AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0622950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622950 MtrunA17_Chr8g0377961 98.065 620 11 1 1 620 1 619 0.0 1253
Msa0622950 MtrunA17_Chr8g0369891 46.441 562 284 8 40 598 31 578 4.19e-163 485
Msa0622950 MtrunA17_Chr5g0407701 46.372 565 283 10 40 598 25 575 1.15e-162 484
Msa0622950 MtrunA17_Chr7g0262161 44.404 554 266 11 61 597 46 574 2.90e-149 449
Msa0622950 MtrunA17_Chr4g0026641 42.617 596 323 10 23 610 6 590 5.11e-146 441
Msa0622950 MtrunA17_Chr2g0285121 42.459 610 300 15 39 610 23 619 1.04e-143 436
Msa0622950 MtrunA17_Chr2g0285111 42.717 611 297 15 39 610 26 622 1.07e-143 436
Msa0622950 MtrunA17_Chr4g0057531 42.906 585 296 13 38 597 28 599 6.49e-141 428
Msa0622950 MtrunA17_Chr3g0136151 45.217 575 274 11 39 599 33 580 7.81e-141 427
Msa0622950 MtrunA17_Chr3g0120521 42.542 590 294 16 36 598 25 596 9.72e-140 425
Msa0622950 MtrunA17_Chr8g0354771 43.546 581 296 15 37 598 19 586 6.88e-139 423
Msa0622950 MtrunA17_Chr1g0152771 41.653 617 324 14 15 620 2 593 2.91e-137 419
Msa0622950 MtrunA17_Chr4g0037221 45.336 536 265 12 78 598 60 582 4.12e-137 418
Msa0622950 MtrunA17_Chr4g0053781 41.919 594 303 15 42 620 29 595 6.90e-137 417
Msa0622950 MtrunA17_Chr3g0143251 43.428 601 297 14 17 599 9 584 3.42e-136 416
Msa0622950 MtrunA17_Chr4g0057471 43.144 547 278 12 70 598 1 532 5.53e-136 414
Msa0622950 MtrunA17_Chr4g0076611 42.937 538 270 14 81 597 1 522 1.53e-133 407
Msa0622950 MtrunA17_Chr7g0246451 42.179 569 286 12 39 597 36 571 2.08e-133 408
Msa0622950 MtrunA17_Chr2g0300751 41.830 612 294 17 21 597 7 591 2.45e-133 409
Msa0622950 MtrunA17_Chr8g0351011 43.210 567 285 9 39 597 41 578 1.61e-132 406
Msa0622950 MtrunA17_Chr1g0204321 40.461 608 322 14 14 597 5 596 3.08e-128 395
Msa0622950 MtrunA17_Chr7g0250481 38.550 607 305 12 44 598 32 622 1.35e-127 394
Msa0622950 MtrunA17_Chr4g0020651 41.077 594 317 13 38 620 26 597 2.32e-126 390
Msa0622950 MtrunA17_Chr7g0266051 41.217 575 293 15 58 620 12 553 3.44e-126 388
Msa0622950 MtrunA17_Chr8g0376841 40.484 578 297 11 39 599 37 584 7.79e-126 383
Msa0622950 MtrunA17_Chr6g0470851 40.663 573 285 14 37 598 30 558 3.85e-125 386
Msa0622950 MtrunA17_Chr1g0189561 38.412 617 331 16 23 620 13 599 4.74e-125 387
Msa0622950 MtrunA17_Chr5g0401511 41.930 570 302 11 38 596 27 578 8.18e-125 386
Msa0622950 MtrunA17_Chr7g0227991 40.620 581 296 13 38 609 33 573 1.53e-124 385
Msa0622950 MtrunA17_Chr8g0344971 40.468 598 287 15 51 617 33 592 1.67e-124 385
Msa0622950 MtrunA17_Chr8g0334491 41.338 583 285 18 38 609 29 565 2.07e-124 384
Msa0622950 MtrunA17_Chr7g0250391 39.185 638 313 18 18 609 10 618 5.50e-124 385
Msa0622950 MtrunA17_Chr6g0470881 41.084 572 284 13 37 598 30 558 6.63e-124 383
Msa0622950 MtrunA17_Chr7g0250411 40.672 595 302 18 40 598 29 608 7.73e-124 385
Msa0622950 MtrunA17_Chr4g0057481 43.253 541 268 14 98 616 11 534 1.73e-123 380
Msa0622950 MtrunA17_Chr1g0146251 41.289 574 283 15 38 598 31 563 3.23e-123 381
Msa0622950 MtrunA17_Chr1g0170081 40.309 583 295 12 38 609 31 571 4.32e-123 381
Msa0622950 MtrunA17_Chr4g0070391 41.227 587 305 15 23 597 11 569 1.87e-122 380
Msa0622950 MtrunA17_Chr5g0398241 41.408 611 309 14 1 598 1 575 2.34e-122 379
Msa0622950 MtrunA17_Chr7g0250371 39.286 616 304 16 40 609 29 620 3.40e-121 377
Msa0622950 MtrunA17_Chr5g0398401 41.244 611 310 14 1 598 1 575 5.03e-121 376
Msa0622950 MtrunA17_Chr3g0079971 40.068 589 298 15 23 597 9 556 2.63e-120 374
Msa0622950 MtrunA17_Chr7g0248871 37.002 627 338 16 22 620 8 605 3.77e-120 374
Msa0622950 MtrunA17_Chr8g0334521 39.094 596 302 16 17 597 11 560 4.14e-119 370
Msa0622950 MtrunA17_Chr3g0134621 39.174 605 306 14 16 609 7 560 2.12e-118 369
Msa0622950 MtrunA17_Chr1g0146271 39.474 570 297 12 38 598 31 561 7.10e-118 367
Msa0622950 MtrunA17_Chr4g0057061 40.273 586 302 16 40 610 58 610 2.24e-117 367
Msa0622950 MtrunA17_Chr7g0250331 38.942 624 316 16 40 609 29 641 9.57e-117 366
Msa0622950 MtrunA17_Chr8g0354741 46.522 460 209 13 152 598 21 456 3.35e-115 357
Msa0622950 MtrunA17_Chr4g0057461 44.632 475 221 12 158 607 3 460 9.42e-115 356
Msa0622950 MtrunA17_Chr8g0345971 40.981 571 279 13 67 620 70 599 3.20e-114 358
Msa0622950 MtrunA17_Chr7g0248861 37.643 611 320 18 41 620 27 607 5.20e-114 360
Msa0622950 MtrunA17_Chr7g0248861 51.639 244 98 8 144 382 632 860 1.70e-58 211
Msa0622950 MtrunA17_Chr8g0344331 40.238 589 298 15 58 620 53 613 7.39e-114 358
Msa0622950 MtrunA17_Chr8g0345981 41.441 555 283 14 81 620 71 598 2.95e-112 353
Msa0622950 MtrunA17_Chr5g0398351 40.523 612 313 16 1 598 752 1326 4.79e-112 367
Msa0622950 MtrunA17_Chr5g0398351 41.889 561 288 12 43 598 28 555 7.12e-111 363
Msa0622950 MtrunA17_Chr1g0189251 38.889 576 304 11 62 620 50 594 3.23e-111 350
Msa0622950 MtrunA17_Chr4g0057491 43.305 478 238 11 158 616 3 466 4.52e-111 346
Msa0622950 MtrunA17_Chr5g0423261 44.075 481 232 13 157 616 2 466 4.72e-111 346
Msa0622950 MtrunA17_Chr5g0398311 39.731 594 309 15 27 610 26 580 3.39e-110 348
Msa0622950 MtrunA17_Chr5g0398331 39.658 585 305 15 38 610 36 584 8.62e-110 347
Msa0622950 MtrunA17_Chr4g0057511 43.487 476 230 13 162 616 3 460 2.07e-109 342
Msa0622950 MtrunA17_Chr7g0246461 39.273 550 270 13 81 618 80 577 7.15e-109 344
Msa0622950 MtrunA17_Chr8g0345991 40.395 557 284 16 81 620 69 594 8.95e-109 344
Msa0622950 MtrunA17_Chr7g0276151 38.226 620 327 16 25 620 9 596 3.75e-107 340
Msa0622950 MtrunA17_Chr3g0143241 42.128 470 235 10 37 495 30 473 2.82e-104 327
Msa0622950 MtrunA17_Chr8g0345961 37.700 626 324 15 24 620 9 597 4.81e-102 327
Msa0622950 MtrunA17_Chr4g0035881 47.861 374 127 6 237 599 4 320 1.02e-99 307
Msa0622950 MtrunA17_Chr2g0303881 38.819 559 291 12 81 620 41 567 2.28e-97 313
Msa0622950 MtrunA17_Chr2g0301011 39.759 498 215 14 110 598 4 425 6.39e-92 292
Msa0622950 MtrunA17_Chr7g0250461 39.819 442 236 11 40 464 29 457 9.01e-92 292
Msa0622950 MtrunA17_Chr5g0439271 40.509 432 217 12 195 598 8 427 6.05e-77 256
Msa0622950 MtrunA17_Chr7g0261691 41.880 351 178 11 154 494 13 347 1.92e-76 247
Msa0622950 MtrunA17_Chr4g0026651 45.338 311 136 6 96 381 2 303 5.90e-76 244
Msa0622950 MtrunA17_Chr3g0097061 45.152 330 145 8 110 435 4 301 4.10e-75 246
Msa0622950 MtrunA17_Chr6g0480721 45.455 308 145 6 81 387 5 290 4.14e-75 252
Msa0622950 MtrunA17_Chr6g0480721 50.394 127 54 3 481 599 306 431 8.58e-27 115
Msa0622950 MtrunA17_Chr2g0298601 34.126 589 328 20 50 592 54 628 1.59e-70 243
Msa0622950 MtrunA17_Chr4g0071871 33.111 601 340 19 60 616 71 653 2.79e-69 240
Msa0622950 MtrunA17_Chr3g0105461 42.566 343 141 9 38 378 30 318 1.83e-66 221
Msa0622950 MtrunA17_Chr4g0075331 33.505 582 336 18 70 611 3 573 1.54e-64 226
Msa0622950 MtrunA17_Chr2g0302951 31.879 596 346 18 61 612 92 671 2.72e-64 227
Msa0622950 MtrunA17_Chr5g0447171 44.595 296 135 8 320 600 9 290 6.99e-61 211
Msa0622950 MtrunA17_Chr3g0103061 38.745 271 141 6 19 275 1 260 1.16e-56 192
Msa0622950 MtrunA17_Chr2g0301911 35.946 370 196 10 169 534 28 360 6.05e-56 194
Msa0622950 MtrunA17_Chr8g0380961 30.877 570 347 14 82 612 118 679 2.21e-54 199
Msa0622950 MtrunA17_Chr3g0103071 38.636 264 152 5 288 546 1 259 9.48e-49 171
Msa0622950 MtrunA17_Chr8g0346361 47.465 217 84 6 170 384 3 191 5.29e-48 175
