+CGG 0.649010 1_4:+70521944 Msa0182100:CDS
AAAGACATTACACCTATGGG+TGG 0.665025 1_4:+70524766 Msa0182100:CDS
AAACCCCTGTGAGTCTTACG+AGG 0.675290 1_4:-70524397 None:intergenic
AGGAAAACTAAAATAACCCG+AGG 0.683530 1_4:-70525120 None:intergenic
AAGCGTGCTGCTCGTCACAG+AGG 0.692287 1_4:+70522158 Msa0182100:CDS
ATGGACTCAGCATTTGAGTG+AGG 0.693670 1_4:+70523274 Msa0182100:CDS
AGCAGTATGAAAGTGATGAG+GGG 0.718906 1_4:+70523363 Msa0182100:CDS
ACACTACGGTATTGTCAAGG+AGG 0.722752 1_4:+70524795 Msa0182100:CDS
ATGGAGATTCAAGTGAACGG+TGG 0.740588 1_4:+70524217 Msa0182100:CDS
TTCAATGTTCTAAGACCACG+GGG 0.753117 1_4:-70523245 None:intergenic
CTTCCTCGTAAGACTCACAG+GGG 0.755519 1_4:+70524394 Msa0182100:CDS
GGTTATGTGAAAACTCCCCG+TGG 0.767480 1_4:+70523230 Msa0182100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTCTTAAAAACAT+TGG + chr1_4:70522491-70522510 Msa0182100:intron 10.0%
!!! TTATGATTTTTTTGTTTAAT+TGG + chr1_4:70522522-70522541 Msa0182100:intron 10.0%
!!! AATGATATCATAAATTTTTT+GGG - chr1_4:70522780-70522799 None:intergenic 10.0%
!!! AAATGATATCATAAATTTTT+TGG - chr1_4:70522781-70522800 None:intergenic 10.0%
!!! TATCATTTATTTGATATTTT+TGG + chr1_4:70522793-70522812 Msa0182100:intron 10.0%
!!! TTGGATTTATTTTTTATATT+TGG + chr1_4:70523949-70523968 Msa0182100:intron 10.0%
!!! TGATAATTTTAAATAACTAA+TGG + chr1_4:70524098-70524117 Msa0182100:intron 10.0%
!! TTAACAAAATTTCAATTACA+AGG - chr1_4:70522232-70522251 None:intergenic 15.0%
!! TAAATATGATTAAATAAAGC+AGG - chr1_4:70522425-70522444 None:intergenic 15.0%
!!! AATAAAAAACTTGTTATCAA+GGG - chr1_4:70522464-70522483 None:intergenic 15.0%
!!! AAATAAAAAACTTGTTATCA+AGG - chr1_4:70522465-70522484 None:intergenic 15.0%
!!! TTTATTTTTGAAACAACATA+GGG - chr1_4:70522956-70522975 None:intergenic 15.0%
!!! TTTTATTTTTGAAACAACAT+AGG - chr1_4:70522957-70522976 None:intergenic 15.0%
!! TATGTAACAATTATCATATT+AGG + chr1_4:70524042-70524061 Msa0182100:intron 15.0%
!!! AAATCAAAATTTTAAGAGAA+AGG - chr1_4:70525221-70525240 None:intergenic 15.0%
!! ACAACATAATGATAAGAAAT+GGG - chr1_4:70522203-70522222 None:intergenic 20.0%
!! AACAACATAATGATAAGAAA+TGG - chr1_4:70522204-70522223 None:intergenic 20.0%
!!! TAAAATGACAATCATTTTCT+TGG + chr1_4:70522254-70522273 Msa0182100:intron 20.0%
!! ATTGGATCTAATGATATAAT+TGG + chr1_4:70522281-70522300 Msa0182100:intron 20.0%
!! CTAATATCATAGTTATAATC+AGG - chr1_4:70522308-70522327 None:intergenic 20.0%
!! GTCAAATTACATATTCATAA+GGG - chr1_4:70522403-70522422 None:intergenic 20.0%
!! ATCTAATTTGATGAATGTTT+AGG + chr1_4:70522737-70522756 Msa0182100:intron 20.0%
!!! GTATTTTTACCTCAAATTAT+AGG + chr1_4:70522821-70522840 Msa0182100:intron 20.0%
!!! TTATTTTTGAAACAACATAG+GGG - chr1_4:70522955-70522974 None:intergenic 20.0%
