AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1043690


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1043690 MtrunA17_Chr1g0155331 89.754 244 2 1 252 472 1 244 6.78e-157 444
Msa1043690 MtrunA17_Chr2g0298841 88.934 244 4 1 252 472 1 244 7.35e-155 439
Msa1043690 MtrunA17_Chr4g0002321 80.083 241 25 1 255 472 3 243 2.49e-139 400
Msa1043690 MtrunA17_Chr7g0237701 43.590 234 110 1 261 472 13 246 5.06e-62 202
Msa1043690 MtrunA17_Chr1g0155311 98.361 61 1 0 402 462 2 62 8.03e-39 135
Msa1043690 MtrunA17_Chr4g0014311 34.426 122 63 2 28 132 129 250 5.08e-14 72.4
Msa1043690 MtrunA17_Chr5g0444831 37.037 108 65 2 27 132 40 146 3.02e-12 65.1
Msa1043690 MtrunA17_Chr8g0365271 36.449 107 65 2 28 132 53 158 6.68e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1043690 AT3G13580.5 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.4 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.2 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.3 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.1 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.7 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.8 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.6 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT3G13580.9 76.230 244 35 1 252 472 1 244 3.14e-134 387
Msa1043690 AT2G01250.1 77.917 240 30 1 256 472 3 242 7.23e-133 384
Msa1043690 AT2G44120.1 76.667 240 33 1 256 472 3 242 2.03e-131 380
Msa1043690 AT2G44120.2 76.667 240 33 1 256 472 8 247 3.22e-131 380
Msa1043690 AT2G01250.2 72.781 169 23 1 256 401 3 171 1.47e-77 240
Msa1043690 AT1G80750.1 43.320 247 114 5 252 472 1 247 6.98e-54 181

Find 112 sgRNAs with CRISPR-Local

Find 761 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAAATCTTCCTTGATTT+TGG 0.006132 7_2:-1875496 None:intergenic
CTAAGCTCTTGTTCATTATT+AGG 0.173523 7_2:+1875340 Msa1043690:CDS
TGCTTCTTCAAAACGGATTC+AGG 0.216526 7_2:-1874498 None:intergenic
TTAAAGCAAAACGGGGATTA+AGG 0.255981 7_2:-1877887 None:intergenic
GAAGGATGAGATGGAGTTTA+AGG 0.268601 7_2:+1865800 None:intergenic
ACCTTCACACAGACCAGTTT+TGG 0.306158 7_2:-1873266 None:intergenic
CCCTGACGCTCTTCAGATTA+GGG 0.318959 7_2:-1877305 None:intergenic
GATCTTTAATATTTAGTTCA+TGG 0.321508 7_2:+1877945 Msa1043690:three_prime_UTR
TTATCCAATGGGCAGGTTCT+TGG 0.334500 7_2:+1877602 Msa1043690:intron
GTCAAGGATGAATAAGTAAA+AGG 0.346460 7_2:-1877997 None:intergenic
AGGAGTTGATTCAAGCAATA+AGG 0.347890 7_2:+1872890 Msa1043690:CDS
AGTAAGCTTTAAAACTGAAT+TGG 0.358565 7_2:-1878024 None:intergenic
TATCCAATGGGCAGGTTCTT+GGG 0.364373 7_2:+1877603 Msa1043690:intron
TGATGTTAGTGTTCAGTCAT+TGG 0.375399 7_2:+1872974 Msa1043690:CDS
GAGAAAATGAAACTAGGGTT+TGG 0.389890 7_2:-1874278 None:intergenic
CTGAAACAAGGAAACTCATT+TGG 0.390452 7_2:+1874586 Msa1043690:CDS
TCCCTGACGCTCTTCAGATT+AGG 0.391787 7_2:-1877306 None:intergenic
GACTGCAAAGGAGCCAAAAC+TGG 0.400490 7_2:+1873253 Msa1043690:CDS
AAGGTGGTGATGCTGGAAAC+AGG 0.400679 7_2:+1877771 Msa1043690:CDS
AGCAGAAAAGGAACGAAGAA+TGG 0.407682 7_2:+1874517 Msa1043690:CDS
ACCCTAATCTGAAGAGCGTC+AGG 0.410603 7_2:+1877304 Msa1043690:CDS
AGCCGCGCCAATTGCGATAC+AGG 0.416419 7_2:-1872461 None:intergenic
ATTTAGTTCATGGCCTTGCC+TGG 0.417457 7_2:+1877955 Msa1043690:three_prime_UTR
ATGAACAAGAGCTTAGCTTC+AGG 0.424828 7_2:-1875333 None:intergenic
TTTCTTCTTCATACCACCTA+GGG 0.429478 7_2:-1877732 None:intergenic
AAGTGCTAAGGGTTCGAAAC+TGG 0.434770 7_2:+1873061 Msa1043690:CDS
AGACAACTCAATCATTGAAC+AGG 0.442244 7_2:+1877383 Msa1043690:CDS
ATGCCAACCTGTATCGCAAT+TGG 0.461259 7_2:+1872454 Msa1043690:CDS
CCTGTCATTGATGTTGATGT+TGG 0.466546 7_2:+1873215 Msa1043690:CDS
TGAACAAGAGCTTAGCTTCA+GGG 0.470751 7_2:-1875332 None:intergenic
GACTCCTACTAGCAAAACTC+TGG 0.471293 7_2:+1872941 Msa1043690:CDS
AGCAATAAGGATGATGTTGA+TGG 0.475183 7_2:+1872903 Msa1043690:CDS
AGAAAATGAAACTAGGGTTT+GGG 0.482403 7_2:-1874277 None:intergenic
TATGTGGAAGGTGGTGATGC+TGG 0.489381 7_2:+1877764 Msa1043690:CDS
ATTGGTGAAGAAGCAGGAAC+AGG 0.496788 7_2:+1874542 Msa1043690:CDS
AACCCTGTGGAGCATGTTCA+CGG 0.497828 7_2:-1877259 None:intergenic
TTGATCTACAAGAGGGGCTA+CGG 0.499583 7_2:+1877330 Msa1043690:CDS
CTACCGTGAACATGCTCCAC+AGG 0.502553 7_2:+1877256 Msa1043690:CDS
GGGTACCCGTATGTAACATA+AGG 0.504429 7_2:-1877285 None:intergenic
TTTATGTAGGAAACTGTTGA+AGG 0.505009 7_2:+1872870 Msa1043690:intron
GCAGAAAAGGAACGAAGAAT+GGG 0.509066 7_2:+1874518 Msa1043690:CDS
TGTGCCTGCTTCAAGTGCTA+AGG 0.509345 7_2:+1873049 Msa1043690:CDS
GGGGCTACGGCAAAGTTGAC+AGG 0.514631 7_2:+1877343 Msa1043690:CDS
ATGGGCATTGGTGAAGAAGC+AGG 0.518449 7_2:+1874536 Msa1043690:CDS
GTTGAGCCTTATGTTACATA+CGG 0.518747 7_2:+1877279 Msa1043690:CDS
ATGGAGAGAAAATGAAACTA+GGG 0.525068 7_2:-1874283 None:intergenic
AGGGGAGCTTTGAGCTTGAA+AGG 0.525834 7_2:-1877713 None:intergenic
GGTTCGAAACTGGTGTCTGA+TGG 0.530932 7_2:+1873071 Msa1043690:CDS
GTCGAAAGAGGAAGTGAAAA+CGG 0.538106 7_2:+1874470 Msa1043690:CDS
ACGCTATGGACCCAAAATCA+AGG 0.543591 7_2:+1875485 Msa1043690:CDS
GCTAGCACACGAGGAGGAGG+AGG 0.544186 7_2:+1872642 Msa1043690:intron
GTGCCTGCTTCAAGTGCTAA+GGG 0.545971 7_2:+1873050 Msa1043690:CDS
AAAAGAAATCATTATGTGGA+AGG 0.546296 7_2:+1877752 Msa1043690:CDS
TTGTGTGAGATTAATTATCA+AGG 0.551506 7_2:+1877849 Msa1043690:three_prime_UTR
GATGGAGAGAAAATGAAACT+AGG 0.553699 7_2:-1874284 None:intergenic
GAACCCTTAGCACTTGAAGC+AGG 0.554485 7_2:-1873053 None:intergenic
GATTTGAAGGATGTCGAAAG+AGG 0.555198 7_2:+1874458 Msa1043690:intron
TCAACAGCTCTCTTTCCCAA+TGG 0.560062 7_2:-1873182 None:intergenic
TTGTTCATTATTAGGATCAG+AGG 0.561223 7_2:+1875348 Msa1043690:CDS
TGTTGATGTTGGTGATAGTG+TGG 0.563932 7_2:+1873226 Msa1043690:CDS
CTTTGAGCTTGAAAGGCCAC+AGG 0.568038 7_2:-1877706 None:intergenic
TACTAGCAAAACTCTGGGAA+AGG 0.568886 7_2:+1872947 Msa1043690:CDS
AAACTGAATTGGCAAAGTCA+AGG 0.571654 7_2:-1878013 None:intergenic
ACAGCTAGCACACGAGGAGG+AGG 0.573542 7_2:+1872639 Msa1043690:intron
GAAGAAAAGAAATCATTATG+TGG 0.573776 7_2:+1877748 Msa1043690:CDS
GGTGTCTGATGGAAATGCTA+AGG 0.573957 7_2:+1873082 Msa1043690:CDS
TGTTCATTATTAGGATCAGA+GGG 0.574120 7_2:+1875349 Msa1043690:CDS
TGTGATGGATTGAGCACAAA+GGG 0.579403 7_2:+1873017 Msa1043690:CDS
GCGCCAATTGCGATACAGGT+TGG 0.583988 7_2:-1872457 None:intergenic
CCAACATCAACATCAATGAC+AGG 0.589618 7_2:-1873215 None:intergenic
GAAGCGTGAAGCTAAACTCA+AGG 0.589756 7_2:+1875293 Msa1043690:intron
AGAAATCATTATGTGGAAGG+TGG 0.590613 7_2:+1877755 Msa1043690:CDS
ATTGTGCTAGGTGGTTGTGA+TGG 0.595808 7_2:+1873002 Msa1043690:CDS
CTTGCCGCAGTAGATGGAGA+TGG 0.596202 7_2:-1874302 None:intergenic
AGAAGAAGAGAGCTGAAACA+AGG 0.596539 7_2:+1874574 Msa1043690:CDS
TTGAGCCTTATGTTACATAC+GGG 0.597990 7_2:+1877280 Msa1043690:CDS
TAGTGTGGCTTCGACTGCAA+AGG 0.601434 7_2:+1873241 Msa1043690:CDS
CTCTCCATCTCCATCTACTG+CGG 0.604201 7_2:+1874298 Msa1043690:CDS
TTGTTTGCCTCTCTGAAGTG+AGG 0.607151 7_2:-1877680 None:intergenic
GGGCAGGTTCTTGGGAAGCA+CGG 0.607398 7_2:+1877611 Msa1043690:intron
TTCTTCTTCATACCACCTAG+GGG 0.609907 7_2:-1877731 None:intergenic
TTCAAGCTCAAAGCTCCCCT+AGG 0.610220 7_2:+1877716 Msa1043690:CDS
AAGGAACGAAGAATGGGCAT+TGG 0.610396 7_2:+1874524 Msa1043690:CDS
TCATTGGACGATATTGTGCT+AGG 0.610409 7_2:+1872990 Msa1043690:CDS
GTGTCTGATGGAAATGCTAA+GGG 0.614427 7_2:+1873083 Msa1043690:CDS
CAGGGAATTGATCTACAAGA+GGG 0.615110 7_2:+1877323 Msa1043690:CDS
GTTAGCTGATCAAAAGCCAC+TGG 0.615976 7_2:+1872690 Msa1043690:CDS
TGGTCGTTACACTTATGCCA+TGG 0.621957 7_2:-1872539 None:intergenic
GAGAGGCAAACAACTTCCTG+TGG 0.626203 7_2:+1877690 Msa1043690:CDS
ACATCAACGAACTCATCAGA+AGG 0.630261 7_2:+1877801 Msa1043690:CDS
AACCTGTATCGCAATTGGCG+CGG 0.636010 7_2:+1872459 Msa1043690:CDS
TCAGGGAATTGATCTACAAG+AGG 0.639447 7_2:+1877322 Msa1043690:CDS
CGTGAAGCTAAACTCAAGGG+TGG 0.639969 7_2:+1875297 Msa1043690:intron
CATCTCCATCTACTGCGGCA+AGG 0.640380 7_2:+1874303 Msa1043690:CDS
ACTCCTACTAGCAAAACTCT+GGG 0.641277 7_2:+1872942 Msa1043690:CDS
AAGCAGATTATAGATCTCCA+TGG 0.641398 7_2:+1872522 Msa1043690:CDS
AGGTGGTGATGCTGGAAACA+GGG 0.642090 7_2:+1877772 Msa1043690:CDS
TACCGTGAACATGCTCCACA+GGG 0.645382 7_2:+1877257 Msa1043690:CDS
AAGCTCAAAGCTCCCCTAGG+TGG 0.657354 7_2:+1877719 Msa1043690:CDS
ATTTGTACAGCTAGCACACG+AGG 0.657763 7_2:+1872633 Msa1043690:intron
ATTCACGAGATACTAACAGT+TGG 0.659550 7_2:+1877656 Msa1043690:CDS
AAGCGTGAAGCTAAACTCAA+GGG 0.663061 7_2:+1875294 Msa1043690:intron
TATGGATGAAGGATCTGCAG+AGG 0.668999 7_2:+1873133 Msa1043690:intron
CCCTAATCTGAAGAGCGTCA+GGG 0.672345 7_2:+1877305 Msa1043690:CDS
TAACATAAGGCTCAACCCTG+TGG 0.679817 7_2:-1877272 None:intergenic
TTGGACGATATTGTGCTAGG+TGG 0.693786 7_2:+1872993 Msa1043690:CDS
TTGTGATGGATTGAGCACAA+AGG 0.710169 7_2:+1873016 Msa1043690:CDS
AGGGAATTGATCTACAAGAG+GGG 0.717541 7_2:+1877324 Msa1043690:CDS
TGTACAGCTAGCACACGAGG+AGG 0.720972 7_2:+1872636 Msa1043690:intron
GACGTGACTCTCATTCATCG+AGG 0.744738 7_2:-1865850 None:intergenic