Msa0622950 MtrunA17_Chr8g0346361 48.276 116 52 2 488 596 208 322 9.79e-25 108
Msa0622950 MtrunA17_Chr2g0312841 46.117 206 86 4 170 375 8 188 1.27e-46 162
Msa0622950 MtrunA17_Chr4g0035871 54.000 150 67 1 48 195 1 150 5.61e-42 149
Msa0622950 MtrunA17_Chr2g0301021 30.958 407 157 13 38 433 31 324 3.53e-38 145
Msa0622950 MtrunA17_Chr5g0434941 82.432 74 13 0 293 366 1 74 2.40e-32 119
Msa0622950 MtrunA17_Chr5g0436021 44.318 176 80 5 196 371 31 188 6.31e-31 119
Msa0622950 MtrunA17_Chr3g0143021 51.429 105 49 1 78 182 4 106 1.80e-29 112
Msa0622950 MtrunA17_Chr5g0439281 35.602 191 105 6 24 197 8 197 8.80e-29 113
Msa0622950 MtrunA17_Chr3g0142981 44.068 177 58 4 226 391 48 194 5.31e-28 111
Msa0622950 MtrunA17_Chr7g0261701 49.580 119 50 3 486 597 3 118 9.13e-27 110
Msa0622950 MtrunA17_Chr3g0143231 65.169 89 23 2 515 596 2 89 8.95e-26 101
Msa0622950 MtrunA17_Chr3g0105451 54.054 111 38 2 505 608 9 113 7.88e-25 104
Msa0622950 MtrunA17_Chr7g0250441 55.556 99 36 2 508 598 9 107 9.05e-25 105
Msa0622950 MtrunA17_Chr5g0418921 47.967 123 57 1 500 615 1 123 3.79e-24 99.8
Msa0622950 MtrunA17_Chr5g0447151 41.270 126 63 3 44 159 31 155 3.99e-24 99.0
Msa0622950 MtrunA17_Chr3g0142971 63.529 85 23 2 515 592 2 85 3.44e-23 94.0
Msa0622950 MtrunA17_Chr8g0346351 35.032 157 95 3 17 171 8 159 1.50e-20 89.4
Msa0622950 MtrunA17_Chr4g0057501 40.000 125 65 3 44 159 7 130 1.83e-20 87.8
Msa0622950 MtrunA17_Chr4g0071191 40.164 122 65 2 485 599 31 151 2.47e-19 87.8
Msa0622950 MtrunA17_Chr4g0026661 54.167 72 28 1 531 597 12 83 8.69e-18 84.0
Msa0622950 MtrunA17_Chr2g0312861 56.164 73 25 1 531 596 1 73 9.36e-18 84.7
Msa0622950 MtrunA17_Chr2g0301031 53.333 75 28 1 531 598 1 75 4.49e-17 81.3
Msa0622950 MtrunA17_Chr1g0171421 43.902 82 43 1 42 123 46 124 8.27e-16 74.3
Msa0622950 MtrunA17_Chr7g0261681 41.975 81 44 1 81 158 1 81 5.27e-15 71.2
Msa0622950 MtrunA17_Chr8g0354731 36.719 128 55 3 44 157 54 169 1.41e-14 72.0
Msa0622950 MtrunA17_Chr4g0057521 42.353 85 47 1 75 157 13 97 6.00e-14 70.1
Msa0622950 MtrunA17_Chr2g0301901 37.500 96 59 1 37 132 30 124 1.38e-13 68.6
Msa0622950 MtrunA17_Chr2g0312831 32.090 134 88 2 15 146 6 138 7.74e-13 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0622950 AT1G32960.1 51.946 591 272 8 37 620 26 611 0.0 602
Msa0622950 AT4G10550.1 50.082 607 289 9 23 620 11 612 0.0 587
Msa0622950 AT4G10540.1 50.000 590 285 7 37 620 24 609 0.0 585
Msa0622950 AT4G10520.1 49.833 600 279 9 24 620 10 590 0.0 584
Msa0622950 AT4G10550.3 50.250 601 285 9 29 620 33 628 0.0 584
Msa0622950 AT1G32940.1 51.777 591 273 8 37 620 23 608 0.0 578
Msa0622950 AT1G32950.1 50.000 610 288 8 20 620 6 607 0.0 570
Msa0622950 AT4G10510.3 48.950 619 299 11 10 620 2 611 0.0 570
Msa0622950 AT1G32940.3 52.548 569 258 8 37 598 23 586 0.0 569
Msa0622950 AT4G10510.1 50.086 583 281 8 43 620 22 599 0.0 567
Msa0622950 AT4G10550.4 50.624 561 266 8 66 620 1 556 0.0 551
Msa0622950 AT4G10550.2 50.624 561 266 8 66 620 1 556 0.0 551
Msa0622950 AT4G10530.1 47.204 608 288 11 19 620 1 581 0.0 550
Msa0622950 AT4G21650.1 50.498 602 247 10 38 620 36 605 0.0 548
Msa0622950 AT1G32940.4 51.957 562 258 8 66 620 1 557 0.0 547
Msa0622950 AT1G32940.2 51.957 562 258 8 66 620 1 557 0.0 547
Msa0622950 AT4G10510.4 50.000 560 270 8 66 620 1 555 0.0 540
Msa0622950 AT1G32950.2 51.241 564 258 8 66 620 1 556 0.0 537
Msa0622950 AT4G21630.1 47.771 628 281 12 9 620 2 598 4.73e-179 526
Msa0622950 AT4G10510.2 49.358 545 266 8 81 620 1 540 6.84e-178 521
Msa0622950 AT1G66220.1 46.645 611 293 11 17 620 6 590 1.40e-177 522
Msa0622950 AT5G11940.1 44.444 603 315 4 19 620 13 596 7.18e-173 510
Msa0622950 AT1G66210.1 45.812 585 293 8 37 620 34 595 1.14e-165 492
Msa0622950 AT4G21640.1 44.817 627 266 10 12 620 8 572 3.49e-164 487
Msa0622950 AT4G21323.1 45.000 580 288 12 43 617 80 633 8.91e-158 473
Msa0622950 AT1G20160.1 43.760 601 300 13 24 610 16 592 3.72e-148 447
Msa0622950 AT1G20160.2 46.337 546 261 11 79 610 26 553 3.81e-147 443
Msa0622950 AT1G32970.1 42.834 607 303 12 19 620 1 568 4.97e-147 443
Msa0622950 AT1G04110.1 43.952 587 281 14 51 609 31 597 3.20e-146 442
Msa0622950 AT2G04160.1 42.036 609 316 13 34 620 22 615 6.11e-144 436
Msa0622950 AT1G20150.1 42.736 592 286 14 44 610 33 596 1.61e-140 428
Msa0622950 AT4G21326.1 42.086 556 298 5 66 620 1 533 3.47e-139 422
Msa0622950 AT5G45650.2 42.525 602 291 16 39 597 22 611 1.11e-138 423
Msa0622950 AT5G45650.1 42.525 602 291 16 39 597 22 611 1.11e-138 423
Msa0622950 AT4G26330.2 44.883 557 275 15 73 612 13 554 2.71e-135 413
Msa0622950 AT5G67360.1 42.353 595 300 15 29 604 12 582 5.75e-133 407
Msa0622950 AT4G34980.1 44.029 561 283 13 73 619 49 592 6.80e-133 407
Msa0622950 AT3G14240.1 42.403 566 274 13 80 617 61 602 1.37e-132 407
Msa0622950 AT5G59810.1 41.147 593 302 14 30 597 30 600 1.46e-131 404
Msa0622950 AT4G26330.1 43.783 571 275 16 73 612 13 568 2.17e-131 403
Msa0622950 AT3G14067.1 43.257 571 289 14 60 617 50 598 5.46e-129 398
Msa0622950 AT5G51750.1 43.575 537 275 9 74 597 72 593 1.48e-128 397
Msa0622950 AT5G03620.2 40.133 603 299 15 24 598 9 577 1.97e-127 387
Msa0622950 AT2G05920.1 43.818 550 268 14 63 597 46 569 6.76e-127 392
Msa0622950 AT4G00230.2 42.355 569 290 11 38 598 32 570 1.35e-125 383
Msa0622950 AT5G03620.1 40.299 603 298 15 24 598 9 577 1.65e-125 388
Msa0622950 AT5G59190.1 41.788 548 266 12 62 598 14 519 2.45e-125 386
Msa0622950 AT5G59090.2 41.608 572 284 13 38 601 27 556 1.10e-124 385
Msa0622950 AT5G59090.1 41.725 568 281 13 38 597 27 552 2.77e-124 384
Msa0622950 AT4G00230.1 42.606 568 288 11 38 597 32 569 7.56e-124 384
Msa0622950 AT5G59090.3 41.725 568 279 14 38 597 27 550 1.50e-122 380
Msa0622950 AT1G01900.1 42.486 539 280 12 83 611 81 599 5.17e-119 372
Msa0622950 AT5G59120.1 41.270 567 283 14 39 597 27 551 7.28e-119 370
Msa0622950 AT5G58840.3 39.353 587 280 17 25 600 14 535 1.37e-118 363
Msa0622950 AT1G20160.3 41.264 538 283 13 24 552 16 529 6.38e-117 359
Msa0622950 AT5G58830.1 38.870 602 292 15 13 604 3 538 6.54e-117 364
Msa0622950 AT3G46850.1 40.696 575 284 17 38 597 28 560 1.00e-116 365
Msa0622950 AT5G59100.1 40.172 580 297 16 43 610 34 575 1.62e-116 364
Msa0622950 AT5G59130.4 37.833 600 310 16 23 610 17 565 2.14e-116 364
Msa0622950 AT5G58840.1 39.555 584 277 17 25 597 14 532 3.53e-116 362
Msa0622950 AT3G46840.1 40.070 574 288 14 38 597 29 560 4.56e-115 360
Msa0622950 AT5G59130.1 37.833 600 306 17 23 610 17 561 8.98e-115 359
Msa0622950 AT5G58820.1 40.734 572 258 16 39 597 25 528 1.93e-114 358
Msa0622950 AT5G59130.3 38.393 560 285 14 63 610 15 526 3.08e-113 354
Msa0622950 AT5G59130.2 37.937 601 298 17 23 610 17 555 2.09e-112 353
Msa0622950 AT4G15040.2 39.318 557 278 16 51 597 7 513 7.59e-108 340
Msa0622950 AT4G15040.1 39.318 557 278 16 51 597 7 513 7.59e-108 340
Msa0622950 AT5G67090.1 37.520 621 329 15 19 619 3 584 5.12e-105 334
Msa0622950 AT5G45640.1 38.612 562 288 16 90 609 39 585 5.79e-105 334
Msa0622950 AT5G58840.2 37.109 512 253 16 25 532 14 460 1.11e-88 284
Msa0622950 AT2G39850.1 32.759 580 314 22 63 603 47 589 9.89e-72 246
Msa0622950 AT2G19170.1 32.935 586 341 17 64 610 70 642 1.87e-71 246
Msa0622950 AT2G19170.2 32.935 586 341 17 64 610 70 642 1.87e-71 246
Msa0622950 AT1G30600.1 34.354 588 324 18 61 604 80 649 1.20e-70 244