!! TTAAGCATTTCAAAAAATCA+GGG - chr1_4:70523112-70523131 None:intergenic 20.0%
!!! CTAGATTTTTCTTAAAAGTT+AGG - chr1_4:70523711-70523730 None:intergenic 20.0%
!!! TTTATTTTGGATGATGTTTT+TGG + chr1_4:70523750-70523769 Msa0182100:intron 20.0%
!!! ATTTTTTATATTTGGCAGTA+TGG + chr1_4:70523957-70523976 Msa0182100:intron 20.0%
! GAATTGAAAGAATTGAGAAT+GGG - chr1_4:70522003-70522022 None:intergenic 25.0%
! AGAATTGAAAGAATTGAGAA+TGG - chr1_4:70522004-70522023 None:intergenic 25.0%
!! AATCATTTTCTTGGTTAGAT+TGG + chr1_4:70522263-70522282 Msa0182100:intron 25.0%
! GGTCAAATTACATATTCATA+AGG - chr1_4:70522404-70522423 None:intergenic 25.0%
! TAAATGAATCAAAGCTTGAT+GGG - chr1_4:70522714-70522733 None:intergenic 25.0%
! TTCAGTGAAAAACTAAACAA+AGG - chr1_4:70522908-70522927 None:intergenic 25.0%
! TTTGGCTGAAAATGAATATT+GGG - chr1_4:70522998-70523017 None:intergenic 25.0%
! ATTTGGCTGAAAATGAATAT+TGG - chr1_4:70522999-70523018 None:intergenic 25.0%
! ATAAAATGCAAAACCAGATT+TGG - chr1_4:70523016-70523035 None:intergenic 25.0%
!! TAATGTGTTATTGTTGATGT+AGG + chr1_4:70523071-70523090 Msa0182100:intron 25.0%
! TAAGCATTTCAAAAAATCAG+GGG - chr1_4:70523111-70523130 None:intergenic 25.0%
! GTTAAGCATTTCAAAAAATC+AGG - chr1_4:70523113-70523132 None:intergenic 25.0%
! AAAGAAATAGACAGCATATT+TGG - chr1_4:70523471-70523490 None:intergenic 25.0%
!! CTTTTGCTTCTCATTATATT+AGG + chr1_4:70523493-70523512 Msa0182100:intron 25.0%
! AACAAGAAAATTTACAAGCT+CGG + chr1_4:70524517-70524536 Msa0182100:CDS 25.0%
!! AGTACATAGTTTAAAACAGA+TGG - chr1_4:70525071-70525090 None:intergenic 25.0%
! AAAGAACTGCAGTAATAAAT+AGG - chr1_4:70525143-70525162 None:intergenic 25.0%
!! TTCCATTATACTTCCAATTT+TGG + chr1_4:70525186-70525205 Msa0182100:three_prime_UTR 25.0%
! AAGGAATAAAACACCAAAAT+TGG - chr1_4:70525202-70525221 None:intergenic 25.0%
!! TGTGATTTGTTGTTGTTTGA+AGG + chr1_4:70522069-70522088 Msa0182100:intron 30.0%
TATCTGAGTGTAACTTAACT+TGG + chr1_4:70522547-70522566 Msa0182100:intron 30.0%
GTAAATGAATCAAAGCTTGA+TGG - chr1_4:70522715-70522734 None:intergenic 30.0%
AACTTCTCTCCTATAATTTG+AGG - chr1_4:70522833-70522852 None:intergenic 30.0%
!! ACTTTGAAACATGTAATCTC+AGG - chr1_4:70522867-70522886 None:intergenic 30.0%
! TATTCATTTTCAGCCAAATC+TGG + chr1_4:70523000-70523019 Msa0182100:intron 30.0%
TGTGTTCTCTTACATTTACA+TGG + chr1_4:70523044-70523063 Msa0182100:intron 30.0%
TTAGAACATTGAACACTGTA+TGG + chr1_4:70523255-70523274 Msa0182100:CDS 30.0%
TTGCTTCTCATTATATTAGG+AGG + chr1_4:70523496-70523515 Msa0182100:intron 30.0%
AAATAAAGTTCCAGAACTAC+TGG - chr1_4:70523737-70523756 None:intergenic 30.0%
!!! GTAGTTCTGGAACTTTATTT+TGG + chr1_4:70523737-70523756 Msa0182100:intron 30.0%