AGTTGGTCCTCACTTCAGAG+AGG 0.754549 7_2:+1877673 Msa1043690:CDS
GAAAGAGGAAGTGAAAACGG+TGG 0.767520 7_2:+1874473 Msa1043690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTAAAAATTTATT+TGG + chr7_2:1866749-1866768 Msa1043690:intron 0.0%
!!! TTAATTTTTAAATTTTTTAT+GGG - chr7_2:1867097-1867116 None:intergenic 0.0%
!!! ATTAATTTTTAAATTTTTTA+TGG - chr7_2:1867098-1867117 None:intergenic 0.0%
!! ATTAATATTATTATAAAAAT+TGG - chr7_2:1867890-1867909 None:intergenic 0.0%
!!! ATTTTTTAATAACTCTTAAT+TGG + chr7_2:1866803-1866822 Msa1043690:intron 10.0%
!! ATTATAAAAATTGGAAAATA+TGG - chr7_2:1867881-1867900 None:intergenic 10.0%
!!! AATTTATATTTTCAAATAGA+AGG - chr7_2:1868322-1868341 None:intergenic 10.0%
!!! TATTTTCCATTTAAATATTA+AGG - chr7_2:1869746-1869765 None:intergenic 10.0%
!!! GTAAAAAAATTCTTATTTTA+TGG + chr7_2:1871033-1871052 Msa1043690:intron 10.0%
!! CATATATATAAATCATAAAA+AGG - chr7_2:1872810-1872829 None:intergenic 10.0%
!!! CTTTTTATGATTTATATATA+TGG + chr7_2:1872808-1872827 Msa1043690:intron 10.0%
!!! AATACTTTTAATTCAATTAT+AGG + chr7_2:1873833-1873852 Msa1043690:intron 10.0%
!!! ATACTTTTAATTCAATTATA+GGG + chr7_2:1873834-1873853 Msa1043690:intron 10.0%
!! TTAGAATATTAAAAATACTT+TGG - chr7_2:1874030-1874049 None:intergenic 10.0%
!!! AATTTTGATTATGTAATTTT+AGG + chr7_2:1874662-1874681 Msa1043690:intron 10.0%
!!! TTATTGTTGTTTTAATTAAT+GGG + chr7_2:1875438-1875457 Msa1043690:intron 10.0%
!!! GAATTTTAAAGAATTCATAT+TGG - chr7_2:1866243-1866262 None:intergenic 15.0%
!! AAATTAAGAAAAAAATTGGA+GGG - chr7_2:1866732-1866751 None:intergenic 15.0%
!! AAAATTAAGAAAAAAATTGG+AGG - chr7_2:1866733-1866752 None:intergenic 15.0%
!!! TGACTTTTTATCAATAAAAT+TGG + chr7_2:1866774-1866793 Msa1043690:intron 15.0%
!!! AGACAAACTATAAATTTTTT+TGG + chr7_2:1867440-1867459 Msa1043690:intron 15.0%
!! ATCTTAACAAATTATTTCAT+TGG - chr7_2:1867797-1867816 None:intergenic 15.0%
!!! TAGCAACATTTATATTATTT+TGG + chr7_2:1869679-1869698 Msa1043690:intron 15.0%
!! TTATTTCAAAATCAAGATAA+TGG + chr7_2:1870637-1870656 Msa1043690:intron 15.0%
!!! CAATTGTTTAATTTAATTTG+TGG + chr7_2:1870739-1870758 Msa1043690:intron 15.0%
!! ATAATTTCACAAATAGAAAT+GGG - chr7_2:1870861-1870880 None:intergenic 15.0%
!! AATAATTTCACAAATAGAAA+TGG - chr7_2:1870862-1870881 None:intergenic 15.0%
!! ACAAAATTCATAAATCAAAA+AGG - chr7_2:1871015-1871034 None:intergenic 15.0%
!!! AAAAATTCTTATTTTATGGA+TGG + chr7_2:1871037-1871056 Msa1043690:intron 15.0%
!!! ATTTTGATTTTTATTGAAGT+TGG + chr7_2:1871320-1871339 Msa1043690:intron 15.0%
!!! TTTTGATTTTTATTGAAGTT+GGG + chr7_2:1871321-1871340 Msa1043690:intron 15.0%
!!! ACAATTTAATGAATTTTTGT+AGG - chr7_2:1871698-1871717 None:intergenic 15.0%
!! AATACATTAGATAATTCAAA+TGG - chr7_2:1873490-1873509 None:intergenic 15.0%
!! AAATCGAATAAACATATAAA+TGG - chr7_2:1873566-1873585 None:intergenic 15.0%
!!! TGCTTTATTTTTTTAATAGT+AGG - chr7_2:1873860-1873879 None:intergenic 15.0%
!! AAGATAGTATTTATATCTTA+TGG - chr7_2:1874007-1874026 None:intergenic 15.0%
!!! AAACTAATATGTTTTAGAAT+TGG + chr7_2:1874093-1874112 Msa1043690:intron 15.0%
!!! GTATAAATTAAAAAGGTATA+TGG - chr7_2:1875224-1875243 None:intergenic 15.0%
!! AAATAATAAATCAATACTGT+AGG - chr7_2:1875383-1875402 None:intergenic 15.0%
!!! GTTATTGTTGTTTTAATTAA+TGG + chr7_2:1875437-1875456 Msa1043690:intron 15.0%
!! AATAACAAAATATTATGCAT+TGG - chr7_2:1876482-1876501 None:intergenic 15.0%
!!! CAAATAATTTTATTTAGAAG+AGG - chr7_2:1876505-1876524 None:intergenic 15.0%
!!! AACTTATTTTATGTTACATA+CGG + chr7_2:1876604-1876623 Msa1043690:intron 15.0%
!!! TACTTCTTTTTATTTTCTTA+CGG + chr7_2:1876795-1876814 Msa1043690:intron 15.0%
!!! ATAATATTTTAAAGCAAAAC+GGG - chr7_2:1877898-1877917 None:intergenic 15.0%
!!! GATAATATTTTAAAGCAAAA+CGG - chr7_2:1877899-1877918 None:intergenic 15.0%
!! GAATATAATATTAACGTGTA+AGG + chr7_2:1866203-1866222 Msa1043690:intron 20.0%
!!! TCATTCATTTTTAACTTCAA+TGG - chr7_2:1866267-1866286 None:intergenic 20.0%
!! TTGAATAATAAGGGTAAATA+TGG - chr7_2:1866589-1866608 None:intergenic 20.0%
!! GCAATTGAAATGTTTAAATA+CGG + chr7_2:1866915-1866934 Msa1043690:intron 20.0%
!!! ATTTTAACTAAACAAAAGCT+TGG - chr7_2:1867259-1867278 None:intergenic 20.0%
!!! AAGATATTTCTATATGTTTG+AGG + chr7_2:1867752-1867771 Msa1043690:intron 20.0%
!!! ACCATTTAATTTCAATTACA+TGG + chr7_2:1868116-1868135 Msa1043690:intron 20.0%
!!! TTATATTTTCAAATAGAAGG+AGG - chr7_2:1868319-1868338 None:intergenic 20.0%
!! TGTTGAGAAAATTAAACTTT+GGG - chr7_2:1868358-1868377 None:intergenic 20.0%
!! ATGTTGAGAAAATTAAACTT+TGG - chr7_2:1868359-1868378 None:intergenic 20.0%
!!! TTTAATTTTCTCAACATCAA+AGG + chr7_2:1868362-1868381 Msa1043690:intron 20.0%
!! TTGATCATATCTTAAACTTA+TGG + chr7_2:1868500-1868519 Msa1043690:intron 20.0%
!!! ATGATTTTTTTAGAGTTAAG+TGG + chr7_2:1868637-1868656 Msa1043690:intron 20.0%
!! TCCATTTAAATATTAAGGAT+GGG - chr7_2:1869741-1869760 None:intergenic 20.0%
!! TTCCATTTAAATATTAAGGA+TGG - chr7_2:1869742-1869761 None:intergenic 20.0%
!!! TTCAATTTTGTACTGATTTA+AGG + chr7_2:1869805-1869824 Msa1043690:intron 20.0%
!! AATTGAAAAGGAAGAAAAAT+TGG - chr7_2:1870578-1870597 None:intergenic 20.0%
!!! TGTGAAATTATTGATTAAAC+AGG + chr7_2:1870870-1870889 Msa1043690:intron 20.0%
!!! TAAAATTAAAGTACCTAAAG+GGG - chr7_2:1871148-1871167 None:intergenic 20.0%
!!! GTAAAATTAAAGTACCTAAA+GGG - chr7_2:1871149-1871168 None:intergenic 20.0%
!!! AGTAAAATTAAAGTACCTAA+AGG - chr7_2:1871150-1871169 None:intergenic 20.0%
!!! TTATAGATTTTTCTCTCATT+TGG + chr7_2:1871199-1871218 Msa1043690:intron 20.0%
!!! TTGTTTTTAACTTTTGTCTT+TGG + chr7_2:1871546-1871565 Msa1043690:intron 20.0%
!!! TTAATGAATTTTTGTAGGAT+GGG - chr7_2:1871693-1871712 None:intergenic 20.0%
!!! TTTAATGAATTTTTGTAGGA+TGG - chr7_2:1871694-1871713 None:intergenic 20.0%
!! AACCAATAAATAAACATTCT+AGG + chr7_2:1871777-1871796 Msa1043690:intron 20.0%
!!! AACTTTTGTTTTGTTTGATT+GGG + chr7_2:1872178-1872197 Msa1043690:intron 20.0%
!!! AACAAACATTTTTAGATCTT+GGG - chr7_2:1872400-1872419 None:intergenic 20.0%
!! TGGAAATTAATAGTCAAAAA+TGG - chr7_2:1872562-1872581 None:intergenic 20.0%
!! TCAAATTAACACTATAAATC+AGG - chr7_2:1872611-1872630 None:intergenic 20.0%
!!! AATATGTTTTAGAATTGGAA+TGG + chr7_2:1874098-1874117 Msa1043690:intron 20.0%
!! TGATATTCTAATGCATATTA+AGG + chr7_2:1874131-1874150 Msa1043690:intron 20.0%
!!! TTAAAAAGGTATATGGATTA+AGG - chr7_2:1875217-1875236 None:intergenic 20.0%
!!! GTAACTTTTTAGTGTATAAT+TGG + chr7_2:1875620-1875639 Msa1043690:intron 20.0%
!! AAAAAACTATACATTGTCAT+AGG - chr7_2:1875898-1875917 None:intergenic 20.0%
!!! TAATATTTTAAAGCAAAACG+GGG - chr7_2:1877897-1877916 None:intergenic 20.0%
!!! GATCTTTAATATTTAGTTCA+TGG + chr7_2:1877945-1877964 Msa1043690:three_prime_UTR 20.0%
! AATAAGCTCAAAGAAAAGTA+TGG + chr7_2:1865916-1865935 Msa1043690:intron 25.0%
!! CTAACGGTTAATTTGAATAA+CGG - chr7_2:1866015-1866034 None:intergenic 25.0%
!!! CTTTTTCTTTGGTTATTTTG+TGG - chr7_2:1866321-1866340 None:intergenic 25.0%
!!! GCTTTTGCTTTGAATAATAA+GGG - chr7_2:1866598-1866617 None:intergenic 25.0%
!!! AGCTTTTGCTTTGAATAATA+AGG - chr7_2:1866599-1866618 None:intergenic 25.0%
!! ATCATACGCTAGTTTATAAT+TGG + chr7_2:1866994-1867013 Msa1043690:intron 25.0%
! TGAAGATGATGAAAAAAAAG+AGG - chr7_2:1867047-1867066 None:intergenic 25.0%
! AATTTCCTATAGCTAAAATG+TGG - chr7_2:1867358-1867377 None:intergenic 25.0%
! CTAAAAGAAATTCATTGCTT+TGG - chr7_2:1867414-1867433 None:intergenic 25.0%
! CCAATTGTTAATACAATACT+CGG - chr7_2:1867487-1867506 None:intergenic 25.0%
! TTCATTCAAACTCATTATTG+CGG + chr7_2:1867557-1867576 Msa1043690:intron 25.0%
! CTAATTAAACTATTACCTTC+AGG + chr7_2:1867613-1867632 Msa1043690:intron 25.0%
! ACTAAAATGAAAATTCCTGA+AGG - chr7_2:1867631-1867650 None:intergenic 25.0%
!!! CAAATTATTTCATTGGCTTT+AGG - chr7_2:1867790-1867809 None:intergenic 25.0%
!! CAATGGATTTGAATTTACAA+GGG - chr7_2:1867959-1867978 None:intergenic 25.0%
! TCTATCCAAGAATGAAATTT+AGG + chr7_2:1868057-1868076 Msa1043690:intron 25.0%
!! GTTTTCCTAAATTTCATTCT+TGG - chr7_2:1868065-1868084 None:intergenic 25.0%
! ATGGTTAATGAACTTTACTA+AGG - chr7_2:1868101-1868120 None:intergenic 25.0%
! GCCATGTAATTGAAATTAAA+TGG - chr7_2:1868120-1868139 None:intergenic 25.0%
! TTCGAACATCTAAATTGTAA+AGG + chr7_2:1868155-1868174 Msa1043690:intron 25.0%
! GAGTGTTTATTGATGTTAAA+AGG - chr7_2:1868216-1868235 None:intergenic 25.0%
! TATACTTGCATATGTTATAG+TGG - chr7_2:1868246-1868265 None:intergenic 25.0%
!!! AAATTAAACTTTGGGGTTTT+CGG - chr7_2:1868350-1868369 None:intergenic 25.0%
! GTTGAGAAAATTAAACTTTG+GGG - chr7_2:1868357-1868376 None:intergenic 25.0%
! AAATTAAAGACACTCACTTA+AGG + chr7_2:1868420-1868439 Msa1043690:intron 25.0%
! TAAAGGAAAATAAGAAGACA+AGG + chr7_2:1868454-1868473 Msa1043690:intron 25.0%
! TTATTCTTCGTCTTTACATT+AGG + chr7_2:1868539-1868558 Msa1043690:intron 25.0%
! CATCATCATCATATGTTAAA+GGG - chr7_2:1868615-1868634 None:intergenic 25.0%
! TCATCATCATCATATGTTAA+AGG - chr7_2:1868616-1868635 None:intergenic 25.0%