Msa0622950 AT4G30020.3 33.618 586 314 18 64 598 70 631 3.81e-68 237
Msa0622950 AT4G30020.1 33.618 586 314 18 64 598 70 631 3.81e-68 237
Msa0622950 AT4G30020.4 33.618 586 314 18 64 598 70 631 3.81e-68 237
Msa0622950 AT4G30020.2 33.618 586 314 18 64 598 70 631 3.81e-68 237
Msa0622950 AT5G44530.1 32.705 584 323 20 63 597 90 652 1.93e-63 224
Msa0622950 AT5G44530.2 32.328 597 334 20 63 610 90 665 2.12e-63 225
Msa0622950 AT1G62340.1 32.280 601 342 18 60 610 79 664 1.56e-62 222
Msa0622950 AT4G20430.3 30.875 583 337 19 63 597 103 667 2.83e-60 216
Msa0622950 AT4G20430.1 30.875 583 337 19 63 597 103 667 2.83e-60 216
Msa0622950 AT4G20430.2 31.478 575 320 20 63 597 103 643 5.84e-59 212
Msa0622950 AT5G44530.3 31.827 509 284 18 82 545 106 596 1.68e-49 182
Msa0622950 AT1G71950.1 43.902 82 43 1 41 122 47 125 1.83e-15 73.9
Msa0622950 AT1G32980.1 61.017 59 23 0 561 619 3 61 5.30e-13 68.6

Find 182 sgRNAs with CRISPR-Local

Find 330 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCTTCAGCTGGAAATTC+TGG 0.217907 4_2:+75752497 Msa0622950:CDS
CAAAGACTGTTATAGGAAAA+TGG 0.220891 4_2:+75753604 Msa0622950:CDS
TGGAACCTTCTTCTGATATA+AGG 0.236585 4_2:-75754884 None:intergenic
AGCACCCGGTGTGGACATTT+TGG 0.276373 4_2:+75754262 Msa0622950:CDS
TTCGAAACGGTTTGAGAAAT+AGG 0.281095 4_2:-75752521 None:intergenic
TCACCTTGCTCTTCTAATAT+AGG 0.283071 4_2:-75753467 None:intergenic
CTTCAGGTTTGGAATTGATA+TGG 0.287368 4_2:-75755123 None:intergenic
AATTATAGAGGCCTTGCTTC+TGG 0.298733 4_2:+75752236 Msa0622950:CDS
TGAATATTAAACCGATGTTT+TGG 0.302345 4_2:+75755409 Msa0622950:three_prime_UTR
AGAAGAAGGTTCCACAAATA+AGG 0.303939 4_2:+75754893 Msa0622950:CDS
TTGCATGGTGATTACAGATT+TGG 0.307057 4_2:+75755320 Msa0622950:three_prime_UTR
CTAGAAGTTGGGACTTCATT+GGG 0.311848 4_2:+75751362 Msa0622950:CDS
CTTGATTTCTTGAAGGCATT+TGG 0.311910 4_2:+75751946 Msa0622950:intron
CCTGCATTGATTGCTTTGTT+AGG 0.315288 4_2:-75754954 None:intergenic
GTTGCAACTTGTAGTGGTTT+TGG 0.315811 4_2:-75755060 None:intergenic
GATCTTCTTGTTACAGTTTG+TGG 0.325361 4_2:-75752057 None:intergenic
AGTGGATTCATATTCTTATC+TGG 0.334970 4_2:+75754317 Msa0622950:CDS
TTACTGTTGTATGACTCTTC+AGG 0.345235 4_2:-75755139 None:intergenic
GCTATAGTGAATAGTCCTTA+TGG 0.348636 4_2:+75755206 Msa0622950:three_prime_UTR
ATCACAGTTGTTTCTTCAGC+TGG 0.356297 4_2:+75752488 Msa0622950:CDS
TGTTACCAAAGCTGATCTTA+TGG 0.357629 4_2:-75754417 None:intergenic
GATTGCCATCTGTCCATGTT+AGG 0.364733 4_2:-75755346 None:intergenic
CAAAATGTTATCTTCACTCT+TGG 0.369107 4_2:+75751007 Msa0622950:CDS
GGTGCTAGATGGTTCCTAAA+AGG 0.369584 4_2:+75752083 Msa0622950:CDS
GTTGTATGACTCTTCAGGTT+TGG 0.378921 4_2:-75755134 None:intergenic
TACTTGCTATATCTTCTGCT+TGG 0.382876 4_2:-75751203 None:intergenic
TGGAAATAACCTTACTTTGT+GGG 0.383187 4_2:+75752613 Msa0622950:CDS
TGGTATACTTCCGTGCATTA+AGG 0.383715 4_2:+75753414 Msa0622950:CDS
TAGATGATGGAAACTAATTC+AGG 0.386421 4_2:+75750704 Msa0622950:exon
ACTAGAAGTTGGGACTTCAT+TGG 0.388420 4_2:+75751361 Msa0622950:CDS
GACCCATGGAACATAGGAAT+TGG 0.390726 4_2:-75755010 None:intergenic
GGCTATACCTTTAGCACAGT+TGG 0.393179 4_2:-75753678 None:intergenic
CATCAGCACCCATTTGATAT+CGG 0.396001 4_2:+75754916 Msa0622950:exon
TGAAATGAAGCTTACGTTGA+AGG 0.396560 4_2:-75755288 None:intergenic
TGGCTATCTACAAAGCTTGC+TGG 0.398566 4_2:+75752291 Msa0622950:CDS
GGTTTAATATTCAAATTGTA+TGG 0.400861 4_2:-75755399 None:intergenic
CAAACTCCTTTCCACTTGGA+TGG 0.402536 4_2:-75752011 None:intergenic
GATGTCTTAACTGTTTCTCT+TGG 0.405379 4_2:+75752386 Msa0622950:CDS
TGAGGATACCAATAGCTGTT+AGG 0.408815 4_2:+75755375 Msa0622950:three_prime_UTR
TTAACTGTTTCTCTTGGCAT+TGG 0.414235 4_2:+75752392 Msa0622950:CDS
ACTTGCTATATCTTCTGCTT+GGG 0.417096 4_2:-75751202 None:intergenic
TGAAGTAAGGATTGTCAGTC+TGG 0.419249 4_2:+75753238 Msa0622950:intron
GATTCTTCTGCAAATATCTC+GGG 0.427428 4_2:-75750803 None:intergenic
TTGGAAATAACCTTACTTTG+TGG 0.427732 4_2:+75752612 Msa0622950:CDS
GTGTCCTCCCCGATATCAAA+TGG 0.429188 4_2:-75754925 None:intergenic
GAATTGAAGTTCAAAATTTG+AGG 0.429380 4_2:-75755248 None:intergenic
TTAGGTCAAGGAACCATCAT+AGG 0.431578 4_2:+75751427 Msa0622950:CDS
ATCAGCACCCATTTGATATC+GGG 0.434186 4_2:+75754917 Msa0622950:exon
TGTATGGTCCTAACAGCTAT+TGG 0.434313 4_2:-75755383 None:intergenic
TTTCCAAGTGTAATGGCTGT+TGG 0.435517 4_2:-75752596 None:intergenic
AGAAACAACTGTGATACCTT+TGG 0.439366 4_2:-75752480 None:intergenic
AACACTCTCTTGGATTTGTC+GGG 0.440791 4_2:+75752729 Msa0622950:CDS
AGGTGACCAAGTTGGGTGTT+TGG 0.442891 4_2:-75754390 None:intergenic
AAACACTCTCTTGGATTTGT+CGG 0.443935 4_2:+75752728 Msa0622950:CDS
TATCCAATTCCTATGTTCCA+TGG 0.450910 4_2:+75755007 Msa0622950:three_prime_UTR
GACAATGGAAAACACTCTCT+TGG 0.450936 4_2:+75752719 Msa0622950:CDS
CTTGTCTCCAACTGTGCTAA+AGG 0.451379 4_2:+75753671 Msa0622950:CDS
AGAAGATCATTGGTGCTAGA+TGG 0.451764 4_2:+75752072 Msa0622950:CDS
GATGAGAAAGATGCAACTCT+TGG 0.452575 4_2:-75753633 None:intergenic
TGCAGCCATAAGATCAGCTT+TGG 0.453854 4_2:+75754412 Msa0622950:CDS
AAAATGTTATCTTCACTCTT+GGG 0.457809 4_2:+75751008 Msa0622950:CDS
TGAAGTTTGTGAATGCCATT+TGG 0.459168 4_2:-75751334 None:intergenic
AGATCAGCTTTGGTAACAAC+AGG 0.460348 4_2:+75754422 Msa0622950:CDS
CTGTAGTGTCATTGTTTCCA+AGG 0.462626 4_2:-75752133 None:intergenic
GCATCAGTACAGTGTCCAAC+AGG 0.464038 4_2:-75752320 None:intergenic
AAGGTTATTTCCAAGTGTAA+TGG 0.464304 4_2:-75752603 None:intergenic
ATTAAGGTAGATTATGAAGC+AGG 0.465394 4_2:+75753430 Msa0622950:CDS
TTGATATGGAAGGAAGGTTA+AGG 0.465571 4_2:-75755109 None:intergenic
AACTGTAACAAGAAGATCAT+TGG 0.465970 4_2:+75752062 Msa0622950:CDS
CAACGCGACACGATAGCAAT+TGG 0.470243 4_2:+75752440 Msa0622950:CDS
GTAAAGGAAGCTGGTGGAGT+TGG 0.470952 4_2:+75753349 Msa0622950:CDS
GCCTCTCAAAGCGGAACTGA+TGG 0.471189 4_2:+75754858 Msa0622950:intron
CTAGGTGCATATTGTATACA+TGG 0.473758 4_2:+75750938 Msa0622950:intron
TGGCTGCAGGTGACCAAGTT+GGG 0.475861 4_2:-75754397 None:intergenic
TCATTGAAACTTGCAGACTC+TGG 0.477549 4_2:-75751969 None:intergenic
GTAGTTTCTGTCATTCCAAA+TGG 0.480001 4_2:+75751319 Msa0622950:CDS
TGTAGCATACCCACAAAGTA+AGG 0.480458 4_2:-75752622 None:intergenic
TGATTCTTCTGCAAATATCT+CGG 0.481072 4_2:-75750804 None:intergenic
CACACTAAGAACCTCATCCT+TGG 0.483752 4_2:+75752116 Msa0622950:CDS
TGGAAAGGAGTTTGTCAAGT+TGG 0.485654 4_2:+75752020 Msa0622950:CDS
GTAGAAAATGCAAATTATAG+AGG 0.487178 4_2:+75752224 Msa0622950:CDS
CTCTCAGCTAGAGATGCTAT+TGG 0.487608 4_2:+75752161 Msa0622950:CDS
TGTCATTGTTTCCAAGGATG+AGG 0.488136 4_2:-75752127 None:intergenic
ACTTCACACAACTAGAAGTT+GGG 0.489273 4_2:+75751351 Msa0622950:CDS
TATGCACAGCGTCATGAAGA+TGG 0.492726 4_2:+75753379 Msa0622950:CDS
TTGACAAACTCCTTTCCACT+TGG 0.494530 4_2:-75752015 None:intergenic
AAACAAGAGATGTGCTAGAA+AGG 0.497886 4_2:+75750727 Msa0622950:CDS
CACACAGCTTCAACAGCAGC+TGG 0.497918 4_2:+75752194 Msa0622950:CDS
AACTTCACACAACTAGAAGT+TGG 0.498851 4_2:+75751350 Msa0622950:CDS
GAATTGGATATAATCCTTTG+TGG 0.499516 4_2:-75754994 None:intergenic
GGGTGCTGATGCCTTATTTG+TGG 0.499572 4_2:-75754904 None:intergenic
TTCTGCAGCACTTACAGTAA+AGG 0.500122 4_2:+75753333 Msa0622950:CDS
TAAAATCCAAACACCCAACT+TGG 0.501966 4_2:+75754384 Msa0622950:CDS
TAGCCATGTCAAATGCTTTG+AGG 0.503512 4_2:-75752349 None:intergenic
ACACCGGGTGCTGCTATGTC+CGG 0.508908 4_2:-75754251 None:intergenic
GGCTATCTACAAAGCTTGCT+GGG 0.512176 4_2:+75752292 Msa0622950:CDS