!! AGTCACAATTTTGATACTAG+TGG + chr1_4:70523780-70523799 Msa0182100:intron 30.0%
!! GTCACAATTTTGATACTAGT+GGG + chr1_4:70523781-70523800 Msa0182100:intron 30.0%
!! ATTTTCCTGATCTGAGATAA+AGG - chr1_4:70524166-70524185 None:intergenic 30.0%
!!! ATACAACTTTTTTGAGAAGC+AGG + chr1_4:70524267-70524286 Msa0182100:CDS 30.0%
GATGAAATGATTGACATCAT+TGG + chr1_4:70524316-70524335 Msa0182100:CDS 30.0%
! TCAGAGAAGCAAAAGTTTTA+TGG + chr1_4:70524979-70524998 Msa0182100:CDS 30.0%
ACTACCATAATTAAGCTTTG+AGG - chr1_4:70525008-70525027 None:intergenic 30.0%
!!! TGGTAGTAGTTTTGAAATGT+TGG + chr1_4:70525021-70525040 Msa0182100:three_prime_UTR 30.0%
!!! GGTAGTAGTTTTGAAATGTT+GGG + chr1_4:70525022-70525041 Msa0182100:three_prime_UTR 30.0%
CGAGTTATTAAAATGTCAGA+TGG - chr1_4:70525098-70525117 None:intergenic 30.0%
!! CATTTTAATAACTCGATCCT+CGG + chr1_4:70525103-70525122 Msa0182100:three_prime_UTR 30.0%
!! ATTTTAATAACTCGATCCTC+GGG + chr1_4:70525104-70525123 Msa0182100:three_prime_UTR 30.0%
! CACCAAAATTGGAAGTATAA+TGG - chr1_4:70525191-70525210 None:intergenic 30.0%
!! GATTTGTTGTTGTTTGAAGG+AGG + chr1_4:70522072-70522091 Msa0182100:intron 35.0%
! TGAGTGTAACTTAACTTGGT+TGG + chr1_4:70522551-70522570 Msa0182100:intron 35.0%
!! TGTGAAGCTCTGAGATAATA+GGG - chr1_4:70523145-70523164 None:intergenic 35.0%
!! TTGTGAAGCTCTGAGATAAT+AGG - chr1_4:70523146-70523165 None:intergenic 35.0%
TATCTCAGAGCTTCACAAAA+AGG + chr1_4:70523148-70523167 Msa0182100:intron 35.0%
!! TGTTCAATGTTCTAAGACCA+CGG - chr1_4:70523250-70523269 None:intergenic 35.0%
AAAGCAGTATGAAAGTGATG+AGG + chr1_4:70523361-70523380 Msa0182100:CDS 35.0%
AAGCAGTATGAAAGTGATGA+GGG + chr1_4:70523362-70523381 Msa0182100:CDS 35.0%
ACGAGATTTCTGACTCTTAT+TGG + chr1_4:70523930-70523949 Msa0182100:intron 35.0%
GTTTACCTTTATCTCAGATC+AGG + chr1_4:70524158-70524177 Msa0182100:intron 35.0%
ATCTCAGATCAGGAAAATGA+AGG + chr1_4:70524168-70524187 Msa0182100:intron 35.0%
TCTCAGATCAGGAAAATGAA+GGG + chr1_4:70524169-70524188 Msa0182100:intron 35.0%
CACTTGAATCTCCATGATAT+GGG - chr1_4:70524212-70524231 None:intergenic 35.0%
TCACTTGAATCTCCATGATA+TGG - chr1_4:70524213-70524232 None:intergenic 35.0%
ATCATGGAGATTCAAGTGAA+CGG + chr1_4:70524214-70524233 Msa0182100:CDS 35.0%
TGTCAATCATTTCATCCTTC+TGG - chr1_4:70524312-70524331 None:intergenic 35.0%
AACATGCTCTGATTGTTCAT+TGG + chr1_4:70524591-70524610 Msa0182100:intron 35.0%
ACTGCAACAGATTTCAGTTT+AGG + chr1_4:70524669-70524688 Msa0182100:intron 35.0%
TGAGAAAGACATTACACCTA+TGG + chr1_4:70524762-70524781 Msa0182100:CDS 35.0%
GAGAAAGACATTACACCTAT+GGG + chr1_4:70524763-70524782 Msa0182100:CDS 35.0%
! GAGGATTTTCTGATGATCAA+GGG + chr1_4:70524814-70524833 Msa0182100:CDS 35.0%