! TGGATAAACTAAAACTTGAT+GGG - chr7_2:1868673-1868692 None:intergenic 25.0%
! AATAAGGTGATATACACATA+GGG - chr7_2:1868735-1868754 None:intergenic 25.0%
! AAATAAGGTGATATACACAT+AGG - chr7_2:1868736-1868755 None:intergenic 25.0%
! CCTCCATATAATTATCAAAT+GGG + chr7_2:1868938-1868957 Msa1043690:intron 25.0%
!! ACTCCCATTTGATAATTATA+TGG - chr7_2:1868944-1868963 None:intergenic 25.0%
! CTAACAAAATCAACATTCAT+TGG + chr7_2:1869104-1869123 Msa1043690:intron 25.0%
!!! TTAAGTTGAACAACAACAAA+AGG + chr7_2:1869211-1869230 Msa1043690:intron 25.0%
! TCTCAAAATAGAGTTAGTAT+AGG - chr7_2:1869383-1869402 None:intergenic 25.0%
! AAATCAGTACAAAATTGAAG+AGG - chr7_2:1869804-1869823 None:intergenic 25.0%
! AATTTCAGTAAATAAACCCA+AGG - chr7_2:1869906-1869925 None:intergenic 25.0%
! AAACAGCAAATGAATTGAAA+AGG - chr7_2:1870590-1870609 None:intergenic 25.0%
! CAGTTTATGAATTTCCAAAT+TGG + chr7_2:1870695-1870714 Msa1043690:intron 25.0%
! TTTATGAATTTCCAAATTGG+AGG + chr7_2:1870698-1870717 Msa1043690:intron 25.0%
!!! AATTCTTATTTTATGGATGG+TGG + chr7_2:1871040-1871059 Msa1043690:intron 25.0%
!! ATTTTTATTGAAGTTGGGAA+TGG + chr7_2:1871326-1871345 Msa1043690:intron 25.0%
!!! ATTATTGACTTACAGATCTT+TGG + chr7_2:1871488-1871507 Msa1043690:intron 25.0%
!!! TTATTGACTTACAGATCTTT+GGG + chr7_2:1871489-1871508 Msa1043690:intron 25.0%
!! ATTGTATCTTTTCCAAACAA+AGG + chr7_2:1871713-1871732 Msa1043690:intron 25.0%
! TGCCTAGAATGTTTATTTAT+TGG - chr7_2:1871782-1871801 None:intergenic 25.0%
!!! AAGTTTTGTACTATTGCTAT+TGG + chr7_2:1871848-1871867 Msa1043690:intron 25.0%
!!! CAACTTTTGTTTTGTTTGAT+TGG + chr7_2:1872177-1872196 Msa1043690:intron 25.0%
! TAAAGTAACTAAAACTGTAG+AGG - chr7_2:1872273-1872292 None:intergenic 25.0%
!!! ACAAACATTTTTAGATCTTG+GGG - chr7_2:1872399-1872418 None:intergenic 25.0%
!!! CAACAAACATTTTTAGATCT+TGG - chr7_2:1872401-1872420 None:intergenic 25.0%
! GACTATTAATTTCCATCATT+CGG + chr7_2:1872567-1872586 Msa1043690:intron 25.0%
! TATATATGGTGCAAATATAG+AGG + chr7_2:1872822-1872841 Msa1043690:intron 25.0%
! GTTTCCTACATAAAACAAAA+CGG - chr7_2:1872864-1872883 None:intergenic 25.0%
! AACAAAATAGCATAAAGGAA+AGG - chr7_2:1873364-1873383 None:intergenic 25.0%
! ATATCACTTATACTTGGATA+GGG - chr7_2:1873919-1873938 None:intergenic 25.0%
! TATATCACTTATACTTGGAT+AGG - chr7_2:1873920-1873939 None:intergenic 25.0%
! ATCCAAGTATAAGTGATATA+AGG + chr7_2:1873920-1873939 Msa1043690:intron 25.0%
! AACCTTATATCACTTATACT+TGG - chr7_2:1873925-1873944 None:intergenic 25.0%
!!! GTGATATAAGGTTTTAGAAT+TGG + chr7_2:1873932-1873951 Msa1043690:intron 25.0%
!!! ATAAGGTTTTAGAATTGGAA+TGG + chr7_2:1873937-1873956 Msa1043690:intron 25.0%
! TATTTATATCTTATGGCAGA+TGG - chr7_2:1874000-1874019 None:intergenic 25.0%
! AAAAGTAACAGATGTATGAA+TGG - chr7_2:1874356-1874375 None:intergenic 25.0%
! ATATTGGAGAACTTTGTAAA+TGG + chr7_2:1874797-1874816 Msa1043690:intron 25.0%
!!! TAAGTTTTGTGATGCTATTT+GGG - chr7_2:1875039-1875058 None:intergenic 25.0%
!!! ATAAGTTTTGTGATGCTATT+TGG - chr7_2:1875040-1875059 None:intergenic 25.0%
! TGAAAACAACTTATGAACAA+TGG + chr7_2:1875109-1875128 Msa1043690:intron 25.0%
!! ATATGGATTAAGGAATTGTT+TGG - chr7_2:1875207-1875226 None:intergenic 25.0%
!! ATAGTATACTAGTTATTTCC+AGG + chr7_2:1875404-1875423 Msa1043690:intron 25.0%
!!! TAATTTTAGTATCAACGCTA+TGG + chr7_2:1875471-1875490 Msa1043690:intron 25.0%
!!! CATTCAGATTGTTTTTTGTT+TGG + chr7_2:1875542-1875561 Msa1043690:intron 25.0%
! AGTCTTTCTATGTTTAATAC+AGG + chr7_2:1875969-1875988 Msa1043690:intron 25.0%
! GTCTTTCTATGTTTAATACA+GGG + chr7_2:1875970-1875989 Msa1043690:intron 25.0%
! TCTTTCTATGTTTAATACAG+GGG + chr7_2:1875971-1875990 Msa1043690:intron 25.0%
! TCTTTCTATGCTTAATACAA+GGG - chr7_2:1876036-1876055 None:intergenic 25.0%
! AACTTACAACTAAAACTCTT+AGG + chr7_2:1876265-1876284 Msa1043690:intron 25.0%
! ACTTACAACTAAAACTCTTA+GGG + chr7_2:1876266-1876285 Msa1043690:intron 25.0%
!!! ATTGGTTGTTTTTCAATTGA+AGG - chr7_2:1876464-1876483 None:intergenic 25.0%
! AAACTAAACAAGTATGAAAG+AGG + chr7_2:1876860-1876879 Msa1043690:intron 25.0%
! TATGAAAGAGGAAAAAGAAA+AGG + chr7_2:1876872-1876891 Msa1043690:intron 25.0%
! ATGAAAGAGGAAAAAGAAAA+GGG + chr7_2:1876873-1876892 Msa1043690:intron 25.0%
! AATGTAACATTTCTTCAGTT+TGG - chr7_2:1877021-1877040 None:intergenic 25.0%
! TCAAAAGAAATGGAAGAATA+AGG - chr7_2:1877196-1877215 None:intergenic 25.0%
! GAAGAAAAGAAATCATTATG+TGG + chr7_2:1877748-1877767 Msa1043690:CDS 25.0%
! AAAAGAAATCATTATGTGGA+AGG + chr7_2:1877752-1877771 Msa1043690:CDS 25.0%
! TTGTGTGAGATTAATTATCA+AGG + chr7_2:1877849-1877868 Msa1043690:three_prime_UTR 25.0%
!!! CTTATTTTAACATATGCGAA+CGG + chr7_2:1877923-1877942 Msa1043690:three_prime_UTR 25.0%
AAATAGTGTGATGCTACTAA+CGG - chr7_2:1866031-1866050 None:intergenic 30.0%
TTGACAAAAAAAGCTCTGTT+TGG + chr7_2:1866440-1866459 Msa1043690:intron 30.0%
! TTTTTCTAGACAAAACCTAC+AGG + chr7_2:1866847-1866866 Msa1043690:intron 30.0%
GATGATGAAAAAAAAGAGGA+GGG - chr7_2:1867043-1867062 None:intergenic 30.0%
AGATGATGAAAAAAAAGAGG+AGG - chr7_2:1867044-1867063 None:intergenic 30.0%
! TGAGATTATGTGTTGTTGTT+GGG - chr7_2:1867174-1867193 None:intergenic 30.0%
! ATGAGATTATGTGTTGTTGT+TGG - chr7_2:1867175-1867194 None:intergenic 30.0%
TAACGAAAGAGGTAACATTA+GGG - chr7_2:1867229-1867248 None:intergenic 30.0%
TTAACGAAAGAGGTAACATT+AGG - chr7_2:1867230-1867249 None:intergenic 30.0%
! CCGAGTATTGTATTAACAAT+TGG + chr7_2:1867484-1867503 Msa1043690:intron 30.0%
! AGTTTGAATGAAAAGCATAG+TGG - chr7_2:1867549-1867568 None:intergenic 30.0%
!! ATCTACATTTTGACATGTTG+TGG + chr7_2:1867919-1867938 Msa1043690:intron 30.0%
!! TCTACATTTTGACATGTTGT+GGG + chr7_2:1867920-1867939 Msa1043690:intron 30.0%
! GCAATGGATTTGAATTTACA+AGG - chr7_2:1867960-1867979 None:intergenic 30.0%
TCATGAATAGAACTTAGCAA+TGG - chr7_2:1867976-1867995 None:intergenic 30.0%
TCATTCTTGGATAGAACAAT+TGG - chr7_2:1868052-1868071 None:intergenic 30.0%
AAAGACGAAGAATAAGAGTT+AGG - chr7_2:1868534-1868553 None:intergenic 30.0%
ATCATCATATGTTAAAGGGA+GGG - chr7_2:1868611-1868630 None:intergenic 30.0%
GATAAACTAAAACTTGATGG+GGG - chr7_2:1868671-1868690 None:intergenic 30.0%
GGATAAACTAAAACTTGATG+GGG - chr7_2:1868672-1868691 None:intergenic 30.0%
GTGGATAAACTAAAACTTGA+TGG - chr7_2:1868674-1868693 None:intergenic 30.0%
! ATAAACTTTAGAGACGATGA+GGG - chr7_2:1868841-1868860 None:intergenic 30.0%
GCCTCCATATAATTATCAAA+TGG + chr7_2:1868937-1868956 Msa1043690:intron 30.0%
! CCCATTTGATAATTATATGG+AGG - chr7_2:1868941-1868960 None:intergenic 30.0%
TTGGATAAGTACGAATTAGA+TGG + chr7_2:1869123-1869142 Msa1043690:intron 30.0%
TGGACAAAACATGTATGTTA+GGG - chr7_2:1869298-1869317 None:intergenic 30.0%
ATGGACAAAACATGTATGTT+AGG - chr7_2:1869299-1869318 None:intergenic 30.0%
TTTGTCCATGAACATTATGT+TGG + chr7_2:1869310-1869329 Msa1043690:intron 30.0%
TTGTCCATGAACATTATGTT+GGG + chr7_2:1869311-1869330 Msa1043690:intron 30.0%
AAAACCCAACATAATGTTCA+TGG - chr7_2:1869318-1869337 None:intergenic 30.0%
! TGAACATTATGTTGGGTTTT+AGG + chr7_2:1869318-1869337 Msa1043690:intron 30.0%
AACTCATGAAATCCAAGAAA+CGG + chr7_2:1869557-1869576 Msa1043690:intron 30.0%
! TTTATGGACTGACATGTTAT+GGG - chr7_2:1869717-1869736 None:intergenic 30.0%
! AATATTAAGGATGGGCTTTA+TGG - chr7_2:1869733-1869752 None:intergenic 30.0%
GCCCATCCTTAATATTTAAA+TGG + chr7_2:1869737-1869756 Msa1043690:intron 30.0%
!!! TTTTGTACTGATTTAAGGCA+TGG + chr7_2:1869810-1869829 Msa1043690:intron 30.0%
AATAAACCCAAGGTAATCTA+GGG - chr7_2:1869896-1869915 None:intergenic 30.0%
AAATAAACCCAAGGTAATCT+AGG - chr7_2:1869897-1869916 None:intergenic 30.0%
GCAAAATACAATTAGCCAAT+AGG + chr7_2:1870058-1870077 Msa1043690:intron 30.0%
AATTAGCCAATAGGAGTAAA+GGG + chr7_2:1870067-1870086 Msa1043690:intron 30.0%
ATAACAGAAAATTGAGCAGT+TGG + chr7_2:1870098-1870117 Msa1043690:intron 30.0%
TGAAAATGAATTGAGAGAAG+AGG - chr7_2:1870175-1870194 None:intergenic 30.0%
! GAGAAATTTGAAGATGGATT+GGG - chr7_2:1870271-1870290 None:intergenic 30.0%
TGATTGAGAAGAGAAATTAG+TGG + chr7_2:1870506-1870525 Msa1043690:intron 30.0%
CAGTGATTGTTCAATTCATA+AGG + chr7_2:1870548-1870567 Msa1043690:intron 30.0%
! TTTGATTTCAACCTCCAATT+TGG - chr7_2:1870712-1870731 None:intergenic 30.0%
! AAACAGGATATTGCATCTTT+TGG + chr7_2:1870886-1870905 Msa1043690:intron 30.0%
ACTGAAAATGATGAAAGAGA+TGG - chr7_2:1870989-1871008 None:intergenic 30.0%
!! TTATTTTATGGATGGTGGTT+TGG + chr7_2:1871045-1871064 Msa1043690:intron 30.0%
AAAGTGATACTTTGATGAGA+AGG + chr7_2:1871100-1871119 Msa1043690:intron 30.0%
!! TGAACCATGTTTTGAGTATA+AGG + chr7_2:1871394-1871413 Msa1043690:intron 30.0%
! TATAAGGTGCCAAAATGATA+TGG + chr7_2:1871410-1871429 Msa1043690:intron 30.0%
! AAAACTGGACCATATCATTT+TGG - chr7_2:1871422-1871441 None:intergenic 30.0%
GCAAGAAAAAGAGAATTAGA+AGG + chr7_2:1871799-1871818 Msa1043690:intron 30.0%
ATAAACATCACATCTTTGAG+AGG - chr7_2:1872328-1872347 None:intergenic 30.0%
AAAAAACCTTTCCATTTCGT+AGG + chr7_2:1872353-1872372 Msa1043690:intron 30.0%
!! CAAACATTTTTAGATCTTGG+GGG - chr7_2:1872398-1872417 None:intergenic 30.0%
TATTCTACTTAACCGAATGA+TGG - chr7_2:1872582-1872601 None:intergenic 30.0%
TGTGTATAAGTATATACCAG+TGG - chr7_2:1872709-1872728 None:intergenic 30.0%
TTTATGTAGGAAACTGTTGA+AGG + chr7_2:1872870-1872889 Msa1043690:intron 30.0%
GATTCAAATGTTATGGATGA+AGG + chr7_2:1873122-1873141 Msa1043690:intron 30.0%
ACTCAGACTAAAAATCCATT+GGG + chr7_2:1873167-1873186 Msa1043690:CDS 30.0%
TGACGAACAAAATAGCATAA+AGG - chr7_2:1873369-1873388 None:intergenic 30.0%
TTTATTCGATTTCCTGACAT+AGG + chr7_2:1873574-1873593 Msa1043690:intron 30.0%
TTATTCGATTTCCTGACATA+GGG + chr7_2:1873575-1873594 Msa1043690:intron 30.0%
AGTAGTTACAACTCATAAAC+AGG + chr7_2:1873722-1873741 Msa1043690:intron 30.0%
GATGGGATCAAATTATTAGA+TGG + chr7_2:1873759-1873778 Msa1043690:intron 30.0%
! AAGGTCTAGTTGATATTTCA+AGG + chr7_2:1874214-1874233 Msa1043690:intron 30.0%
! AGGTCTAGTTGATATTTCAA+GGG + chr7_2:1874215-1874234 Msa1043690:intron 30.0%
AGAAAATGAAACTAGGGTTT+GGG - chr7_2:1874280-1874299 None:intergenic 30.0%
ATGGAGAGAAAATGAAACTA+GGG - chr7_2:1874286-1874305 None:intergenic 30.0%
ACAAAACCCTAAATCACATT+GGG - chr7_2:1874421-1874440 None:intergenic 30.0%
!!! ATGTAATTTTAGGCCTTGTT+TGG + chr7_2:1874672-1874691 Msa1043690:intron 30.0%
ATAAGCTGTTAATCCAAACA+AGG - chr7_2:1874688-1874707 None:intergenic 30.0%
TTAGTACAAGCTAGCTATAT+TGG + chr7_2:1874781-1874800 Msa1043690:intron 30.0%
!! AGTTGTTTTCAGCTTAAGTA+GGG - chr7_2:1875100-1875119 None:intergenic 30.0%
!! AAGTTGTTTTCAGCTTAAGT+AGG - chr7_2:1875101-1875120 None:intergenic 30.0%
GATTAAGGAATTGTTTGGAT+TGG - chr7_2:1875202-1875221 None:intergenic 30.0%
!! TTTAATTTGTGTGCAGCAAA+AGG + chr7_2:1875257-1875276 Msa1043690:intron 30.0%
CTAAGCTCTTGTTCATTATT+AGG + chr7_2:1875340-1875359 Msa1043690:CDS 30.0%
TTGTTCATTATTAGGATCAG+AGG + chr7_2:1875348-1875367 Msa1043690:CDS 30.0%
TGTTCATTATTAGGATCAGA+GGG + chr7_2:1875349-1875368 Msa1043690:CDS 30.0%
! GCAAAATCTTCCTTGATTTT+GGG - chr7_2:1875498-1875517 None:intergenic 30.0%
! TGCAAAATCTTCCTTGATTT+TGG - chr7_2:1875499-1875518 None:intergenic 30.0%
!!! TGTGATACACTTGTGTTTTT+TGG + chr7_2:1875718-1875737 Msa1043690:intron 30.0%
TTTGTTCAGTGAGTTATTCT+AGG + chr7_2:1875784-1875803 Msa1043690:intron 30.0%
GTCTTTCTATGCTTAATACA+AGG - chr7_2:1876037-1876056 None:intergenic 30.0%
AGTTGTGATGTTATCAAACA+TGG - chr7_2:1876249-1876268 None:intergenic 30.0%
GAAAATGAGAAGAGAGAAAT+AGG + chr7_2:1876307-1876326 Msa1043690:intron 30.0%
TGAGAAATAGAGTAGATTTG+AGG + chr7_2:1876360-1876379 Msa1043690:intron 30.0%
!! AGTAGATTTGAGGTATTGTT+TGG + chr7_2:1876370-1876389 Msa1043690:intron 30.0%
GAAAAAGAAAAGGGTAATTG+TGG + chr7_2:1876882-1876901 Msa1043690:intron 30.0%
ATCAAAACCTCTGCTATAAT+GGG - chr7_2:1877127-1877146 None:intergenic 30.0%
ATTCTTCAACACAGTATTAG+AGG - chr7_2:1877152-1877171 None:intergenic 30.0%
!! TTTTGACTGCAGATCTTTAA+TGG + chr7_2:1877210-1877229 Msa1043690:intron 30.0%
TACAACATTTAGTGATTGCA+GGG - chr7_2:1877426-1877445 None:intergenic 30.0%
CAATCACTAAATGTTGTAGT+CGG + chr7_2:1877428-1877447 Msa1043690:intron 30.0%
TTTGACTGACATTATCCAAT+GGG + chr7_2:1877591-1877610 Msa1043690:intron 30.0%
!!! CAGAAGGATGAATTAGTTTT+TGG + chr7_2:1877817-1877836 Msa1043690:exon 30.0%
GTCAAGGATGAATAAGTAAA+AGG - chr7_2:1878000-1878019 None:intergenic 30.0%
!! ACATTGACTCTCATTCATTG+AGG - chr7_2:1865875-1865894 None:intergenic 35.0%
TAACGTGTAAGGTAAAGTTG+TGG + chr7_2:1866214-1866233 Msa1043690:intron 35.0%
AACGTGTAAGGTAAAGTTGT+GGG + chr7_2:1866215-1866234 Msa1043690:intron 35.0%
!!! GCTCTTGTGTCATCATTTTT+TGG + chr7_2:1866356-1866375 Msa1043690:intron 35.0%
!!! CATCATTTTTTGGCTCTGTT+TGG + chr7_2:1866366-1866385 Msa1043690:intron 35.0%
!!! GAGCTAAACGCTCTTTTTTT+GGG - chr7_2:1866396-1866415 None:intergenic 35.0%
!!! AGAGCTAAACGCTCTTTTTT+TGG - chr7_2:1866397-1866416 None:intergenic 35.0%
ACGAGCTTATAGCTTATTTC+AGG + chr7_2:1866488-1866507 Msa1043690:intron 35.0%
! GATAAGCTAGTTGAAGTGTT+TGG - chr7_2:1866636-1866655 None:intergenic 35.0%
AGACAAAACCTACAGGATTT+AGG + chr7_2:1866854-1866873 Msa1043690:intron 35.0%
ATTGTATGCCTAAATCCTGT+AGG - chr7_2:1866865-1866884 None:intergenic 35.0%
AGGATTTAGGCATACAATGA+TGG + chr7_2:1866867-1866886 Msa1043690:intron 35.0%
!! TGGAATCAATTGTTGATGAC+TGG + chr7_2:1866887-1866906 Msa1043690:intron 35.0%
ATGAAAAAAAAGAGGAGGGA+AGG - chr7_2:1867039-1867058 None:intergenic 35.0%
! GGAATTAGAATTGTTGGTGA+TGG - chr7_2:1867205-1867224 None:intergenic 35.0%
TAGGGAGGAATTAGAATTGT+TGG - chr7_2:1867211-1867230 None:intergenic 35.0%
TTGGATGAAGTTAACGAAAG+AGG - chr7_2:1867240-1867259 None:intergenic 35.0%
ATTCAAACTCATTATTGCGG+TGG + chr7_2:1867560-1867579 Msa1043690:intron 35.0%
! TTTGACATGTTGTGGGATTT+TGG + chr7_2:1867927-1867946 Msa1043690:intron 35.0%
! TTGACATGTTGTGGGATTTT+GGG + chr7_2:1867928-1867947 Msa1043690:intron 35.0%
AATCGAACTCTGGATTACTA+TGG - chr7_2:1868006-1868025 None:intergenic 35.0%
!! AGGATTTTGATGAAATGACG+TGG - chr7_2:1868299-1868318 None:intergenic 35.0%
TTAAAGACACTCACTTAAGG+TGG + chr7_2:1868423-1868442 Msa1043690:intron 35.0%
CATCATCATATGTTAAAGGG+AGG - chr7_2:1868612-1868631 None:intergenic 35.0%
! CATAAACTTTAGAGACGATG+AGG - chr7_2:1868842-1868861 None:intergenic 35.0%
TTCATCTTGCAAATGTCTAG+TGG - chr7_2:1868900-1868919 None:intergenic 35.0%
GGACAAAACATGTATGTTAG+GGG - chr7_2:1869297-1869316 None:intergenic 35.0%
! AAATTGACAACACAAGTTGG+AGG - chr7_2:1869460-1869479 None:intergenic 35.0%
AGCAAATTGACAACACAAGT+TGG - chr7_2:1869463-1869482 None:intergenic 35.0%
ACTCATGAAATCCAAGAAAC+GGG + chr7_2:1869558-1869577 Msa1043690:intron 35.0%
ATCTCCCAAACGTTATGTTT+AGG + chr7_2:1869608-1869627 Msa1043690:intron 35.0%
TCTCCCAAACGTTATGTTTA+GGG + chr7_2:1869609-1869628 Msa1043690:intron 35.0%
GTTATGTTTAGGGGCAAAAA+CGG + chr7_2:1869619-1869638 Msa1043690:intron 35.0%
! CTTTATGGACTGACATGTTA+TGG - chr7_2:1869718-1869737 None:intergenic 35.0%
AAAATTGAAGAGGATGCCTA+GGG - chr7_2:1869794-1869813 None:intergenic 35.0%
! TACTGAAATTGCCCTTCTTT+TGG + chr7_2:1869916-1869935 Msa1043690:intron 35.0%
TTGAACAGTCAACACATAAC+TGG - chr7_2:1869989-1870008 None:intergenic 35.0%
ATCCTTGATGTGTGTTTGTT+TGG + chr7_2:1870008-1870027 Msa1043690:intron 35.0%
TTGATGTGTGTTTGTTTGGT+CGG + chr7_2:1870012-1870031 Msa1043690:intron 35.0%
CAATTAGCCAATAGGAGTAA+AGG + chr7_2:1870066-1870085 Msa1043690:intron 35.0%
AAATTGAGCAGTTGGAGTAA+AGG + chr7_2:1870106-1870125 Msa1043690:intron 35.0%
AATTGAGCAGTTGGAGTAAA+GGG + chr7_2:1870107-1870126 Msa1043690:intron 35.0%
!! AAATTTGAAGATGGATTGGG+AGG - chr7_2:1870268-1870287 None:intergenic 35.0%
GGAGAAATTTGAAGATGGAT+TGG - chr7_2:1870272-1870291 None:intergenic 35.0%
! TTTTGTAGAGAGATCAAGGA+AGG - chr7_2:1870371-1870390 None:intergenic 35.0%
! AGGATTTTGTAGAGAGATCA+AGG - chr7_2:1870375-1870394 None:intergenic 35.0%
GAGAAATTAGTGGTTCGATT+AGG + chr7_2:1870516-1870535 Msa1043690:intron 35.0%
CTACCTTTCATAATCAATGC+CGG - chr7_2:1870955-1870974 None:intergenic 35.0%
!! TTTTGTTTCAATCTCTGCAG+GGG - chr7_2:1871263-1871282 None:intergenic 35.0%
!!! GTTTTGTTTCAATCTCTGCA+GGG - chr7_2:1871264-1871283 None:intergenic 35.0%
CTGCAGAGATTGAAACAAAA+CGG + chr7_2:1871263-1871282 Msa1043690:intron 35.0%
TATTGAAGTTGGGAATGGAA+TGG + chr7_2:1871331-1871350 Msa1043690:intron 35.0%
CACATGATTAGCATCAAAAC+TGG - chr7_2:1871437-1871456 None:intergenic 35.0%
!! CAGTTTTGATGCTAATCATG+TGG + chr7_2:1871435-1871454 Msa1043690:intron 35.0%
TAATCATGTGGTATGAAGCT+TGG + chr7_2:1871447-1871466 Msa1043690:intron 35.0%
!!! AGATCTTTGGGACTTTTCAA+AGG + chr7_2:1871501-1871520 Msa1043690:intron 35.0%
! ACTTTTGTCTTTGGTCTCTT+AGG + chr7_2:1871555-1871574 Msa1043690:intron 35.0%
TCCAAACAAAGGTAACATCT+TGG + chr7_2:1871724-1871743 Msa1043690:intron 35.0%
ACCAAGATGTTACCTTTGTT+TGG - chr7_2:1871728-1871747 None:intergenic 35.0%
!! ATCTTGGTCTTGGAATGAAT+AGG + chr7_2:1871740-1871759 Msa1043690:intron 35.0%
!! TCTTGGTCTTGGAATGAATA+GGG + chr7_2:1871741-1871760 Msa1043690:intron 35.0%
TTGGAATGAATAGGGATGTA+GGG + chr7_2:1871749-1871768 Msa1043690:intron 35.0%
! TAGCCTTAAAATGTGATCCA+GGG - chr7_2:1871825-1871844 None:intergenic 35.0%
! ATAGCCTTAAAATGTGATCC+AGG - chr7_2:1871826-1871845 None:intergenic 35.0%
GCAAGTAACATTGCAAACAT+TGG + chr7_2:1872044-1872063 Msa1043690:intron 35.0%
TGTTGTCTATCACTTCAACA+TGG - chr7_2:1872148-1872167 None:intergenic 35.0%
CAAAACAAAAGTTGTTGAGC+CGG - chr7_2:1872171-1872190 None:intergenic 35.0%
TAGTTTCCTACGAAATGGAA+AGG - chr7_2:1872362-1872381 None:intergenic 35.0%
AAGCAGATTATAGATCTCCA+TGG + chr7_2:1872522-1872541 Msa1043690:CDS 35.0%
CGATGTAGTAATAAAGTCAC+TGG + chr7_2:1872758-1872777 Msa1043690:intron 35.0%
AAACAAAACGGCGTATTACT+TGG - chr7_2:1872852-1872871 None:intergenic 35.0%
!!! TACGCCGTTTTGTTTTATGT+AGG + chr7_2:1872857-1872876 Msa1043690:intron 35.0%
! AGGAGTTGATTCAAGCAATA+AGG + chr7_2:1872890-1872909 Msa1043690:CDS 35.0%
AGCAATAAGGATGATGTTGA+TGG + chr7_2:1872903-1872922 Msa1043690:CDS 35.0%
TGATGTTAGTGTTCAGTCAT+TGG + chr7_2:1872974-1872993 Msa1043690:CDS 35.0%
GGTGTCTGATTCAAATGTTA+TGG + chr7_2:1873115-1873134 Msa1043690:intron 35.0%
GACTCAGACTAAAAATCCAT+TGG + chr7_2:1873166-1873185 Msa1043690:CDS 35.0%
ATTTGATCCCATCATCAAAG+TGG - chr7_2:1873752-1873771 None:intergenic 35.0%
GAGAAAATGAAACTAGGGTT+TGG - chr7_2:1874281-1874300 None:intergenic 35.0%
GATGGAGAGAAAATGAAACT+AGG - chr7_2:1874287-1874306 None:intergenic 35.0%
AGTAACAGATGTATGAATGG+AGG - chr7_2:1874353-1874372 None:intergenic 35.0%
TTCATCCCCAATGTGATTTA+GGG + chr7_2:1874412-1874431 Msa1043690:intron 35.0%
CAAAACCCTAAATCACATTG+GGG - chr7_2:1874420-1874439 None:intergenic 35.0%
CACAAAACCCTAAATCACAT+TGG - chr7_2:1874422-1874441 None:intergenic 35.0%
!! TGTGCTCTGATTTGATTTGA+AGG + chr7_2:1874445-1874464 Msa1043690:intron 35.0%
! CCTTTTCTGCTTCTTCAAAA+CGG - chr7_2:1874508-1874527 None:intergenic 35.0%
CTGAAACAAGGAAACTCATT+TGG + chr7_2:1874586-1874605 Msa1043690:CDS 35.0%
ATATTCCTTGGCGTATTGTT+TGG - chr7_2:1874619-1874638 None:intergenic 35.0%
TACCTGATCATCATATTCCT+TGG - chr7_2:1874631-1874650 None:intergenic 35.0%
! ACTTTGTAAATGGCGTTTTG+TGG + chr7_2:1874807-1874826 Msa1043690:intron 35.0%
GTCAGTAGATAAGCTCAATT+AGG + chr7_2:1875060-1875079 Msa1043690:intron 35.0%
TCAATTAGGCCAATCAAATC+AGG + chr7_2:1875074-1875093 Msa1043690:intron 35.0%
GCTTATTTGAGCTTATCTAC+AGG - chr7_2:1875180-1875199 None:intergenic 35.0%
! GTATACTAGTTATTTCCAGG+TGG + chr7_2:1875407-1875426 Msa1043690:intron 35.0%
ACAATAACAAGAAAACCACC+TGG - chr7_2:1875425-1875444 None:intergenic 35.0%
AACACAAGTGTATCACAATG+AGG - chr7_2:1875715-1875734 None:intergenic 35.0%
CTGAACAAACCTTTAATCAG+AGG - chr7_2:1875773-1875792 None:intergenic 35.0%
TCATAGGTACACTTAACAGT+GGG - chr7_2:1875882-1875901 None:intergenic 35.0%
TCAGGTGTAACTATATCTCA+AGG - chr7_2:1875921-1875940 None:intergenic 35.0%
! AAATCACATCAAAGTGCTTC+AGG - chr7_2:1875939-1875958 None:intergenic 35.0%
AGCATAGAAAGACTATTCCA+AGG + chr7_2:1876044-1876063 Msa1043690:intron 35.0%
GCATAGAAAGACTATTCCAA+GGG + chr7_2:1876045-1876064 Msa1043690:intron 35.0%
CTATGCTTAATACAATCCCT+TGG - chr7_2:1876064-1876083 None:intergenic 35.0%
! CTCTCTACTTGTTACTAGTT+AGG + chr7_2:1876219-1876238 Msa1043690:intron 35.0%
TAAAACTCTTAGGGTGTGTT+TGG + chr7_2:1876275-1876294 Msa1043690:intron 35.0%
!!! TTTTTGAGTCTTCGCAAATC+TGG - chr7_2:1876948-1876967 None:intergenic 35.0%
! TTTGGTTCAGCAGAGAATTA+GGG - chr7_2:1877003-1877022 None:intergenic 35.0%
!! TATAATGGGTCTATCAAGGA+TGG - chr7_2:1877113-1877132 None:intergenic 35.0%
GATCAAAACCTCTGCTATAA+TGG - chr7_2:1877128-1877147 None:intergenic 35.0%
GGCTACATTGTAATATTGCA+TGG - chr7_2:1877175-1877194 None:intergenic 35.0%
AGATCTGCAGTCAAAAGAAA+TGG - chr7_2:1877206-1877225 None:intergenic 35.0%
! GTTGAGCCTTATGTTACATA+CGG + chr7_2:1877279-1877298 Msa1043690:CDS 35.0%
! TTGAGCCTTATGTTACATAC+GGG + chr7_2:1877280-1877299 Msa1043690:CDS 35.0%
AGACAACTCAATCATTGAAC+AGG + chr7_2:1877383-1877402 Msa1043690:CDS 35.0%
TTGAACAGGTTTGTCTGATT+TGG + chr7_2:1877397-1877416 Msa1043690:intron 35.0%
CTACAACATTTAGTGATTGC+AGG - chr7_2:1877427-1877446 None:intergenic 35.0%
AATGATGATCCATTCCATCT+AGG - chr7_2:1877471-1877490 None:intergenic 35.0%
!! ATCATTCCGACTTTGTTGTT+TGG + chr7_2:1877485-1877504 Msa1043690:intron 35.0%
TAGGAACCAAACAACAAAGT+CGG - chr7_2:1877494-1877513 None:intergenic 35.0%
CTTTGACTGACATTATCCAA+TGG + chr7_2:1877590-1877609 Msa1043690:intron 35.0%
ATTCACGAGATACTAACAGT+TGG + chr7_2:1877656-1877675 Msa1043690:CDS 35.0%
TTTCTTCTTCATACCACCTA+GGG - chr7_2:1877735-1877754 None:intergenic 35.0%
! TTTTCTTCTTCATACCACCT+AGG - chr7_2:1877736-1877755 None:intergenic 35.0%
AGAAATCATTATGTGGAAGG+TGG + chr7_2:1877755-1877774 Msa1043690:CDS 35.0%
TTAAAGCAAAACGGGGATTA+AGG - chr7_2:1877890-1877909 None:intergenic 35.0%
! AGAATTTTTCACTGCATTCC+AGG - chr7_2:1877976-1877995 None:intergenic 35.0%
AAACTGAATTGGCAAAGTCA+AGG - chr7_2:1878016-1878035 None:intergenic 35.0%
ACGTGTAAGGTAAAGTTGTG+GGG + chr7_2:1866216-1866235 Msa1043690:intron 40.0%
ATTGTGACACGACATCTTGA+AGG - chr7_2:1866293-1866312 None:intergenic 40.0%
TTCAAGATGTCGTGTCACAA+TGG + chr7_2:1866292-1866311 Msa1043690:intron 40.0%
! CCAATGGCGATCTTTTTCTT+TGG - chr7_2:1866332-1866351 None:intergenic 40.0%
CCAAAGAAAAAGATCGCCAT+TGG + chr7_2:1866329-1866348 Msa1043690:intron 40.0%
!! GGTAACACTTTAGCTCTGTT+TGG + chr7_2:1866461-1866480 Msa1043690:intron 40.0%
TTACCAAACAGAGCCTTTGT+AGG + chr7_2:1866685-1866704 Msa1043690:intron 40.0%
AGCCTTTGTAGGTCTAGATA+AGG + chr7_2:1866696-1866715 Msa1043690:intron 40.0%
GCCTTTGTAGGTCTAGATAA+GGG + chr7_2:1866697-1866716 Msa1043690:intron 40.0%
TCCCTTATCTAGACCTACAA+AGG - chr7_2:1866701-1866720 None:intergenic 40.0%
TTGTTGGGTCGATGAATTTC+TGG - chr7_2:1867159-1867178 None:intergenic 40.0%
AGCTAAAATGTGGCAGTGTT+GGG - chr7_2:1867348-1867367 None:intergenic 40.0%
TAGCTAAAATGTGGCAGTGT+TGG - chr7_2:1867349-1867368 None:intergenic 40.0%
!!! CACTGCCACATTTTAGCTAT+AGG + chr7_2:1867350-1867369 Msa1043690:intron 40.0%
ACAATACTCGGATGTCTTAG+TGG - chr7_2:1867475-1867494 None:intergenic 40.0%
! AGAGAACTGTGTTGTTGTGT+CGG - chr7_2:1867713-1867732 None:intergenic 40.0%
CTTACGTCATAATCGAACTC+TGG - chr7_2:1868016-1868035 None:intergenic 40.0%
CAGAGTTCGATTATGACGTA+AGG + chr7_2:1868014-1868033 Msa1043690:intron 40.0%
!!! AAACTTTGGGGTTTTCGGAA+AGG - chr7_2:1868345-1868364 None:intergenic 40.0%
! TCAACATCAAAGGAAGTACG+CGG + chr7_2:1868372-1868391 Msa1043690:intron 40.0%
TTAAGGTGGTGAAACGCTAA+AGG + chr7_2:1868437-1868456 Msa1043690:intron 40.0%
TCATATGTTAAAGGGAGGGA+GGG - chr7_2:1868607-1868626 None:intergenic 40.0%
ATCATATGTTAAAGGGAGGG+AGG - chr7_2:1868608-1868627 None:intergenic 40.0%
ATGGAGGCTTAGAATGTGTT+CGG - chr7_2:1868925-1868944 None:intergenic 40.0%
CTCGATCATAAGCGAAATTG+AGG + chr7_2:1869014-1869033 Msa1043690:intron 40.0%
! TAATCTCATTGGTGGACCTT+TGG - chr7_2:1869058-1869077 None:intergenic 40.0%
AAAGGTCCACCAATGAGATT+AGG + chr7_2:1869057-1869076 Msa1043690:intron 40.0%
TTAGGGGCTAGAGAACAATT+GGG - chr7_2:1869281-1869300 None:intergenic 40.0%
GGCATATCGTATATGCATCA+GGG - chr7_2:1869362-1869381 None:intergenic 40.0%
AGGCATATCGTATATGCATC+AGG - chr7_2:1869363-1869382 None:intergenic 40.0%
!! TTGTGTTGTCAATTTGCTGC+TGG + chr7_2:1869465-1869484 Msa1043690:intron 40.0%
! CATTTTGCCAACTCGATAGA+AGG + chr7_2:1869519-1869538 Msa1043690:intron 40.0%
AATGGTTCCTTCTATCGAGT+TGG - chr7_2:1869529-1869548 None:intergenic 40.0%
ACTCGATAGAAGGAACCATT+CGG + chr7_2:1869529-1869548 Msa1043690:intron 40.0%
TTCATGAGTTATCTCCCGAA+TGG - chr7_2:1869547-1869566 None:intergenic 40.0%
AGATAGAAACCGAACAGTTC+GGG - chr7_2:1869592-1869611 None:intergenic 40.0%
GAGATAGAAACCGAACAGTT+CGG - chr7_2:1869593-1869612 None:intergenic 40.0%
CTCCCAAACGTTATGTTTAG+GGG + chr7_2:1869610-1869629 Msa1043690:intron 40.0%
TGCCCCTAAACATAACGTTT+GGG - chr7_2:1869615-1869634 None:intergenic 40.0%
TTGCCCCTAAACATAACGTT+TGG - chr7_2:1869616-1869635 None:intergenic 40.0%
! TAGGGGCAAAAACGGTATTT+TGG + chr7_2:1869627-1869646 Msa1043690:intron 40.0%
! AGGGGCAAAAACGGTATTTT+GGG + chr7_2:1869628-1869647 Msa1043690:intron 40.0%
CAAAATTGAAGAGGATGCCT+AGG - chr7_2:1869795-1869814 None:intergenic 40.0%
!! TGTACTGATTTAAGGCATGG+AGG + chr7_2:1869813-1869832 Msa1043690:intron 40.0%
!! GTACTGATTTAAGGCATGGA+GGG + chr7_2:1869814-1869833 Msa1043690:intron 40.0%
!! GGTAATCTAGGGTTTTGGTA+GGG - chr7_2:1869885-1869904 None:intergenic 40.0%
!! AGGTAATCTAGGGTTTTGGT+AGG - chr7_2:1869886-1869905 None:intergenic 40.0%
ACCAAAACCCTAGATTACCT+TGG + chr7_2:1869886-1869905 Msa1043690:intron 40.0%
CCAAAACCCTAGATTACCTT+GGG + chr7_2:1869887-1869906 Msa1043690:intron 40.0%
!!! GCATTTTGGCTCCAAAAGAA+GGG - chr7_2:1869930-1869949 None:intergenic 40.0%
!!! TGCATTTTGGCTCCAAAAGA+AGG - chr7_2:1869931-1869950 None:intergenic 40.0%
GACCAAACAAACACACATCA+AGG - chr7_2:1870013-1870032 None:intergenic 40.0%
AAGAGAGGGAAAGAGAGTTT+GGG - chr7_2:1870214-1870233 None:intergenic 40.0%
AAAGAGAGGGAAAGAGAGTT+TGG - chr7_2:1870215-1870234 None:intergenic 40.0%
GGAAGAATAAGCTGTCGTAT+GGG - chr7_2:1870242-1870261 None:intergenic 40.0%
TCTGGGGAGAAATTTGAAGA+TGG - chr7_2:1870277-1870296 None:intergenic 40.0%
GTTCTTCTTGTTACACACAG+AGG - chr7_2:1870322-1870341 None:intergenic 40.0%
AGGAAGGAAAGAAGAAGGTA+GGG - chr7_2:1870355-1870374 None:intergenic 40.0%
AAGGAAGGAAAGAAGAAGGT+AGG - chr7_2:1870356-1870375 None:intergenic 40.0%
GATCAAGGAAGGAAAGAAGA+AGG - chr7_2:1870360-1870379 None:intergenic 40.0%
TGAACCAGATGATTTGAAGG+AGG - chr7_2:1870411-1870430 None:intergenic 40.0%
GGTTGAACCAGATGATTTGA+AGG - chr7_2:1870414-1870433 None:intergenic 40.0%
TGAATCGCCGATAATTCCAA+CGG + chr7_2:1870784-1870803 Msa1043690:intron 40.0%
! CAGGATATTGCATCTTTTGG+TGG + chr7_2:1870889-1870908 Msa1043690:intron 40.0%