AAAGCTGATCTTATGGCTGC+AGG 0.512788 4_2:-75754410 None:intergenic
AGGAGCACCTTTAGCTCACT+TGG 0.515626 4_2:+75752271 Msa0622950:CDS
GATCAACATACGAAAACAAA+GGG 0.515737 4_2:-75752418 None:intergenic
ATGTCTTGTCCTCATGTGGC+AGG 0.515904 4_2:+75754347 Msa0622950:CDS
TTTCCAACAGCCATTACACT+TGG 0.522045 4_2:+75752593 Msa0622950:CDS
ATTAGAATCAAATAAGATTG+TGG 0.524670 4_2:+75755521 Msa0622950:three_prime_UTR
ATCCAATTCCTATGTTCCAT+GGG 0.525074 4_2:+75755008 Msa0622950:three_prime_UTR
CCATGGTGCTGTATTCGAAA+CGG 0.533211 4_2:-75752534 None:intergenic
AGTTTCAATGATGAAGCAAT+GGG 0.533726 4_2:+75751981 Msa0622950:CDS
TAGATAGCCAAGTGAGCTAA+AGG 0.534407 4_2:-75752278 None:intergenic
ATTTCAACTCAAAAGTTGCA+TGG 0.536725 4_2:+75755305 Msa0622950:three_prime_UTR
CTGAATGAAACAATGGCAGC+AGG 0.538323 4_2:+75753265 Msa0622950:CDS
GCTTGCTGGGACGTTCCTGT+TGG 0.538433 4_2:+75752305 Msa0622950:CDS
CTTCTTTATAGCTATAAACA+TGG 0.540098 4_2:+75751147 Msa0622950:CDS
GCTAGAGATGCTATTGGCCA+TGG 0.541370 4_2:+75752167 Msa0622950:CDS
CGGTAGTTAAGTATTCTTTG+AGG 0.541415 4_2:+75755491 Msa0622950:three_prime_UTR
GGAAAACTCAGCCTTGCAGT+TGG 0.542209 4_2:-75753582 None:intergenic
TATTATGACCCATGGAACAT+AGG 0.542775 4_2:-75755016 None:intergenic
TTGTTTGTTGCAACTTGTAG+TGG 0.543136 4_2:-75755066 None:intergenic
CTTTAGCACAGTTGGAGACA+AGG 0.546000 4_2:-75753670 None:intergenic
TTGGAATTGATATGGAAGGA+AGG 0.546129 4_2:-75755115 None:intergenic
TCCATCAGTTCCGCTTTGAG+AGG 0.546581 4_2:-75754859 None:intergenic
TGGATCACGTGCAATGCGCT+CGG 0.546600 4_2:-75752762 None:intergenic
CTTGCTTCTGGTTTAGCAAG+AGG 0.547357 4_2:+75752248 Msa0622950:CDS
TCTTTCCACGCAACTTCCAA+AGG 0.554837 4_2:+75752464 Msa0622950:CDS
ATGGCTGCAGGTGACCAAGT+TGG 0.555589 4_2:-75754398 None:intergenic
TGTCCTCCCCGATATCAAAT+GGG 0.560097 4_2:-75754924 None:intergenic
TTTGGCTGCATTTCCACCCA+AGG 0.561186 4_2:+75754280 Msa0622950:CDS
AAGTTTCAATGATGAAGCAA+TGG 0.562500 4_2:+75751980 Msa0622950:CDS
GCACTTACAGTAAAGGAAGC+TGG 0.562837 4_2:+75753340 Msa0622950:CDS
GGAATGACAGAAACTACCTC+TGG 0.565610 4_2:-75751313 None:intergenic
TGTGTCTATGACGCCTATGA+TGG 0.567504 4_2:-75751440 None:intergenic
AGGTTTGGAATTGATATGGA+AGG 0.568145 4_2:-75755119 None:intergenic
TTGAAGCTGTGTGAGTTCCA+TGG 0.569128 4_2:-75752184 None:intergenic
GCTGTCTACTGATTAGATGA+TGG 0.570869 4_2:+75750691 Msa0622950:exon
GCTTCTGGTTTAGCAAGAGG+AGG 0.571874 4_2:+75752251 Msa0622950:CDS
TGTTATCTTCACTCTTGGGA+AGG 0.572999 4_2:+75751012 Msa0622950:CDS
ACTGAAAGCAACTTAGGTCA+AGG 0.574792 4_2:+75751415 Msa0622950:CDS
ACAGTTGGAGACAAGGTACT+AGG 0.581400 4_2:-75753663 None:intergenic
GGAGGCCTTATATCAGAAGA+AGG 0.582543 4_2:+75754879 Msa0622950:CDS
CCTAACAAAGCAATCAATGC+AGG 0.582803 4_2:+75754954 Msa0622950:three_prime_UTR
GTTGCATCTTTCTCATCTAG+AGG 0.585537 4_2:+75753639 Msa0622950:CDS
GCGCATTGCACGTGATCCAT+CGG 0.586568 4_2:+75752766 Msa0622950:CDS
AGATGCTGTATTATGACCCA+TGG 0.590460 4_2:-75755024 None:intergenic
TCTCAAAGCGGAACTGATGG+AGG 0.593016 4_2:+75754861 Msa0622950:CDS
CAAACTAATTGCCAAAACAT+CGG 0.597237 4_2:-75755420 None:intergenic
TTGATATCGGGGAGGACACG+TGG 0.603567 4_2:+75754929 Msa0622950:exon
ATCAATGTCTTGTCCTCATG+TGG 0.603786 4_2:+75754343 Msa0622950:CDS
AAAATTCCATCCAAGTGGAA+AGG 0.604125 4_2:+75752005 Msa0622950:CDS
TGCAGCCAAAATGTCCACAC+CGG 0.604840 4_2:-75754267 None:intergenic
ACCATGGCTCATTACAGTTG+CGG 0.605785 4_2:+75752550 Msa0622950:CDS
GGAAGCCTAACATGGACAGA+TGG 0.610473 4_2:+75755341 Msa0622950:three_prime_UTR
ACAGATTTGGAAGCCTAACA+TGG 0.611247 4_2:+75755333 Msa0622950:three_prime_UTR
TTGGCTGCATTTCCACCCAA+GGG 0.612405 4_2:+75754281 Msa0622950:CDS
CAGGGACAGTCCATTGACAA+TGG 0.614731 4_2:+75752704 Msa0622950:intron
GTGGAAGGTTTCCAACTGCA+AGG 0.614861 4_2:+75753571 Msa0622950:intron
TGATCAACATACGAAAACAA+AGG 0.622316 4_2:-75752419 None:intergenic
CTCTTGCTAAACCAGAAGCA+AGG 0.626020 4_2:-75752247 None:intergenic
ATTCTTCTGCAAATATCTCG+GGG 0.626292 4_2:-75750802 None:intergenic
TAACCTATATTAGAAGAGCA+AGG 0.627264 4_2:+75753464 Msa0622950:CDS
TTAAGGTAGATTATGAAGCA+GGG 0.632035 4_2:+75753431 Msa0622950:CDS
TTGCGGCCACTACAATCGAT+AGG 0.633312 4_2:+75752567 Msa0622950:CDS
TCATAATCTACCTTAATGCA+CGG 0.633313 4_2:-75753424 None:intergenic
TAGCCGGACATAGCAGCACC+CGG 0.633717 4_2:+75754248 Msa0622950:intron
ATGAGAACAGTGACAAACGT+TGG 0.635977 4_2:+75755161 Msa0622950:three_prime_UTR
TAGAAGTTGGGACTTCATTG+GGG 0.636639 4_2:+75751363 Msa0622950:CDS
GCAGCCAAAATGTCCACACC+GGG 0.637864 4_2:-75754266 None:intergenic
GCTGCTATTCCTGCCACATG+AGG 0.638035 4_2:-75754356 None:intergenic
GGACATAGCAGCACCCGGTG+TGG 0.639225 4_2:+75754253 Msa0622950:CDS
TGGAAGTCTGAATGAAACAA+TGG 0.642638 4_2:+75753258 Msa0622950:CDS
CATATACAACATTACCACAA+AGG 0.649217 4_2:+75754980 Msa0622950:three_prime_UTR
TGATACCTTTGGAAGTTGCG+TGG 0.649399 4_2:-75752469 None:intergenic
TCAGCACCCATTTGATATCG+GGG 0.652478 4_2:+75754918 Msa0622950:exon
AAAAGTCCTATCGATTGTAG+TGG 0.654640 4_2:-75752573 None:intergenic
ATCATAGGCGTCATAGACAC+AGG 0.655865 4_2:+75751442 Msa0622950:CDS
TCTCACGCTAAATCATCCGA+TGG 0.656781 4_2:-75752782 None:intergenic
TAGGTGCATATTGTATACAT+GGG 0.667259 4_2:+75750939 Msa0622950:intron
GCCGCAACTGTAATGAGCCA+TGG 0.676151 4_2:-75752551 None:intergenic
TATCCTCAAAGCATTTGACA+TGG 0.678885 4_2:+75752346 Msa0622950:CDS
AAAAGTGCAGCCTCTCAAAG+CGG 0.681198 4_2:+75754849 Msa0622950:intron
CTTACAGTAAAGGAAGCTGG+TGG 0.703562 4_2:+75753343 Msa0622950:CDS
GAAGATGGACTCAATGAATG+TGG 0.703870 4_2:+75753394 Msa0622950:CDS
ATACAATGTAGAGTTTCCAG+AGG 0.721115 4_2:+75751297 Msa0622950:intron
GCACCCATTTGATATCGGGG+AGG 0.726600 4_2:+75754921 Msa0622950:exon
TTTGACATGGCTATACACGA+TGG 0.741019 4_2:+75752359 Msa0622950:CDS
CCGTTTCGAATACAGCACCA+TGG 0.744343 4_2:+75752534 Msa0622950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATGTAATGATAATTATT+AGG - chr4_2:75751070-75751089 None:intergenic 10.0%
!! AAAAAATATTATTATGTCAA+CGG - chr4_2:75752980-75752999 None:intergenic 10.0%
!!! GAGATTTTATATATATATTT+AGG - chr4_2:75753179-75753198 None:intergenic 10.0%
!! TTATTTATAAAGAAAAGTTT+AGG - chr4_2:75754771-75754790 None:intergenic 10.0%
!!! TGAATTAATCAAATAATTTT+CGG + chr4_2:75755471-75755490 Msa0622950:three_prime_UTR 10.0%
!! TTAAAAACTAATCTTAATCA+TGG - chr4_2:75751244-75751263 None:intergenic 15.0%
!!! TTTAAAAAAGTGCTAAAAAT+AGG - chr4_2:75751268-75751287 None:intergenic 15.0%
!!! AATATTTTTTGTTGAAAACT+CGG + chr4_2:75752990-75753009 Msa0622950:intron 15.0%
!! TAACAAAAAATCTTAGAATT+TGG + chr4_2:75753891-75753910 Msa0622950:intron 15.0%
!!! GTTCTTTTATTTAATTTTGT+TGG - chr4_2:75753975-75753994 None:intergenic 15.0%
!!! AGCATTATATTTTTGTTTTA+TGG - chr4_2:75754163-75754182 None:intergenic 15.0%
!! ATTGAAATTTGAAGATAATT+TGG - chr4_2:75754490-75754509 None:intergenic 15.0%
!!! GAAGTTATTTATTTTTACTT+TGG - chr4_2:75754580-75754599 None:intergenic 15.0%
!! TTAATATTATTAAGCTCATG+TGG + chr4_2:75753552-75753571 Msa0622950:intron 20.0%
!! AAAAGTAAATAGAGAATTGT+TGG + chr4_2:75753773-75753792 Msa0622950:intron 20.0%
!!! CTAAGATTTTTTGTTATGTT+TGG - chr4_2:75753887-75753906 None:intergenic 20.0%
!!! ATGATATCAATATGTTTTCA+AGG + chr4_2:75754025-75754044 Msa0622950:intron 20.0%
!! ACTAAATAAATGTCTATTTG+AGG + chr4_2:75754106-75754125 Msa0622950:intron 20.0%