AGAGTAATAACCCTCTTCTT+GGG - chr1_4:70524853-70524872 None:intergenic 35.0%
AGGAAAACTAAAATAACCCG+AGG - chr1_4:70525123-70525142 None:intergenic 35.0%
TCAACAGCATTCAAGTGTTC+AGG - chr1_4:70522346-70522365 None:intergenic 40.0%
! TTGATGGGTATGGTACTTAC+TGG - chr1_4:70522699-70522718 None:intergenic 40.0%
! GAATCAAAGCTTGATGGGTA+TGG - chr1_4:70522709-70522728 None:intergenic 40.0%
!! TTCAATGTTCTAAGACCACG+GGG - chr1_4:70523248-70523267 None:intergenic 40.0%
!! GTTCAATGTTCTAAGACCAC+GGG - chr1_4:70523249-70523268 None:intergenic 40.0%
TGAGTGAGGAAATTAAGCGT+AGG + chr1_4:70523288-70523307 Msa0182100:CDS 40.0%
AGCAGTATGAAAGTGATGAG+GGG + chr1_4:70523363-70523382 Msa0182100:CDS 40.0%
CTTCTTCAGTTTCTCAAGCT+GGG - chr1_4:70523405-70523424 None:intergenic 40.0%
ACTTCTTCAGTTTCTCAAGC+TGG - chr1_4:70523406-70523425 None:intergenic 40.0%
AGCATATTTGGCAGTTACCT+GGG - chr1_4:70523459-70523478 None:intergenic 40.0%
ACTAGATCAGAAATCTCGTG+TGG - chr1_4:70523668-70523687 None:intergenic 40.0%
AATCTAGTCACCAGTAGTTC+TGG + chr1_4:70523724-70523743 Msa0182100:intron 40.0%
TAAGAGTCAGAAATCTCGTG+TGG - chr1_4:70523929-70523948 None:intergenic 40.0%
TCAATGACTCTCGACTCATA+TGG + chr1_4:70523980-70523999 Msa0182100:intron 40.0%
ACAGAAGAAAGCCCATATCA+TGG + chr1_4:70524198-70524217 Msa0182100:CDS 40.0%
!! TTCTGGAACACAGCATCAAT+AGG - chr1_4:70524295-70524314 None:intergenic 40.0%
TATTGATGCTGTGTTCCAGA+AGG + chr1_4:70524294-70524313 Msa0182100:CDS 40.0%
!! ATGAAGGTGTTGTTACTCGT+TGG + chr1_4:70524359-70524378 Msa0182100:CDS 40.0%
!! TGAAGGTGTTGTTACTCGTT+GGG + chr1_4:70524360-70524379 Msa0182100:CDS 40.0%
TTGAGGAAGGTTGCATGTAT+TGG + chr1_4:70524418-70524437 Msa0182100:CDS 40.0%
ACAGTGAAAGAAACTCTAGC+AGG - chr1_4:70524454-70524473 None:intergenic 40.0%
ATTTACAAGCTCGGCAAAGT+TGG + chr1_4:70524526-70524545 Msa0182100:CDS 40.0%
CCAAAAAGGCTGGATAAGTT+TGG - chr1_4:70524732-70524751 None:intergenic 40.0%
! CCAAACTTATCCAGCCTTTT+TGG + chr1_4:70524729-70524748 Msa0182100:intron 40.0%
!!! ATCCAGCCTTTTTGGTTAAC+AGG + chr1_4:70524737-70524756 Msa0182100:intron 40.0%
CTCAGTCCTGTTAACCAAAA+AGG - chr1_4:70524746-70524765 None:intergenic 40.0%
AAAGACATTACACCTATGGG+TGG + chr1_4:70524766-70524785 Msa0182100:CDS 40.0%
! GGAGGATTTTCTGATGATCA+AGG + chr1_4:70524813-70524832 Msa0182100:CDS 40.0%
! GATTTTCTGATGATCAAGGG+AGG + chr1_4:70524817-70524836 Msa0182100:CDS 40.0%
CAGAGTAATAACCCTCTTCT+TGG - chr1_4:70524854-70524873 None:intergenic 40.0%
ACGAGAAGTCTGCTTAAGAA+GGG - chr1_4:70524884-70524903 None:intergenic 40.0%
ATCGATACCTCTTCCAAGTT+TGG + chr1_4:70524934-70524953 Msa0182100:CDS 40.0%
TTTGCTTCTCTGATGTTGTC+TGG - chr1_4:70524972-70524991 None:intergenic 40.0%