!!! TGCATCTTTTGGTGGATTAG+AGG + chr7_2:1870897-1870916 Msa1043690:intron 40.0%
!! TCATAATCAATGCCGGTTCA+TGG - chr7_2:1870948-1870967 None:intergenic 40.0%
!! GAACCGGCATTGATTATGAA+AGG + chr7_2:1870949-1870968 Msa1043690:intron 40.0%
!!! CGTTTTGTTTCAATCTCTGC+AGG - chr7_2:1871265-1871284 None:intergenic 40.0%
AATGCAATCTCACGTGCATA+AGG - chr7_2:1871303-1871322 None:intergenic 40.0%
GGCACCTTATACTCAAAACA+TGG - chr7_2:1871401-1871420 None:intergenic 40.0%
! TTGGGACTTTTCAAAGGTTG+TGG + chr7_2:1871507-1871526 Msa1043690:intron 40.0%
!! GGTTTGCTACAACTATCTTC+AGG - chr7_2:1871628-1871647 None:intergenic 40.0%
TTAGCTCCTGGAATAGGTAT+GGG - chr7_2:1871649-1871668 None:intergenic 40.0%
! TTTAGCTCCTGGAATAGGTA+TGG - chr7_2:1871650-1871669 None:intergenic 40.0%
! TCATGTTTAGCTCCTGGAAT+AGG - chr7_2:1871655-1871674 None:intergenic 40.0%
! TCTAGATCATGTTTAGCTCC+TGG - chr7_2:1871661-1871680 None:intergenic 40.0%
CAAAGGTAACATCTTGGTCT+TGG + chr7_2:1871730-1871749 Msa1043690:intron 40.0%
CTTGGAATGAATAGGGATGT+AGG + chr7_2:1871748-1871767 Msa1043690:intron 40.0%
AAAAGAGAATTAGAAGGCCC+TGG + chr7_2:1871805-1871824 Msa1043690:intron 40.0%
! GTTTGCAATGTTACTTGCCT+TGG - chr7_2:1872042-1872061 None:intergenic 40.0%
GTTGAAGTGATAGACAACAC+CGG + chr7_2:1872149-1872168 Msa1043690:intron 40.0%
TTTGCATTTCACCTCACTCA+TGG - chr7_2:1872249-1872268 None:intergenic 40.0%
AGCAGTAGTTTCCTACGAAA+TGG - chr7_2:1872367-1872386 None:intergenic 40.0%
ACTCCTACTAGCAAAACTCT+GGG + chr7_2:1872942-1872961 Msa1043690:CDS 40.0%
! TTTCCCAGAGTTTTGCTAGT+AGG - chr7_2:1872948-1872967 None:intergenic 40.0%
! TACTAGCAAAACTCTGGGAA+AGG + chr7_2:1872947-1872966 Msa1043690:CDS 40.0%
TCATTGGACGATATTGTGCT+AGG + chr7_2:1872990-1873009 Msa1043690:CDS 40.0%
!! TTGTGATGGATTGAGCACAA+AGG + chr7_2:1873016-1873035 Msa1043690:CDS 40.0%
!! TGTGATGGATTGAGCACAAA+GGG + chr7_2:1873017-1873036 Msa1043690:CDS 40.0%
! CTTGAAGCAGGCACAATTTT+CGG - chr7_2:1873044-1873063 None:intergenic 40.0%
GTGTCTGATGGAAATGCTAA+GGG + chr7_2:1873083-1873102 Msa1043690:CDS 40.0%
AAATGCTAAGGGTTCGAAAC+TGG + chr7_2:1873094-1873113 Msa1043690:intron 40.0%
CCAACATCAACATCAATGAC+AGG - chr7_2:1873218-1873237 None:intergenic 40.0%
CCTGTCATTGATGTTGATGT+TGG + chr7_2:1873215-1873234 Msa1043690:CDS 40.0%
!! TGTTGATGTTGGTGATAGTG+TGG + chr7_2:1873226-1873245 Msa1043690:CDS 40.0%
AAAGGAAAGGACAACAGACT+TGG - chr7_2:1873351-1873370 None:intergenic 40.0%
!! GACATTTCTAGTACAACGCA+TGG - chr7_2:1873544-1873563 None:intergenic 40.0%
! ATCTTATGGCAGATGGACTT+TGG - chr7_2:1873993-1874012 None:intergenic 40.0%
TAATAGGTGACAGCAGTGTA+CGG - chr7_2:1874166-1874185 None:intergenic 40.0%
CTTCATCCCCAATGTGATTT+AGG + chr7_2:1874411-1874430 Msa1043690:intron 40.0%
GATTTGAAGGATGTCGAAAG+AGG + chr7_2:1874458-1874477 Msa1043690:intron 40.0%
GTCGAAAGAGGAAGTGAAAA+CGG + chr7_2:1874470-1874489 Msa1043690:CDS 40.0%
! TGCTTCTTCAAAACGGATTC+AGG - chr7_2:1874501-1874520 None:intergenic 40.0%
!!! CCGTTTTGAAGAAGCAGAAA+AGG + chr7_2:1874505-1874524 Msa1043690:CDS 40.0%
AGCAGAAAAGGAACGAAGAA+TGG + chr7_2:1874517-1874536 Msa1043690:CDS 40.0%
GCAGAAAAGGAACGAAGAAT+GGG + chr7_2:1874518-1874537 Msa1043690:CDS 40.0%
AGAAGAAGAGAGCTGAAACA+AGG + chr7_2:1874574-1874593 Msa1043690:CDS 40.0%
CACATCAAGATAAGCACTTG+TGG - chr7_2:1874865-1874884 None:intergenic 40.0%
! TAAGTAGGGCCTGATTTGAT+TGG - chr7_2:1875086-1875105 None:intergenic 40.0%
AAGCGTGAAGCTAAACTCAA+GGG + chr7_2:1875294-1875313 Msa1043690:intron 40.0%
TGAACAAGAGCTTAGCTTCA+GGG - chr7_2:1875335-1875354 None:intergenic 40.0%
ATGAACAAGAGCTTAGCTTC+AGG - chr7_2:1875336-1875355 None:intergenic 40.0%
TGCAATGCACCTCTGATTAA+AGG + chr7_2:1875761-1875780 Msa1043690:intron 40.0%
GTCATAGGTACACTTAACAG+TGG - chr7_2:1875883-1875902 None:intergenic 40.0%
AGCATAGAAAGACTGTTCCA+AGG + chr7_2:1876077-1876096 Msa1043690:intron 40.0%
GCATAGAAAGACTGTTCCAA+GGG + chr7_2:1876078-1876097 Msa1043690:intron 40.0%
TTCGCAAATCTGGAGAGAAA+GGG - chr7_2:1876938-1876957 None:intergenic 40.0%
CGAAGACTCAAAAAAGCAGT+AGG + chr7_2:1876954-1876973 Msa1043690:intron 40.0%
! GTTTGGTTCAGCAGAGAATT+AGG - chr7_2:1877004-1877023 None:intergenic 40.0%
TCTAACACTGTGTTTGGTAG+AGG - chr7_2:1877088-1877107 None:intergenic 40.0%
ATGGACTCTAACACTGTGTT+TGG - chr7_2:1877094-1877113 None:intergenic 40.0%
!! CTGCTATAATGGGTCTATCA+AGG - chr7_2:1877117-1877136 None:intergenic 40.0%
TGATAGACCCATTATAGCAG+AGG + chr7_2:1877117-1877136 Msa1043690:intron 40.0%
TCAGGGAATTGATCTACAAG+AGG + chr7_2:1877322-1877341 Msa1043690:CDS 40.0%
CAGGGAATTGATCTACAAGA+GGG + chr7_2:1877323-1877342 Msa1043690:CDS 40.0%
AGGGAATTGATCTACAAGAG+GGG + chr7_2:1877324-1877343 Msa1043690:CDS 40.0%
TCTTTACTGTCAGACCTAGA+TGG + chr7_2:1877454-1877473 Msa1043690:intron 40.0%
!! CTGTTCTAGCTTGAGCAAAT+AGG - chr7_2:1877513-1877532 None:intergenic 40.0%
AACAGTCCAGATTCTGTGTA+TGG + chr7_2:1877528-1877547 Msa1043690:intron 40.0%
ACAACACCATACACAGAATC+TGG - chr7_2:1877537-1877556 None:intergenic 40.0%
TTCTTCTTCATACCACCTAG+GGG - chr7_2:1877734-1877753 None:intergenic 40.0%
ACATCAACGAACTCATCAGA+AGG + chr7_2:1877801-1877820 Msa1043690:CDS 40.0%
TGACACAAGAGCAACTCCAA+TGG - chr7_2:1866348-1866367 None:intergenic 45.0%
AGACCTACAAAGGCTCTGTT+TGG - chr7_2:1866691-1866710 None:intergenic 45.0%
CGAAAGAGGTAACATTAGGG+AGG - chr7_2:1867226-1867245 None:intergenic 45.0%
! TAAAATGTGGCAGTGTTGGG+CGG - chr7_2:1867345-1867364 None:intergenic 45.0%
! CAACATCAAAGGAAGTACGC+GGG + chr7_2:1868373-1868392 Msa1043690:intron 45.0%
GAGAGGAGAAGAGTGAAACT+TGG - chr7_2:1868570-1868589 None:intergenic 45.0%
! CCTTTGGATGGTTGGTCAAT+AGG - chr7_2:1869042-1869061 None:intergenic 45.0%
CCTATTGACCAACCATCCAA+AGG + chr7_2:1869039-1869058 Msa1043690:intron 45.0%
CAACGTCCTAATCTCATTGG+TGG - chr7_2:1869066-1869085 None:intergenic 45.0%
CACCAATGAGATTAGGACGT+TGG + chr7_2:1869064-1869083 Msa1043690:intron 45.0%
CTCCAACGTCCTAATCTCAT+TGG - chr7_2:1869069-1869088 None:intergenic 45.0%
CAATGAGATTAGGACGTTGG+AGG + chr7_2:1869067-1869086 Msa1043690:intron 45.0%
TAGGGGCTAGAGAACAATTG+GGG - chr7_2:1869280-1869299 None:intergenic 45.0%
GTTAGGGGCTAGAGAACAAT+TGG - chr7_2:1869282-1869301 None:intergenic 45.0%
CATTTGCAACACCTTGCGTT+TGG + chr7_2:1869431-1869450 Msa1043690:intron 45.0%
GGTGTACAACCATTCTACTC+CGG + chr7_2:1869486-1869505 Msa1043690:intron 45.0%
GTGTACAACCATTCTACTCC+GGG + chr7_2:1869487-1869506 Msa1043690:intron 45.0%
ACAAGAAACCCGGAGTAGAA+TGG - chr7_2:1869498-1869517 None:intergenic 45.0%
GGCAAAATGCACAAGAAACC+CGG - chr7_2:1869508-1869527 None:intergenic 45.0%
CTCGATAGAAGGAACCATTC+GGG + chr7_2:1869530-1869549 Msa1043690:intron 45.0%
GAGATAACTCCCGAACTGTT+CGG + chr7_2:1869580-1869599 Msa1043690:intron 45.0%
! GGGGCAAAAACGGTATTTTG+GGG + chr7_2:1869629-1869648 Msa1043690:intron 45.0%
!! GGGCAAAAACGGTATTTTGG+GGG + chr7_2:1869630-1869649 Msa1043690:intron 45.0%
! TAGGGTTTTGCTAGGGCTTT+GGG - chr7_2:1869776-1869795 None:intergenic 45.0%
TACCTCAGCTTCAAACCCTA+GGG - chr7_2:1869843-1869862 None:intergenic 45.0%
TTACCTCAGCTTCAAACCCT+AGG - chr7_2:1869844-1869863 None:intergenic 45.0%
!! CCCAAGGTAATCTAGGGTTT+TGG - chr7_2:1869890-1869909 None:intergenic 45.0%
CCAAAATGCAAAGCCATGTG+CGG + chr7_2:1869941-1869960 Msa1043690:intron 45.0%
! GAGTCTGCAGAGTACTCAAT+TGG + chr7_2:1869963-1869982 Msa1043690:intron 45.0%
GTTTGGTCGGCAATGTGAAT+TGG + chr7_2:1870025-1870044 Msa1043690:intron 45.0%
GTCGGCAATGTGAATTGGTT+TGG + chr7_2:1870030-1870049 Msa1043690:intron 45.0%
AGCCAATAGGAGTAAAGGGT+CGG + chr7_2:1870071-1870090 Msa1043690:intron 45.0%
AACCGACCCTTTACTCCTAT+TGG - chr7_2:1870076-1870095 None:intergenic 45.0%
TCGTATGGGAGAGAAAGAGA+GGG - chr7_2:1870228-1870247 None:intergenic 45.0%
GGGAAGAATAAGCTGTCGTA+TGG - chr7_2:1870243-1870262 None:intergenic 45.0%
!! TTGAAGATGGATTGGGAGGA+GGG - chr7_2:1870264-1870283 None:intergenic 45.0%
!! TTTGAAGATGGATTGGGAGG+AGG - chr7_2:1870265-1870284 None:intergenic 45.0%
TGTTACACACAGAGGAGAGT+GGG - chr7_2:1870314-1870333 None:intergenic 45.0%
TTGTTACACACAGAGGAGAG+TGG - chr7_2:1870315-1870334 None:intergenic 45.0%
AAGGAAAGAAGAAGGTAGGG+AGG - chr7_2:1870352-1870371 None:intergenic 45.0%
GATGATTTGAAGGAGGCGAT+GGG - chr7_2:1870404-1870423 None:intergenic 45.0%
AGATGATTTGAAGGAGGCGA+TGG - chr7_2:1870405-1870424 None:intergenic 45.0%
ATCGCCTCCTTCAAATCATC+TGG + chr7_2:1870404-1870423 Msa1043690:intron 45.0%
! CGGTGATTTGTAACAGAGAG+GGG - chr7_2:1870449-1870468 None:intergenic 45.0%
! CCGGTGATTTGTAACAGAGA+GGG - chr7_2:1870450-1870469 None:intergenic 45.0%
CCCTCTCTGTTACAAATCAC+CGG + chr7_2:1870447-1870466 Msa1043690:intron 45.0%
TGAGAAGGTGATGCTTTGAC+TGG + chr7_2:1871115-1871134 Msa1043690:intron 45.0%
!! GACTGGTTTCTTTCCCCTTT+AGG + chr7_2:1871132-1871151 Msa1043690:intron 45.0%
ACGTGCATAAGGAGTAACGA+AGG - chr7_2:1871292-1871311 None:intergenic 45.0%
! GTGGTATGAAGCTTGGTCTT+AGG + chr7_2:1871454-1871473 Msa1043690:intron 45.0%
TCAGGCAGCAAGACAACATA+GGG - chr7_2:1871610-1871629 None:intergenic 45.0%
TTCAGGCAGCAAGACAACAT+AGG - chr7_2:1871611-1871630 None:intergenic 45.0%
AGCAAACCCATACCTATTCC+AGG + chr7_2:1871640-1871659 Msa1043690:intron 45.0%
! AGGCCCTGGATCACATTTTA+AGG + chr7_2:1871819-1871838 Msa1043690:intron 45.0%
GTCGTGCATGATTGAGAAAG+AGG + chr7_2:1871932-1871951 Msa1043690:intron 45.0%
GAGTATGCGCTTATGATGAC+AGG + chr7_2:1872114-1872133 Msa1043690:intron 45.0%
CTCACTCATGGCATCAAGAT+AGG - chr7_2:1872237-1872256 None:intergenic 45.0%
CTATCTTGATGCCATGAGTG+AGG + chr7_2:1872235-1872254 Msa1043690:intron 45.0%
ATGCCAACCTGTATCGCAAT+TGG + chr7_2:1872454-1872473 Msa1043690:CDS 45.0%
TGGTCGTTACACTTATGCCA+TGG - chr7_2:1872542-1872561 None:intergenic 45.0%
ATTTGTACAGCTAGCACACG+AGG + chr7_2:1872633-1872652 Msa1043690:intron 45.0%
GTTAGCTGATCAAAAGCCAC+TGG + chr7_2:1872690-1872709 Msa1043690:CDS 45.0%
GACTCCTACTAGCAAAACTC+TGG + chr7_2:1872941-1872960 Msa1043690:CDS 45.0%
TTGGACGATATTGTGCTAGG+TGG + chr7_2:1872993-1873012 Msa1043690:CDS 45.0%
ATTGTGCTAGGTGGTTGTGA+TGG + chr7_2:1873002-1873021 Msa1043690:CDS 45.0%
AAGTGCTAAGGGTTCGAAAC+TGG + chr7_2:1873061-1873080 Msa1043690:CDS 45.0%
GGTGTCTGATGGAAATGCTA+AGG + chr7_2:1873082-1873101 Msa1043690:CDS 45.0%
TATGGATGAAGGATCTGCAG+AGG + chr7_2:1873133-1873152 Msa1043690:intron 45.0%
TCAACAGCTCTCTTTCCCAA+TGG - chr7_2:1873185-1873204 None:intergenic 45.0%
! ACCTTCACACAGACCAGTTT+TGG - chr7_2:1873269-1873288 None:intergenic 45.0%
TTGGACATCATCAACGCAAC+TGG - chr7_2:1873332-1873351 None:intergenic 45.0%
TCAGTTATGACCTCCTGTTG+TGG + chr7_2:1873403-1873422 Msa1043690:intron 45.0%
CTAACAAAAGACGCCACAAC+AGG - chr7_2:1873419-1873438 None:intergenic 45.0%
! GCGTCTTTTGTTAGTGTCAG+TGG + chr7_2:1873425-1873444 Msa1043690:intron 45.0%
ACTACATCAGTCCCTATGTC+AGG - chr7_2:1873589-1873608 None:intergenic 45.0%
!! AGGCATGCCACTTTGATGAT+GGG + chr7_2:1873742-1873761 Msa1043690:intron 45.0%
! TTTTACCTTGCCGCAGTAGA+TGG - chr7_2:1874311-1874330 None:intergenic 45.0%
GAAAGAGGAAGTGAAAACGG+TGG + chr7_2:1874473-1874492 Msa1043690:CDS 45.0%
AAGGAACGAAGAATGGGCAT+TGG + chr7_2:1874524-1874543 Msa1043690:CDS 45.0%
ATTGGTGAAGAAGCAGGAAC+AGG + chr7_2:1874542-1874561 Msa1043690:CDS 45.0%
TAGAGCCAAACAATACGCCA+AGG + chr7_2:1874611-1874630 Msa1043690:intron 45.0%
CGCCAAGGAATATGATGATC+AGG + chr7_2:1874626-1874645 Msa1043690:intron 45.0%
! TGCAGCAAAAGGAGTTGATC+AGG + chr7_2:1875268-1875287 Msa1043690:intron 45.0%
GAAGCGTGAAGCTAAACTCA+AGG + chr7_2:1875293-1875312 Msa1043690:intron 45.0%
ACGCTATGGACCCAAAATCA+AGG + chr7_2:1875485-1875504 Msa1043690:CDS 45.0%
TAGAAAGACTGTTCCAAGGG+AGG + chr7_2:1876081-1876100 Msa1043690:intron 45.0%
ACTAGCAAAACAACCTCCCT+TGG - chr7_2:1876097-1876116 None:intergenic 45.0%
CTTACGGCAATCATGTGTGT+TGG + chr7_2:1876811-1876830 Msa1043690:intron 45.0%
CTTCGCAAATCTGGAGAGAA+AGG - chr7_2:1876939-1876958 None:intergenic 45.0%
TAACATAAGGCTCAACCCTG+TGG - chr7_2:1877275-1877294 None:intergenic 45.0%
GGGTACCCGTATGTAACATA+AGG - chr7_2:1877288-1877307 None:intergenic 45.0%
TTGATCTACAAGAGGGGCTA+CGG + chr7_2:1877330-1877349 Msa1043690:CDS 45.0%
ACTGTCAGACCTAGATGGAA+TGG + chr7_2:1877459-1877478 Msa1043690:intron 45.0%
ACTGACATTATCCAATGGGC+AGG + chr7_2:1877595-1877614 Msa1043690:intron 45.0%
TTATCCAATGGGCAGGTTCT+TGG + chr7_2:1877602-1877621 Msa1043690:intron 45.0%
TATCCAATGGGCAGGTTCTT+GGG + chr7_2:1877603-1877622 Msa1043690:intron 45.0%
!! TTGTTTGCCTCTCTGAAGTG+AGG - chr7_2:1877683-1877702 None:intergenic 45.0%
! ATTTAGTTCATGGCCTTGCC+TGG + chr7_2:1877955-1877974 Msa1043690:three_prime_UTR 45.0%
! TTTTCACTGCATTCCAGGCA+AGG - chr7_2:1877971-1877990 None:intergenic 45.0%
!! AAAAAAATTAAGAAAAAAAT+TGG - chr7_2:1866736-1866755 None:intergenic 5.0%
!!! TAATAACTATATTTATTTTA+AGG - chr7_2:1867833-1867852 None:intergenic 5.0%
!! AAAAAAAAAGTTAAAAAATA+AGG - chr7_2:1868751-1868770 None:intergenic 5.0%
!! ATAATAATAATGAATAATTA+AGG - chr7_2:1874390-1874409 None:intergenic 5.0%
!! AATAATTGTATAAATTAAAA+AGG - chr7_2:1875231-1875250 None:intergenic 5.0%
!!! TTTTTTTTTATCAATTAAAA+TGG + chr7_2:1876743-1876762 Msa1043690:intron 5.0%
GACGTGACTCTCATTCATCG+AGG - chr7_2:1865853-1865872 None:intergenic 50.0%
ATGTTAAAGGGAGGGAGGGA+GGG - chr7_2:1868603-1868622 None:intergenic 50.0%
TATGTTAAAGGGAGGGAGGG+AGG - chr7_2:1868604-1868623 None:intergenic 50.0%
ATGGTCAGAGGAGATTCAGG+TGG - chr7_2:1868693-1868712 None:intergenic 50.0%
!! AAGCTTGTTGGCATGGTCAG+AGG - chr7_2:1868705-1868724 None:intergenic 50.0%
!! TGCACGTAAGCTTGTTGGCA+TGG - chr7_2:1868712-1868731 None:intergenic 50.0%
TAGGGTGCACGTAAGCTTGT+TGG - chr7_2:1868717-1868736 None:intergenic 50.0%
! TTGGTGGACCTTTGGATGGT+TGG - chr7_2:1869050-1869069 None:intergenic 50.0%
! CTCATTGGTGGACCTTTGGA+TGG - chr7_2:1869054-1869073 None:intergenic 50.0%
TAGAGAACAATTGGGGGTGG+GGG - chr7_2:1869273-1869292 None:intergenic 50.0%
CTAGAGAACAATTGGGGGTG+GGG - chr7_2:1869274-1869293 None:intergenic 50.0%
GCTAGAGAACAATTGGGGGT+GGG - chr7_2:1869275-1869294 None:intergenic 50.0%
AGGGGCTAGAGAACAATTGG+GGG - chr7_2:1869279-1869298 None:intergenic 50.0%
GTTGGAGGAAACCAAACGCA+AGG - chr7_2:1869445-1869464 None:intergenic 50.0%
GGGAGTTATCTCCCGTTTCT+TGG - chr7_2:1869572-1869591 None:intergenic 50.0%
!! AAAACGGTATTTTGGGGGCC+TGG + chr7_2:1869635-1869654 Msa1043690:intron 50.0%
!! AAACGGTATTTTGGGGGCCT+GGG + chr7_2:1869636-1869655 Msa1043690:intron 50.0%
GGACTGACATGTTATGGGCT+GGG - chr7_2:1869712-1869731 None:intergenic 50.0%
TGGACTGACATGTTATGGGC+TGG - chr7_2:1869713-1869732 None:intergenic 50.0%
! AGGGTTTTGCTAGGGCTTTG+GGG - chr7_2:1869775-1869794 None:intergenic 50.0%
! CTAGGGTTTTGCTAGGGCTT+TGG - chr7_2:1869777-1869796 None:intergenic 50.0%
CAAAGCCCTAGCAAAACCCT+AGG + chr7_2:1869775-1869794 Msa1043690:intron 50.0%
! GGATGCCTAGGGTTTTGCTA+GGG - chr7_2:1869783-1869802 None:intergenic 50.0%
! AGGATGCCTAGGGTTTTGCT+AGG - chr7_2:1869784-1869803 None:intergenic 50.0%
! AACCCTAGGGTTTGAAGCTG+AGG + chr7_2:1869838-1869857 Msa1043690:intron 50.0%
!! CCGCACATGGCTTTGCATTT+TGG - chr7_2:1869944-1869963 None:intergenic 50.0%
GAGCAGTTGGAGTAAAGGGT+CGG + chr7_2:1870111-1870130 Msa1043690:intron 50.0%
GTCGTATGGGAGAGAAAGAG+AGG - chr7_2:1870229-1870248 None:intergenic 50.0%
!! TGAAGATGGATTGGGAGGAG+GGG - chr7_2:1870263-1870282 None:intergenic 50.0%
TGTAACAGAGAGGGGAGAAG+TGG - chr7_2:1870441-1870460 None:intergenic 50.0%
! GCCGGTGATTTGTAACAGAG+AGG - chr7_2:1870451-1870470 None:intergenic 50.0%
GTGACAAGTGTAGCCTACCA+AGG + chr7_2:1872007-1872026 Msa1043690:intron 50.0%
TTGGCACAACAGTCCTTGGT+AGG - chr7_2:1872023-1872042 None:intergenic 50.0%
TACCAAGGACTGTTGTGCCA+AGG + chr7_2:1872022-1872041 Msa1043690:intron 50.0%
! TTGGGTTGTGTCTCAAGCTG+TGG + chr7_2:1872196-1872215 Msa1043690:intron 50.0%
TGGGTTGTGTCTCAAGCTGT+GGG + chr7_2:1872197-1872216 Msa1043690:intron 50.0%
AACCTGTATCGCAATTGGCG+CGG + chr7_2:1872459-1872478 Msa1043690:CDS 50.0%
TGTGCCTGCTTCAAGTGCTA+AGG + chr7_2:1873049-1873068 Msa1043690:CDS 50.0%
GTGCCTGCTTCAAGTGCTAA+GGG + chr7_2:1873050-1873069 Msa1043690:CDS 50.0%
GAACCCTTAGCACTTGAAGC+AGG - chr7_2:1873056-1873075 None:intergenic 50.0%
GGTTCGAAACTGGTGTCTGA+TGG + chr7_2:1873071-1873090 Msa1043690:CDS 50.0%
TAGTGTGGCTTCGACTGCAA+AGG + chr7_2:1873241-1873260 Msa1043690:CDS 50.0%
GACTGCAAAGGAGCCAAAAC+TGG + chr7_2:1873253-1873272 Msa1043690:CDS 50.0%
! GCCAAAACTGGTCTGTGTGA+AGG + chr7_2:1873265-1873284 Msa1043690:intron 50.0%
ACAAAAGACGCCACAACAGG+AGG - chr7_2:1873416-1873435 None:intergenic 50.0%
!! CAGGCATGCCACTTTGATGA+TGG + chr7_2:1873741-1873760 Msa1043690:intron 50.0%
TCGCGCGGGTCTGTTATAAT+AGG - chr7_2:1874182-1874201 None:intergenic 50.0%
CTCTCCATCTCCATCTACTG+CGG + chr7_2:1874298-1874317 Msa1043690:CDS 50.0%
!! ATGGGCATTGGTGAAGAAGC+AGG + chr7_2:1874536-1874555 Msa1043690:CDS 50.0%
CGTGAAGCTAAACTCAAGGG+TGG + chr7_2:1875297-1875316 Msa1043690:intron 50.0%
!! GCAGCTTTTGCGTTTGAGAC+AGG + chr7_2:1875516-1875535 Msa1043690:CDS 50.0%
GAAGAGAGACAGACAGACGT+GGG - chr7_2:1876981-1877000 None:intergenic 50.0%
TACCGTGAACATGCTCCACA+GGG + chr7_2:1877257-1877276 Msa1043690:CDS 50.0%
AACCCTGTGGAGCATGTTCA+CGG - chr7_2:1877262-1877281 None:intergenic 50.0%
!! ACCCTAATCTGAAGAGCGTC+AGG + chr7_2:1877304-1877323 Msa1043690:CDS 50.0%
CCCTGACGCTCTTCAGATTA+GGG - chr7_2:1877308-1877327 None:intergenic 50.0%
!! CCCTAATCTGAAGAGCGTCA+GGG + chr7_2:1877305-1877324 Msa1043690:CDS 50.0%
TCCCTGACGCTCTTCAGATT+AGG - chr7_2:1877309-1877328 None:intergenic 50.0%
AGTTGGTCCTCACTTCAGAG+AGG + chr7_2:1877673-1877692 Msa1043690:CDS 50.0%
GAGAGGCAAACAACTTCCTG+TGG + chr7_2:1877690-1877709 Msa1043690:CDS 50.0%
CTTTGAGCTTGAAAGGCCAC+AGG - chr7_2:1877709-1877728 None:intergenic 50.0%
!! AGGGGAGCTTTGAGCTTGAA+AGG - chr7_2:1877716-1877735 None:intergenic 50.0%
TTCAAGCTCAAAGCTCCCCT+AGG + chr7_2:1877716-1877735 Msa1043690:CDS 50.0%
! TATGTGGAAGGTGGTGATGC+TGG + chr7_2:1877764-1877783 Msa1043690:CDS 50.0%
! AAGGTGGTGATGCTGGAAAC+AGG + chr7_2:1877771-1877790 Msa1043690:CDS 50.0%
! AGGTGGTGATGCTGGAAACA+GGG + chr7_2:1877772-1877791 Msa1043690:CDS 50.0%
GGCATGGTCAGAGGAGATTC+AGG - chr7_2:1868696-1868715 None:intergenic 55.0%
GGCTAGAGAACAATTGGGGG+TGG - chr7_2:1869276-1869295 None:intergenic 55.0%
AAGGCATGGAGGGAAACCCT+AGG + chr7_2:1869824-1869843 Msa1043690:intron 55.0%
AGGCATGGAGGGAAACCCTA+GGG + chr7_2:1869825-1869844 Msa1043690:intron 55.0%
TACTCTGCAGACTCCGCACA+TGG - chr7_2:1869957-1869976 None:intergenic 55.0%
!! GGAGAGAGGGTTGGTTTCTG+GGG - chr7_2:1870293-1870312 None:intergenic 55.0%
!! GGGAGAGAGGGTTGGTTTCT+GGG - chr7_2:1870294-1870313 None:intergenic 55.0%
!! TGGGAGAGAGGGTTGGTTTC+TGG - chr7_2:1870295-1870314 None:intergenic 55.0%
ACAGAGGAGAGTGGGAGAGA+GGG - chr7_2:1870306-1870325 None:intergenic 55.0%
AAGGAGGCGATGGGTAGAAG+AGG - chr7_2:1870395-1870414 None:intergenic 55.0%
AACAGAGAGGGGAGAAGTGG+TGG - chr7_2:1870438-1870457 None:intergenic 55.0%
!! TGCCGAAGTTGTTGGTGGTG+CGG - chr7_2:1870473-1870492 None:intergenic 55.0%
ATTAGAGGAGCAAGTCGCCG+TGG + chr7_2:1870912-1870931 Msa1043690:intron 55.0%
TGCCTTGGCACAACAGTCCT+TGG - chr7_2:1872027-1872046 None:intergenic 55.0%
GCGCCAATTGCGATACAGGT+TGG - chr7_2:1872460-1872479 None:intergenic 55.0%
TGTACAGCTAGCACACGAGG+AGG + chr7_2:1872636-1872655 Msa1043690:intron 55.0%
CTTGCCGCAGTAGATGGAGA+TGG - chr7_2:1874305-1874324 None:intergenic 55.0%
CATCTCCATCTACTGCGGCA+AGG + chr7_2:1874303-1874322 Msa1043690:CDS 55.0%
GGAAGAGAGACAGACAGACG+TGG - chr7_2:1876982-1877001 None:intergenic 55.0%
CTACCGTGAACATGCTCCAC+AGG + chr7_2:1877256-1877275 Msa1043690:CDS 55.0%
CTTCCCAAGAACCTGCCCAT+TGG - chr7_2:1877609-1877628 None:intergenic 55.0%
AAGCTCAAAGCTCCCCTAGG+TGG + chr7_2:1877719-1877738 Msa1043690:CDS 55.0%
CCATGGAGTAAGAAGGGCGG+CGG - chr7_2:1867321-1867340 None:intergenic 60.0%
CGCCGCCCTTCTTACTCCAT+GGG + chr7_2:1867319-1867338 Msa1043690:intron 60.0%
GGCCCATGGAGTAAGAAGGG+CGG - chr7_2:1867324-1867343 None:intergenic 60.0%
GGCGGCCCATGGAGTAAGAA+GGG - chr7_2:1867327-1867346 None:intergenic 60.0%
GGGAGGGAACGTGTTTGGAG+AGG - chr7_2:1868587-1868606 None:intergenic 60.0%
AGGGAGGGAGGGAACGTGTT+TGG - chr7_2:1868592-1868611 None:intergenic 60.0%
! GGGGTGGGGGCACAAATTCA+CGG - chr7_2:1869260-1869279 None:intergenic 60.0%
TGACTCCCCTGTTTGCTCCC+AGG - chr7_2:1869656-1869675 None:intergenic 60.0%
AGGAGAGTGGGAGAGAGGGT+TGG - chr7_2:1870302-1870321 None:intergenic 60.0%
CACAGAGGAGAGTGGGAGAG+AGG - chr7_2:1870307-1870326 None:intergenic 60.0%
AGAGAGGGGAGAAGTGGTGG+AGG - chr7_2:1870435-1870454 None:intergenic 60.0%
!! GAAGTTGTTGGTGGTGCGGC+CGG - chr7_2:1870469-1870488 None:intergenic 60.0%
GGCCGCACCACCAACAACTT+CGG + chr7_2:1870468-1870487 Msa1043690:intron 60.0%
GCACCACCAACAACTTCGGC+AGG + chr7_2:1870472-1870491 Msa1043690:intron 60.0%
CCTCCTGCCGAAGTTGTTGG+TGG - chr7_2:1870478-1870497 None:intergenic 60.0%
CCACCAACAACTTCGGCAGG+AGG + chr7_2:1870475-1870494 Msa1043690:intron 60.0%
CCACCTCCTGCCGAAGTTGT+TGG - chr7_2:1870481-1870500 None:intergenic 60.0%
CCAACAACTTCGGCAGGAGG+TGG + chr7_2:1870478-1870497 Msa1043690:intron 60.0%
TTCATGGCCGACGTGCACCA+CGG - chr7_2:1870932-1870951 None:intergenic 60.0%
AGCCGCGCCAATTGCGATAC+AGG - chr7_2:1872464-1872483 None:intergenic 60.0%
ACAGCTAGCACACGAGGAGG+AGG + chr7_2:1872639-1872658 Msa1043690:intron 60.0%
GGGGCTACGGCAAAGTTGAC+AGG + chr7_2:1877343-1877362 Msa1043690:CDS 60.0%
GGGCAGGTTCTTGGGAAGCA+CGG + chr7_2:1877611-1877630 Msa1043690:intron 60.0%
CCGCCGCCCTTCTTACTCCA+TGG + chr7_2:1867318-1867337 Msa1043690:intron 65.0%
GGGCGGCCCATGGAGTAAGA+AGG - chr7_2:1867328-1867347 None:intergenic 65.0%
TTGGGGGCCTGGGAGCAAAC+AGG + chr7_2:1869646-1869665 Msa1043690:intron 65.0%
TGGGGGCCTGGGAGCAAACA+GGG + chr7_2:1869647-1869666 Msa1043690:intron 65.0%
CAAGTCGCCGTGGTGCACGT+CGG + chr7_2:1870922-1870941 Msa1043690:intron 65.0%
GGTGCACGTCGGCCATGAAC+CGG + chr7_2:1870933-1870952 Msa1043690:intron 65.0%
GCTAGCACACGAGGAGGAGG+AGG + chr7_2:1872642-1872661 Msa1043690:intron 65.0%
! TGGCAGTGTTGGGCGGCCCA+TGG - chr7_2:1867338-1867357 None:intergenic 70.0%
GGGGGCCTGGGAGCAAACAG+GGG + chr7_2:1869648-1869667 Msa1043690:intron 70.0%
AACAGACCCGCGCGACAGCG+CGG + chr7_2:1874187-1874206 Msa1043690:intron 70.0%
TTTGACCCGCGCTGTCGCGC+GGG - chr7_2:1874196-1874215 None:intergenic 70.0%
CTTTGACCCGCGCTGTCGCG+CGG - chr7_2:1874197-1874216 None:intergenic 70.0%
ACAGACCCGCGCGACAGCGC+GGG + chr7_2:1874188-1874207 Msa1043690:intron 75.0%
CGCGCGACAGCGCGGGTCAA+AGG + chr7_2:1874195-1874214 Msa1043690:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 1865810 1878041 1865810 ID=Msa1043690;Name=Msa1043690
chr7_2 mRNA 1865810 1878041 1865810 ID=Msa1043690-mRNA-1;Parent=Msa1043690;Name=Msa1043690-mRNA-1;_AED=0.24;_eAED=0.28;_QI=0|0.4|0.27|1|0.6|0.54|11|209|472
chr7_2 exon 1865810 1865869 1865810 ID=Msa1043690-mRNA-1:exon:359;Parent=Msa1043690-mRNA-1
chr7_2 exon 1872375 1872551 1872375 ID=Msa1043690-mRNA-1:exon:360;Parent=Msa1043690-mRNA-1
chr7_2 exon 1872643 1872711 1872643 ID=Msa1043690-mRNA-1:exon:361;Parent=Msa1043690-mRNA-1
chr7_2 exon 1872879 1873104 1872879 ID=Msa1043690-mRNA-1:exon:362;Parent=Msa1043690-mRNA-1
chr7_2 exon 1873144 1873274 1873144 ID=Msa1043690-mRNA-1:exon:363;Parent=Msa1043690-mRNA-1
chr7_2 exon 1874236 1874324 1874236 ID=Msa1043690-mRNA-1:exon:364;Parent=Msa1043690-mRNA-1
chr7_2 exon 1874467 1874609 1874467 ID=Msa1043690-mRNA-1:exon:365;Parent=Msa1043690-mRNA-1
chr7_2 exon 1875304 1875370 1875304 ID=Msa1043690-mRNA-1:exon:366;Parent=Msa1043690-mRNA-1
chr7_2 exon 1875480 1875537 1875480 ID=Msa1043690-mRNA-1:exon:367;Parent=Msa1043690-mRNA-1
chr7_2 exon 1877222 1877404 1877222 ID=Msa1043690-mRNA-1:exon:368;Parent=Msa1043690-mRNA-1
chr7_2 exon 1877617 1878041 1877617 ID=Msa1043690-mRNA-1:exon:369;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1865810 1865869 1865810 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1872375 1872551 1872375 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1872643 1872711 1872643 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1872879 1873104 1872879 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1873144 1873274 1873144 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1874236 1874324 1874236 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1874467 1874609 1874467 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1875304 1875370 1875304 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1875480 1875537 1875480 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1877222 1877404 1877222 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 CDS 1877617 1877832 1877617 ID=Msa1043690-mRNA-1:cds;Parent=Msa1043690-mRNA-1
chr7_2 three_prime_UTR 1877833 1878041 1877833 ID=Msa1043690-mRNA-1:three_prime_utr;Parent=Msa1043690-mRNA-1
Gene Sequence

>Msa1043690

ATGGAGTTTAAGGCAATGCATGTCATCATGTCAGACAAATCCTCGATGAATGAGAGTCACGAAACTACTGCTGCTGAATGCCCCCAAGATCTAAAAATGTTTGTTGACAAAAGAATGTTGTTCAAAGTTGAAGTCAGTGATGCCAACCTGTATCGCAATTGGCGCGGCTACACAGTCAAAAAGATGACTATGAACGACAGAATCATTAAGCAGATTATAGATCTCCATGGCATAAGTCTAGCACACGAGGAGGAGGAGGATGCTTATGTTGAAACACATTGTGAGTTAGCTGATCAAAAGCCACTGGAAACTGTTGAAGGAGTTGATTCAAGCAATAAGGATGATGTTGATGGAGTTGAGTCAGACGCGACTCCTACTAGCAAAACTCTGGGAAAGGCAGTTGATGTTAGTGTTCAGTCATTGGACGATATTGTGCTAGGTGGTTGTGATGGATTGAGCACAAAGGGTCCGAAAATTGTGCCTGCTTCAAGTGCTAAGGGTTCGAAACTGGTGTCTGATGGAAATGCTAAGGGATCTGCAGAGGATTTGATTGTGACTCAGACTAAAAATCCATTGGGAAAGAGAGCTGTTGATAGTGTTGTTCCTGTCATTGATGTTGATGTTGGTGATAGTGTGGCTTCGACTGCAAAGGAGCCAAAACTGGGCAGAGAAATACGAAGAAAGCATAAAATCAGAAGCTCAGTCCCAAACCCTAGTTTCATTTTCTCTCCATCTCCATCTACTGCGGCAAGGATGTCGAAAGAGGAAGTGAAAACGGTGGTTCCTGAATCCGTTTTGAAGAAGCAGAAAAGGAACGAAGAATGGGCATTGGTGAAGAAGCAGGAACAGGAATCAGCTAAGAAGAAGAGAGCTGAAACAAGGAAACTCATTTGGACTAAACTCAAGGGTGGATTTTATGTTGACCCTGAAGCTAAGCTCTTGTTCATTATTAGGATCAGAGGTATCAACGCTATGGACCCAAAATCAAGGAAGATTTTGCAGCTTTTGCGTTTGAGACAGATCTTTAATGGTGTCTTTCTCAAAGTTAACAAAGCTACCGTGAACATGCTCCACAGGGTTGAGCCTTATGTTACATACGGGTACCCTAATCTGAAGAGCGTCAGGGAATTGATCTACAAGAGGGGCTACGGCAAAGTTGACAGGCAGAGAATTGCTTTGACAGACAACTCAATCATTGAACAGGTTCTTGGGAAGCACGGTATCATCTGTATTGAAGATCTGATTCACGAGATACTAACAGTTGGTCCTCACTTCAGAGAGGCAAACAACTTCCTGTGGCCTTTCAAGCTCAAAGCTCCCCTAGGTGGTATGAAGAAGAAAAGAAATCATTATGTGGAAGGTGGTGATGCTGGAAACAGGGAAGACTACATCAACGAACTCATCAGAAGGATGAATTAG

Protein sequence

>Msa1043690

MEFKAMHVIMSDKSSMNESHETTAAECPQDLKMFVDKRMLFKVEVSDANLYRNWRGYTVKKMTMNDRIIKQIIDLHGISLAHEEEEDAYVETHCELADQKPLETVEGVDSSNKDDVDGVESDATPTSKTLGKAVDVSVQSLDDIVLGGCDGLSTKGPKIVPASSAKGSKLVSDGNAKGSAEDLIVTQTKNPLGKRAVDSVVPVIDVDVGDSVASTAKEPKLGREIRRKHKIRSSVPNPSFIFSPSPSTAARMSKEEVKTVVPESVLKKQKRNEEWALVKKQEQESAKKKRAETRKLIWTKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATVNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDRQRIALTDNSIIEQVLGKHGIICIEDLIHEILTVGPHFREANNFLWPFKLKAPLGGMKKKRNHYVEGGDAGNREDYINELIRRMN*