!! AAAAATATAATGCTCTTACA+TGG + chr4_2:75754169-75754188 Msa0622950:intron 20.0%
!! AAATTTGAAGATAATTTGGA+TGG - chr4_2:75754486-75754505 None:intergenic 20.0%
!!! CTAGTTAGTTTTGATATTAT+TGG - chr4_2:75754818-75754837 None:intergenic 20.0%
!! GGTTTAATATTCAAATTGTA+TGG - chr4_2:75755402-75755421 None:intergenic 20.0%
!! ATTAGAATCAAATAAGATTG+TGG + chr4_2:75755521-75755540 Msa0622950:three_prime_UTR 20.0%
! CAATTACTACAAACTAAAGT+TGG - chr4_2:75750842-75750861 None:intergenic 25.0%
! TTTATTAAATGCATGTTCCT+AGG + chr4_2:75750920-75750939 Msa0622950:intron 25.0%
! AAAATGTTATCTTCACTCTT+GGG + chr4_2:75751008-75751027 Msa0622950:CDS 25.0%
! CTTCTTTATAGCTATAAACA+TGG + chr4_2:75751147-75751166 Msa0622950:CDS 25.0%
! AGATATAGCAAGTATGAATA+TGG + chr4_2:75751212-75751231 Msa0622950:intron 25.0%
! AACTAATCTTAATCATGGTA+AGG - chr4_2:75751239-75751258 None:intergenic 25.0%
!! GTTTTCATTTTCAAATGCTT+TGG - chr4_2:75751493-75751512 None:intergenic 25.0%
!!! CATTTTCATTTTCTAGTGTT+TGG - chr4_2:75751683-75751702 None:intergenic 25.0%
! CAAACACTAGAAAATGAAAA+TGG + chr4_2:75751681-75751700 Msa0622950:intron 25.0%
!! AAAATGGATTTCTTGCAATA+CGG + chr4_2:75751697-75751716 Msa0622950:intron 25.0%
! CAAGAAATCAAGTTTATCAT+TGG - chr4_2:75751938-75751957 None:intergenic 25.0%
! TGATAAACTTGATTTCTTGA+AGG + chr4_2:75751939-75751958 Msa0622950:intron 25.0%
! GTAGAAAATGCAAATTATAG+AGG + chr4_2:75752224-75752243 Msa0622950:CDS 25.0%
! TCTAGAGAAGAATTCAAATA+GGG - chr4_2:75752882-75752901 None:intergenic 25.0%
!! TTCTAGAGAAGAATTCAAAT+AGG - chr4_2:75752883-75752902 None:intergenic 25.0%
!! ATTTTACTCTTGGAATAAGT+AGG + chr4_2:75753147-75753166 Msa0622950:intron 25.0%
!!! CAAGTAAGAATTTTAAGGTT+GGG - chr4_2:75753702-75753721 None:intergenic 25.0%
!!! ACAAGTAAGAATTTTAAGGT+TGG - chr4_2:75753703-75753722 None:intergenic 25.0%
! ACCTTAAAATTCTTACTTGT+AGG + chr4_2:75753703-75753722 Msa0622950:intron 25.0%
!! ACCTACAAGTAAGAATTTTA+AGG - chr4_2:75753707-75753726 None:intergenic 25.0%
!! TTTAGAAAGAAAAGCACAAT+CGG + chr4_2:75753805-75753824 Msa0622950:intron 25.0%
! CAATTGTTTAAACTAATAGC+CGG - chr4_2:75753831-75753850 None:intergenic 25.0%
!!! TTTTTGTTATGTTTGGTTGA+AGG - chr4_2:75753880-75753899 None:intergenic 25.0%
!! CTTACATGGTTTTCAATTTA+TGG + chr4_2:75754183-75754202 Msa0622950:intron 25.0%
!! ACAGAAAGTAATTTTTGTGT+TGG + chr4_2:75754523-75754542 Msa0622950:intron 25.0%
!! TGTTGTTGTTGTAAAAGTTT+AGG - chr4_2:75754706-75754725 None:intergenic 25.0%
! GAATTGAAGTTCAAAATTTG+AGG - chr4_2:75755251-75755270 None:intergenic 25.0%
!! TGAATATTAAACCGATGTTT+TGG + chr4_2:75755409-75755428 Msa0622950:three_prime_UTR 25.0%
!! TAGATGATGGAAACTAATTC+AGG + chr4_2:75750704-75750723 Msa0622950:exon 30.0%
TGATTCTTCTGCAAATATCT+CGG - chr4_2:75750807-75750826 None:intergenic 30.0%
TAGGTGCATATTGTATACAT+GGG + chr4_2:75750939-75750958 Msa0622950:intron 30.0%
!! TGATACTTTTTAGCAGTTTC+TGG - chr4_2:75750984-75751003 None:intergenic 30.0%
! AGAGTGAAGATAACATTTTG+TGG - chr4_2:75751007-75751026 None:intergenic 30.0%
CAAAATGTTATCTTCACTCT+TGG + chr4_2:75751007-75751026 Msa0622950:CDS 30.0%
! AGCTATAAACATGGATTTTC+AGG + chr4_2:75751156-75751175 Msa0622950:CDS 30.0%
! GCTATAAACATGGATTTTCA+GGG + chr4_2:75751157-75751176 Msa0622950:CDS 30.0%
! TTCAGTGAAAACAGTTTTTG+AGG - chr4_2:75751401-75751420 None:intergenic 30.0%
TTTGGTTGGATATTTGTAAG+AGG - chr4_2:75751475-75751494 None:intergenic 30.0%
! TCATTTTCAAATGCTTTGGT+TGG - chr4_2:75751489-75751508 None:intergenic 30.0%
CTGAAATTTCTGATCTTAAC+CGG - chr4_2:75751555-75751574 None:intergenic 30.0%
!! TTCATTTTCTAGTGTTTGGT+TGG - chr4_2:75751679-75751698 None:intergenic 30.0%
! AAATGGATTTCTTGCAATAC+GGG + chr4_2:75751698-75751717 Msa0622950:intron 30.0%
GTTGTTTGATCTTAATTGGA+CGG - chr4_2:75751757-75751776 None:intergenic 30.0%
CTGAGTTGTTTGATCTTAAT+TGG - chr4_2:75751761-75751780 None:intergenic 30.0%
! TTTTTAAATGCGATTTACCG+AGG + chr4_2:75751802-75751821 Msa0622950:intron 30.0%
!!! GACAACTCATATTTTAACCT+CGG - chr4_2:75751822-75751841 None:intergenic 30.0%
TACACAAAATCCCTAGAAAA+CGG + chr4_2:75751899-75751918 Msa0622950:intron 30.0%
AAGTTTCAATGATGAAGCAA+TGG + chr4_2:75751980-75751999 Msa0622950:CDS 30.0%
AGTTTCAATGATGAAGCAAT+GGG + chr4_2:75751981-75752000 Msa0622950:CDS 30.0%
AACTGTAACAAGAAGATCAT+TGG + chr4_2:75752062-75752081 Msa0622950:CDS 30.0%
! TGTGATCAGTTATTCCTTTT+AGG - chr4_2:75752100-75752119 None:intergenic 30.0%
GATCAACATACGAAAACAAA+GGG - chr4_2:75752421-75752440 None:intergenic 30.0%
TGATCAACATACGAAAACAA+AGG - chr4_2:75752422-75752441 None:intergenic 30.0%
! AAGGTTATTTCCAAGTGTAA+TGG - chr4_2:75752606-75752625 None:intergenic 30.0%
TTGGAAATAACCTTACTTTG+TGG + chr4_2:75752612-75752631 Msa0622950:CDS 30.0%
TGGAAATAACCTTACTTTGT+GGG + chr4_2:75752613-75752632 Msa0622950:CDS 30.0%
CAACTACTTCTGTATCAAAT+TGG + chr4_2:75752643-75752662 Msa0622950:intron 30.0%
ACAGTTGATTGATATAATGC+AGG + chr4_2:75752685-75752704 Msa0622950:intron 30.0%
CAGTTGATTGATATAATGCA+GGG + chr4_2:75752686-75752705 Msa0622950:intron 30.0%
ACTATGAAATGAAGTAACTC+TGG + chr4_2:75753121-75753140 Msa0622950:intron 30.0%
TCATAATCTACCTTAATGCA+CGG - chr4_2:75753427-75753446 None:intergenic 30.0%
ATTAAGGTAGATTATGAAGC+AGG + chr4_2:75753430-75753449 Msa0622950:CDS 30.0%
TTAAGGTAGATTATGAAGCA+GGG + chr4_2:75753431-75753450 Msa0622950:CDS 30.0%
TAACCTATATTAGAAGAGCA+AGG + chr4_2:75753464-75753483 Msa0622950:CDS 30.0%
TATGCATAGATTGACAAGAT+TGG + chr4_2:75753502-75753521 Msa0622950:intron 30.0%
TATTATTAAGCTCATGTGGA+AGG + chr4_2:75753556-75753575 Msa0622950:intron 30.0%
! AGTTTTCCAAAGACTGTTAT+AGG + chr4_2:75753597-75753616 Msa0622950:CDS 30.0%
! CATTTTCCTATAACAGTCTT+TGG - chr4_2:75753606-75753625 None:intergenic 30.0%
CAAAGACTGTTATAGGAAAA+TGG + chr4_2:75753604-75753623 Msa0622950:CDS 30.0%
CAAATTTCAGAAACATGATC+TGG - chr4_2:75753748-75753767 None:intergenic 30.0%
! TAAATAGAGAATTGTTGGCT+AGG + chr4_2:75753778-75753797 Msa0622950:intron 30.0%
ATTTGGATTAAGTCTAACTC+AGG + chr4_2:75753908-75753927 Msa0622950:intron 30.0%
ATCCTACAATACTACAGATA+TGG - chr4_2:75753951-75753970 None:intergenic 30.0%
! AGTGGATTCATATTCTTATC+TGG + chr4_2:75754317-75754336 Msa0622950:CDS 30.0%
TGTAAAAGTTTAGGTGAGTT+GGG - chr4_2:75754697-75754716 None:intergenic 30.0%
TTGTAAAAGTTTAGGTGAGT+TGG - chr4_2:75754698-75754717 None:intergenic 30.0%
CATATACAACATTACCACAA+AGG + chr4_2:75754980-75754999 Msa0622950:three_prime_UTR 30.0%
GAATTGGATATAATCCTTTG+TGG - chr4_2:75754997-75755016 None:intergenic 30.0%
!! ACTCTCACTTTTATACCATA+AGG - chr4_2:75755224-75755243 None:intergenic 30.0%
ATTTCAACTCAAAAGTTGCA+TGG + chr4_2:75755305-75755324 Msa0622950:three_prime_UTR 30.0%
CAAACTAATTGCCAAAACAT+CGG - chr4_2:75755423-75755442 None:intergenic 30.0%
AAACAAGAGATGTGCTAGAA+AGG + chr4_2:75750727-75750746 Msa0622950:CDS 35.0%
ATTCTTCTGCAAATATCTCG+GGG - chr4_2:75750805-75750824 None:intergenic 35.0%
GATTCTTCTGCAAATATCTC+GGG - chr4_2:75750806-75750825 None:intergenic 35.0%
CATGTATACAATATGCACCT+AGG - chr4_2:75750940-75750959 None:intergenic 35.0%
CTAGGTGCATATTGTATACA+TGG + chr4_2:75750938-75750957 Msa0622950:intron 35.0%
!! ACTTGCTATATCTTCTGCTT+GGG - chr4_2:75751205-75751224 None:intergenic 35.0%
!! TACTTGCTATATCTTCTGCT+TGG - chr4_2:75751206-75751225 None:intergenic 35.0%
ATACAATGTAGAGTTTCCAG+AGG + chr4_2:75751297-75751316 Msa0622950:intron 35.0%