GACGCCTCAAAGCTTAATTA+TGG + chr1_4:70525001-70525020 Msa0182100:exon 40.0%
GACAACAGCAGCAAAAGCTT+AGG + chr1_4:70521969-70521988 Msa0182100:CDS 45.0%
ATCCCAAAGAACCGTGTCTT+GGG - chr1_4:70522127-70522146 None:intergenic 45.0%
AATCCCAAAGAACCGTGTCT+TGG - chr1_4:70522128-70522147 None:intergenic 45.0%
AACTGCCTTCTTGGGTTACA+AGG + chr1_4:70522631-70522650 Msa0182100:CDS 45.0%
CTCGACTTCTCTGACAATGT+GGG - chr1_4:70522666-70522685 None:intergenic 45.0%
TCTCGACTTCTCTGACAATG+TGG - chr1_4:70522667-70522686 None:intergenic 45.0%
GTATGGTACTTACTGGATCC+TGG - chr1_4:70522692-70522711 None:intergenic 45.0%
ACAACACCGACAACAACCAT+GGG - chr1_4:70523209-70523228 None:intergenic 45.0%
!! ATGGTTGTTGTCGGTGTTGT+GGG + chr1_4:70523209-70523228 Msa0182100:CDS 45.0%
ATGGACTCAGCATTTGAGTG+AGG + chr1_4:70523274-70523293 Msa0182100:CDS 45.0%
AGCGTAGGTTCTACAAGAAC+TGG + chr1_4:70523303-70523322 Msa0182100:CDS 45.0%
CTTGCTGAAAGCCTTCTTCT+TGG - chr1_4:70523336-70523355 None:intergenic 45.0%
TGCAACTGTTATCCGTGTCT+TGG + chr1_4:70523427-70523446 Msa0182100:CDS 45.0%
CAGCATATTTGGCAGTTACC+TGG - chr1_4:70523460-70523479 None:intergenic 45.0%
! CGCTAATTAGGTGCTATGAG+CGG + chr1_4:70523898-70523917 Msa0182100:intron 45.0%
ATGGAGATTCAAGTGAACGG+TGG + chr1_4:70524217-70524236 Msa0182100:CDS 45.0%
TGACATCATTGGAGTGACCA+AGG + chr1_4:70524327-70524346 Msa0182100:CDS 45.0%
GACATCATTGGAGTGACCAA+GGG + chr1_4:70524328-70524347 Msa0182100:CDS 45.0%
ATTGGAGTGACCAAGGGTAA+GGG + chr1_4:70524334-70524353 Msa0182100:CDS 45.0%
ACCAAGGGTAAGGGTTATGA+AGG + chr1_4:70524343-70524362 Msa0182100:CDS 45.0%
ACCTTCATAACCCTTACCCT+TGG - chr1_4:70524347-70524366 None:intergenic 45.0%
!! GAAGGTGTTGTTACTCGTTG+GGG + chr1_4:70524361-70524380 Msa0182100:CDS 45.0%
TCTTCCTCGTAAGACTCACA+GGG + chr1_4:70524393-70524412 Msa0182100:CDS 45.0%
AGGTTGCATGTATTGGAGCT+TGG + chr1_4:70524425-70524444 Msa0182100:CDS 45.0%
TGTTCAGCTCAGTTCTGTGA+TGG - chr1_4:70524501-70524520 None:intergenic 45.0%
TCACCTATCGAACTCAGTCT+GGG - chr1_4:70524569-70524588 None:intergenic 45.0%
GTCCTGTTAACCAAAAAGGC+TGG - chr1_4:70524742-70524761 None:intergenic 45.0%
CCTTGACAATACCGTAGTGT+GGG - chr1_4:70524795-70524814 None:intergenic 45.0%
TCCTTGACAATACCGTAGTG+TGG - chr1_4:70524796-70524815 None:intergenic 45.0%
ACACTACGGTATTGTCAAGG+AGG + chr1_4:70524795-70524814 Msa0182100:CDS 45.0%
AAGTCTGCTTAAGAAGGGAC+TGG - chr1_4:70524879-70524898 None:intergenic 45.0%
GACGAGAAGTCTGCTTAAGA+AGG - chr1_4:70524885-70524904 None:intergenic 45.0%
ACCTCTTCCAAGTTTGGACA+TGG + chr1_4:70524940-70524959 Msa0182100:CDS 45.0%
ACCATGTCCAAACTTGGAAG+AGG - chr1_4:70524944-70524963 None:intergenic 45.0%
GAAACGACCATGTCCAAACT+TGG - chr1_4:70524950-70524969 None:intergenic 45.0%
