AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1115900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1115900 MtrunA17_Chr7g0258211 94.380 516 26 2 1 516 1 513 0.0 963
Msa1115900 MtrunA17_Chr8g0351801 47.401 481 237 5 50 516 44 522 2.85e-153 447
Msa1115900 MtrunA17_Chr1g0174461 40.467 514 287 5 11 516 6 508 8.48e-142 418
Msa1115900 MtrunA17_Chr7g0258221 43.714 517 265 10 11 516 7 508 6.24e-141 416
Msa1115900 MtrunA17_Chr1g0174451 38.716 514 291 6 12 516 11 509 7.93e-139 410
Msa1115900 MtrunA17_Chr3g0084921 40.840 524 279 7 6 516 9 514 9.73e-139 410
Msa1115900 MtrunA17_Chr1g0174471 41.634 514 277 7 11 514 22 522 8.39e-138 408
Msa1115900 MtrunA17_Chr1g0174481 39.130 506 287 6 13 513 11 500 8.35e-134 397
Msa1115900 MtrunA17_Chr7g0235551 41.770 486 266 6 40 516 34 511 4.24e-131 390
Msa1115900 MtrunA17_Chr1g0174441 39.306 519 289 9 11 516 25 530 3.40e-130 389
Msa1115900 MtrunA17_Chr8g0362701 41.949 472 255 5 51 514 46 506 8.69e-130 387
Msa1115900 MtrunA17_Chr8g0362481 41.834 447 243 5 75 514 1 437 1.98e-123 369
Msa1115900 MtrunA17_Chr1g0207841 38.066 486 270 4 51 516 49 523 7.28e-118 357
Msa1115900 MtrunA17_Chr4g0030701 37.352 506 287 5 29 514 24 519 9.57e-118 357
Msa1115900 MtrunA17_Chr4g0030711 36.777 484 279 4 51 515 48 523 2.73e-114 348
Msa1115900 MtrunA17_Chr7g0224561 35.687 524 296 8 9 513 8 509 2.67e-108 332
Msa1115900 MtrunA17_Chr7g0224551 35.509 521 295 8 9 510 8 506 4.57e-108 332
Msa1115900 MtrunA17_Chr3g0086691 37.205 508 293 9 14 509 10 503 3.49e-107 329
Msa1115900 MtrunA17_Chr3g0086661 37.791 516 301 7 9 515 5 509 1.10e-106 328
Msa1115900 MtrunA17_Chr3g0086651 37.791 516 301 7 9 515 5 509 1.40e-106 328
Msa1115900 MtrunA17_Chr4g0058231 35.573 506 292 7 15 507 9 493 2.64e-106 327
Msa1115900 MtrunA17_Chr8g0344151 36.402 478 282 8 37 505 33 497 5.53e-106 326
Msa1115900 MtrunA17_Chr8g0390881 34.241 514 305 8 9 509 8 501 2.43e-105 324
Msa1115900 MtrunA17_Chr2g0310381 35.158 475 291 6 41 510 29 491 5.70e-105 323
Msa1115900 MtrunA17_Chr2g0310391 33.661 508 314 7 8 510 2 491 1.65e-104 322
Msa1115900 MtrunA17_Chr8g0344181 36.611 478 281 7 37 505 35 499 1.05e-103 320
Msa1115900 MtrunA17_Chr4g0058191 36.832 505 285 11 12 507 4 483 7.11e-103 317
Msa1115900 MtrunA17_Chr4g0061381 35.774 478 285 8 49 515 40 506 1.53e-102 317
Msa1115900 MtrunA17_Chr8g0382901 35.830 494 294 6 20 509 477 951 1.97e-102 328
Msa1115900 MtrunA17_Chr8g0382901 36.095 507 285 8 8 510 2 473 9.51e-102 327
Msa1115900 MtrunA17_Chr3g0116681 35.430 477 286 7 10 483 14 471 3.50e-102 316
Msa1115900 MtrunA17_Chr3g0116741 36.329 523 294 11 6 516 24 519 6.26e-102 316
Msa1115900 MtrunA17_Chr5g0430131 34.160 524 316 8 1 514 1 505 8.24e-102 315
Msa1115900 MtrunA17_Chr6g0484811 35.317 521 301 11 2 509 5 502 1.22e-101 315
Msa1115900 MtrunA17_Chr4g0076161 35.630 508 292 15 9 503 7 492 1.93e-101 314
Msa1115900 MtrunA17_Chr1g0156101 36.152 473 273 8 29 486 24 482 2.98e-101 314
Msa1115900 MtrunA17_Chr4g0058281 35.465 516 295 11 13 511 19 513 3.09e-101 314
Msa1115900 MtrunA17_Chr4g0047631 36.791 511 288 10 8 507 21 507 3.95e-101 313
Msa1115900 MtrunA17_Chr6g0484841 35.124 484 287 7 39 511 36 503 1.14e-100 312
Msa1115900 MtrunA17_Chr5g0431641 35.363 509 300 9 11 511 12 499 2.03e-100 311
Msa1115900 MtrunA17_Chr5g0403331 35.729 487 280 8 38 509 33 501 3.11e-100 311
Msa1115900 MtrunA17_Chr6g0463791 35.000 500 301 10 10 503 7 488 3.21e-100 311
Msa1115900 MtrunA17_Chr4g0058201 35.729 487 290 7 29 507 17 488 3.71e-100 310
Msa1115900 MtrunA17_Chr3g0101571 33.658 514 310 9 9 511 5 498 5.29e-100 310
Msa1115900 MtrunA17_Chr3g0101581 34.113 513 302 11 1 502 1 488 6.38e-100 310
Msa1115900 MtrunA17_Chr5g0430081 34.630 514 302 9 8 509 8 499 7.07e-100 310
Msa1115900 MtrunA17_Chr5g0403351 32.755 519 313 11 6 509 3 500 8.83e-100 310
Msa1115900 MtrunA17_Chr3g0101731 34.902 510 300 11 11 509 10 498 1.15e-99 310
Msa1115900 MtrunA17_Chr5g0430031 36.157 484 273 11 16 483 9 472 1.69e-99 309
Msa1115900 MtrunA17_Chr4g0046331 33.526 519 309 11 17 511 7 513 1.49e-98 307
Msa1115900 MtrunA17_Chr5g0445441 34.774 509 303 11 11 511 53 540 2.62e-97 305
Msa1115900 MtrunA17_Chr3g0101721 36.364 495 279 13 13 493 12 484 3.41e-97 303
Msa1115900 MtrunA17_Chr4g0046351 34.216 491 289 10 40 511 36 511 3.68e-97 303
Msa1115900 MtrunA17_Chr3g0101811 34.906 530 295 13 11 510 10 519 4.60e-97 303
Msa1115900 MtrunA17_Chr4g0047641 35.283 513 300 12 8 507 18 511 1.34e-96 302
Msa1115900 MtrunA17_Chr5g0403321 34.400 500 274 11 38 510 32 504 1.57e-96 301
Msa1115900 MtrunA17_Chr3g0101631 35.317 504 287 13 13 503 8 485 1.58e-96 301
Msa1115900 MtrunA17_Chr3g0101691 35.728 515 294 15 4 503 2 494 2.75e-96 301
Msa1115900 MtrunA17_Chr4g0046321 33.809 491 291 10 40 511 36 511 5.34e-96 300
Msa1115900 MtrunA17_Chr3g0101601 36.436 505 281 13 13 503 8 486 6.32e-96 300
Msa1115900 MtrunA17_Chr4g0047661 34.893 513 301 11 8 507 20 512 6.50e-96 300
Msa1115900 MtrunA17_Chr8g0344191 34.132 501 307 9 14 505 45 531 1.52e-95 300
Msa1115900 MtrunA17_Chr5g0445451 34.247 511 307 10 9 511 10 499 2.16e-95 298
Msa1115900 MtrunA17_Chr5g0430101 33.141 519 316 10 1 509 1 498 8.96e-95 297
Msa1115900 MtrunA17_Chr5g0445461 33.781 521 292 12 11 511 12 499 9.78e-95 296
Msa1115900 MtrunA17_Chr6g0472311 34.698 513 304 10 5 502 7 503 1.02e-94 297
Msa1115900 MtrunA17_Chr3g0101701 34.990 523 305 13 4 511 2 504 1.56e-94 296
Msa1115900 MtrunA17_Chr5g0445421 34.834 511 283 12 9 511 84 552 2.67e-94 297
Msa1115900 MtrunA17_Chr3g0094231 33.476 466 299 5 41 505 37 492 4.45e-94 295
Msa1115900 MtrunA17_Chr5g0431671 33.881 487 295 9 34 511 32 500 4.50e-94 295
Msa1115900 MtrunA17_Chr3g0101621 36.000 500 283 12 15 503 7 480 7.83e-94 294
Msa1115900 MtrunA17_Chr3g0094171 33.066 499 307 7 12 503 18 496 1.01e-93 294
Msa1115900 MtrunA17_Chr1g0156081 34.211 494 296 8 8 486 27 506 1.85e-93 294
Msa1115900 MtrunA17_Chr3g0101711 33.333 522 314 13 4 511 2 503 5.22e-93 292
Msa1115900 MtrunA17_Chr3g0101661 34.698 513 301 14 4 503 2 493 1.14e-92 292
Msa1115900 MtrunA17_Chr4g0011981 36.865 453 264 7 41 486 30 467 2.04e-92 290
Msa1115900 MtrunA17_Chr5g0430091 32.885 520 319 9 1 509 1 501 2.04e-92 291
Msa1115900 MtrunA17_Chr5g0401681 35.542 498 288 11 14 500 3 478 2.40e-92 290
Msa1115900 MtrunA17_Chr3g0101611 34.292 487 289 8 36 510 34 501 3.23e-92 290
Msa1115900 MtrunA17_Chr4g0047691 34.893 513 299 14 8 507 20 510 1.14e-91 289
Msa1115900 MtrunA17_Chr4g0058261 33.884 484 291 8 42 511 64 532 1.26e-91 290
Msa1115900 MtrunA17_Chr1g0162811 32.806 506 313 9 6 503 3 489 1.78e-91 288
Msa1115900 MtrunA17_Chr3g0101751 36.327 490 279 10 11 490 17 483 2.30e-91 288
Msa1115900 MtrunA17_Chr8g0361471 33.667 499 295 13 1 488 1 474 3.24e-91 288
Msa1115900 MtrunA17_Chr4g0011961 34.200 500 303 9 15 505 6 488 3.36e-91 287
Msa1115900 MtrunA17_Chr5g0445531 33.613 476 291 8 41 509 39 496 3.63e-91 287
Msa1115900 MtrunA17_Chr3g0101821 34.942 518 302 12 11 516 10 504 3.97e-91 287
Msa1115900 MtrunA17_Chr3g0101801 33.719 519 307 11 11 516 17 511 6.71e-91 287
Msa1115900 MtrunA17_Chr5g0445381 34.180 512 307 11 9 510 38 529 9.96e-91 287
Msa1115900 MtrunA17_Chr3g0101651 33.462 517 308 13 10 511 9 504 1.01e-90 286
Msa1115900 MtrunA17_Chr8g0339331 34.870 499 291 12 27 505 22 506 3.81e-90 285
Msa1115900 MtrunA17_Chr5g0401691 34.462 502 298 10 8 505 26 500 1.49e-89 283
Msa1115900 MtrunA17_Chr4g0011921 33.529 510 306 10 6 505 3 489 1.53e-89 283
Msa1115900 MtrunA17_Chr5g0446161 32.177 519 318 10 10 515 5 502 2.32e-89 283
Msa1115900 MtrunA17_Chr6g0466331 32.934 501 296 13 1 488 1 474 6.00e-89 282
Msa1115900 MtrunA17_Chr4g0024771 32.809 509 313 9 11 511 12 499 8.10e-89 281
Msa1115900 MtrunA17_Chr6g0465511 32.866 499 299 13 1 488 1 474 1.02e-88 281
Msa1115900 MtrunA17_Chr8g0339311 31.528 517 320 12 9 504 6 509 1.35e-88 281
Msa1115900 MtrunA17_Chr6g0451751 33.922 510 310 9 14 505 15 515 1.46e-88 281
Msa1115900 MtrunA17_Chr4g0053621 33.661 508 301 7 9 505 5 487 1.47e-88 281
Msa1115900 MtrunA17_Chr3g0101761 34.394 503 298 10 11 503 10 490 1.83e-88 280
Msa1115900 MtrunA17_Chr4g0020041 32.252 524 304 13 9 511 8 501 2.18e-88 280
Msa1115900 MtrunA17_Chr5g0431501 34.581 454 279 7 41 488 34 475 2.24e-88 280
Msa1115900 MtrunA17_Chr5g0431461 34.581 454 279 7 41 488 34 475 2.24e-88 280
Msa1115900 MtrunA17_Chr8g0357421 34.236 517 303 13 13 516 12 504 2.64e-88 280
Msa1115900 MtrunA17_Chr4g0011901 34.836 488 289 9 28 505 21 489 4.12e-87 276
Msa1115900 MtrunA17_Chr5g0405001 32.298 483 296 7 41 509 45 510 4.86e-87 277
Msa1115900 MtrunA17_Chr6g0458561 33.925 507 302 11 17 505 28 519 1.56e-86 276
Msa1115900 MtrunA17_Chr8g0372251 33.131 495 295 8 35 510 26 503 3.50e-86 275
Msa1115900 MtrunA17_Chr5g0431511 33.772 456 280 8 41 488 34 475 3.69e-86 275
Msa1115900 MtrunA17_Chr8g0357431 35.135 518 298 13 13 516 12 505 9.03e-86 273
Msa1115900 MtrunA17_Chr4g0035921 30.755 530 321 10 6 514 11 515 9.42e-86 274
Msa1115900 MtrunA17_Chr6g0451691 33.462 520 308 12 8 505 16 519 1.98e-85 273
Msa1115900 MtrunA17_Chr8g0356001 33.075 517 311 13 7 510 10 504 2.47e-85 272
Msa1115900 MtrunA17_Chr4g0057001 33.610 482 287 7 41 510 51 511 5.16e-84 269
Msa1115900 MtrunA17_Chr6g0451741 32.443 524 316 12 4 505 30 537 6.40e-84 270
Msa1115900 MtrunA17_Chr5g0446151 32.712 483 296 10 41 515 42 503 7.68e-84 268