GTAGTTTCTGTCATTCCAAA+TGG + chr4_2:75751319-75751338 Msa0622950:CDS 35.0%
TGAAGTTTGTGAATGCCATT+TGG - chr4_2:75751337-75751356 None:intergenic 35.0%
AACTTCACACAACTAGAAGT+TGG + chr4_2:75751350-75751369 Msa0622950:CDS 35.0%
ACTTCACACAACTAGAAGTT+GGG + chr4_2:75751351-75751370 Msa0622950:CDS 35.0%
!! GTGAAAACAGTTTTTGAGGA+GGG - chr4_2:75751397-75751416 None:intergenic 35.0%
!! AGTGAAAACAGTTTTTGAGG+AGG - chr4_2:75751398-75751417 None:intergenic 35.0%
! GTTTTCACTGAAAGCAACTT+AGG + chr4_2:75751409-75751428 Msa0622950:CDS 35.0%
ATGAGTTGTCCAGTGAAAAT+TGG + chr4_2:75751832-75751851 Msa0622950:intron 35.0%
!! CTTGATTTCTTGAAGGCATT+TGG + chr4_2:75751946-75751965 Msa0622950:intron 35.0%
AAAATTCCATCCAAGTGGAA+AGG + chr4_2:75752005-75752024 Msa0622950:CDS 35.0%
GATCTTCTTGTTACAGTTTG+TGG - chr4_2:75752060-75752079 None:intergenic 35.0%
! TATCCTCAAAGCATTTGACA+TGG + chr4_2:75752346-75752365 Msa0622950:CDS 35.0%
! GATGTCTTAACTGTTTCTCT+TGG + chr4_2:75752386-75752405 Msa0622950:CDS 35.0%
! TTAACTGTTTCTCTTGGCAT+TGG + chr4_2:75752392-75752411 Msa0622950:CDS 35.0%
AGAAACAACTGTGATACCTT+TGG - chr4_2:75752483-75752502 None:intergenic 35.0%
TTCGAAACGGTTTGAGAAAT+AGG - chr4_2:75752524-75752543 None:intergenic 35.0%
! AAAAGTCCTATCGATTGTAG+TGG - chr4_2:75752576-75752595 None:intergenic 35.0%
!! AGAGTGTTTTCCATTGTCAA+TGG - chr4_2:75752717-75752736 None:intergenic 35.0%
AAACACTCTCTTGGATTTGT+CGG + chr4_2:75752728-75752747 Msa0622950:CDS 35.0%
TGTGTATGAAGAAGGAAGAA+AGG - chr4_2:75752808-75752827 None:intergenic 35.0%
CTTCTTCATACACACAAACA+CGG + chr4_2:75752814-75752833 Msa0622950:intron 35.0%
TTCTTCATACACACAAACAC+GGG + chr4_2:75752815-75752834 Msa0622950:intron 35.0%
GGTGGCTATACAATATTCAA+CGG + chr4_2:75753067-75753086 Msa0622950:intron 35.0%
! ACTCTGGCAAATTTTACTCT+TGG + chr4_2:75753137-75753156 Msa0622950:intron 35.0%
!! CTATGTCTTCCTTTGAAGTA+AGG + chr4_2:75753225-75753244 Msa0622950:intron 35.0%
ACTGACAATCCTTACTTCAA+AGG - chr4_2:75753237-75753256 None:intergenic 35.0%
TGGAAGTCTGAATGAAACAA+TGG + chr4_2:75753258-75753277 Msa0622950:CDS 35.0%
TCACCTTGCTCTTCTAATAT+AGG - chr4_2:75753470-75753489 None:intergenic 35.0%
TATATTAGAAGAGCAAGGTG+AGG + chr4_2:75753469-75753488 Msa0622950:intron 35.0%
TGCCATATCTGTAGTATTGT+AGG + chr4_2:75753946-75753965 Msa0622950:intron 35.0%
GTTATATATTGCTTCTCTGC+TGG - chr4_2:75754057-75754076 None:intergenic 35.0%
! GAGAAATTCGATTTGAGTGA+AGG + chr4_2:75754077-75754096 Msa0622950:intron 35.0%
TAAAATCCAAACACCCAACT+TGG + chr4_2:75754384-75754403 Msa0622950:CDS 35.0%
TGTTACCAAAGCTGATCTTA+TGG - chr4_2:75754420-75754439 None:intergenic 35.0%
CGAACATCAACATAGTTGTT+TGG + chr4_2:75754453-75754472 Msa0622950:intron 35.0%
TGGAACCTTCTTCTGATATA+AGG - chr4_2:75754887-75754906 None:intergenic 35.0%
AGAAGAAGGTTCCACAAATA+AGG + chr4_2:75754893-75754912 Msa0622950:CDS 35.0%
TATCCAATTCCTATGTTCCA+TGG + chr4_2:75755007-75755026 Msa0622950:three_prime_UTR 35.0%
ATCCAATTCCTATGTTCCAT+GGG + chr4_2:75755008-75755027 Msa0622950:three_prime_UTR 35.0%
TATTATGACCCATGGAACAT+AGG - chr4_2:75755019-75755038 None:intergenic 35.0%
! TTGTTTGTTGCAACTTGTAG+TGG - chr4_2:75755069-75755088 None:intergenic 35.0%
TTGATATGGAAGGAAGGTTA+AGG - chr4_2:75755112-75755131 None:intergenic 35.0%
TTGGAATTGATATGGAAGGA+AGG - chr4_2:75755118-75755137 None:intergenic 35.0%
! AGGTTTGGAATTGATATGGA+AGG - chr4_2:75755122-75755141 None:intergenic 35.0%
! CTTCAGGTTTGGAATTGATA+TGG - chr4_2:75755126-75755145 None:intergenic 35.0%
TTACTGTTGTATGACTCTTC+AGG - chr4_2:75755142-75755161 None:intergenic 35.0%
GCTATAGTGAATAGTCCTTA+TGG + chr4_2:75755206-75755225 Msa0622950:three_prime_UTR 35.0%
TGAAATGAAGCTTACGTTGA+AGG - chr4_2:75755291-75755310 None:intergenic 35.0%
TTGCATGGTGATTACAGATT+TGG + chr4_2:75755320-75755339 Msa0622950:three_prime_UTR 35.0%
CGGTAGTTAAGTATTCTTTG+AGG + chr4_2:75755491-75755510 Msa0622950:three_prime_UTR 35.0%
! GCTGTCTACTGATTAGATGA+TGG + chr4_2:75750691-75750710 Msa0622950:exon 40.0%
TGTTATCTTCACTCTTGGGA+AGG + chr4_2:75751012-75751031 Msa0622950:CDS 40.0%
ACTAGAAGTTGGGACTTCAT+TGG + chr4_2:75751361-75751380 Msa0622950:CDS 40.0%
CTAGAAGTTGGGACTTCATT+GGG + chr4_2:75751362-75751381 Msa0622950:CDS 40.0%
TAGAAGTTGGGACTTCATTG+GGG + chr4_2:75751363-75751382 Msa0622950:CDS 40.0%
ACTGAAAGCAACTTAGGTCA+AGG + chr4_2:75751415-75751434 Msa0622950:CDS 40.0%
TTAGGTCAAGGAACCATCAT+AGG + chr4_2:75751427-75751446 Msa0622950:CDS 40.0%
CATTCATGCAGTCAGCAAAT+CGG + chr4_2:75751523-75751542 Msa0622950:intron 40.0%
CTGAGTCATCCGATGAAAAT+CGG + chr4_2:75751626-75751645 Msa0622950:intron 40.0%
! TAGCACCATCCGATTTTCAT+CGG - chr4_2:75751638-75751657 None:intergenic 40.0%
! GAAAATCGGATGGTGCTAAT+TGG + chr4_2:75751640-75751659 Msa0622950:intron 40.0%
CATTCATGCTGTCAGCAATT+TGG + chr4_2:75751729-75751748 Msa0622950:intron 40.0%
GTTGTCCAGTGAAAATTGGA+TGG + chr4_2:75751836-75751855 Msa0622950:intron 40.0%
! CTTCACCATCCAATTTTCAC+TGG - chr4_2:75751844-75751863 None:intergenic 40.0%
! TCTAGGGATTTTGTGTAGTC+AGG - chr4_2:75751896-75751915 None:intergenic 40.0%
!! CATTACAACGCCGTTTTCTA+GGG - chr4_2:75751912-75751931 None:intergenic 40.0%
!! ACATTACAACGCCGTTTTCT+AGG - chr4_2:75751913-75751932 None:intergenic 40.0%
TCATTGAAACTTGCAGACTC+TGG - chr4_2:75751972-75751991 None:intergenic 40.0%
TGGGAAAAATTCCATCCAAG+TGG + chr4_2:75752000-75752019 Msa0622950:CDS 40.0%
TTGACAAACTCCTTTCCACT+TGG - chr4_2:75752018-75752037 None:intergenic 40.0%
TGGAAAGGAGTTTGTCAAGT+TGG + chr4_2:75752020-75752039 Msa0622950:CDS 40.0%
!! AGAAGATCATTGGTGCTAGA+TGG + chr4_2:75752072-75752091 Msa0622950:CDS 40.0%
TGTCATTGTTTCCAAGGATG+AGG - chr4_2:75752130-75752149 None:intergenic 40.0%
! CTGTAGTGTCATTGTTTCCA+AGG - chr4_2:75752136-75752155 None:intergenic 40.0%
AATTATAGAGGCCTTGCTTC+TGG + chr4_2:75752236-75752255 Msa0622950:CDS 40.0%
TAGATAGCCAAGTGAGCTAA+AGG - chr4_2:75752281-75752300 None:intergenic 40.0%
TAGCCATGTCAAATGCTTTG+AGG - chr4_2:75752352-75752371 None:intergenic 40.0%
TTTGACATGGCTATACACGA+TGG + chr4_2:75752359-75752378 Msa0622950:CDS 40.0%
!! ATCACAGTTGTTTCTTCAGC+TGG + chr4_2:75752488-75752507 Msa0622950:CDS 40.0%
GTTTCTTCAGCTGGAAATTC+TGG + chr4_2:75752497-75752516 Msa0622950:CDS 40.0%
TTTCCAACAGCCATTACACT+TGG + chr4_2:75752593-75752612 Msa0622950:CDS 40.0%
TTTCCAAGTGTAATGGCTGT+TGG - chr4_2:75752599-75752618 None:intergenic 40.0%
TGTAGCATACCCACAAAGTA+AGG - chr4_2:75752625-75752644 None:intergenic 40.0%
GACAATGGAAAACACTCTCT+TGG + chr4_2:75752719-75752738 Msa0622950:CDS 40.0%
AACACTCTCTTGGATTTGTC+GGG + chr4_2:75752729-75752748 Msa0622950:CDS 40.0%
CGTGTTTGTGTGTATGAAGA+AGG - chr4_2:75752816-75752835 None:intergenic 40.0%
!! CTATAGGATTAGTCGGTTCT+TGG - chr4_2:75753024-75753043 None:intergenic 40.0%
AGAACCGACTAATCCTATAG+AGG + chr4_2:75753024-75753043 Msa0622950:intron 40.0%
! AAGGCCTCTATAGGATTAGT+CGG - chr4_2:75753031-75753050 None:intergenic 40.0%
GGCTATACAATATTCAACGG+TGG + chr4_2:75753070-75753089 Msa0622950:intron 40.0%
TGAAGTAAGGATTGTCAGTC+TGG + chr4_2:75753238-75753257 Msa0622950:intron 40.0%
TTCTGCAGCACTTACAGTAA+AGG + chr4_2:75753333-75753352 Msa0622950:CDS 40.0%
! GAAGATGGACTCAATGAATG+TGG + chr4_2:75753394-75753413 Msa0622950:CDS 40.0%
TGGTATACTTCCGTGCATTA+AGG + chr4_2:75753414-75753433 Msa0622950:CDS 40.0%
GATGAGAAAGATGCAACTCT+TGG - chr4_2:75753636-75753655 None:intergenic 40.0%
GTTGCATCTTTCTCATCTAG+AGG + chr4_2:75753639-75753658 Msa0622950:CDS 40.0%
TGGATTAAGTCTAACTCAGG+TGG + chr4_2:75753911-75753930 Msa0622950:intron 40.0%
ATCATAACCTGCACTCTTCT+GGG + chr4_2:75754210-75754229 Msa0622950:intron 40.0%
GAATGACTGATGGAAATAGC+CGG + chr4_2:75754232-75754251 Msa0622950:intron 40.0%
! CTGCTCTTTTTACTTCCCTT+GGG - chr4_2:75754299-75754318 None:intergenic 40.0%
! ACTGCTCTTTTTACTTCCCT+TGG - chr4_2:75754300-75754319 None:intergenic 40.0%
AAGGGAAGTAAAAAGAGCAG+TGG + chr4_2:75754299-75754318 Msa0622950:CDS 40.0%
ATCAATGTCTTGTCCTCATG+TGG + chr4_2:75754343-75754362 Msa0622950:CDS 40.0%
! AGATCAGCTTTGGTAACAAC+AGG + chr4_2:75754422-75754441 Msa0622950:CDS 40.0%
! TTTAGGTGAGTTGGGTCTTA+GGG - chr4_2:75754689-75754708 None:intergenic 40.0%
CATCAGCACCCATTTGATAT+CGG + chr4_2:75754916-75754935 Msa0622950:exon 40.0%
ATCAGCACCCATTTGATATC+GGG + chr4_2:75754917-75754936 Msa0622950:exon 40.0%
!! CCTGCATTGATTGCTTTGTT+AGG - chr4_2:75754957-75754976 None:intergenic 40.0%
CCTAACAAAGCAATCAATGC+AGG + chr4_2:75754954-75754973 Msa0622950:three_prime_UTR 40.0%
AGATGCTGTATTATGACCCA+TGG - chr4_2:75755027-75755046 None:intergenic 40.0%
! GTTGCAACTTGTAGTGGTTT+TGG - chr4_2:75755063-75755082 None:intergenic 40.0%
! GTTGTATGACTCTTCAGGTT+TGG - chr4_2:75755137-75755156 None:intergenic 40.0%
ATGAGAACAGTGACAAACGT+TGG + chr4_2:75755161-75755180 Msa0622950:three_prime_UTR 40.0%
ACAGATTTGGAAGCCTAACA+TGG + chr4_2:75755333-75755352 Msa0622950:three_prime_UTR 40.0%
! CAGATGGCAATCATTTTGTG+AGG + chr4_2:75755357-75755376 Msa0622950:three_prime_UTR 40.0%
TGAGGATACCAATAGCTGTT+AGG + chr4_2:75755375-75755394 Msa0622950:three_prime_UTR 40.0%
TGTATGGTCCTAACAGCTAT+TGG - chr4_2:75755386-75755405 None:intergenic 40.0%
TCTTCACTCTTGGGAAGGTA+TGG + chr4_2:75751017-75751036 Msa0622950:intron 45.0%
GGAATGACAGAAACTACCTC+TGG - chr4_2:75751316-75751335 None:intergenic 45.0%
!! CAGTTTTTGAGGAGGGATGA+TGG - chr4_2:75751390-75751409 None:intergenic 45.0%
TGTGTCTATGACGCCTATGA+TGG - chr4_2:75751443-75751462 None:intergenic 45.0%
ATCATAGGCGTCATAGACAC+AGG + chr4_2:75751442-75751461 Msa0622950:CDS 45.0%
GTCATCCGATGAAAATCGGA+TGG + chr4_2:75751630-75751649 Msa0622950:intron 45.0%
CAAACTCCTTTCCACTTGGA+TGG - chr4_2:75752014-75752033 None:intergenic 45.0%
GGTGCTAGATGGTTCCTAAA+AGG + chr4_2:75752083-75752102 Msa0622950:CDS 45.0%
CACACTAAGAACCTCATCCT+TGG + chr4_2:75752116-75752135 Msa0622950:CDS 45.0%
CTCTCAGCTAGAGATGCTAT+TGG + chr4_2:75752161-75752180 Msa0622950:CDS 45.0%
TTGAAGCTGTGTGAGTTCCA+TGG - chr4_2:75752187-75752206 None:intergenic 45.0%
CTCTTGCTAAACCAGAAGCA+AGG - chr4_2:75752250-75752269 None:intergenic 45.0%
!! CTTGCTTCTGGTTTAGCAAG+AGG + chr4_2:75752248-75752267 Msa0622950:CDS 45.0%
TGGCTATCTACAAAGCTTGC+TGG + chr4_2:75752291-75752310 Msa0622950:CDS 45.0%
! GGCTATCTACAAAGCTTGCT+GGG + chr4_2:75752292-75752311 Msa0622950:CDS 45.0%
TCTTTCCACGCAACTTCCAA+AGG + chr4_2:75752464-75752483 Msa0622950:CDS 45.0%
! TGATACCTTTGGAAGTTGCG+TGG - chr4_2:75752472-75752491 None:intergenic 45.0%
!! CCATGGTGCTGTATTCGAAA+CGG - chr4_2:75752537-75752556 None:intergenic 45.0%
ACCATGGCTCATTACAGTTG+CGG + chr4_2:75752550-75752569 Msa0622950:CDS 45.0%
TCTCACGCTAAATCATCCGA+TGG - chr4_2:75752785-75752804 None:intergenic 45.0%
!! GGATTAGTCGGTTCTTGGAT+CGG - chr4_2:75753019-75753038 None:intergenic 45.0%
CTGAATGAAACAATGGCAGC+AGG + chr4_2:75753265-75753284 Msa0622950:CDS 45.0%
GCACTTACAGTAAAGGAAGC+TGG + chr4_2:75753340-75753359 Msa0622950:CDS 45.0%
CTTACAGTAAAGGAAGCTGG+TGG + chr4_2:75753343-75753362 Msa0622950:CDS 45.0%
TATGCACAGCGTCATGAAGA+TGG + chr4_2:75753379-75753398 Msa0622950:CDS 45.0%
! ACAGTTGGAGACAAGGTACT+AGG - chr4_2:75753666-75753685 None:intergenic 45.0%
CTTTAGCACAGTTGGAGACA+AGG - chr4_2:75753673-75753692 None:intergenic 45.0%
CTTGTCTCCAACTGTGCTAA+AGG + chr4_2:75753671-75753690 Msa0622950:CDS 45.0%
GGCTATACCTTTAGCACAGT+TGG - chr4_2:75753681-75753700 None:intergenic 45.0%
! GAAAGAAAAGCACAATCGGC+CGG + chr4_2:75753809-75753828 Msa0622950:intron 45.0%
CATCATAACCTGCACTCTTC+TGG + chr4_2:75754209-75754228 Msa0622950:intron 45.0%
! ACTCTTCTGGGAATGACTGA+TGG + chr4_2:75754222-75754241 Msa0622950:intron 45.0%
! CTCTTTTTACTTCCCTTGGG+TGG - chr4_2:75754296-75754315 None:intergenic 45.0%
AAAGCTGATCTTATGGCTGC+AGG - chr4_2:75754413-75754432 None:intergenic 45.0%
TGCAGCCATAAGATCAGCTT+TGG + chr4_2:75754412-75754431 Msa0622950:CDS 45.0%
TTAGTGCTCTCTGAGCCTTA+AGG + chr4_2:75754643-75754662 Msa0622950:intron 45.0%
! TTAGGTGAGTTGGGTCTTAG+GGG - chr4_2:75754688-75754707 None:intergenic 45.0%
! GTTTAGGTGAGTTGGGTCTT+AGG - chr4_2:75754690-75754709 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr4_2:75754728-75754747 Msa0622950:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr4_2:75754729-75754748 Msa0622950:intron 45.0%
! AAAAGTGCAGCCTCTCAAAG+CGG + chr4_2:75754849-75754868 Msa0622950:intron 45.0%
! GGAGGCCTTATATCAGAAGA+AGG + chr4_2:75754879-75754898 Msa0622950:CDS 45.0%
TCAGCACCCATTTGATATCG+GGG + chr4_2:75754918-75754937 Msa0622950:exon 45.0%
TGTCCTCCCCGATATCAAAT+GGG - chr4_2:75754927-75754946 None:intergenic 45.0%
GACCCATGGAACATAGGAAT+TGG - chr4_2:75755013-75755032 None:intergenic 45.0%
GATTGCCATCTGTCCATGTT+AGG - chr4_2:75755349-75755368 None:intergenic 45.0%
GCTAGAGATGCTATTGGCCA+TGG + chr4_2:75752167-75752186 Msa0622950:CDS 50.0%
!! GCTTCTGGTTTAGCAAGAGG+AGG + chr4_2:75752251-75752270 Msa0622950:CDS 50.0%
!! AGGAGCACCTTTAGCTCACT+TGG + chr4_2:75752271-75752290 Msa0622950:CDS 50.0%
GCATCAGTACAGTGTCCAAC+AGG - chr4_2:75752323-75752342 None:intergenic 50.0%
CAACGCGACACGATAGCAAT+TGG + chr4_2:75752440-75752459 Msa0622950:CDS 50.0%
CCGTTTCGAATACAGCACCA+TGG + chr4_2:75752534-75752553 Msa0622950:CDS 50.0%
TTGCGGCCACTACAATCGAT+AGG + chr4_2:75752567-75752586 Msa0622950:CDS 50.0%
CAGGGACAGTCCATTGACAA+TGG + chr4_2:75752704-75752723 Msa0622950:intron 50.0%
TCCTATAGAGGCCTTGCTTC+TGG + chr4_2:75753036-75753055 Msa0622950:intron 50.0%
ACCAGAAGCAAGGCCTCTAT+AGG - chr4_2:75752240-75752259 None:intergenic 50.0%
!! GCCTTGCTTCTGGTTTAGCA+CGG + chr4_2:75752246-75752265 Msa0622950:CDS 50.0%
ACCGTGCTAAACCAGAAGCA+AGG - chr4_2:75753050-75753069 None:intergenic 50.0%
!! TTGCTTCTGGTTTAGCACGG+TGG + chr4_2:75753049-75753068 Msa0622950:intron 50.0%
GTAAAGGAAGCTGGTGGAGT+TGG + chr4_2:75753349-75753368 Msa0622950:CDS 50.0%
GTGGAAGGTTTCCAACTGCA+AGG + chr4_2:75753571-75753590 Msa0622950:intron 50.0%
GGAAAACTCAGCCTTGCAGT+TGG - chr4_2:75753585-75753604 None:intergenic 50.0%
! AGTCATTCCCAGAAGAGTGC+AGG - chr4_2:75754220-75754239 None:intergenic 50.0%
TGCAGCCAAAATGTCCACAC+CGG - chr4_2:75754270-75754289 None:intergenic 50.0%
TTTGGCTGCATTTCCACCCA+AGG + chr4_2:75754280-75754299 Msa0622950:CDS 50.0%
TTGGCTGCATTTCCACCCAA+GGG + chr4_2:75754281-75754300 Msa0622950:CDS 50.0%
ATGTCTTGTCCTCATGTGGC+AGG + chr4_2:75754347-75754366 Msa0622950:CDS 50.0%
! AGGTGACCAAGTTGGGTGTT+TGG - chr4_2:75754393-75754412 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr4_2:75754730-75754749 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr4_2:75754727-75754746 Msa0622950:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr4_2:75754733-75754752 Msa0622950:intron 50.0%
TGTAACCGACCCCACTTAGT+GGG - chr4_2:75754741-75754760 None:intergenic 50.0%
ATGTAACCGACCCCACTTAG+TGG - chr4_2:75754742-75754761 None:intergenic 50.0%
ACTAAGTGGGGTCGGTTACA+TGG + chr4_2:75754741-75754760 Msa0622950:intron 50.0%
! TCCATCAGTTCCGCTTTGAG+AGG - chr4_2:75754862-75754881 None:intergenic 50.0%
TCTCAAAGCGGAACTGATGG+AGG + chr4_2:75754861-75754880 Msa0622950:CDS 50.0%
!! GGGTGCTGATGCCTTATTTG+TGG - chr4_2:75754907-75754926 None:intergenic 50.0%
GTGTCCTCCCCGATATCAAA+TGG - chr4_2:75754928-75754947 None:intergenic 50.0%
GGAAGCCTAACATGGACAGA+TGG + chr4_2:75755341-75755360 Msa0622950:three_prime_UTR 50.0%
CACACAGCTTCAACAGCAGC+TGG + chr4_2:75752194-75752213 Msa0622950:CDS 55.0%
GCCGCAACTGTAATGAGCCA+TGG - chr4_2:75752554-75752573 None:intergenic 55.0%
TGGATCACGTGCAATGCGCT+CGG - chr4_2:75752765-75752784 None:intergenic 55.0%
GCGCATTGCACGTGATCCAT+CGG + chr4_2:75752766-75752785 Msa0622950:CDS 55.0%
! AGCACCCGGTGTGGACATTT+TGG + chr4_2:75754262-75754281 Msa0622950:CDS 55.0%
GCAGCCAAAATGTCCACACC+GGG - chr4_2:75754269-75754288 None:intergenic 55.0%
GCTGCTATTCCTGCCACATG+AGG - chr4_2:75754359-75754378 None:intergenic 55.0%
TGGCTGCAGGTGACCAAGTT+GGG - chr4_2:75754400-75754419 None:intergenic 55.0%
ATGGCTGCAGGTGACCAAGT+TGG - chr4_2:75754401-75754420 None:intergenic 55.0%
CCAGGGTCAGACAAGCCTTA+AGG - chr4_2:75754661-75754680 None:intergenic 55.0%
CCTTAAGGCTTGTCTGACCC+TGG + chr4_2:75754658-75754677 Msa0622950:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr4_2:75754735-75754754 None:intergenic 55.0%
GCCTCTCAAAGCGGAACTGA+TGG + chr4_2:75754858-75754877 Msa0622950:intron 55.0%
GCACCCATTTGATATCGGGG+AGG + chr4_2:75754921-75754940 Msa0622950:exon 55.0%
TTGATATCGGGGAGGACACG+TGG + chr4_2:75754929-75754948 Msa0622950:exon 55.0%
GTCAGCAAATCGGCGTCGTC+CGG + chr4_2:75751533-75751552 Msa0622950:intron 60.0%
! GCTTGCTGGGACGTTCCTGT+TGG + chr4_2:75752305-75752324 Msa0622950:CDS 60.0%
TAGCCGGACATAGCAGCACC+CGG + chr4_2:75754248-75754267 Msa0622950:intron 60.0%
!! ACACCGGGTGCTGCTATGTC+CGG - chr4_2:75754254-75754273 None:intergenic 60.0%
TGGGTCTTAGGGGCTCACCA+GGG - chr4_2:75754678-75754697 None:intergenic 60.0%
TTGGGTCTTAGGGGCTCACC+AGG - chr4_2:75754679-75754698 None:intergenic 60.0%
GGACATAGCAGCACCCGGTG+TGG + chr4_2:75754253-75754272 Msa0622950:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 75750680 75755569 75750680 ID=Msa0622950;Name=Msa0622950
chr4_2 mRNA 75750680 75755569 75750680 ID=Msa0622950-mRNA-1;Parent=Msa0622950;Name=Msa0622950-mRNA-1;_AED=0.18;_eAED=0.18;_QI=27|1|1|1|1|1|10|637|620
chr4_2 exon 75750680 75750832 75750680 ID=Msa0622950-mRNA-1:exon:22989;Parent=Msa0622950-mRNA-1
chr4_2 exon 75750942 75751033 75750942 ID=Msa0622950-mRNA-1:exon:22990;Parent=Msa0622950-mRNA-1
chr4_2 exon 75751125 75751222 75751125 ID=Msa0622950-mRNA-1:exon:22991;Parent=Msa0622950-mRNA-1
chr4_2 exon 75751308 75751463 75751308 ID=Msa0622950-mRNA-1:exon:22992;Parent=Msa0622950-mRNA-1
chr4_2 exon 75751961 75752634 75751961 ID=Msa0622950-mRNA-1:exon:22993;Parent=Msa0622950-mRNA-1
chr4_2 exon 75752707 75752798 75752707 ID=Msa0622950-mRNA-1:exon:22994;Parent=Msa0622950-mRNA-1
chr4_2 exon 75753243 75753485 75753243 ID=Msa0622950-mRNA-1:exon:22995;Parent=Msa0622950-mRNA-1
chr4_2 exon 75753578 75753692 75753578 ID=Msa0622950-mRNA-1:exon:22996;Parent=Msa0622950-mRNA-1
chr4_2 exon 75754251 75754443 75754251 ID=Msa0622950-mRNA-1:exon:22997;Parent=Msa0622950-mRNA-1
chr4_2 exon 75754859 75755569 75754859 ID=Msa0622950-mRNA-1:exon:22998;Parent=Msa0622950-mRNA-1
chr4_2 five_prime_UTR 75750680 75750706 75750680 ID=Msa0622950-mRNA-1:five_prime_utr;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75750707 75750832 75750707 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75750942 75751033 75750942 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75751125 75751222 75751125 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75751308 75751463 75751308 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75751961 75752634 75751961 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75752707 75752798 75752707 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75753243 75753485 75753243 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75753578 75753692 75753578 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75754251 75754443 75754251 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 CDS 75754859 75754932 75754859 ID=Msa0622950-mRNA-1:cds;Parent=Msa0622950-mRNA-1
chr4_2 three_prime_UTR 75754933 75755569 75754933 ID=Msa0622950-mRNA-1:three_prime_utr;Parent=Msa0622950-mRNA-1
Gene Sequence

>Msa0622950

ATGATGGAAACTAATTCAGGAAACAAGAGATGTGCTAGAAAGGTTCAATTGCTTGTAACTTCAGCTCTTCTTTTACTGCAAAGCTTTCTGATCATCCCCGAGATATTTGCAGAAGAATCAAGCTCTGTGCATATTGTATACATGGGAGAAAAGATATATCATAATCCAGAAACTGCTAAAAAGTATCACCACAAAATGTTATCTTCACTCTTGGGAAGCAAAGAAGATGCAAAGAATTCACTTCTTTATAGCTATAAACATGGATTTTCAGGGTTTGCTGCTAGAATGACAAAGTCCCAAGCAGAAGATATAGCAAAGTTTCCAGAGGTAGTTTCTGTCATTCCAAATGGCATTCACAAACTTCACACAACTAGAAGTTGGGACTTCATTGGGGTCCATCATCCCTCCTCAAAAACTGTTTTCACTGAAAGCAACTTAGGTCAAGGAACCATCATAGGCGTCATAGACACAGGCATTTGGCCAGAGTCTGCAAGTTTCAATGATGAAGCAATGGGAAAAATTCCATCCAAGTGGAAAGGAGTTTGTCAAGTTGGAGAAAAATTTAACTCCACAAACTGTAACAAGAAGATCATTGGTGCTAGATGGTTCCTAAAAGGAATAACTGATCACACTAAGAACCTCATCCTTGGAAACAATGACACTACAGAATATCTCTCAGCTAGAGATGCTATTGGCCATGGAACTCACACAGCTTCAACAGCAGCTGGATATTATGTAGAAAATGCAAATTATAGAGGCCTTGCTTCTGGTTTAGCAAGAGGAGGAGCACCTTTAGCTCACTTGGCTATCTACAAAGCTTGCTGGGACGTTCCTGTTGGACACTGTACTGATGCTGATATCCTCAAAGCATTTGACATGGCTATACACGATGGTGTAGATGTCTTAACTGTTTCTCTTGGCATTGGCATCCCTTTGTTTTCGTATGTTGATCAACGCGACACGATAGCAATTGGTTCTTTCCACGCAACTTCCAAAGGTATCACAGTTGTTTCTTCAGCTGGAAATTCTGGTCCTATTTCTCAAACCGTTTCGAATACAGCACCATGGCTCATTACAGTTGCGGCCACTACAATCGATAGGACTTTTCCAACAGCCATTACACTTGGAAATAACCTTACTTTGTGGGGACAGTCCATTGACAATGGAAAACACTCTCTTGGATTTGTCGGGCTCACATACTCCGAGCGCATTGCACGTGATCCATCGGATGATTTAGCTAAGGATTGTCAGTCTGGAAGTCTGAATGAAACAATGGCAGCAGGAAAAATTGTTCTATGCTTTTCAGTATCAGATCAACAAGATATTGTTTCTGCAGCACTTACAGTAAAGGAAGCTGGTGGAGTTGGACTAATATATGCACAGCGTCATGAAGATGGACTCAATGAATGTGGTATACTTCCGTGCATTAAGGTAGATTATGAAGCAGGGACACAACTGTTAACCTATATTAGAAGAGCAAGGTTTCCAACTGCAAGGCTGAGTTTTCCAAAGACTGTTATAGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCTTGTCTCCAACTGTGCTAAAGCCGGACATAGCAGCACCCGGTGTGGACATTTTGGCTGCATTTCCACCCAAGGGAAGTAAAAAGAGCAGTGGATTCATATTCTTATCTGGAACATCAATGTCTTGTCCTCATGTGGCAGGAATAGCAGCACTCATAAAATCCAAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCCTCTCAAAGCGGAACTGATGGAGGCCTTATATCAGAAGAAGGTTCCACAAATAAGGCATCAGCACCCATTTGA
Protein sequence

>Msa0622950

MMETNSGNKRCARKVQLLVTSALLLLQSFLIIPEIFAEESSSVHIVYMGEKIYHNPETAKKYHHKMLSSLLGSKEDAKNSLLYSYKHGFSGFAARMTKSQAEDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHPSSKTVFTESNLGQGTIIGVIDTGIWPESASFNDEAMGKIPSKWKGVCQVGEKFNSTNCNKKIIGARWFLKGITDHTKNLILGNNDTTEYLSARDAIGHGTHTASTAAGYYVENANYRGLASGLARGGAPLAHLAIYKACWDVPVGHCTDADILKAFDMAIHDGVDVLTVSLGIGIPLFSYVDQRDTIAIGSFHATSKGITVVSSAGNSGPISQTVSNTAPWLITVAATTIDRTFPTAITLGNNLTLWGQSIDNGKHSLGFVGLTYSERIARDPSDDLAKDCQSGSLNETMAAGKIVLCFSVSDQQDIVSAALTVKEAGGVGLIYAQRHEDGLNECGILPCIKVDYEAGTQLLTYIRRARFPTARLSFPKTVIGKWISPRVASFSSRGPSTLSPTVLKPDIAAPGVDILAAFPPKGSKKSSGFIFLSGTSMSCPHVAGIAALIKSKHPTWSPAAIRSALVTTASQSGTDGGLISEEGSTNKASAPI*