ACACTTCACTTGCGTAGCAG+CGG + chr1_4:70521944-70521963 Msa0182100:CDS 50.0%
AAGTTCGAGCACCCAAGACA+CGG + chr1_4:70522113-70522132 Msa0182100:CDS 50.0%
CACCCAAGACACGGTTCTTT+GGG + chr1_4:70522122-70522141 Msa0182100:CDS 50.0%
TGGTGTGACTACTGCAGTGA+AGG + chr1_4:70522571-70522590 Msa0182100:intron 50.0%
!! TTAGCTTGGGTGGCTTGGTT+GGG - chr1_4:70522613-70522632 None:intergenic 50.0%
! AAGAAGGCAGTTAGCTTGGG+TGG - chr1_4:70522623-70522642 None:intergenic 50.0%
ACCCAAGCTAACTGCCTTCT+TGG + chr1_4:70522622-70522641 Msa0182100:CDS 50.0%
! CCCAAGAAGGCAGTTAGCTT+GGG - chr1_4:70522626-70522645 None:intergenic 50.0%
CCCAAGCTAACTGCCTTCTT+GGG + chr1_4:70522623-70522642 Msa0182100:CDS 50.0%
ACCCAAGAAGGCAGTTAGCT+TGG - chr1_4:70522627-70522646 None:intergenic 50.0%
! ACCAGCCTTGTAACCCAAGA+AGG - chr1_4:70522639-70522658 None:intergenic 50.0%
AGGGGTCTCGATGATTGTCA+CGG - chr1_4:70523186-70523205 None:intergenic 50.0%
CACAACACCGACAACAACCA+TGG - chr1_4:70523210-70523229 None:intergenic 50.0%
!! CATGGTTGTTGTCGGTGTTG+TGG + chr1_4:70523208-70523227 Msa0182100:CDS 50.0%
GGTTATGTGAAAACTCCCCG+TGG + chr1_4:70523230-70523249 Msa0182100:CDS 50.0%
CTGGTGCAAGTCCAAGAAGA+AGG + chr1_4:70523322-70523341 Msa0182100:CDS 50.0%
TCAGTTTCTCAAGCTGGGTC+TGG - chr1_4:70523400-70523419 None:intergenic 50.0%
TCTGTGCAAACGCAGCACTT+AGG + chr1_4:70523624-70523643 Msa0182100:intron 50.0%
! CAGCACTTAGGTGCTATGAG+CGG + chr1_4:70523636-70523655 Msa0182100:intron 50.0%
GTGCAAACGCAGCGCTAATT+AGG + chr1_4:70523886-70523905 Msa0182100:intron 50.0%
AAAGTCCACCTTCTGAGCGA+TGG - chr1_4:70524245-70524264 None:intergenic 50.0%
CATTGGAGTGACCAAGGGTA+AGG + chr1_4:70524333-70524352 Msa0182100:CDS 50.0%
GTCTTCCTCGTAAGACTCAC+AGG + chr1_4:70524392-70524411 Msa0182100:CDS 50.0%
CTTCCTCGTAAGACTCACAG+GGG + chr1_4:70524394-70524413 Msa0182100:CDS 50.0%
AAACCCCTGTGAGTCTTACG+AGG - chr1_4:70524400-70524419 None:intergenic 50.0%
GTAAGACTCACAGGGGTTTG+AGG + chr1_4:70524401-70524420 Msa0182100:CDS 50.0%
TCTTTCACTGTTGCCAGAGC+TGG + chr1_4:70524463-70524482 Msa0182100:CDS 50.0%
CTCACCTATCGAACTCAGTC+TGG - chr1_4:70524570-70524589 None:intergenic 50.0%
TAGTGTGGGAAACCACCCAT+AGG - chr1_4:70524781-70524800 None:intergenic 50.0%
ATGGGTGGTTTCCCACACTA+CGG + chr1_4:70524781-70524800 Msa0182100:CDS 50.0%
CCCACACTACGGTATTGTCA+AGG + chr1_4:70524792-70524811 Msa0182100:CDS 50.0%
ATGATCAAGGGAGGCTGTGT+TGG + chr1_4:70524826-70524845 Msa0182100:CDS 50.0%
! CTGTGTTGGTCCCAAGAAGA+GGG + chr1_4:70524840-70524859 Msa0182100:CDS 50.0%
GACTTCTCGTCTTGCTCTTG+AGG + chr1_4:70524894-70524913 Msa0182100:CDS 50.0%
GCACCCAAGACACGGTTCTT+TGG + chr1_4:70522121-70522140 Msa0182100:CDS 55.0%