Msa1115900 MtrunA17_Chr3g0101831 34.008 494 295 10 11 493 10 483 9.65e-84 268
Msa1115900 MtrunA17_Chr5g0430111 34.722 432 266 6 1 424 1 424 9.84e-84 266
Msa1115900 MtrunA17_Chr6g0463801 32.636 478 296 9 41 511 38 496 1.36e-83 268
Msa1115900 MtrunA17_Chr4g0052861 34.381 509 286 12 9 505 11 483 1.45e-83 268
Msa1115900 MtrunA17_Chr4g0052851 34.707 461 270 8 37 493 29 462 2.17e-83 267
Msa1115900 MtrunA17_Chr1g0167321 34.961 512 287 13 10 503 6 489 2.41e-83 267
Msa1115900 MtrunA17_Chr3g0101671 31.034 522 316 14 9 510 11 508 3.47e-83 267
Msa1115900 MtrunA17_Chr7g0218601 32.203 472 298 9 21 486 15 470 5.65e-83 266
Msa1115900 MtrunA17_Chr3g0082701 32.576 528 319 12 1 505 3 516 3.20e-82 265
Msa1115900 MtrunA17_Chr7g0218611 32.826 460 287 7 33 486 28 471 4.01e-82 264
Msa1115900 MtrunA17_Chr2g0304871 33.190 464 289 7 40 491 38 492 1.25e-81 263
Msa1115900 MtrunA17_Chr4g0008101 32.755 519 309 11 10 505 14 515 1.40e-81 263
Msa1115900 MtrunA17_Chr4g0052881 33.008 512 304 8 4 505 2 484 4.77e-81 261
Msa1115900 MtrunA17_Chr5g0395331 33.806 494 281 13 20 494 20 486 3.43e-80 259
Msa1115900 MtrunA17_Chr7g0246221 32.669 502 316 7 9 503 6 492 7.10e-80 258
Msa1115900 MtrunA17_Chr5g0395321 30.986 497 303 10 8 494 13 479 7.55e-80 259
Msa1115900 MtrunA17_Chr5g0419691 32.251 462 295 7 29 486 20 467 3.59e-79 256
Msa1115900 MtrunA17_Chr6g0466901 31.721 517 304 13 1 491 1 494 8.38e-79 256
Msa1115900 MtrunA17_Chr1g0156061 32.826 460 239 7 29 486 47 438 9.54e-79 254
Msa1115900 MtrunA17_Chr6g0451641 33.333 534 306 17 6 515 11 518 1.20e-78 255
Msa1115900 MtrunA17_Chr4g0017411 34.304 481 278 11 21 496 15 462 1.27e-78 254
Msa1115900 MtrunA17_Chr1g0164211 31.084 489 308 9 37 514 26 496 1.50e-78 254
Msa1115900 MtrunA17_Chr8g0355961 33.789 512 304 13 12 510 15 504 1.55e-78 254
Msa1115900 MtrunA17_Chr4g0011871 31.635 471 302 7 29 492 20 477 1.95e-78 254
Msa1115900 MtrunA17_Chr1g0160851 31.985 519 305 13 9 514 16 499 4.25e-78 253
Msa1115900 MtrunA17_Chr1g0162801 32.079 505 285 14 14 493 13 484 5.25e-78 253
Msa1115900 MtrunA17_Chr6g0451781 32.389 494 307 8 30 505 64 548 3.22e-77 253
Msa1115900 MtrunA17_Chr4g0056951 32.159 454 284 7 64 509 68 505 8.65e-77 250
Msa1115900 MtrunA17_Chr1g0205361 32.577 485 302 10 38 514 32 499 1.78e-76 249
Msa1115900 MtrunA17_Chr2g0296661 34.267 464 276 7 52 505 44 488 1.82e-76 249
Msa1115900 MtrunA17_Chr6g0466941 31.335 517 307 13 1 491 1 495 2.89e-76 249
Msa1115900 MtrunA17_Chr5g0395381 31.643 493 280 11 8 494 13 454 3.08e-76 248
Msa1115900 MtrunA17_Chr4g0011881 31.590 459 294 9 41 492 31 476 4.44e-76 248
Msa1115900 MtrunA17_Chr7g0254641 30.515 485 306 8 41 507 38 509 7.94e-76 248
Msa1115900 MtrunA17_Chr4g0039901 32.784 485 284 10 35 503 30 488 1.20e-75 247
Msa1115900 MtrunA17_Chr3g0101741 32.662 447 264 10 75 510 1 421 1.26e-75 244
Msa1115900 MtrunA17_Chr4g0039391 31.410 468 299 8 50 509 45 498 1.53e-75 247
Msa1115900 MtrunA17_Chr7g0265611 29.688 512 325 10 10 509 26 514 1.74e-75 247
Msa1115900 MtrunA17_Chr7g0246131 33.792 509 301 11 7 501 5 491 9.35e-75 244
Msa1115900 MtrunA17_Chr2g0314721 32.692 520 294 15 8 510 12 492 3.02e-74 243
Msa1115900 MtrunA17_Chr4g0046631 32.495 477 299 8 40 505 46 510 3.04e-74 244
Msa1115900 MtrunA17_Chr2g0314731 33.602 497 280 15 13 488 3 470 3.18e-74 243
Msa1115900 MtrunA17_Chr7g0255531 28.911 505 323 11 13 505 9 489 3.67e-74 243
Msa1115900 MtrunA17_Chr1g0200961 30.724 511 313 9 17 512 13 497 1.24e-72 239
Msa1115900 MtrunA17_Chr1g0176831 31.762 488 307 10 6 488 34 500 2.74e-72 238
Msa1115900 MtrunA17_Chr7g0246151 33.269 517 303 13 3 503 1 491 4.50e-72 238
Msa1115900 MtrunA17_Chr2g0280261 32.403 466 277 10 41 493 35 475 5.33e-72 237
Msa1115900 MtrunA17_Chr1g0174431 49.296 213 102 3 306 516 1 209 2.99e-71 226
Msa1115900 MtrunA17_Chr1g0205371 32.640 481 299 9 38 510 33 496 8.09e-70 231
Msa1115900 MtrunA17_Chr5g0406651 31.340 485 301 11 21 492 12 477 9.62e-70 231
Msa1115900 MtrunA17_Chr2g0296651 30.159 504 316 10 11 505 7 483 6.34e-68 226
Msa1115900 MtrunA17_Chr7g0246121 31.049 467 292 9 51 505 45 493 2.48e-67 225
Msa1115900 MtrunA17_Chr1g0213671 30.266 489 304 13 41 510 35 505 2.67e-64 218
Msa1115900 MtrunA17_Chr7g0246181 30.000 520 323 12 9 511 6 501 2.96e-62 211
Msa1115900 MtrunA17_Chr1g0197881 28.932 515 324 16 11 514 3 486 3.25e-62 211
Msa1115900 MtrunA17_Chr1g0200951 29.352 494 309 13 28 505 52 521 5.38e-62 211
Msa1115900 MtrunA17_Chr1g0197851 28.238 471 314 10 21 486 15 466 7.96e-62 210
Msa1115900 MtrunA17_Chr1g0197891 28.540 459 305 9 34 486 25 466 2.08e-61 209
Msa1115900 MtrunA17_Chr6g0451681 28.862 492 280 10 30 515 51 478 4.14e-61 208
Msa1115900 MtrunA17_Chr1g0197871 28.243 478 308 13 41 511 35 484 2.36e-60 206
Msa1115900 MtrunA17_Chr1g0174421 35.314 303 190 4 11 309 19 319 8.70e-59 197
Msa1115900 MtrunA17_Chr5g0419451 29.372 446 288 10 68 507 88 512 3.61e-58 201
Msa1115900 MtrunA17_Chr1g0198191 26.550 516 336 13 8 505 18 508 4.01e-57 198
Msa1115900 MtrunA17_Chr5g0430071 31.707 369 225 9 152 509 2 354 3.96e-56 191
Msa1115900 MtrunA17_Chr5g0432751 28.364 483 315 13 36 503 29 495 1.79e-54 191
Msa1115900 MtrunA17_Chr1g0210091 28.858 499 332 12 14 502 41 526 8.62e-54 190
Msa1115900 MtrunA17_Chr8g0377341 28.118 473 314 11 44 510 71 523 3.94e-53 188
Msa1115900 MtrunA17_Chr8g0346261 27.941 476 308 11 42 505 86 538 5.43e-53 188
Msa1115900 MtrunA17_Chr5g0431591 31.832 333 204 6 186 511 1 317 8.34e-53 181
Msa1115900 MtrunA17_Chr8g0390871 38.991 218 118 3 296 509 17 223 1.42e-52 178
Msa1115900 MtrunA17_Chr4g0058211 41.951 205 106 3 305 507 18 211 6.29e-51 173
Msa1115900 MtrunA17_Chr8g0370651 27.872 531 330 20 6 507 11 517 1.95e-49 178
Msa1115900 MtrunA17_Chr2g0310351 38.756 209 113 4 306 510 1 198 3.60e-49 168
Msa1115900 MtrunA17_Chr8g0370641 27.151 523 331 19 12 507 14 513 1.81e-48 175
Msa1115900 MtrunA17_Chr4g0030741 31.902 326 199 6 13 329 38 349 2.05e-48 171
Msa1115900 MtrunA17_Chr1g0160861 33.910 289 167 7 234 514 68 340 4.83e-48 169
Msa1115900 MtrunA17_Chr2g0280081 27.074 458 306 9 64 508 558 1000 6.21e-48 178
Msa1115900 MtrunA17_Chr2g0280081 27.840 449 296 9 64 499 57 490 1.47e-42 162
Msa1115900 MtrunA17_Chr5g0413911 26.854 499 327 13 41 513 43 529 2.01e-47 172
Msa1115900 MtrunA17_Chr3g0107541 28.673 422 267 12 77 481 90 494 2.37e-46 169
Msa1115900 MtrunA17_Chr4g0074581 26.265 514 345 14 9 505 39 535 3.02e-46 169
Msa1115900 MtrunA17_Chr1g0207851 35.581 267 158 3 50 304 48 312 4.59e-46 164
Msa1115900 MtrunA17_Chr6g0451811 39.024 205 115 3 302 505 1 196 1.21e-45 159
Msa1115900 MtrunA17_Chr4g0046681 36.087 230 133 3 277 505 6 222 3.26e-45 159
Msa1115900 MtrunA17_Chr3g0107611 26.800 500 316 16 8 481 24 499 9.46e-45 165
Msa1115900 MtrunA17_Chr4g0011941 38.942 208 112 3 306 509 1 197 1.73e-44 155
Msa1115900 MtrunA17_Chr2g0280071 27.586 493 302 13 41 505 64 529 8.01e-44 165
Msa1115900 MtrunA17_Chr2g0280121 27.564 468 285 11 65 505 62 502 1.49e-43 161
Msa1115900 MtrunA17_Chr5g0409051 24.848 495 335 12 33 505 22 501 6.76e-43 159
Msa1115900 MtrunA17_Chr6g0463621 37.949 195 103 3 306 493 1 184 9.63e-43 151
Msa1115900 MtrunA17_Chr2g0314781 43.452 168 83 3 322 488 1 157 2.03e-42 149
Msa1115900 MtrunA17_Chr8g0387101 27.975 479 270 14 64 505 59 499 2.59e-42 158
Msa1115900 MtrunA17_Chr5g0446101 28.399 331 211 7 186 510 1 311 3.57e-41 150
Msa1115900 MtrunA17_Chr4g0011851 38.095 189 105 2 299 486 9 186 1.78e-40 145
Msa1115900 MtrunA17_Chr3g0101591 35.071 211 122 3 305 511 38 237 5.84e-39 142
Msa1115900 MtrunA17_Chr6g0451771 33.632 223 133 3 297 513 13 226 6.65e-39 141
Msa1115900 MtrunA17_Chr6g0463611 30.537 298 190 9 9 301 21 306 6.66e-39 144
Msa1115900 MtrunA17_Chr2g0334021 25.684 475 317 13 32 492 27 479 2.45e-38 146
Msa1115900 MtrunA17_Chr8g0364651 25.239 523 329 15 9 505 5 491 2.70e-38 146
Msa1115900 MtrunA17_Chr2g0280041 26.237 465 295 9 64 505 89 528 6.36e-37 143
Msa1115900 MtrunA17_Chr3g0086681 40.476 168 89 3 352 515 11 171 8.66e-37 134
Msa1115900 MtrunA17_Chr4g0046661 37.500 208 120 3 299 505 18 216 9.65e-37 135
Msa1115900 MtrunA17_Chr5g0445371 31.923 260 130 6 246 500 1 218 1.27e-36 135
Msa1115900 MtrunA17_Chr5g0445751 30.844 308 191 10 10 306 11 307 1.65e-35 135
Msa1115900 MtrunA17_Chr4g0011861 29.965 287 192 5 29 308 20 304 6.57e-35 133
Msa1115900 MtrunA17_Chr5g0402981 37.500 192 109 4 316 505 2 184 7.65e-35 129
Msa1115900 MtrunA17_Chr5g0445351 39.181 171 89 3 334 500 52 211 2.71e-34 128
Msa1115900 MtrunA17_Chr5g0423621 37.436 195 105 4 322 512 1 182 2.67e-33 124
Msa1115900 MtrunA17_Chr6g0477081 35.000 200 117 3 217 415 54 241 3.95e-33 126
Msa1115900 MtrunA17_Chr5g0445761 33.333 213 127 3 306 514 1 202 4.35e-33 125
Msa1115900 MtrunA17_Chr4g0046701 41.509 159 83 2 348 505 1 150 9.99e-33 122
Msa1115900 MtrunA17_Chr5g0430171 33.023 215 141 1 1 215 1 212 1.03e-32 124
Msa1115900 MtrunA17_Chr4g0011931 30.100 299 195 6 12 304 5 295 2.09e-32 125
Msa1115900 MtrunA17_Chr5g0402971 28.625 269 181 3 30 287 30 298 1.50e-31 124
Msa1115900 MtrunA17_Chr2g0280011 33.981 206 121 3 309 508 11 207 1.88e-31 120
Msa1115900 MtrunA17_Chr5g0430041 40.341 176 87 6 332 500 1 165 2.02e-31 119
Msa1115900 MtrunA17_Chr8g0364631 26.358 497 304 17 41 505 33 499 5.83e-31 125
Msa1115900 MtrunA17_Chr5g0430151 36.066 183 101 4 332 509 1 172 6.38e-30 115