GACGAGCAGCACGCTTTCTT+GGG - chr1_4:70522154-70522173 None:intergenic 55.0%
TGACGAGCAGCACGCTTTCT+TGG - chr1_4:70522155-70522174 None:intergenic 55.0%
GCTGCTCGTCACAGAGGAAA+AGG + chr1_4:70522164-70522183 Msa0182100:CDS 55.0%
TGCAGTGAAGGCTTTCCCCA+AGG + chr1_4:70522583-70522602 Msa0182100:intron 55.0%
GCTTGGTTGGGTCATCCTTG+GGG - chr1_4:70522601-70522620 None:intergenic 55.0%
! GGCTTGGTTGGGTCATCCTT+GGG - chr1_4:70522602-70522621 None:intergenic 55.0%
!! TGGCTTGGTTGGGTCATCCT+TGG - chr1_4:70522603-70522622 None:intergenic 55.0%
!! GTTAGCTTGGGTGGCTTGGT+TGG - chr1_4:70522614-70522633 None:intergenic 55.0%
GCCTTCTTGGGTTACAAGGC+TGG + chr1_4:70522635-70522654 Msa0182100:CDS 55.0%
GTCAGAGAAGTCGAGAAGCC+AGG + chr1_4:70522671-70522690 Msa0182100:CDS 55.0%
GGGGTCTCGATGATTGTCAC+GGG - chr1_4:70523185-70523204 None:intergenic 55.0%
AATCATCGAGACCCCTCCCA+TGG + chr1_4:70523190-70523209 Msa0182100:CDS 55.0%
ACCCCTCCCATGGTTGTTGT+CGG + chr1_4:70523200-70523219 Msa0182100:CDS 55.0%
ACCGACAACAACCATGGGAG+GGG - chr1_4:70523204-70523223 None:intergenic 55.0%
CACCGACAACAACCATGGGA+GGG - chr1_4:70523205-70523224 None:intergenic 55.0%
ACACCGACAACAACCATGGG+AGG - chr1_4:70523206-70523225 None:intergenic 55.0%
TGGTACCATCGCTCAGAAGG+TGG + chr1_4:70524237-70524256 Msa0182100:CDS 55.0%
GACTCACAGGGGTTTGAGGA+AGG + chr1_4:70524405-70524424 Msa0182100:CDS 55.0%
GTTGCCAGAGCTGGTCAGAA+CGG + chr1_4:70524472-70524491 Msa0182100:CDS 55.0%
GTATCCGTTCTGACCAGCTC+TGG - chr1_4:70524479-70524498 None:intergenic 55.0%
CAAGCTCGGCAAAGTTGGAG+AGG + chr1_4:70524531-70524550 Msa0182100:CDS 55.0%
GAACTCAGTCTGGGCGTCAT+GGG - chr1_4:70524560-70524579 None:intergenic 55.0%
ACGCCCAGACTGAGTTCGAT+AGG + chr1_4:70524563-70524582 Msa0182100:CDS 55.0%
! GCTGTGTTGGTCCCAAGAAG+AGG + chr1_4:70524839-70524858 Msa0182100:CDS 55.0%
! AAGCGTGCTGCTCGTCACAG+AGG + chr1_4:70522158-70522177 Msa0182100:CDS 60.0%
! GGCAGTTAGCTTGGGTGGCT+TGG - chr1_4:70522618-70522637 None:intergenic 60.0%
CCTGGGTGTGAGCCAAGACA+CGG - chr1_4:70523442-70523461 None:intergenic 60.0%
CGGTGGTACCATCGCTCAGA+AGG + chr1_4:70524234-70524253 Msa0182100:CDS 60.0%
CGAACTCAGTCTGGGCGTCA+TGG - chr1_4:70524561-70524580 None:intergenic 60.0%
CCGTGTCTTGGCTCACACCC+AGG + chr1_4:70523439-70523458 Msa0182100:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 70521935 70525267 70521935 ID=Msa0182100;Name=Msa0182100
chr1_4 mRNA 70521935 70525267 70521935 ID=Msa0182100-mRNA-1;Parent=Msa0182100;Name=Msa0182100-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|1|0.83|1|1|1|6|250|411
chr1_4 exon 70521935 70521990 70521935 ID=Msa0182100-mRNA-1:exon:23526;Parent=Msa0182100-mRNA-1
chr1_4 exon 70522091 70522185 70522091 ID=Msa0182100-mRNA-1:exon:23527;Parent=Msa0182100-mRNA-1