Msa1115900 MtrunA17_Chr4g0046671 27.046 281 194 4 31 301 35 314 1.71e-29 118
Msa1115900 MtrunA17_Chr2g0280061 33.005 203 121 3 309 505 11 204 2.35e-29 115
Msa1115900 MtrunA17_Chr3g0107551 32.402 179 110 3 305 481 4 173 1.18e-28 113
Msa1115900 MtrunA17_Chr3g0105761 32.673 202 125 4 307 507 1 192 1.22e-28 112
Msa1115900 MtrunA17_Chr0c19g0493771 23.831 449 289 15 71 497 218 635 3.10e-28 119
Msa1115900 MtrunA17_Chr5g0445411 39.744 156 90 3 14 167 21 174 1.39e-27 108
Msa1115900 MtrunA17_Chr5g0445361 41.176 136 66 3 379 511 12 136 2.72e-27 107
Msa1115900 MtrunA17_Chr1g0179811 25.164 457 278 15 69 497 106 526 6.50e-27 114
Msa1115900 MtrunA17_Chr4g0076171 32.086 187 93 4 322 503 1 158 3.11e-26 105
Msa1115900 MtrunA17_Chr3g0101541 39.535 129 66 2 356 483 3 120 4.70e-26 103
Msa1115900 MtrunA17_Chr4g0046691 26.616 263 187 4 41 301 40 298 8.97e-26 107
Msa1115900 MtrunA17_Chr3g0117301 35.938 128 70 3 357 483 1 117 1.55e-25 101
Msa1115900 MtrunA17_Chr3g0116731 36.129 155 75 4 357 510 1 132 4.39e-25 100
Msa1115900 MtrunA17_Chr2g0293411 26.170 470 278 19 34 480 35 458 7.80e-25 107
Msa1115900 MtrunA17_Chr3g0135841 21.976 496 333 13 42 501 44 521 1.23e-24 107
Msa1115900 MtrunA17_Chr1g0151221 22.445 499 334 15 37 502 36 514 2.45e-24 106
Msa1115900 MtrunA17_Chr8g0381571 25.339 442 271 17 41 464 44 444 2.90e-24 105
Msa1115900 MtrunA17_Chr8g0372591 36.434 129 81 1 304 431 1 129 3.04e-24 98.6
Msa1115900 MtrunA17_Chr4g0028321 36.232 138 75 2 375 509 27 154 4.26e-24 98.6
Msa1115900 MtrunA17_Chr8g0381541 25.339 442 271 17 41 464 44 444 4.48e-24 105
Msa1115900 MtrunA17_Chr5g0431631 36.879 141 84 2 11 149 24 161 4.58e-24 98.6
Msa1115900 MtrunA17_Chr5g0396521 23.656 465 307 16 70 496 102 556 5.67e-24 105
Msa1115900 MtrunA17_Chr5g0444981 36.098 205 109 7 309 510 12 197 7.09e-24 99.8
Msa1115900 MtrunA17_Chr6g0451801 27.090 299 194 8 12 291 16 309 1.87e-23 101
Msa1115900 MtrunA17_Chr1g0203141 28.173 323 189 14 174 483 196 488 2.87e-23 103
Msa1115900 MtrunA17_Chr5g0403931 24.470 519 325 17 6 509 4 470 4.57e-23 102
Msa1115900 MtrunA17_Chr4g0030761 34.356 163 75 4 357 510 1 140 6.73e-23 94.7
Msa1115900 MtrunA17_Chr6g0479681 26.769 325 191 11 216 511 224 530 1.03e-22 101
Msa1115900 MtrunA17_Chr1g0203151 26.829 287 183 9 233 511 245 512 1.82e-22 100
Msa1115900 MtrunA17_Chr4g0004601 22.197 446 290 14 54 479 92 500 4.23e-22 99.8
Msa1115900 MtrunA17_Chr3g0117321 41.880 117 68 0 42 158 9 125 4.30e-22 92.0
Msa1115900 MtrunA17_Chr6g0472221 24.439 446 289 20 54 483 86 499 2.94e-21 97.1
Msa1115900 MtrunA17_Chr8g0369791 22.699 489 318 14 6 485 4 441 8.00e-21 95.1
Msa1115900 MtrunA17_Chr8g0351401 23.028 469 311 16 44 485 39 484 8.52e-21 95.5
Msa1115900 MtrunA17_Chr3g0141801 24.172 513 328 17 11 510 15 479 1.50e-20 94.7
Msa1115900 MtrunA17_Chr7g0235261 21.973 446 293 14 54 480 71 480 6.11e-20 92.8
Msa1115900 MtrunA17_Chr2g0310371 39.831 118 71 0 41 158 29 146 7.38e-20 86.3
Msa1115900 MtrunA17_Chr4g0026941 23.094 446 288 14 70 488 99 516 9.51e-20 92.4
Msa1115900 MtrunA17_Chr6g0451761 27.857 280 161 10 19 285 21 272 1.05e-19 89.4
Msa1115900 MtrunA17_Chr1g0176851 28.631 241 157 7 127 360 2 234 1.83e-19 87.4
Msa1115900 MtrunA17_Chr3g0128461 21.445 429 304 11 64 483 93 497 3.04e-19 90.9
Msa1115900 MtrunA17_Chr7g0215181 23.810 441 287 18 56 483 78 482 3.97e-19 90.5
Msa1115900 MtrunA17_Chr8g0339861 29.839 248 143 10 227 464 215 441 9.40e-19 89.0
Msa1115900 MtrunA17_Chr5g0400411 28.708 209 125 6 263 464 253 444 9.61e-19 89.0
Msa1115900 MtrunA17_Chr2g0321171 24.573 468 296 17 62 506 59 492 2.07e-18 88.2
Msa1115900 MtrunA17_Chr8g0354531 24.272 309 206 7 183 483 330 618 4.31e-18 87.8
Msa1115900 MtrunA17_Chr1g0163491 24.466 515 309 16 16 489 25 500 4.51e-18 87.0
Msa1115900 MtrunA17_Chr6g0449361 22.985 335 221 8 162 476 152 469 9.39e-18 86.3
Msa1115900 MtrunA17_Chr6g0457421 21.581 468 309 17 33 483 54 480 1.79e-17 85.1
Msa1115900 MtrunA17_Chr4g0038271 22.917 432 272 11 85 483 130 533 1.99e-17 85.5
Msa1115900 MtrunA17_Chr6g0449351 22.687 335 222 8 162 476 112 429 4.55e-17 84.0
Msa1115900 MtrunA17_Chr3g0107501 24.413 426 264 15 70 481 68 449 7.20e-17 83.2
Msa1115900 MtrunA17_Chr1g0164371 21.532 483 330 12 15 490 18 458 9.55e-17 82.8
Msa1115900 MtrunA17_Chr7g0219961 25.877 228 149 4 265 489 234 444 1.01e-16 82.8
Msa1115900 MtrunA17_Chr8g0354511 23.991 446 285 16 59 483 85 497 1.03e-16 82.8
Msa1115900 MtrunA17_Chr1g0153371 21.355 487 336 15 6 487 3 447 1.03e-16 82.8
Msa1115900 MtrunA17_Chr5g0429651 24.198 405 261 16 94 476 94 474 1.25e-16 82.8
Msa1115900 MtrunA17_Chr6g0455461 26.754 228 147 5 265 489 235 445 1.27e-16 82.4
Msa1115900 MtrunA17_Chr6g0484771 33.600 125 83 0 75 199 1 125 1.59e-16 76.6
Msa1115900 MtrunA17_Chr7g0248991 22.840 324 210 10 129 431 55 359 1.81e-16 81.3
Msa1115900 MtrunA17_Chr1g0163281 21.242 499 341 15 16 489 27 498 1.90e-16 82.0
Msa1115900 MtrunA17_Chr5g0400421 28.571 175 106 3 294 464 286 445 2.97e-16 81.3
Msa1115900 MtrunA17_Chr8g0334941 27.542 236 151 7 255 483 79 301 3.15e-16 80.1
Msa1115900 MtrunA17_Chr3g0078411 27.004 237 150 6 256 489 229 445 3.30e-16 81.3
Msa1115900 MtrunA17_Chr4g0044851 22.637 455 306 13 36 485 33 446 3.78e-16 80.9
Msa1115900 MtrunA17_Chr2g0313751 24.169 331 220 9 161 483 209 516 4.61e-16 80.9
Msa1115900 MtrunA17_Chr2g0293421 21.616 458 311 15 34 480 39 459 5.40e-16 80.5
Msa1115900 MtrunA17_Chr5g0430051 35.922 103 63 1 7 109 8 107 5.80e-16 74.3
Msa1115900 MtrunA17_Chr2g0313771 20.776 438 308 13 59 483 85 496 5.99e-16 80.5
Msa1115900 MtrunA17_Chr1g0184421 21.766 487 307 20 31 480 23 472 6.02e-16 80.5
Msa1115900 MtrunA17_Chr8g0371761 29.870 154 86 3 325 465 1 145 9.05e-16 74.7
Msa1115900 MtrunA17_Chr2g0288661 22.884 319 220 7 169 479 187 487 1.25e-15 79.7
Msa1115900 MtrunA17_Chr8g0348751 22.477 436 283 14 86 492 83 492 1.78e-15 79.3
Msa1115900 MtrunA17_Chr8g0334891 28.390 236 149 8 255 483 234 456 2.07e-15 78.6
Msa1115900 MtrunA17_Chr8g0354571 23.239 426 290 12 69 483 98 497 2.71e-15 78.6
Msa1115900 MtrunA17_Chr8g0373441 23.908 435 270 18 14 425 9 405 2.83e-15 77.8
Msa1115900 MtrunA17_Chr2g0307291 22.601 323 224 7 169 483 187 491 2.88e-15 78.6
Msa1115900 MtrunA17_Chr5g0408181 21.289 512 341 16 7 509 4 462 3.07e-15 78.2
Msa1115900 MtrunA17_Chr8g0387001 21.795 468 305 16 44 476 30 471 4.29e-15 77.8
Msa1115900 MtrunA17_Chr6g0472171 34.615 130 71 4 358 484 14 132 4.40e-15 72.8
Msa1115900 MtrunA17_Chr4g0044841 21.339 478 323 12 22 492 23 454 5.65e-15 77.4
Msa1115900 MtrunA17_Chr5g0431601 43.210 81 45 1 77 157 3 82 5.97e-15 70.1
Msa1115900 MtrunA17_Chr5g0445541 41.176 102 55 3 11 110 12 110 6.31e-15 71.6
Msa1115900 MtrunA17_Chr7g0214931 23.143 350 234 10 81 407 98 435 6.89e-15 77.0
Msa1115900 MtrunA17_Chr4g0063221 27.528 178 117 2 307 483 326 492 8.01e-15 77.0
Msa1115900 MtrunA17_Chr3g0116721 30.303 198 115 6 148 332 3 190 9.08e-15 73.2
Msa1115900 MtrunA17_Chr1g0178971 22.947 475 306 19 55 502 57 498 1.04e-14 76.6
Msa1115900 MtrunA17_Chr3g0119681 24.678 466 304 18 44 480 40 487 1.25e-14 76.6
Msa1115900 MtrunA17_Chr3g0104351 21.957 419 274 16 86 477 92 484 1.63e-14 76.3
Msa1115900 MtrunA17_Chr6g0449381 24.082 245 167 5 241 476 237 471 2.69e-14 75.5
Msa1115900 MtrunA17_Chr8g0372711 23.790 248 169 4 243 487 232 462 3.41e-14 75.1
Msa1115900 MtrunA17_Chr7g0225531 22.709 502 339 16 10 488 14 489 4.02e-14 74.7
Msa1115900 MtrunA17_Chr2g0308651 23.684 380 242 13 129 483 32 388 4.42e-14 74.3
Msa1115900 MtrunA17_Chr4g0004481 25.806 310 190 10 188 476 168 458 4.98e-14 74.3
Msa1115900 MtrunA17_Chr1g0182861 33.333 126 72 3 360 484 23 137 5.22e-14 70.1
Msa1115900 MtrunA17_Chr8g0351391 22.420 281 173 8 215 483 236 483 6.44e-14 74.3
Msa1115900 MtrunA17_Chr4g0056981 47.222 72 37 1 332 402 1 72 6.94e-14 66.6
Msa1115900 MtrunA17_Chr1g0154731 23.967 242 161 5 244 483 256 476 8.73e-14 73.6
Msa1115900 MtrunA17_Chr2g0313781 23.145 337 216 10 161 483 194 501 1.08e-13 73.6
Msa1115900 MtrunA17_Chr1g0204271 24.893 233 145 7 269 489 270 484 1.09e-13 73.6
Msa1115900 MtrunA17_Chr4g0076181 42.857 70 40 0 75 144 1 70 1.34e-13 68.9
Msa1115900 MtrunA17_Chr6g0458571 38.679 106 57 3 18 117 29 132 1.76e-13 67.4
Msa1115900 MtrunA17_Chr1g0163371 27.700 213 134 6 283 489 3 201 1.88e-13 69.7
Msa1115900 MtrunA17_Chr8g0380471 27.660 188 118 3 304 488 283 455 2.71e-13 72.0
Msa1115900 MtrunA17_Chr2g0310361 27.206 136 97 2 170 304 4 138 3.84e-13 67.0
Msa1115900 MtrunA17_Chr3g0089361 25.000 232 153 6 255 483 238 451 7.10e-13 70.9
Msa1115900 MtrunA17_Chr8g0351461 23.221 267 180 7 234 486 229 484 1.06e-12 70.5
Msa1115900 MtrunA17_Chr1g0163451 24.620 329 197 13 193 489 194 503 1.25e-12 70.1
Msa1115900 MtrunA17_Chr1g0183611 23.370 368 229 12 152 489 60 404 2.53e-12 68.9
Msa1115900 MtrunA17_Chr1g0163421 22.866 328 204 10 193 489 210 519 3.01e-12 68.9
Msa1115900 MtrunA17_Chr1g0171041 22.928 362 234 11 157 489 141 486 4.95e-12 68.2
Msa1115900 MtrunA17_Chr6g0463551 29.008 131 85 2 267 389 59 189 5.62e-12 65.1
Msa1115900 MtrunA17_Chr8g0351441 22.472 267 182 6 234 486 229 484 7.19e-12 67.8
Msa1115900 MtrunA17_Chr8g0380931 23.394 218 145 5 273 483 277 479 1.44e-11 66.6
Msa1115900 MtrunA17_Chr1g0184461 21.616 495 332 18 12 479 6 471 1.47e-11 66.6
Msa1115900 MtrunA17_Chr7g0262111 21.041 442 296 12 56 483 76 478 1.72e-11 66.6
Msa1115900 MtrunA17_Chr7g0227281 22.039 363 242 12 132 476 121 460 2.09e-11 66.2
Msa1115900 MtrunA17_Chr3g0107511 21.860 430 270 11 70 481 68 449 2.97e-11 65.9
Msa1115900 MtrunA17_Chr1g0193811 20.267 449 323 14 45 483 66 489 3.70e-11 65.5
Msa1115900 MtrunA17_Chr3g0089351 22.414 232 159 4 255 483 156 369 5.10e-11 64.7
Msa1115900 MtrunA17_Chr5g0443731 23.529 255 168 6 257 501 227 464 6.26e-11 64.7
Msa1115900 MtrunA17_Chr1g0163351 23.602 322 199 12 188 479 170 474 7.44e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1115900 AT2G42250.1 47.843 510 261 3 8 516 9 514 2.14e-173 499
Msa1115900 AT5G06905.1 45.224 513 268 8 14 516 7 516 1.86e-156 456
Msa1115900 AT3G20940.1 42.194 474 263 6 41 511 43 508 9.22e-131 390
Msa1115900 AT3G20140.1 44.654 477 248 8 38 511 40 503 1.59e-129 387
Msa1115900 AT4G15360.1 40.909 506 279 10 10 509 11 502 7.17e-129 385
Msa1115900 AT3G20110.1 40.962 520 283 10 1 516 2 501 3.68e-127 381
Msa1115900 AT3G20100.1 40.856 514 292 7 7 516 8 513 6.86e-127 380
Msa1115900 AT3G20090.2 42.431 469 258 6 51 516 54 513 7.36e-127 380
Msa1115900 AT1G50520.1 43.100 471 257 6 49 516 52 514 1.02e-126 380
Msa1115900 AT3G20950.1 40.039 517 290 10 1 509 5 509 1.33e-126 380
Msa1115900 AT3G20120.4 42.466 511 280 7 8 516 12 510 7.55e-126 377
Msa1115900 AT5G47990.1 43.290 462 251 7 51 510 53 505 7.58e-125 375
Msa1115900 AT5G06900.1 39.096 509 279 9 11 511 6 491 2.88e-124 373
Msa1115900 AT5G42580.1 43.640 456 236 7 62 516 62 497 1.77e-122 368
Msa1115900 AT1G50560.1 42.766 470 255 9 51 515 54 514 1.49e-121 367
Msa1115900 AT3G32047.1 41.778 450 244 7 51 496 53 488 1.83e-120 363
Msa1115900 AT4G15350.1 42.612 467 250 10 51 510 45 500 2.20e-120 363
Msa1115900 AT3G20130.1 40.851 470 264 9 51 516 53 512 6.46e-119 360
Msa1115900 AT3G20960.2 41.410 454 255 5 65 516 67 511 1.07e-118 359
Msa1115900 AT2G27000.1 41.432 461 257 8 51 507 50 501 1.15e-117 357
Msa1115900 AT2G14100.1 39.871 464 265 7 51 511 54 506 6.99e-115 349
Msa1115900 AT3G20080.2 39.662 474 273 8 41 510 43 507 2.32e-111 340
Msa1115900 AT3G20080.1 39.662 474 273 8 41 510 43 507 2.32e-111 340
Msa1115900 AT4G15330.1 39.112 473 272 8 42 510 40 500 6.94e-110 337
Msa1115900 AT3G20960.1 41.247 417 234 5 102 516 1 408 4.07e-108 328
Msa1115900 AT3G20130.2 39.723 433 248 8 87 516 62 484 1.33e-106 327
Msa1115900 AT4G15380.1 38.000 450 262 7 65 511 68 503 4.69e-106 327
Msa1115900 AT1G28430.1 36.965 514 307 9 1 510 5 505 6.53e-106 327
Msa1115900 AT3G20120.2 43.342 383 207 5 135 516 1 374 1.43e-103 315
Msa1115900 AT3G20120.3 43.342 383 207 5 135 516 1 374 1.43e-103 315
Msa1115900 AT3G20120.1 43.342 383 207 5 135 516 1 374 1.43e-103 315
Msa1115900 AT5G07990.1 36.416 519 306 11 6 515 2 505 2.18e-102 317
Msa1115900 AT3G20090.1 41.667 384 213 5 135 516 1 375 6.68e-100 306
Msa1115900 AT4G15330.2 37.421 473 252 9 42 510 40 472 1.95e-98 306
Msa1115900 AT4G13310.1 36.105 493 288 10 29 512 23 497 1.05e-97 305
Msa1115900 AT2G27010.1 37.581 463 254 11 51 507 46 479 1.23e-97 304
Msa1115900 AT2G30770.1 35.113 487 289 9 35 512 28 496 2.97e-97 303
Msa1115900 AT2G05180.1 41.149 435 232 5 1 424 5 426 2.12e-95 297
Msa1115900 AT3G26300.1 31.907 514 325 10 10 515 4 500 3.97e-94 295
Msa1115900 AT1G11610.1 33.470 487 297 9 35 512 28 496 1.82e-93 293
Msa1115900 AT1G11610.2 34.188 468 281 9 35 493 28 477 4.78e-91 287
Msa1115900 AT2G30750.1 34.615 494 293 10 29 513 25 497 5.73e-91 287
Msa1115900 AT1G13080.1 34.706 510 301 11 15 510 8 499 6.79e-91 287
Msa1115900 AT4G13290.1 34.483 493 288 11 29 512 24 490 2.32e-90 285
Msa1115900 AT3G48280.1 34.608 497 298 10 15 505 6 481 1.44e-89 283
Msa1115900 AT4G37330.1 34.449 508 298 9 3 505 1 478 1.56e-89 283
Msa1115900 AT4G31500.1 33.045 463 295 7 30 488 20 471 2.19e-89 283
Msa1115900 AT2G24180.1 33.197 488 288 9 41 514 37 500 6.39e-89 282
Msa1115900 AT5G57260.1 33.540 483 297 9 39 510 29 498 6.49e-89 282
Msa1115900 AT3G26310.1 31.445 512 323 10 6 509 2 493 9.83e-89 281
Msa1115900 AT4G12300.1 33.056 481 302 7 41 514 43 510 1.24e-88 281
Msa1115900 AT3G26330.1 32.990 485 301 11 39 514 30 499 1.79e-88 281
Msa1115900 AT3G48300.1 34.820 471 282 9 42 509 31 479 2.19e-88 280
Msa1115900 AT3G48300.2 34.820 471 282 9 42 509 33 481 2.31e-88 280
Msa1115900 AT5G24950.1 33.612 479 290 9 41 509 33 493 4.27e-88 280
Msa1115900 AT5G67310.1 32.353 510 310 11 5 507 13 494 4.86e-88 280
Msa1115900 AT1G13110.1 32.186 494 312 8 13 496 7 487 8.23e-88 279
Msa1115900 AT4G12320.1 31.721 517 328 7 3 510 8 508 1.19e-87 279
Msa1115900 AT3G26280.1 33.858 508 295 9 21 510 15 499 2.84e-87 278
Msa1115900 AT3G26280.2 33.858 508 295 9 21 510 32 516 3.58e-87 278
Msa1115900 AT3G20080.4 38.095 378 224 5 135 510 1 370 1.64e-86 272
Msa1115900 AT3G20080.5 38.095 378 224 5 135 510 1 370 1.64e-86 272
Msa1115900 AT3G20080.6 38.095 378 224 5 135 510 1 370 1.64e-86 272
Msa1115900 AT3G20080.3 38.095 378 224 5 135 510 1 370 1.64e-86 272
Msa1115900 AT4G37370.1 35.913 504 282 14 12 505 7 479 1.74e-86 275
Msa1115900 AT3G26230.1 33.658 514 311 9 7 510 2 495 2.05e-86 275
Msa1115900 AT5G44620.1 32.059 471 295 7 49 510 55 509 9.30e-86 274
Msa1115900 AT5G24960.1 33.817 482 297 8 35 509 28 494 1.07e-85 273
Msa1115900 AT3G26170.1 32.941 510 315 10 14 510 4 499 1.10e-85 273
Msa1115900 AT5G25180.1 30.799 513 322 11 8 510 2 491 1.15e-85 273
Msa1115900 AT4G37410.1 32.800 500 308 10 13 505 4 482 2.23e-85 273
Msa1115900 AT1G13090.2 33.700 454 279 8 36 481 24 463 4.22e-85 271
Msa1115900 AT5G25120.1 32.290 511 312 11 12 510 3 491 4.86e-85 271
Msa1115900 AT3G61040.1 34.711 484 283 12 39 510 32 494 5.24e-85 271
Msa1115900 AT5G42590.1 33.074 514 312 9 8 512 7 497 7.10e-85 271
Msa1115900 AT3G26180.1 32.990 485 302 8 37 510 27 499 8.12e-85 271
Msa1115900 AT2G45560.1 32.239 518 314 14 9 510 9 505 1.17e-84 271
Msa1115900 AT4G31970.1 32.946 516 313 11 12 505 5 509 1.62e-84 271
Msa1115900 AT2G45550.1 32.558 516 315 13 9 510 9 505 2.10e-84 270
Msa1115900 AT5G25140.1 32.887 523 299 11 7 510 2 491 2.33e-84 270
Msa1115900 AT3G48270.1 33.534 498 298 10 12 502 3 474 2.49e-84 270
Msa1115900 AT1G33720.1 32.008 528 302 14 9 510 9 505 4.20e-84 270
Msa1115900 AT4G37430.1 34.241 514 299 17 12 509 1 491 5.69e-84 269
Msa1115900 AT3G26320.1 32.225 481 302 10 39 510 30 495 8.44e-84 268
Msa1115900 AT4G22710.1 31.770 469 298 9 49 510 62 515 1.05e-83 269
Msa1115900 AT5G36220.1 32.347 507 306 11 8 505 9 487 1.28e-83 268
Msa1115900 AT4G36220.1 31.198 484 296 7 48 511 48 514 2.94e-83 268
Msa1115900 AT4G37340.1 34.888 493 282 12 12 494 7 470 5.85e-83 266
Msa1115900 AT4G22690.1 31.557 469 299 9 49 510 93 546 1.12e-82 267
Msa1115900 AT4G31940.1 32.495 517 315 11 12 505 5 510 2.51e-82 265
Msa1115900 AT3G26210.1 33.758 471 289 8 49 509 40 497 2.93e-82 265
Msa1115900 AT3G48310.1 33.111 450 277 8 37 483 29 457 5.40e-82 263
Msa1115900 AT3G48290.1 32.427 478 291 9 29 503 23 471 1.91e-81 262
Msa1115900 AT4G37320.1 33.066 499 302 10 15 505 7 481 4.55e-81 261
Msa1115900 AT3G25180.1 32.617 512 319 11 1 504 1 494 5.45e-81 261
Msa1115900 AT3G26190.1 31.781 494 297 9 36 510 24 496 1.16e-80 260
Msa1115900 AT3G26290.1 31.781 494 305 12 29 510 22 495 1.87e-80 260
Msa1115900 AT3G26290.2 31.846 493 306 11 29 510 35 508 2.36e-80 260
Msa1115900 AT3G20935.1 40.588 340 171 9 194 510 1 332 6.07e-80 254
Msa1115900 AT2G45580.1 33.612 479 280 9 50 510 48 506 6.39e-80 259
Msa1115900 AT3G26270.1 32.645 484 306 8 35 510 27 498 1.23e-79 258
Msa1115900 AT3G26150.1 32.157 510 313 13 15 510 9 499 1.60e-79 257
Msa1115900 AT3G48320.1 33.333 474 287 10 15 483 8 457 1.92e-79 257
Msa1115900 AT4G37360.1 32.283 508 307 13 6 505 3 481 2.57e-79 257
Msa1115900 AT5G57220.1 33.740 492 292 13 12 498 7 469 3.05e-79 256
Msa1115900 AT4G13770.1 31.855 496 285 12 16 490 11 474 4.82e-79 256
Msa1115900 AT4G37400.1 33.045 463 284 10 49 505 40 482 1.17e-78 255
Msa1115900 AT4G37310.1 34.091 484 290 11 41 512 31 497 1.66e-78 255
Msa1115900 AT2G40890.1 31.213 503 316 13 15 505 4 488 5.15e-78 254
Msa1115900 AT4G12330.1 30.786 471 300 9 49 510 55 508 6.16e-78 254
Msa1115900 AT3G26220.1 31.456 515 320 10 8 510 5 498 6.64e-78 253
Msa1115900 AT5G10610.1 32.417 509 312 15 8 509 4 487 6.83e-78 253
Msa1115900 AT3G44250.1 34.151 489 283 10 36 506 24 491 2.56e-77 251
Msa1115900 AT3G26160.1 31.950 482 303 8 41 510 31 499 3.87e-77 251
Msa1115900 AT3G53280.1 33.195 482 278 12 36 497 24 481 2.88e-76 249
Msa1115900 AT4G13310.2 37.968 374 220 7 29 397 23 389 5.49e-76 245
Msa1115900 AT5G25130.1 32.016 506 312 10 13 510 10 491 5.86e-76 248
Msa1115900 AT3G26200.1 31.174 494 300 9 36 510 24 496 7.20e-76 248
Msa1115900 AT5G04330.1 30.533 488 312 9 38 511 29 503 8.31e-76 248
Msa1115900 AT2G45570.1 33.125 480 283 12 49 510 47 506 8.31e-76 248
Msa1115900 AT1G13100.1 31.478 467 295 10 50 506 38 489 1.26e-75 247
Msa1115900 AT3G48290.2 30.754 504 291 10 29 503 23 497 1.53e-75 247
Msa1115900 AT3G28740.1 33.404 470 272 12 37 493 36 477 1.58e-75 247
Msa1115900 AT2G02580.1 30.948 517 322 14 6 510 2 495 4.08e-75 246
Msa1115900 AT1G01280.1 31.361 507 321 10 12 505 4 496 4.72e-75 246
Msa1115900 AT4G12310.1 30.638 470 306 8 49 510 53 510 7.54e-75 246
Msa1115900 AT3G26830.1 31.027 477 307 6 10 481 4 463 2.66e-74 243
Msa1115900 AT2G25160.1 31.008 516 320 15 12 505 4 505 2.07e-73 242
Msa1115900 AT2G23190.1 32.625 518 304 14 3 507 42 527 5.63e-73 241
Msa1115900 AT1G66540.1 33.929 392 230 8 123 507 1 370 3.93e-72 234
Msa1115900 AT4G20240.1 36.160 401 238 7 29 422 24 413 1.24e-71 235
Msa1115900 AT5G10600.1 31.393 481 304 11 39 512 45 506 7.93e-71 235
Msa1115900 AT4G31950.1 30.116 518 314 12 12 505 5 498 7.06e-70 232
Msa1115900 AT1G74550.1 31.546 485 271 16 41 508 28 468 9.95e-70 231
Msa1115900 AT2G23220.1 32.479 468 287 12 36 496 42 487 3.70e-69 231
Msa1115900 AT1G74540.1 28.994 507 323 11 8 505 1 479 5.41e-68 227
Msa1115900 AT3G53300.1 30.328 488 306 8 39 510 27 496 3.39e-66 222
Msa1115900 AT4G20240.2 36.220 381 224 7 29 403 24 391 3.50e-64 214
Msa1115900 AT3G52970.1 28.381 525 324 15 12 510 13 511 1.15e-63 216
Msa1115900 AT3G52970.2 26.952 538 329 14 12 510 13 525 6.87e-63 214
Msa1115900 AT2G45580.2 40.141 284 147 5 237 510 82 352 7.66e-63 209
Msa1115900 AT5G35715.1 30.752 452 275 10 77 510 3 434 1.31e-62 211
Msa1115900 AT1G66540.2 35.562 329 186 7 183 507 5 311 1.69e-62 207
Msa1115900 AT1G33720.4 31.250 400 223 11 135 510 2 373 7.12e-61 205
Msa1115900 AT1G33720.3 31.250 400 223 11 135 510 2 373 7.12e-61 205
Msa1115900 AT1G33720.5 31.250 400 223 11 135 510 2 373 7.12e-61 205
Msa1115900 AT2G46660.1 28.992 476 300 12 42 505 72 521 1.30e-60 208
Msa1115900 AT3G61880.1 29.979 477 303 12 42 507 68 524 2.81e-60 207
Msa1115900 AT1G33730.1 31.854 383 231 9 138 507 1 366 4.45e-60 202
Msa1115900 AT1G33730.2 31.854 383 231 9 138 507 1 366 4.45e-60 202
Msa1115900 AT3G61880.2 29.979 477 303 12 42 507 68 524 6.99e-60 207
Msa1115900 AT5G36220.2 34.311 341 201 7 167 505 22 341 6.33e-59 199
Msa1115900 AT1G13710.1 29.677 465 295 11 54 510 70 510 6.56e-59 203
Msa1115900 AT5G24960.2 33.967 368 236 5 35 399 28 391 8.69e-59 200
Msa1115900 AT1G13080.2 32.391 389 230 12 142 513 12 384 2.76e-57 196
Msa1115900 AT5G05260.2 28.008 532 341 17 12 515 7 524 1.92e-56 197
Msa1115900 AT3G10560.1 28.713 505 332 14 12 505 18 505 3.02e-56 196
Msa1115900 AT1G01190.2 29.228 479 297 15 42 506 80 530 2.77e-55 194
Msa1115900 AT1G33720.2 29.551 423 225 12 135 510 2 398 2.87e-55 191
Msa1115900 AT1G01190.1 29.228 479 297 15 42 506 75 525 3.36e-55 194
Msa1115900 AT5G09970.1 29.209 493 301 16 42 513 71 536 2.09e-54 192
Msa1115900 AT4G39950.1 28.958 518 331 17 10 506 24 525 2.13e-54 192
Msa1115900 AT4G39950.2 28.958 518 331 17 10 506 64 565 5.01e-54 192
Msa1115900 AT2G22330.1 28.240 517 337 17 10 506 25 527 6.70e-54 191
Msa1115900 AT5G05260.1 28.736 522 318 17 12 515 7 492 9.56e-54 189
Msa1115900 AT2G22330.2 28.240 517 337 17 10 506 48 550 1.25e-53 190
Msa1115900 AT1G74110.1 28.166 529 331 17 8 510 29 534 1.35e-53 189
Msa1115900 AT5G04630.1 28.101 516 327 17 9 505 11 501 2.49e-53 188
Msa1115900 AT1G79370.1 28.125 544 336 16 7 515 8 531 1.29e-52 187
Msa1115900 AT3G61040.2 32.258 372 233 9 39 401 32 393 1.60e-52 183
Msa1115900 AT1G64940.1 28.625 531 320 14 12 510 3 506 7.70e-51 181
Msa1115900 AT3G26180.2 37.121 264 138 6 254 510 123 365 9.80e-51 177
Msa1115900 AT3G26180.2 39.189 74 45 0 37 110 27 100 1.51e-11 66.6
Msa1115900 AT2G25160.2 31.552 393 250 12 12 387 4 394 5.77e-50 177
Msa1115900 AT2G45580.3 31.507 365 222 8 50 397 48 401 2.57e-48 172
Msa1115900 AT1G58260.1 27.068 532 324 15 14 507 9 514 1.98e-47 172
Msa1115900 AT3G25180.2 29.899 398 268 8 1 390 1 395 2.41e-47 169
Msa1115900 AT2G30490.1 29.372 446 282 13 68 498 62 489 3.25e-47 171
Msa1115900 AT5G04660.1 28.132 455 294 15 65 505 69 504 5.08e-47 171
Msa1115900 AT1G64930.1 26.923 494 329 11 35 510 27 506 2.23e-45 167
Msa1115900 AT3G10570.1 26.872 454 296 16 67 505 73 505 8.41e-44 162
Msa1115900 AT1G16410.1 25.145 517 359 12 9 505 12 520 1.58e-43 162
Msa1115900 AT1G64950.1 28.261 506 306 13 35 510 27 505 2.23e-43 161
Msa1115900 AT2G12190.1 27.668 506 311 13 35 510 27 507 3.71e-42 158
Msa1115900 AT1G16400.1 26.046 526 349 14 7 506 9 520 4.69e-41 155
Msa1115900 AT1G11600.1 25.341 513 348 13 12 505 6 502 3.13e-38 147
Msa1115900 AT3G53290.1 28.538 431 257 10 93 510 11 403 2.63e-35 137
Msa1115900 AT3G03470.1 25.048 523 340 13 6 503 4 499 4.82e-35 138
Msa1115900 AT5G25900.1 24.385 488 324 12 24 492 27 488 2.55e-34 135
Msa1115900 AT5G61320.1 25.164 457 305 10 64 511 58 486 1.17e-33 134
Msa1115900 AT1G13090.1 30.502 259 174 3 36 291 24 279 1.19e-33 129
Msa1115900 AT1G64900.1 27.733 494 303 13 47 512 38 505 2.12e-32 130
Msa1115900 AT1G16410.2 23.573 403 288 8 9 392 12 413 1.04e-28 118
Msa1115900 AT5G35917.1 23.647 499 301 16 41 515 43 485 1.35e-28 119
Msa1115900 AT3G53130.1 24.444 450 290 18 69 497 106 526 1.42e-26 113
Msa1115900 AT2G26170.1 22.747 466 308 13 42 479 47 488 1.47e-24 107
Msa1115900 AT1G24540.1 23.982 442 279 13 79 489 84 499 1.78e-24 107
Msa1115900 AT5G52400.1 28.626 262 167 7 252 510 275 519 9.01e-24 105
Msa1115900 AT4G39510.1 24.138 348 221 11 170 494 162 489 8.56e-23 102
Msa1115900 AT1G31800.1 21.946 442 306 12 71 497 139 556 1.50e-22 101
Msa1115900 AT1G13140.1 23.611 432 282 11 79 483 87 497 2.55e-22 100
Msa1115900 AT4G32170.1 23.614 415 276 13 95 489 89 482 3.51e-22 100
Msa1115900 AT2G45560.2 26.000 300 200 11 9 295 9 299 4.83e-22 97.4
Msa1115900 AT4G15110.1 27.559 254 159 7 265 499 320 567 6.37e-22 99.8
Msa1115900 AT3G26125.1 23.935 493 289 17 44 483 46 505 1.09e-21 99.0
Msa1115900 AT1G57750.1 22.330 515 330 18 6 490 2 476 2.06e-21 97.8
Msa1115900 AT1G19630.1 26.250 240 156 4 251 487 231 452 5.76e-21 96.3
Msa1115900 AT4G20235.1 28.794 257 148 7 13 264 8 234 1.28e-20 93.6
Msa1115900 AT1G13150.1 24.941 421 256 13 96 483 97 490 2.72e-20 94.4
Msa1115900 AT1G47620.1 24.088 274 184 7 234 494 237 499 3.01e-20 94.4
Msa1115900 AT3G19270.2 21.429 490 332 11 6 488 2 445 4.96e-20 93.2
Msa1115900 AT4G39490.1 21.805 532 330 19 8 490 2 496 5.94e-20 93.6
Msa1115900 AT2G45560.3 29.082 196 130 6 9 198 9 201 9.09e-20 89.0
Msa1115900 AT5G24900.1 22.323 439 306 14 54 479 80 496 1.99e-19 91.7
Msa1115900 AT1G19630.3 26.068 234 152 4 251 481 231 446 3.78e-19 90.5
Msa1115900 AT1G65340.1 25.000 260 172 7 241 490 237 483 7.60e-19 89.7
Msa1115900 AT5G52320.2 24.903 257 171 7 241 488 237 480 1.89e-18 88.6
Msa1115900 AT1G13140.2 23.653 427 262 13 79 483 87 471 2.11e-18 88.6
Msa1115900 AT5G52320.1 24.903 257 171 7 241 488 237 480 2.36e-18 88.6
Msa1115900 AT5G08250.2 24.024 333 210 10 188 490 201 520 2.42e-18 88.6
Msa1115900 AT5G08250.1 24.024 333 210 10 188 490 139 458 3.44e-18 87.8
Msa1115900 AT2G26170.2 25.106 235 158 5 247 479 187 405 3.48e-18 87.4
Msa1115900 AT4G19230.1 22.133 497 314 15 4 486 2 439 3.67e-18 87.4
Msa1115900 AT2G44890.1 23.483 511 326 19 1 483 7 480 5.04e-18 87.4
Msa1115900 AT2G26710.1 29.091 220 134 5 267 479 280 484 5.49e-18 87.4
Msa1115900 AT2G29090.2 22.609 460 304 12 37 488 46 461 7.51e-18 86.7
Msa1115900 AT2G29090.1 22.609 460 304 12 37 488 46 461 7.51e-18 86.7
Msa1115900 AT5G02900.1 24.528 265 172 7 240 488 204 456 1.61e-17 85.9
Msa1115900 AT4G39500.2 21.773 519 319 17 12 489 23 495 1.74e-17 85.9
Msa1115900 AT1G55940.1 23.374 492 306 17 13 479 18 463 2.12e-17 85.1
Msa1115900 AT2G23180.1 24.468 282 179 8 229 490 225 492 3.19e-17 85.1
Msa1115900 AT4G39500.1 23.693 287 185 7 218 489 178 445 3.73e-17 84.3
Msa1115900 AT1G55940.2 22.984 496 311 17 13 483 18 467 4.88e-17 84.3
Msa1115900 AT3G53305.1 31.818 154 85 4 352 501 183 320 8.23e-17 82.0
Msa1115900 AT3G14610.1 23.780 328 223 9 166 483 175 485 1.50e-16 82.8
Msa1115900 AT3G14620.1 22.910 323 224 9 165 483 187 488 1.58e-16 82.8
Msa1115900 AT5G24900.2 23.324 373 252 13 120 479 28 379 1.76e-16 82.0
Msa1115900 AT1G19630.2 27.933 179 124 2 251 426 231 407 1.83e-16 82.0
Msa1115900 AT2G45510.1 21.961 510 335 16 1 483 7 480 2.54e-16 82.0
Msa1115900 AT3G14630.1 24.847 326 217 10 168 483 174 481 2.99e-16 82.0
Msa1115900 AT3G14630.2 24.847 326 217 10 168 483 229 536 3.89e-16 81.6
Msa1115900 AT2G45970.1 21.712 479 329 14 44 492 30 492 6.93e-16 80.9
Msa1115900 AT4G39480.1 23.656 279 185 6 229 489 224 492 7.70e-16 80.5
Msa1115900 AT1G57750.2 22.030 463 301 17 6 438 2 434 8.66e-16 80.1
Msa1115900 AT5G23190.1 21.818 330 218 9 188 490 204 520 1.48e-15 79.7
Msa1115900 AT4G00360.1 22.199 482 324 17 44 492 30 493 1.53e-15 79.7
Msa1115900 AT1G05160.2 21.681 452 288 17 34 464 39 445 1.53e-15 79.7
Msa1115900 AT1G05160.1 21.681 452 288 17 34 464 39 445 1.53e-15 79.7
Msa1115900 AT1G11680.1 27.848 237 151 7 254 483 235 458 1.98e-15 79.3
Msa1115900 AT2G21910.1 25.735 272 182 9 230 490 224 486 2.08e-15 79.3
Msa1115900 AT3G14680.1 22.515 342 231 8 151 483 169 485 2.47e-15 79.0
Msa1115900 AT2G29090.3 24.121 199 131 2 294 488 184 366 2.61e-15 78.2
Msa1115900 AT3G50660.1 27.706 231 149 4 263 488 275 492 4.26e-15 78.2
Msa1115900 AT1G01600.1 22.581 434 288 15 86 492 83 495 5.75e-15 78.2
Msa1115900 AT5G35920.1 31.944 144 86 4 364 505 7 140 1.07e-14 72.0
Msa1115900 AT3G01900.1 22.877 424 290 15 79 490 72 470 1.10e-14 77.0
Msa1115900 AT3G48520.1 20.080 498 336 17 10 480 7 469 1.16e-14 77.0
Msa1115900 AT5G38450.1 23.043 447 297 15 53 483 74 489 1.19e-14 77.0
Msa1115900 AT5G38970.1 20.961 458 307 14 41 489 35 446 6.18e-14 74.3
Msa1115900 AT3G44970.1 21.548 478 296 11 32 483 27 451 6.41e-14 74.3
Msa1115900 AT3G14640.2 21.184 321 220 10 172 483 213 509 1.60e-13 73.6
Msa1115900 AT3G14640.1 21.184 321 220 10 172 483 191 487 1.63e-13 73.2
Msa1115900 AT5G38970.2 23.571 280 187 7 214 489 109 365 1.28e-12 70.1
Msa1115900 AT5G38970.4 23.571 280 187 7 214 489 109 365 1.28e-12 70.1
Msa1115900 AT1G34540.1 20.724 497 354 15 12 491 5 478 1.71e-12 70.1
Msa1115900 AT5G05690.1 24.885 217 142 3 276 489 251 449 2.79e-12 69.3
Msa1115900 AT3G13730.1 21.656 471 312 11 26 481 37 465 6.36e-12 68.2
Msa1115900 AT5G05690.3 24.885 217 142 3 276 489 132 330 7.32e-12 67.4
Msa1115900 AT5G63450.1 20.121 497 344 16 7 480 6 472 1.42e-11 67.4
Msa1115900 AT5G63450.2 20.121 497 344 16 7 480 64 530 1.61e-11 67.0
Msa1115900 AT2G42850.1 24.747 198 130 2 294 488 281 462 2.65e-11 66.2
Msa1115900 AT2G46950.1 21.074 242 179 4 270 510 340 570 7.61e-11 65.1

Find 126 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAAAATATTGAAGAAATTA+AGG 0.185152 7_3:+63421437 Msa1115900:CDS
TGAAAATAGGTCAACGGATT+TGG 0.216042 7_3:+63419771 Msa1115900:CDS
CTGCCCCATATGGTCCTTAT+TGG 0.241258 7_3:+63419629 Msa1115900:CDS
CACTAATCACAAACTTAAAA+AGG 0.243433 7_3:-63421994 None:intergenic
AAGTTTGACTTGTTTGGTTA+TGG 0.248962 7_3:+63419961 Msa1115900:CDS
TTTAGCTACCGACCCCAATT+TGG 0.275371 7_3:+63419565 Msa1115900:CDS
CATTTCTATACACTTCTAAT+AGG 0.278853 7_3:-63420095 None:intergenic
CCAAGATTGAGCTGAATTAA+AGG 0.279817 7_3:-63419472 None:intergenic
GAAAGTGTTTGGAATGATTT+TGG 0.284585 7_3:-63419436 None:intergenic
CCTATTATGGGTAGTGATCT+TGG 0.293616 7_3:-63419385 None:intergenic
AAAGGATTAAAACAAGTAAC+AGG 0.296432 7_3:-63421976 None:intergenic
TCATGAACATGTGAATAAAA+TGG 0.305008 7_3:+63421753 Msa1115900:CDS
GGTGAAGTACTTGGACCTTT+GGG 0.307951 7_3:+63419937 Msa1115900:CDS
CATACGACACAAGATGTTAT+TGG 0.309712 7_3:-63419815 None:intergenic
TTGGGGAAGTTTGACTTGTT+TGG 0.311734 7_3:+63419955 Msa1115900:CDS
AATCATGAGAGGATCCAAAT+TGG 0.315692 7_3:-63419579 None:intergenic
GAAAATAGGTCAACGGATTT+GGG 0.321356 7_3:+63419772 Msa1115900:CDS
AGGTGGTGATAAGGTTGATA+TGG 0.338752 7_3:+63421903 Msa1115900:CDS
CCTTTAATTCAGCTCAATCT+TGG 0.340291 7_3:+63419472 Msa1115900:CDS
TCCTAAGGTTATTCAATGTT+TGG 0.342500 7_3:+63419876 Msa1115900:CDS
CATATTGGTGAGAAAGTGTT+TGG 0.349270 7_3:-63419447 None:intergenic
ATGGTGAAGGTGGCCTATTA+TGG 0.349927 7_3:-63419398 None:intergenic
CCAAGATCACTACCCATAAT+AGG 0.356020 7_3:+63419385 Msa1115900:CDS
AGTTTGACTTGTTTGGTTAT+GGG 0.364559 7_3:+63419962 Msa1115900:CDS
GGTAGTGATCTTGGGCATGG+TGG 0.364631 7_3:-63419376 None:intergenic
AGTGATCTTGGGCATGGTGG+GGG 0.366933 7_3:-63419373 None:intergenic
AATTAAGCCATGGCATTTGA+TGG 0.368244 7_3:+63419247 None:intergenic
AGGTTATTCAATGTTTGGTT+CGG 0.368801 7_3:+63419881 Msa1115900:CDS
GGTTATTCAATGTTTGGTTC+GGG 0.369624 7_3:+63419882 Msa1115900:CDS
TTCACACATGCTTGTAAGTA+AGG 0.376385 7_3:-63421523 None:intergenic
GGGTGAAGTACTTGGACCTT+TGG 0.381309 7_3:+63419936 Msa1115900:CDS
TAGGTCAACGGATTTGGGTT+TGG 0.382700 7_3:+63419777 Msa1115900:CDS
TGTAGGAGCTAAATTGAGTA+TGG 0.388977 7_3:+63419915 Msa1115900:CDS
CTCTCAGGTATATACTCCTC+AGG 0.389071 7_3:-63421694 None:intergenic
CAAACACTTTCTCACCAATA+TGG 0.390068 7_3:+63419448 Msa1115900:CDS
AGGTATATTCCATTTGGATT+TGG 0.394894 7_3:+63421790 Msa1115900:CDS
TAGTGATCTTGGGCATGGTG+GGG 0.399744 7_3:-63419374 None:intergenic
TGGTTCATCACTTGCTTTGA+CGG 0.400813 7_3:+63421828 Msa1115900:CDS
TCAATGTATATGCCATTATG+AGG 0.403164 7_3:+63421650 Msa1115900:CDS
TTTGGTAGGAGGGGTTGTCC+TGG 0.406350 7_3:+63421808 Msa1115900:CDS
ATCATGAGAGGATCCAAATT+GGG 0.408310 7_3:-63419578 None:intergenic
TGGTATGCTCAAGTGAAAAT+AGG 0.410603 7_3:+63419758 Msa1115900:CDS
GCTGAATTAAAGGACCATAT+TGG 0.415830 7_3:-63419462 None:intergenic
AATCTCCAATAAGGACCATA+TGG 0.416657 7_3:-63419634 None:intergenic
AAATTTGGAGCTACCATTTG+TGG 0.416710 7_3:-63419347 None:intergenic
AACAATAAACGAACCACAAA+TGG 0.419404 7_3:+63419334 Msa1115900:CDS
TATTTCATCACTGCCCCATA+TGG 0.421612 7_3:+63419619 Msa1115900:CDS
CTATTATGGGTAGTGATCTT+GGG 0.423625 7_3:-63419384 None:intergenic
GAAAATTAAAGGTGGTGATA+AGG 0.426987 7_3:+63421894 Msa1115900:CDS
TAAAATATTGAAGAAATTAA+GGG 0.431095 7_3:+63421438 Msa1115900:CDS
GTAGTGATCTTGGGCATGGT+GGG 0.436094 7_3:-63419375 None:intergenic
GATAAGGTTGATATGGAAGA+AGG 0.439862 7_3:+63421910 Msa1115900:CDS
TGATTGTGGGTCCCTCATAA+TGG 0.442953 7_3:-63421662 None:intergenic
TGGTGAAGGTGGCCTATTAT+GGG 0.444457 7_3:-63419397 None:intergenic
AAAATACAATATTGATCCTA+AGG 0.459383 7_3:+63419861 Msa1115900:CDS
CCATTTGGATTTGGTAGGAG+GGG 0.464464 7_3:+63421799 Msa1115900:CDS
TTGGTATCACTGAGCCTAGA+TGG 0.464599 7_3:-63419417 None:intergenic
CAGGGTTGACCCATGATTGT+GGG 0.465449 7_3:-63421675 None:intergenic
TTCCATTTGGATTTGGTAGG+AGG 0.468830 7_3:+63421797 Msa1115900:CDS
TTGAGTATGGGTGAAGTACT+TGG 0.473438 7_3:+63419928 Msa1115900:CDS
TCTCATGATTACTTATACGA+AGG 0.475222 7_3:+63419592 Msa1115900:CDS
TCAGGGTTGACCCATGATTG+TGG 0.475241 7_3:-63421676 None:intergenic
GCTGAGATTAATGATGTAGT+AGG 0.489241 7_3:+63421460 Msa1115900:CDS
ATGATATAAAAGCTCATACT+AGG 0.495460 7_3:+63421620 Msa1115900:CDS
ATAGGCCACCTTCACCATCT+AGG 0.500250 7_3:+63419403 Msa1115900:CDS
CCCCTCCTACCAAATCCAAA+TGG 0.508366 7_3:-63421799 None:intergenic
ATCTCCAATAAGGACCATAT+GGG 0.511571 7_3:-63419633 None:intergenic
GTTAACAAGGAATGATATCA+AGG 0.514730 7_3:+63420134 Msa1115900:CDS
AGATTCTTAGTAGGTGGTGA+TGG 0.516873 7_3:+63421715 Msa1115900:CDS
TGTAGTAGGCACTAATAGAT+TGG 0.517408 7_3:+63421474 Msa1115900:CDS
CATCTTGTGTCGTATGAGCA+TGG 0.525390 7_3:+63419822 Msa1115900:CDS
ACCAAACATTGAATAACCTT+AGG 0.527007 7_3:-63419877 None:intergenic
TTATGAGGGACCCACAATCA+TGG 0.529117 7_3:+63421665 Msa1115900:CDS
TCCATTTGGATTTGGTAGGA+GGG 0.530076 7_3:+63421798 Msa1115900:CDS
ATAAGGTTGATATGGAAGAA+GGG 0.540089 7_3:+63421911 Msa1115900:CDS
CCACCTACTAAGAATCTCTC+AGG 0.542179 7_3:-63421709 None:intergenic
TTGTTTGGCAACTTGTGCAT+TGG 0.552346 7_3:-63419518 None:intergenic
AATTAGCAAAGCTAGAAGAA+AGG 0.552897 7_3:-63419296 None:intergenic
CTAAGAGCAAACGGTGCCGT+TGG 0.554911 7_3:-63421565 None:intergenic
GATGATTGTCTAAGAGCAAA+CGG 0.556939 7_3:-63421574 None:intergenic
GGATTGTCAAGGAGACATGA+TGG 0.559468 7_3:+63420068 Msa1115900:CDS
GGGGTCGGTAGCTAAAATTA+AGG 0.561906 7_3:-63419558 None:intergenic
TATGAGGGACCCACAATCAT+GGG 0.565994 7_3:+63421666 Msa1115900:CDS
GTTCGGGAGTTTATGCATGT+AGG 0.568378 7_3:+63419898 Msa1115900:CDS
ATGGGTAGTGATCTTGGGCA+TGG 0.568379 7_3:-63419379 None:intergenic
ATCTTGTGTCGTATGAGCAT+GGG 0.573586 7_3:+63419823 Msa1115900:CDS
AAGATGTGTCTGTTCCAGCC+AGG 0.575339 7_3:-63421372 None:intergenic
CATCTTCAGTGGCAATGCAA+TGG 0.581349 7_3:+63421389 Msa1115900:CDS
TTACTATCTAGCTCTCAACT+TGG 0.583489 7_3:+63419682 Msa1115900:CDS
CTCAAGTGAAAATAGGTCAA+CGG 0.584779 7_3:+63419765 Msa1115900:CDS
ATACCTGAGAGATTCTTAGT+AGG 0.590448 7_3:+63421706 Msa1115900:CDS
ATATTCCATTTGGATTTGGT+AGG 0.597017 7_3:+63421794 Msa1115900:CDS
CCTGAGAGATTCTTAGTAGG+TGG 0.603238 7_3:+63421709 Msa1115900:CDS
CTCATGATTACTTATACGAA+GGG 0.604652 7_3:+63419593 Msa1115900:CDS
GTGAAGTACTTGGACCTTTG+GGG 0.605990 7_3:+63419938 Msa1115900:CDS
GTAGGAGCTAAATTGAGTAT+GGG 0.608545 7_3:+63419916 Msa1115900:CDS
TCAGAAGATTGCAAAATCAA+CGG 0.609204 7_3:+63421595 Msa1115900:CDS
GGAGACAACTATAGAAGTTG+AGG 0.613036 7_3:-63419497 None:intergenic
GAAACTCTTGAAGTCTCTTG+TGG 0.614657 7_3:+63419738 Msa1115900:CDS
CTGAGCCTAGATGGTGAAGG+TGG 0.618404 7_3:-63419408 None:intergenic
CAATGTATATGCCATTATGA+GGG 0.619616 7_3:+63421651 Msa1115900:CDS
TTCGTATAAGTAATCATGAG+AGG 0.622233 7_3:-63419590 None:intergenic
TTTGAATGGAAAATTAAAGG+TGG 0.628843 7_3:+63421886 Msa1115900:CDS
ACGCTGAAGTGAAGTTAACA+AGG 0.630120 7_3:+63420121 Msa1115900:CDS
AGTAGCACCATCAAATGCCA+TGG 0.633777 7_3:-63419254 None:intergenic
TCTCAGGTATATACTCCTCA+GGG 0.634062 7_3:-63421693 None:intergenic
TGGAACAGACACATCTTCAG+TGG 0.634287 7_3:+63421378 Msa1115900:CDS
ATAAACACTGAGGATTGTCA+AGG 0.637019 7_3:+63420057 Msa1115900:CDS
GAGAGGATCCAAATTGGGGT+CGG 0.638201 7_3:-63419573 None:intergenic
AACAAGTCAAACTTCCCCAA+AGG 0.643630 7_3:-63419952 None:intergenic
TCATGAGAGGATCCAAATTG+GGG 0.645695 7_3:-63419577 None:intergenic
GTAGGTGGTGATGGAATCAA+CGG 0.647370 7_3:+63421724 Msa1115900:CDS
GAACATGTGAATAAAATGGA+TGG 0.648950 7_3:+63421757 Msa1115900:CDS
TCTCCAATAAGGACCATATG+GGG 0.649972 7_3:-63419632 None:intergenic
AGTGGCAATGCAATGGACAA+TGG 0.653556 7_3:+63421396 Msa1115900:CDS
TTACTTACAAGCATGTGTGA+AGG 0.655939 7_3:+63421525 Msa1115900:CDS
AATGCAATGGACAATGGCTG+AGG 0.660717 7_3:+63421402 Msa1115900:CDS
TCACTGAGCCTAGATGGTGA+AGG 0.674047 7_3:-63419411 None:intergenic
AAAAGCTTACGAAAATAGTG+GGG 0.680770 7_3:+63419986 Msa1115900:CDS
AAAGCTTACGAAAATAGTGG+GGG 0.683296 7_3:+63419987 Msa1115900:CDS
AAGGATTAAAACAAGTAACA+GGG 0.684426 7_3:-63421975 None:intergenic
GTAACAGGGTAACAAACTAG+AGG 0.685383 7_3:-63421961 None:intergenic
GTCAAAGCAAGTGATGAACC+AGG 0.687036 7_3:-63421826 None:intergenic
AGTGCTAAGACTTCATCCAA+CGG 0.717609 7_3:+63421549 Msa1115900:CDS
ACAATCATGGGTCAACCCTG+AGG 0.735291 7_3:+63421678 Msa1115900:CDS
TGAAGAGAGAATAAACACTG+AGG 0.766168 7_3:+63420047 Msa1115900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTCTTAAGAATTTTTTTTA+AGG + chr7_3:63420740-63420759 Msa1115900:intron 10.0%
!!! TTCTTAAGAATTTTTTTTAA+GGG + chr7_3:63420741-63420760 Msa1115900:intron 10.0%
!!! TTAATTTCTTCAATATTTTA+GGG - chr7_3:63421438-63421457 None:intergenic 10.0%
!! TAAAATATTGAAGAAATTAA+GGG + chr7_3:63421438-63421457 Msa1115900:CDS 10.0%
!! ACAAAAAATTATTCATTCTA+TGG - chr7_3:63420246-63420265 None:intergenic 15.0%
!!! AGAATGAATAATTTTTTGTT+TGG + chr7_3:63420247-63420266 Msa1115900:intron 15.0%
!!! ATCTTTCATTTATTTTTCTT+TGG - chr7_3:63420419-63420438 None:intergenic 15.0%
!!! ATTTTTTTTTTTTTTTGCGT+GGG - chr7_3:63420471-63420490 None:intergenic 15.0%
!!! AAATGTTTTTAATAGGTTTA+TGG + chr7_3:63420515-63420534 Msa1115900:intron 15.0%
!! TATGTCTATATTTAGTATTA+CGG + chr7_3:63420792-63420811 Msa1115900:intron 15.0%
!! CTTATAAAAAAAAAGTGATT+TGG + chr7_3:63421088-63421107 Msa1115900:intron 15.0%
!!! ATATTTTACTAAAATCACAA+GGG + chr7_3:63421141-63421160 Msa1115900:intron 15.0%
!!! CTTAATTTCTTCAATATTTT+AGG - chr7_3:63421439-63421458 None:intergenic 15.0%
!! CTAAAATATTGAAGAAATTA+AGG + chr7_3:63421437-63421456 Msa1115900:CDS 15.0%
!! AAAATACAATATTGATCCTA+AGG + chr7_3:63419861-63419880 Msa1115900:CDS 20.0%
!!! GATTTTTTTTTTTTTTTGCG+TGG - chr7_3:63420472-63420491 None:intergenic 20.0%
!!! TCTTGCAAAATGTTTTTAAT+AGG + chr7_3:63420508-63420527 Msa1115900:intron 20.0%
!! CTAAAAAGAGTAGATTAATA+TGG + chr7_3:63420584-63420603 Msa1115900:intron 20.0%
!!! TATGATTAAAATTTGTTGAG+AGG + chr7_3:63420714-63420733 Msa1115900:intron 20.0%
!! TTATTTAATCCTTCATGATT+TGG - chr7_3:63420881-63420900 None:intergenic 20.0%
!! TACATAATGTAAAATTGACT+TGG + chr7_3:63421031-63421050 Msa1115900:intron 20.0%
!!! ATTGACTTGGTTAAATTAAA+CGG + chr7_3:63421044-63421063 Msa1115900:intron 20.0%
!! TTTAGTAAAATATGGATGTT+GGG - chr7_3:63421134-63421153 None:intergenic 20.0%
!!! TTTTAGTAAAATATGGATGT+TGG - chr7_3:63421135-63421154 None:intergenic 20.0%
!!! CTTGTGATTTTAGTAAAATA+TGG - chr7_3:63421142-63421161 None:intergenic 20.0%
!!! CATATTTTACTAAAATCACA+AGG + chr7_3:63421140-63421159 Msa1115900:intron 20.0%
!!! TATTTTACTAAAATCACAAG+GGG + chr7_3:63421142-63421161 Msa1115900:intron 20.0%
!!! CTTAGTATATGTTTGAAATT+TGG - chr7_3:63421188-63421207 None:intergenic 20.0%
!!! TGATTTTAATTTAATGACCA+TGG - chr7_3:63421274-63421293 None:intergenic 20.0%
!!! TGTTTTGAATGGAAAATTAA+AGG + chr7_3:63421883-63421902 Msa1115900:CDS 20.0%
!! TTTTTCATGAATCTCCAATA+AGG - chr7_3:63419646-63419665 None:intergenic 25.0%
!!! ATTGTATTTTTGAAAGCATG+TGG - chr7_3:63419851-63419870 None:intergenic 25.0%
! AAAAAGCTTACGAAAATAGT+GGG + chr7_3:63419985-63420004 Msa1115900:CDS 25.0%
! CATTTCTATACACTTCTAAT+AGG - chr7_3:63420098-63420117 None:intergenic 25.0%
! ATCAAGTAAAACAACTTACT+AGG - chr7_3:63420167-63420186 None:intergenic 25.0%
!!! TTTATTTTTCTTTGGTCAAC+AGG - chr7_3:63420411-63420430 None:intergenic 25.0%
! AAAGATGTAGATCATTATGT+AGG + chr7_3:63420433-63420452 Msa1115900:intron 25.0%
!! TTTTTAATAGGTTTATGGTG+CGG + chr7_3:63420520-63420539 Msa1115900:intron 25.0%
! TGAACGGTTTATATATCAAA+TGG - chr7_3:63420674-63420693 None:intergenic 25.0%
! TTTGATATATAAACCGTTCA+CGG + chr7_3:63420674-63420693 Msa1115900:intron 25.0%
! TGGTTAAATTAAACGGAAAA+TGG + chr7_3:63421051-63421070 Msa1115900:intron 25.0%
! ATTAAACGGAAAATGGTTTA+TGG + chr7_3:63421058-63421077 Msa1115900:intron 25.0%
! CATGATGTGATTATTATACT+TGG + chr7_3:63421294-63421313 Msa1115900:intron 25.0%
! ATGATATAAAAGCTCATACT+AGG + chr7_3:63421620-63421639 Msa1115900:CDS 25.0%
! TCATGAACATGTGAATAAAA+TGG + chr7_3:63421753-63421772 Msa1115900:CDS 25.0%
!!! GATTTTAGGTATATTCCATT+TGG + chr7_3:63421784-63421803 Msa1115900:CDS 25.0%
!!! CATTGATTCAATGTTTTGAA+TGG + chr7_3:63421872-63421891 Msa1115900:CDS 25.0%
! TTTGAATGGAAAATTAAAGG+TGG + chr7_3:63421886-63421905 Msa1115900:CDS 25.0%
! AAGGATTAAAACAAGTAACA+GGG - chr7_3:63421978-63421997 None:intergenic 25.0%
! AAAGGATTAAAACAAGTAAC+AGG - chr7_3:63421979-63421998 None:intergenic 25.0%
AATTAGCAAAGCTAGAAGAA+AGG - chr7_3:63419299-63419318 None:intergenic 30.0%
AACAATAAACGAACCACAAA+TGG + chr7_3:63419334-63419353 Msa1115900:CDS 30.0%
!!! GAAAGTGTTTGGAATGATTT+TGG - chr7_3:63419439-63419458 None:intergenic 30.0%
!!! ATGTGTTTTCATGACTTGTT+TGG - chr7_3:63419536-63419555 None:intergenic 30.0%
TTCGTATAAGTAATCATGAG+AGG - chr7_3:63419593-63419612 None:intergenic 30.0%
TCTCATGATTACTTATACGA+AGG + chr7_3:63419592-63419611 Msa1115900:CDS 30.0%
CTCATGATTACTTATACGAA+GGG + chr7_3:63419593-63419612 Msa1115900:CDS 30.0%
TCCTAAGGTTATTCAATGTT+TGG + chr7_3:63419876-63419895 Msa1115900:CDS 30.0%
ACCAAACATTGAATAACCTT+AGG - chr7_3:63419880-63419899 None:intergenic 30.0%
AGGTTATTCAATGTTTGGTT+CGG + chr7_3:63419881-63419900 Msa1115900:CDS 30.0%
!! AAGTTTGACTTGTTTGGTTA+TGG + chr7_3:63419961-63419980 Msa1115900:CDS 30.0%
!! AGTTTGACTTGTTTGGTTAT+GGG + chr7_3:63419962-63419981 Msa1115900:CDS 30.0%
GAAAAAGCTTACGAAAATAG+TGG + chr7_3:63419984-63420003 Msa1115900:CDS 30.0%
AAAAGCTTACGAAAATAGTG+GGG + chr7_3:63419986-63420005 Msa1115900:CDS 30.0%
! GAATTTGACAAGATTTTGGA+AGG + chr7_3:63420009-63420028 Msa1115900:CDS 30.0%
GTTAACAAGGAATGATATCA+AGG + chr7_3:63420134-63420153 Msa1115900:CDS 30.0%
GTCTATATTTAGTATTACGG+TGG + chr7_3:63420795-63420814 Msa1115900:intron 30.0%
AGCTTGATTATGTCTATGTT+TGG + chr7_3:63420916-63420935 Msa1115900:intron 30.0%
AACATATACTAAGCACATCA+TGG + chr7_3:63421195-63421214 Msa1115900:intron 30.0%
ACATATACTAAGCACATCAT+GGG + chr7_3:63421196-63421215 Msa1115900:intron 30.0%
TCAGAAGATTGCAAAATCAA+CGG + chr7_3:63421595-63421614 Msa1115900:CDS 30.0%
TCAATGTATATGCCATTATG+AGG + chr7_3:63421650-63421669 Msa1115900:CDS 30.0%
CAATGTATATGCCATTATGA+GGG + chr7_3:63421651-63421670 Msa1115900:CDS 30.0%
GAACATGTGAATAAAATGGA+TGG + chr7_3:63421757-63421776 Msa1115900:CDS 30.0%
!! AAATGGATGGTGATGATTTT+AGG + chr7_3:63421770-63421789 Msa1115900:CDS 30.0%
AGGTATATTCCATTTGGATT+TGG + chr7_3:63421790-63421809 Msa1115900:CDS 30.0%
! ATATTCCATTTGGATTTGGT+AGG + chr7_3:63421794-63421813 Msa1115900:CDS 30.0%
GAAAATTAAAGGTGGTGATA+AGG + chr7_3:63421894-63421913 Msa1115900:CDS 30.0%
!! ATAAGGTTGATATGGAAGAA+GGG + chr7_3:63421911-63421930 Msa1115900:CDS 30.0%
! AAATTTGGAGCTACCATTTG+TGG - chr7_3:63419350-63419369 None:intergenic 35.0%
CTATTATGGGTAGTGATCTT+GGG - chr7_3:63419387-63419406 None:intergenic 35.0%
!! CATATTGGTGAGAAAGTGTT+TGG - chr7_3:63419450-63419469 None:intergenic 35.0%
CAAACACTTTCTCACCAATA+TGG + chr7_3:63419448-63419467 Msa1115900:CDS 35.0%
GCTGAATTAAAGGACCATAT+TGG - chr7_3:63419465-63419484 None:intergenic 35.0%
CCAAGATTGAGCTGAATTAA+AGG - chr7_3:63419475-63419494 None:intergenic 35.0%
CCTTTAATTCAGCTCAATCT+TGG + chr7_3:63419472-63419491 Msa1115900:CDS 35.0%
ATCATGAGAGGATCCAAATT+GGG - chr7_3:63419581-63419600 None:intergenic 35.0%
AATCATGAGAGGATCCAAAT+TGG - chr7_3:63419582-63419601 None:intergenic 35.0%
ATCTCCAATAAGGACCATAT+GGG - chr7_3:63419636-63419655 None:intergenic 35.0%
AATCTCCAATAAGGACCATA+TGG - chr7_3:63419637-63419656 None:intergenic 35.0%
!! TTACTATCTAGCTCTCAACT+TGG + chr7_3:63419682-63419701 Msa1115900:CDS 35.0%
TGGTATGCTCAAGTGAAAAT+AGG + chr7_3:63419758-63419777 Msa1115900:CDS 35.0%
CTCAAGTGAAAATAGGTCAA+CGG + chr7_3:63419765-63419784 Msa1115900:CDS 35.0%
! TGAAAATAGGTCAACGGATT+TGG + chr7_3:63419771-63419790 Msa1115900:CDS 35.0%
! GAAAATAGGTCAACGGATTT+GGG + chr7_3:63419772-63419791 Msa1115900:CDS 35.0%
CATACGACACAAGATGTTAT+TGG - chr7_3:63419818-63419837 None:intergenic 35.0%
! GGTTATTCAATGTTTGGTTC+GGG + chr7_3:63419882-63419901 Msa1115900:CDS 35.0%
TGTAGGAGCTAAATTGAGTA+TGG + chr7_3:63419915-63419934 Msa1115900:CDS 35.0%
GTAGGAGCTAAATTGAGTAT+GGG + chr7_3:63419916-63419935 Msa1115900:CDS 35.0%
AAAGCTTACGAAAATAGTGG+GGG + chr7_3:63419987-63420006 Msa1115900:CDS 35.0%
!! GATTTTGGAAGGTTTCTTGA+AGG + chr7_3:63420020-63420039 Msa1115900:CDS 35.0%
TGAAGAGAGAATAAACACTG+AGG + chr7_3:63420047-63420066 Msa1115900:CDS 35.0%
ATAAACACTGAGGATTGTCA+AGG + chr7_3:63420057-63420076 Msa1115900:CDS 35.0%
!! TTTTTAGGAGGATTGATGGT+AGG - chr7_3:63420345-63420364 None:intergenic 35.0%
CATCAATCCTCCTAAAAACT+GGG + chr7_3:63420347-63420366 Msa1115900:intron 35.0%
TTTATGGTGCGGATCAAAAT+GGG + chr7_3:63420531-63420550 Msa1115900:intron 35.0%
!! TCTACTCTTTTTAGCGAAGT+GGG - chr7_3:63420578-63420597 None:intergenic 35.0%
!! ATCTACTCTTTTTAGCGAAG+TGG - chr7_3:63420579-63420598 None:intergenic 35.0%
TATGTCTATGTTTGGCATCA+TGG + chr7_3:63420924-63420943 Msa1115900:intron 35.0%
TACCTGTTTATGCAAATGCA+AGG + chr7_3:63421342-63421361 Msa1115900:intron 35.0%
GCTGAGATTAATGATGTAGT+AGG + chr7_3:63421460-63421479 Msa1115900:CDS 35.0%
TGTAGTAGGCACTAATAGAT+TGG + chr7_3:63421474-63421493 Msa1115900:CDS 35.0%
!! GCTTGTAAGTAAGGCATTTT+TGG - chr7_3:63421517-63421536 None:intergenic 35.0%
TTCACACATGCTTGTAAGTA+AGG - chr7_3:63421526-63421545 None:intergenic 35.0%
TTACTTACAAGCATGTGTGA+AGG + chr7_3:63421525-63421544 Msa1115900:CDS 35.0%
GATGATTGTCTAAGAGCAAA+CGG - chr7_3:63421577-63421596 None:intergenic 35.0%
ATACCTGAGAGATTCTTAGT+AGG + chr7_3:63421706-63421725 Msa1115900:CDS 35.0%
!! GATAAGGTTGATATGGAAGA+AGG + chr7_3:63421910-63421929 Msa1115900:CDS 35.0%
CCTATTATGGGTAGTGATCT+TGG - chr7_3:63419388-63419407 None:intergenic 40.0%
CCAAGATCACTACCCATAAT+AGG + chr7_3:63419385-63419404 Msa1115900:CDS 40.0%
GGAGACAACTATAGAAGTTG+AGG - chr7_3:63419500-63419519 None:intergenic 40.0%
TTGTTTGGCAACTTGTGCAT+TGG - chr7_3:63419521-63419540 None:intergenic 40.0%
TCATGAGAGGATCCAAATTG+GGG - chr7_3:63419580-63419599 None:intergenic 40.0%
TATTTCATCACTGCCCCATA+TGG + chr7_3:63419619-63419638 Msa1115900:CDS 40.0%
TCTCCAATAAGGACCATATG+GGG - chr7_3:63419635-63419654 None:intergenic 40.0%
GAAACTCTTGAAGTCTCTTG+TGG + chr7_3:63419738-63419757 Msa1115900:CDS 40.0%
ATCTTGTGTCGTATGAGCAT+GGG + chr7_3:63419823-63419842 Msa1115900:CDS 40.0%
! TTGAGTATGGGTGAAGTACT+TGG + chr7_3:63419928-63419947 Msa1115900:CDS 40.0%
AACAAGTCAAACTTCCCCAA+AGG - chr7_3:63419955-63419974 None:intergenic 40.0%
!! TTGGGGAAGTTTGACTTGTT+TGG + chr7_3:63419955-63419974 Msa1115900:CDS 40.0%
! GGGGGAATTTGACAAGATTT+TGG + chr7_3:63420005-63420024 Msa1115900:CDS 40.0%
ACGCTGAAGTGAAGTTAACA+AGG + chr7_3:63420121-63420140 Msa1115900:CDS 40.0%
!! CCAGTTTTTAGGAGGATTGA+TGG - chr7_3:63420349-63420368 None:intergenic 40.0%
CCATCAATCCTCCTAAAAAC+TGG + chr7_3:63420346-63420365 Msa1115900:intron 40.0%
! ATCCAACATGCCCAGTTTTT+AGG - chr7_3:63420360-63420379 None:intergenic 40.0%
GTTTATGGTGCGGATCAAAA+TGG + chr7_3:63420530-63420549 Msa1115900:intron 40.0%
!! CTACTCTTTTTAGCGAAGTG+GGG - chr7_3:63420577-63420596 None:intergenic 40.0%
TAGCTTCTGCCAAATCATGA+AGG + chr7_3:63420869-63420888 Msa1115900:intron 40.0%
CATCATGGGACATAATCAAG+TGG + chr7_3:63421210-63421229 Msa1115900:intron 40.0%
GTCCTTGCATTTGCATAAAC+AGG - chr7_3:63421347-63421366 None:intergenic 40.0%
! CAAATGCAAGGACATTTTCC+TGG + chr7_3:63421238-63421257 Msa1115900:intron 40.0%
AGTGCTAAGACTTCATCCAA+CGG + chr7_3:63421549-63421568 Msa1115900:CDS 40.0%
TCTCAGGTATATACTCCTCA+GGG - chr7_3:63421696-63421715 None:intergenic 40.0%
AGATTCTTAGTAGGTGGTGA+TGG + chr7_3:63421715-63421734 Msa1115900:CDS 40.0%
! TTCCATTTGGATTTGGTAGG+AGG + chr7_3:63421797-63421816 Msa1115900:CDS 40.0%
! TCCATTTGGATTTGGTAGGA+GGG + chr7_3:63421798-63421817 Msa1115900:CDS 40.0%
TGGTTCATCACTTGCTTTGA+CGG + chr7_3:63421828-63421847 Msa1115900:CDS 40.0%
!! AGGTGGTGATAAGGTTGATA+TGG + chr7_3:63421903-63421922 Msa1115900:CDS 40.0%
GTAACAGGGTAACAAACTAG+AGG - chr7_3:63421964-63421983 None:intergenic 40.0%
! GCATGGTGGGGGTTTAAATT+TGG - chr7_3:63419365-63419384 None:intergenic 45.0%
TGGTGAAGGTGGCCTATTAT+GGG - chr7_3:63419400-63419419 None:intergenic 45.0%
ATGGTGAAGGTGGCCTATTA+TGG - chr7_3:63419401-63419420 None:intergenic 45.0%
TTGGTATCACTGAGCCTAGA+TGG - chr7_3:63419420-63419439 None:intergenic 45.0%
GGGGTCGGTAGCTAAAATTA+AGG - chr7_3:63419561-63419580 None:intergenic 45.0%
TTTAGCTACCGACCCCAATT+TGG + chr7_3:63419565-63419584 Msa1115900:CDS 45.0%
! TAGGTCAACGGATTTGGGTT+TGG + chr7_3:63419777-63419796 Msa1115900:CDS 45.0%
CATCTTGTGTCGTATGAGCA+TGG + chr7_3:63419822-63419841 Msa1115900:CDS 45.0%
GTTCGGGAGTTTATGCATGT+AGG + chr7_3:63419898-63419917 Msa1115900:CDS 45.0%
! GGTGAAGTACTTGGACCTTT+GGG + chr7_3:63419937-63419956 Msa1115900:CDS 45.0%
! GTGAAGTACTTGGACCTTTG+GGG + chr7_3:63419938-63419957 Msa1115900:CDS 45.0%
GGATTGTCAAGGAGACATGA+TGG + chr7_3:63420068-63420087 Msa1115900:CDS 45.0%
GTAGGATGAGGCTTACTTGT+AGG - chr7_3:63420327-63420346 None:intergenic 45.0%
!! CAACATGCCCAGTTTTTAGG+AGG - chr7_3:63420357-63420376 None:intergenic 45.0%
CTCCTAAAAACTGGGCATGT+TGG + chr7_3:63420355-63420374 Msa1115900:intron 45.0%
! TATTTTGCCGCTCTCTTGCA+TGG + chr7_3:63420627-63420646 Msa1115900:intron 45.0%
CATCTAACATCGACCGTGAA+CGG - chr7_3:63420690-63420709 None:intergenic 45.0%
CAAGTGGCAATGCAAATGCA+AGG + chr7_3:63421226-63421245 Msa1115900:intron 45.0%
! TGCAAGGACATTTTCCTTGC+TGG + chr7_3:63421242-63421261 Msa1115900:intron 45.0%
! GACATTTTCCTTGCTGGATG+TGG + chr7_3:63421248-63421267 Msa1115900:intron 45.0%
TGGAACAGACACATCTTCAG+TGG + chr7_3:63421378-63421397 Msa1115900:CDS 45.0%
CATCTTCAGTGGCAATGCAA+TGG + chr7_3:63421389-63421408 Msa1115900:CDS 45.0%
AGTGGCAATGCAATGGACAA+TGG + chr7_3:63421396-63421415 Msa1115900:CDS 45.0%
AATGCAATGGACAATGGCTG+AGG + chr7_3:63421402-63421421 Msa1115900:CDS 45.0%
TGATTGTGGGTCCCTCATAA+TGG - chr7_3:63421665-63421684 None:intergenic 45.0%
TTATGAGGGACCCACAATCA+TGG + chr7_3:63421665-63421684 Msa1115900:CDS 45.0%
TATGAGGGACCCACAATCAT+GGG + chr7_3:63421666-63421685 Msa1115900:CDS 45.0%
CTCTCAGGTATATACTCCTC+AGG - chr7_3:63421697-63421716 None:intergenic 45.0%
CCACCTACTAAGAATCTCTC+AGG - chr7_3:63421712-63421731 None:intergenic 45.0%
CCTGAGAGATTCTTAGTAGG+TGG + chr7_3:63421709-63421728 Msa1115900:CDS 45.0%
!! GTAGGTGGTGATGGAATCAA+CGG + chr7_3:63421724-63421743 Msa1115900:CDS 45.0%
! CCATTTGGATTTGGTAGGAG+GGG + chr7_3:63421799-63421818 Msa1115900:CDS 45.0%
GTCAAAGCAAGTGATGAACC+AGG - chr7_3:63421829-63421848 None:intergenic 45.0%
! GAAGGGTCATCATTTTCTGC+TGG + chr7_3:63421928-63421947 Msa1115900:CDS 45.0%
TAGTGATCTTGGGCATGGTG+GGG - chr7_3:63419377-63419396 None:intergenic 50.0%
GTAGTGATCTTGGGCATGGT+GGG - chr7_3:63419378-63419397 None:intergenic 50.0%
ATGGGTAGTGATCTTGGGCA+TGG - chr7_3:63419382-63419401 None:intergenic 50.0%
ATAGGCCACCTTCACCATCT+AGG + chr7_3:63419403-63419422 Msa1115900:CDS 50.0%
TCACTGAGCCTAGATGGTGA+AGG - chr7_3:63419414-63419433 None:intergenic 50.0%
GAGAGGATCCAAATTGGGGT+CGG - chr7_3:63419576-63419595 None:intergenic 50.0%
CTGCCCCATATGGTCCTTAT+TGG + chr7_3:63419629-63419648 Msa1115900:CDS 50.0%
! GGGTGAAGTACTTGGACCTT+TGG + chr7_3:63419936-63419955 Msa1115900:CDS 50.0%
! GGAGGATTGATGGTAGGATG+AGG - chr7_3:63420339-63420358 None:intergenic 50.0%
TGGTGCGGATCAAAATGGGT+AGG + chr7_3:63420535-63420554 Msa1115900:intron 50.0%
TGCGGATCAAAATGGGTAGG+TGG + chr7_3:63420538-63420557 Msa1115900:intron 50.0%
GCGGATCAAAATGGGTAGGT+GGG + chr7_3:63420539-63420558 Msa1115900:intron 50.0%
TCTTGCATGGAGCGACTTTG+AGG + chr7_3:63420640-63420659 Msa1115900:intron 50.0%
! TGCAAGGACATTTTCCTGGC+TGG + chr7_3:63421358-63421377 Msa1115900:intron 50.0%
AAGATGTGTCTGTTCCAGCC+AGG - chr7_3:63421375-63421394 None:intergenic 50.0%
CAGGGTTGACCCATGATTGT+GGG - chr7_3:63421678-63421697 None:intergenic 50.0%
TCAGGGTTGACCCATGATTG+TGG - chr7_3:63421679-63421698 None:intergenic 50.0%
ACAATCATGGGTCAACCCTG+AGG + chr7_3:63421678-63421697 Msa1115900:CDS 50.0%
CCCCTCCTACCAAATCCAAA+TGG - chr7_3:63421802-63421821 None:intergenic 50.0%
AGTGATCTTGGGCATGGTGG+GGG - chr7_3:63419376-63419395 None:intergenic 55.0%
GGTAGTGATCTTGGGCATGG+TGG - chr7_3:63419379-63419398 None:intergenic 55.0%
CTGAGCCTAGATGGTGAAGG+TGG - chr7_3:63419411-63419430 None:intergenic 55.0%
AGTCGCTCCATGCAAGAGAG+CGG - chr7_3:63420637-63420656 None:intergenic 55.0%
TTCCTTGCTGGATGTGGCCA+TGG + chr7_3:63421254-63421273 Msa1115900:intron 55.0%
!! CTAAGAGCAAACGGTGCCGT+TGG - chr7_3:63421568-63421587 None:intergenic 55.0%
TTTGGTAGGAGGGGTTGTCC+TGG + chr7_3:63421808-63421827 Msa1115900:CDS 55.0%
GACCATGGCCACATCCAGCA+AGG - chr7_3:63421259-63421278 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 63419256 63422002 63419256 ID=Msa1115900;Name=Msa1115900
chr7_3 mRNA 63419256 63422002 63419256 ID=Msa1115900-mRNA-1;Parent=Msa1115900;Name=Msa1115900-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|0|0|1|1|1|2|0|516
chr7_3 exon 63419256 63420167 63419256 ID=Msa1115900-mRNA-1:exon:14891;Parent=Msa1115900-mRNA-1
chr7_3 exon 63421364 63422002 63421364 ID=Msa1115900-mRNA-1:exon:14892;Parent=Msa1115900-mRNA-1
chr7_3 CDS 63419256 63420167 63419256 ID=Msa1115900-mRNA-1:cds;Parent=Msa1115900-mRNA-1
chr7_3 CDS 63421364 63422002 63421364 ID=Msa1115900-mRNA-1:cds;Parent=Msa1115900-mRNA-1
Gene Sequence

>Msa1115900

ATGGCATTTGATGGTGCTACTATTTTCTTCTACATCTTCTCCTTTCTTCTAGCTTTGCTAATTTTCACATTACTTGTCAACAATAAACGAACCACAAATGGTAGCTCCAAATTTAAACCCCCACCATGCCCAAGATCACTACCCATAATAGGCCACCTTCACCATCTAGGCTCAGTGATACCAAAATCATTCCAAACACTTTCTCACCAATATGGTCCTTTAATTCAGCTCAATCTTGGTGCCTCAACTTCTATAGTTGTCTCCAATGCACAAGTTGCCAAACAAGTCATGAAAACACATGACCTTAATTTTAGCTACCGACCCCAATTTGGATCCTCTCATGATTACTTATACGAAGGGTCTTATTTCATCACTGCCCCATATGGTCCTTATTGGAGATTCATGAAAAAAATATGCGTTACTAAATTACTATCTAGCTCTCAACTTGGTCACTTCATACATATTAGAGAGCAAGAATTAGAGAAACTCTTGAAGTCTCTTGTGGTATGCTCAAGTGAAAATAGGTCAACGGATTTGGGTTTGGACTTGACTACTTTGACCAATAACATCTTGTGTCGTATGAGCATGGGAACCACATGCTTTCAAAAATACAATATTGATCCTAAGGTTATTCAATGTTTGGTTCGGGAGTTTATGCATGTAGGAGCTAAATTGAGTATGGGTGAAGTACTTGGACCTTTGGGGAAGTTTGACTTGTTTGGTTATGGGAAAAAGCTTACGAAAATAGTGGGGGAATTTGACAAGATTTTGGAAGGTTTCTTGAAGGAACATGAAGAGAGAATAAACACTGAGGATTGTCAAGGAGACATGATGGATATCCTATTAGAAGTGTATAGAAATGAAAACGCTGAAGTGAAGTTAACAAGGAATGATATCAAGGCGTTCTTCCTAGACATTTTCCTGGCTGGAACAGACACATCTTCAGTGGCAATGCAATGGACAATGGCTGAGGTAATGAACAACCCTAAAATATTGAAGAAATTAAGGGCTGAGATTAATGATGTAGTAGGCACTAATAGATTGGTCAAAGAATCAGACATTCCAAAAATGCCTTACTTACAAGCATGTGTGAAGGAAGTGCTAAGACTTCATCCAACGGCACCGTTTGCTCTTAGACAATCATCAGAAGATTGCAAAATCAACGGCTATGATATAAAAGCTCATACTAGGACACTTGTCAATGTATATGCCATTATGAGGGACCCACAATCATGGGTCAACCCTGAGGAGTATATACCTGAGAGATTCTTAGTAGGTGGTGATGGAATCAACGGTGAAGATCATGAACATGTGAATAAAATGGATGGTGATGATTTTAGGTATATTCCATTTGGATTTGGTAGGAGGGGTTGTCCTGGTTCATCACTTGCTTTGACGGTTATACATGTGACAATTGCTGCATTGATTCAATGTTTTGAATGGAAAATTAAAGGTGGTGATAAGGTTGATATGGAAGAAGGGTCATCATTTTCTGCTGGATTAGCAAAACCTCTAGTTTGTTACCCTGTTACTTGTTTTAATCCTTTTTAA
Protein sequence

>Msa1115900

MAFDGATIFFYIFSFLLALLIFTLLVNNKRTTNGSSKFKPPPCPRSLPIIGHLHHLGSVIPKSFQTLSHQYGPLIQLNLGASTSIVVSNAQVAKQVMKTHDLNFSYRPQFGSSHDYLYEGSYFITAPYGPYWRFMKKICVTKLLSSSQLGHFIHIREQELEKLLKSLVVCSSENRSTDLGLDLTTLTNNILCRMSMGTTCFQKYNIDPKVIQCLVREFMHVGAKLSMGEVLGPLGKFDLFGYGKKLTKIVGEFDKILEGFLKEHEERINTEDCQGDMMDILLEVYRNENAEVKLTRNDIKAFFLDIFLAGTDTSSVAMQWTMAEVMNNPKILKKLRAEINDVVGTNRLVKESDIPKMPYLQACVKEVLRLHPTAPFALRQSSEDCKINGYDIKAHTRTLVNVYAIMRDPQSWVNPEEYIPERFLVGGDGINGEDHEHVNKMDGDDFRYIPFGFGRRGCPGSSLALTVIHVTIAALIQCFEWKIKGGDKVDMEEGSSFSAGLAKPLVCYPVTCFNPF*