chr1_4 exon 70522588 70522698 70522588 ID=Msa0182100-mRNA-1:exon:23528;Parent=Msa0182100-mRNA-1
chr1_4 exon 70523156 70523460 70523156 ID=Msa0182100-mRNA-1:exon:23529;Parent=Msa0182100-mRNA-1
chr1_4 exon 70524175 70524584 70524175 ID=Msa0182100-mRNA-1:exon:23530;Parent=Msa0182100-mRNA-1
chr1_4 exon 70524759 70525267 70524759 ID=Msa0182100-mRNA-1:exon:23531;Parent=Msa0182100-mRNA-1
chr1_4 CDS 70521935 70521990 70521935 ID=Msa0182100-mRNA-1:cds;Parent=Msa0182100-mRNA-1
chr1_4 CDS 70522091 70522185 70522091 ID=Msa0182100-mRNA-1:cds;Parent=Msa0182100-mRNA-1
chr1_4 CDS 70522588 70522698 70522588 ID=Msa0182100-mRNA-1:cds;Parent=Msa0182100-mRNA-1
chr1_4 CDS 70523156 70523460 70523156 ID=Msa0182100-mRNA-1:cds;Parent=Msa0182100-mRNA-1
chr1_4 CDS 70524175 70524584 70524175 ID=Msa0182100-mRNA-1:cds;Parent=Msa0182100-mRNA-1
chr1_4 CDS 70524759 70525017 70524759 ID=Msa0182100-mRNA-1:cds;Parent=Msa0182100-mRNA-1
chr1_4 three_prime_UTR 70525018 70525267 70525018 ID=Msa0182100-mRNA-1:three_prime_utr;Parent=Msa0182100-mRNA-1
Gene Sequence

>Msa0182100

GGTCTGTGTACACTTCACTTGCGTAGCAGCGGCAGACAACAGCAGCAAAAGCTTAGGAGGAAAAAGATGTCTCACAGAAAGTTCGAGCACCCAAGACACGGTTCTTTGGGATTTCTCCCAAGAAAGCGTGCTGCTCGTCACAGAGGAAAAGTGAAGGCTTTCCCCAAGGATGACCCAACCAAGCCACCCAAGCTAACTGCCTTCTTGGGTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTCGAGAAGCCAGGATCCAAGCTTCACAAAAAGGAGACTTGTGAGCCCGTGACAATCATCGAGACCCCTCCCATGGTTGTTGTCGGTGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTAGAACATTGAACACTGTATGGACTCAGCATTTGAGTGAGGAAATTAAGCGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCAGCAAGTACTCAAAGCAGTATGAAAGTGATGAGGGGAAGAAAAACATCCAGACCCAGCTTGAGAAACTGAAGAAGTATGCAACTGTTATCCGTGTCTTGGCTCACACCCAGATCAGGAAAATGAAGGGTTTGAAACAGAAGAAAGCCCATATCATGGAGATTCAAGTGAACGGTGGTACCATCGCTCAGAAGGTGGACTTTGCATACAACTTTTTTGAGAAGCAGGTTCCTATTGATGCTGTGTTCCAGAAGGATGAAATGATTGACATCATTGGAGTGACCAAGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACTCGTCTTCCTCGTAAGACTCACAGGGGTTTGAGGAAGGTTGCATGTATTGGAGCTTGGCATCCTGCTAGAGTTTCTTTCACTGTTGCCAGAGCTGGTCAGAACGGATACCATCACAGAACTGAGCTGAACAAGAAAATTTACAAGCTCGGCAAAGTTGGAGAGGAGACCCATGACGCCCAGACTGAGTTCGATAGGACTGAGAAAGACATTACACCTATGGGTGGTTTCCCACACTACGGTATTGTCAAGGAGGATTTTCTGATGATCAAGGGAGGCTGTGTTGGTCCCAAGAAGAGGGTTATTACTCTGCGCCAGTCCCTTCTTAAGCAGACTTCTCGTCTTGCTCTTGAGGATATCAAACTCAAGTTTATCGATACCTCTTCCAAGTTTGGACATGGTCGTTTCCAGACAACATCAGAGAAGCAAAAGTTTTATGGACGCCTCAAAGCTTAA

Protein sequence

>Msa0182100

GLCTLHLRSSGRQQQQKLRRKKMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKVGEETHDAQTEFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKRVITLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTSEKQKFYGRLKA*