AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0642710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0642710 MtrunA17_Chr4g0027771 92.601 838 42 2 1 838 1 818 0.0 1480
Msa0642710 MtrunA17_Chr2g0320491 55.968 888 287 18 1 837 1 835 0.0 800
Msa0642710 MtrunA17_Chr2g0292551 52.421 826 248 20 54 831 2 730 0.0 660
Msa0642710 MtrunA17_Chr1g0197481 47.330 412 188 10 447 838 449 851 1.71e-96 320
Msa0642710 MtrunA17_Chr1g0197481 47.851 349 169 7 1 344 110 450 6.21e-76 264
Msa0642710 MtrunA17_Chr2g0296581 35.075 134 72 2 704 835 792 912 1.23e-16 84.7
Msa0642710 MtrunA17_Chr4g0052941 30.370 135 77 2 704 836 696 815 3.22e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0642710 AT2G27950.2 43.513 871 427 21 1 838 1 839 0.0 561
Msa0642710 AT2G27950.3 43.513 871 427 21 1 838 1 839 0.0 561
Msa0642710 AT2G27950.1 43.513 871 427 21 1 838 1 839 0.0 561
Msa0642710 AT5G04460.6 51.361 294 128 6 557 838 573 863 2.86e-79 274
Msa0642710 AT5G04460.6 45.938 357 169 8 1 340 111 460 1.87e-62 226
Msa0642710 AT5G04460.3 51.361 294 128 6 557 838 573 863 2.86e-79 274
Msa0642710 AT5G04460.3 45.938 357 169 8 1 340 111 460 1.87e-62 226
Msa0642710 AT5G04460.1 51.361 294 128 6 557 838 573 863 2.86e-79 274
Msa0642710 AT5G04460.1 45.938 357 169 8 1 340 111 460 1.87e-62 226
Msa0642710 AT5G04460.4 51.361 294 128 6 557 838 573 863 2.86e-79 274
Msa0642710 AT5G04460.4 45.938 357 169 8 1 340 111 460 1.87e-62 226
Msa0642710 AT5G04460.5 45.938 357 169 8 1 340 111 460 5.81e-63 226
Msa0642710 AT5G04460.5 43.590 156 74 5 557 700 573 726 1.91e-18 90.9
Msa0642710 AT5G04460.2 45.810 358 170 8 1 341 111 461 1.53e-62 226
Msa0642710 AT5G04460.2 49.219 256 115 6 557 800 573 825 6.18e-57 210
Msa0642710 AT4G20160.3 37.356 174 79 5 662 835 1065 1208 1.15e-27 121
Msa0642710 AT4G20160.2 37.356 174 79 5 662 835 1067 1210 1.20e-27 121
Msa0642710 AT2G34920.2 29.060 234 115 6 610 835 471 661 1.14e-20 97.8
Msa0642710 AT2G34920.1 28.821 229 108 7 610 835 471 647 3.13e-17 86.7
Msa0642710 AT1G30860.1 26.939 245 123 8 610 834 516 724 2.63e-16 84.0
Msa0642710 AT4G20160.1 33.333 144 64 6 662 805 1065 1176 5.81e-12 70.5

Find 247 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTCTTCCTTCACTTCT+AGG 0.111759 4_3:+44647048 Msa0642710:five_prime_UTR
CACTAGATGACAATTCTAAA+TGG 0.202577 4_3:+44653417 Msa0642710:CDS
CACCTCCTACTCCACCTCTT+TGG 0.211199 4_3:+44652956 Msa0642710:CDS
CTACTAACATAAGAGATAAT+AGG 0.236862 4_3:+44651905 Msa0642710:CDS
CCACGCCTCTCTCCTATATC+TGG 0.245680 4_3:-44648140 None:intergenic
AGTAGTGTTGAATCTTTAAA+AGG 0.262853 4_3:+44647614 Msa0642710:five_prime_UTR
CATCAGTTTGTAAGCTTTGT+TGG 0.266875 4_3:-44652143 None:intergenic
CCCTAGGAATTTCACTTCTT+CGG 0.278971 4_3:-44648355 None:intergenic
TGCATATCTCAAAATCAAAT+TGG 0.281342 4_3:+44654084 Msa0642710:three_prime_UTR
ACCTCCTACTCCACCTCTTT+GGG 0.283684 4_3:+44652957 Msa0642710:CDS
CCTAGGAATTTCACTTCTTC+GGG 0.284264 4_3:-44648354 None:intergenic
AGGAAAGGGTGAGAGTTATA+AGG 0.288014 4_3:+44648402 Msa0642710:CDS
GATTGCTTGCCTGACTCTTA+TGG 0.299988 4_3:+44654122 Msa0642710:three_prime_UTR
TCCAAGAGGCCGTGGAAAAT+TGG 0.303562 4_3:+44652526 Msa0642710:CDS
ATTTGCTTGGTTGGAAGTTT+TGG 0.308210 4_3:+44654307 Msa0642710:three_prime_UTR
CGCCGCAAATCATCATTATA+AGG 0.309008 4_3:-44647663 None:intergenic
GAGCAGCCACGTGCTGAAAT+TGG 0.317377 4_3:+44648479 Msa0642710:CDS
GGCAAGAAGCTTCTGAAGTT+TGG 0.318234 4_3:+44652487 Msa0642710:CDS
CTATTATCTCTTATGTTAGT+AGG 0.318995 4_3:-44651904 None:intergenic
GATAATAGGGCTGGGGTATC+TGG 0.324693 4_3:+44651919 Msa0642710:CDS
AGATCTCTTCAACCCATATA+TGG 0.329128 4_3:-44647832 None:intergenic
TCTCCTATATCTGGGCTATC+AGG 0.329204 4_3:-44648131 None:intergenic
GTACTTGAACGAAGGAATAA+TGG 0.338393 4_3:+44648077 Msa0642710:CDS
GTGTTTCTTCTGGGGAAAAC+AGG 0.339469 4_3:+44648456 Msa0642710:CDS
TTCAGGGAATGGATGAATAC+TGG 0.344453 4_3:+44648320 Msa0642710:CDS
TCCCCATCGCAATCGCATTC+AGG 0.349748 4_3:+44648688 Msa0642710:CDS
GCAGATGGGGCTGCATCTTC+CGG 0.352593 4_3:-44652850 None:intergenic
GGCCATTTGTGCACATGTTC+AGG 0.353626 4_3:+44653596 Msa0642710:CDS
GAATCTACTGCCCATGTAGA+AGG 0.357868 4_3:+44651988 Msa0642710:CDS
ACAGATCTGTTGACCATAAC+AGG 0.360955 4_3:+44649001 Msa0642710:CDS
CAGCAGAGAAGTGTTTCTTC+TGG 0.363031 4_3:+44648446 Msa0642710:CDS
AACTCTCACCCTTTCCTGTT+CGG 0.363975 4_3:-44648396 None:intergenic
CTCTTCTTCCTTCACTTCTA+GGG 0.367792 4_3:+44647049 Msa0642710:five_prime_UTR
TAATATTGACTTTACAATAA+AGG 0.368813 4_3:+44653707 Msa0642710:exon
TGGTTTGGAAGATGCAGTTT+TGG 0.368839 4_3:+44648160 Msa0642710:CDS
GACAAACTGTATCAGGTCTA+AGG 0.376673 4_3:+44649067 Msa0642710:CDS
ATCAAATCAAGGTGATTATA+CGG 0.378500 4_3:+44652254 Msa0642710:CDS
AATGCCATCATGTGTTCCTT+TGG 0.380648 4_3:-44653847 None:intergenic
TCAAGATCAGATTGTTGATC+AGG 0.387523 4_3:+44652891 Msa0642710:CDS
TCACCCCACATAACTATTTG+TGG 0.388228 4_3:+44654375 Msa0642710:three_prime_UTR
TACTAACATAAGAGATAATA+GGG 0.390133 4_3:+44651906 Msa0642710:CDS
TATAGGAGAGAGGCGTGGTT+TGG 0.390798 4_3:+44648145 Msa0642710:CDS
TTTAATACAAATGAACAAAC+TGG 0.391228 4_3:+44651853 Msa0642710:CDS
TACTACTTGGAGCAGTTTCA+TGG 0.394166 4_3:-44652566 None:intergenic
GCTGGTTGCTTGGCTGCAAC+CGG 0.397760 4_3:-44651794 None:intergenic
AGGCAAAGACAAACTGTATC+AGG 0.398204 4_3:+44649060 Msa0642710:CDS
AGCATCCTCATGGTGATAAC+TGG 0.404311 4_3:+44652983 Msa0642710:CDS
ATCCTGAACATGTGCACAAA+TGG 0.406979 4_3:-44653598 None:intergenic
AATCGCTCAGCTGGTTCATC+AGG 0.410026 4_3:+44653289 Msa0642710:CDS
ATGAGTTGCTTCAAAGTAGA+AGG 0.410878 4_3:+44653627 Msa0642710:CDS
GCAACCGGTACTGTCCATTC+TGG 0.416909 4_3:-44651779 None:intergenic
TCACGAGTTGCTGGACCATC+AGG 0.422823 4_3:+44648652 Msa0642710:CDS
AAACTTGAAATGGCGATTGC+TGG 0.423615 4_3:+44647876 Msa0642710:exon
TTTGAGGGATTCGCAGTCTC+AGG 0.424725 4_3:+44647932 Msa0642710:CDS
TTCAGAGCATAGTAATAATC+AGG 0.425192 4_3:+44652167 Msa0642710:CDS
CTACAGATGTGGACCTGTTA+TGG 0.426239 4_3:-44649014 None:intergenic
CAGATAGGTTGCTGGTTGCT+TGG 0.427588 4_3:-44651804 None:intergenic
GGAAAGGGTGAGAGTTATAA+GGG 0.430274 4_3:+44648403 Msa0642710:CDS
AGGGACAAAATGAGTATATA+CGG 0.433117 4_3:+44648549 Msa0642710:CDS
TGTTTGCAGGCATTGCTTAG+AGG 0.436393 4_3:+44648961 Msa0642710:intron
TGCAGGCATTGCTTAGAGGC+AGG 0.437562 4_3:+44648965 Msa0642710:intron
TTGTATACATTGTCATCATC+AGG 0.440785 4_3:-44652609 None:intergenic
CAACATATGATTGTATCAAC+TGG 0.442570 4_3:-44652795 None:intergenic
GCACCTGATAGCCCAGATAT+AGG 0.445845 4_3:+44648128 Msa0642710:CDS
TAGAAATAATAAATGAATGA+AGG 0.448567 4_3:-44646935 None:intergenic
GCGTAAATTACGCGGCAGAC+AGG 0.448710 4_3:+44648580 Msa0642710:CDS
TGCTAACATGGAGTGGGATC+CGG 0.449305 4_3:+44652831 Msa0642710:CDS
GAGAGAAATTCACGAGTTGC+TGG 0.450529 4_3:+44648643 Msa0642710:CDS
TACTTGAACGAAGGAATAAT+GGG 0.451175 4_3:+44648078 Msa0642710:CDS
GCGTCGAGAAGGAGAGGAGA+TGG 0.451522 4_3:+44647954 Msa0642710:CDS
CCCGAAGAAGTGAAATTCCT+AGG 0.457905 4_3:+44648354 Msa0642710:CDS
AGGAGAGGAGATGGGAGAAG+TGG 0.461189 4_3:+44647963 Msa0642710:CDS
GGGTGAGAGTTATAAGGGAA+TGG 0.463412 4_3:+44648408 Msa0642710:CDS
TCTACTTTGAAGCAACTCAT+TGG 0.464087 4_3:-44653624 None:intergenic
GATGTGTCGAGACTCATGTT+TGG 0.464184 4_3:+44654052 Msa0642710:three_prime_UTR
GAGGATGCTTGAGGCATGTA+TGG 0.465292 4_3:+44653213 Msa0642710:CDS
ATGTGTCGAGACTCATGTTT+GGG 0.466141 4_3:+44654053 Msa0642710:three_prime_UTR
TCTGTAGCAGAAAGTGAATT+AGG 0.468211 4_3:+44649030 Msa0642710:CDS
AGCAGAGAAGTGTTTCTTCT+GGG 0.468948 4_3:+44648447 Msa0642710:CDS
ACTAGATGACAATTCTAAAT+GGG 0.469701 4_3:+44653418 Msa0642710:CDS
CTGCTCAAGGTTAGCAGATG+GGG 0.472277 4_3:-44652863 None:intergenic
TGGAGAAAGCAGTTCTTGTA+TGG 0.473122 4_3:+44651873 Msa0642710:CDS
AACATAAGAGATAATAGGGC+TGG 0.474807 4_3:+44651910 Msa0642710:CDS
TTCCTTATAATGATGATTTG+CGG 0.476689 4_3:+44647661 Msa0642710:five_prime_UTR
TGTTCTTTGAATTATGATAG+AGG 0.479587 4_3:+44654216 Msa0642710:three_prime_UTR
GTTGAAGAGATCTGTTTGTT+TGG 0.481004 4_3:+44647842 Msa0642710:five_prime_UTR
GTTGATGATGTGAATGGATC+TGG 0.481816 4_3:+44652288 Msa0642710:CDS
ATATTGATTCTTTATTGTAC+AGG 0.482450 4_3:+44653483 Msa0642710:CDS
CTCTAACAAGTTATATCGCC+TGG 0.483640 4_3:+44653752 Msa0642710:three_prime_UTR
CAGAAGCTTCTTGCCGATGA+GGG 0.484301 4_3:-44652479 None:intergenic
GGTCATACTTAACAATATAC+AGG 0.485559 4_3:+44653728 Msa0642710:three_prime_UTR
GCTGCTCAAGGTTAGCAGAT+GGG 0.489140 4_3:-44652864 None:intergenic
ACATAATGAGCAATCTGAGC+TGG 0.491558 4_3:+44652203 Msa0642710:CDS
AAATGGGAATGTGTGAGAAA+AGG 0.491566 4_3:+44653434 Msa0642710:CDS
ACATAAGAGATAATAGGGCT+GGG 0.492697 4_3:+44651911 Msa0642710:CDS
AGTTTCCACAAATAGTTATG+TGG 0.493839 4_3:-44654380 None:intergenic
TATGCTTGATATGCTTAAGA+AGG 0.494043 4_3:+44648604 Msa0642710:CDS
ACACAGGGGCATGACACATT+GGG 0.495087 4_3:-44653655 None:intergenic
ATGTTCTATATAATTTGTGC+TGG 0.495146 4_3:+44654179 Msa0642710:three_prime_UTR
TGAGGTATCAGATAGGTTGC+TGG 0.495149 4_3:-44651812 None:intergenic
CAGAAGAAACACTTCTCTGC+TGG 0.495392 4_3:-44648445 None:intergenic
GAAGTTTGGCAAGAAGATAG+TGG 0.496390 4_3:+44652501 Msa0642710:CDS
GGTGAGAGTTATAAGGGAAT+GGG 0.498358 4_3:+44648409 Msa0642710:CDS
TGGTGCTCTAGAAGAACAGC+TGG 0.499590 4_3:+44652308 Msa0642710:CDS
AACCTGAATGCGATTGCGAT+GGG 0.500742 4_3:-44648690 None:intergenic
GTGTCATGCCCCTGTGTTGG+AGG 0.503473 4_3:+44653661 Msa0642710:CDS
GCAACTGATTCCCTTCTACA+TGG 0.505549 4_3:-44651999 None:intergenic
ATTATCATCCACACTTTCAT+CGG 0.507455 4_3:-44652394 None:intergenic
AATTTGTGCTGGTTTGTTTG+TGG 0.508002 4_3:+44654190 Msa0642710:three_prime_UTR
GGCATCAGAGTAACACTGAA+TGG 0.512613 4_3:+44652361 Msa0642710:CDS
AAAAGTACCTGGAGATGTCC+AGG 0.515529 4_3:-44653770 None:intergenic
ATTCCTAGGGGAGAGTGGCT+TGG 0.515877 4_3:+44648368 Msa0642710:CDS
GTGGCTTGGAGAAACCGAAC+AGG 0.516282 4_3:+44648382 Msa0642710:CDS
AATGCAGGATGAGGTATAGT+TGG 0.519103 4_3:+44647590 Msa0642710:intron
TTGCTCATTATGTACCTCAC+TGG 0.519396 4_3:-44652193 None:intergenic
TGATAGAGACCATAAGAGTC+AGG 0.520949 4_3:-44654131 None:intergenic
TGCAAATTGAGTCAGTAGAT+AGG 0.521323 4_3:+44652028 Msa0642710:CDS
GTACGTATAACCTCCAACAC+AGG 0.522112 4_3:-44653671 None:intergenic
GCAGCACTAAATCGCTCAGC+TGG 0.523696 4_3:+44653280 Msa0642710:CDS
AACACAGGGGCATGACACAT+TGG 0.524870 4_3:-44653656 None:intergenic
GCAAATGTGGCGGGATATTG+AGG 0.524908 4_3:+44648010 Msa0642710:CDS
GTTTCCACAAATAGTTATGT+GGG 0.525473 4_3:-44654379 None:intergenic
AGTGAAGTGAAAACTTGAAA+TGG 0.525607 4_3:+44647866 Msa0642710:exon
ATGAGTGGCCTGAAAACAGT+TGG 0.525968 4_3:+44652436 Msa0642710:CDS
GAAAACAATTCATCAAATCA+AGG 0.526616 4_3:+44652243 Msa0642710:CDS
AGAGGTGGAGTAGGAGGTGA+AGG 0.526630 4_3:-44652952 None:intergenic
GAGGCCGTGGAAAATTGGTT+AGG 0.527945 4_3:+44652531 Msa0642710:CDS
AGGCAAGCAATCCACTTCAA+TGG 0.528735 4_3:-44654111 None:intergenic
AATGTGTCATGCCCCTGTGT+TGG 0.528835 4_3:+44653658 Msa0642710:CDS
TTCACTTTCTGCTACAGATG+TGG 0.530455 4_3:-44649025 None:intergenic
GAACGAATTGTTGAAAATGA+AGG 0.531145 4_3:+44652330 Msa0642710:CDS
TTAAGAAGGCTGAGAGGGAA+AGG 0.531448 4_3:+44648618 Msa0642710:CDS
ATGTATACAATGTTGAACTC+AGG 0.531948 4_3:+44652622 Msa0642710:CDS
AGTAATGCAATTAACAAAAG+TGG 0.532051 4_3:+44647694 Msa0642710:five_prime_UTR
TAACTATGAACTCTACTACT+TGG 0.532761 4_3:-44652579 None:intergenic
CGTCGAGAAGGAGAGGAGAT+GGG 0.533680 4_3:+44647955 Msa0642710:CDS
CCGAAGAAGTGAAATTCCTA+GGG 0.535421 4_3:+44648355 Msa0642710:CDS
CTTTGGGATCAGCATCCTCA+TGG 0.541128 4_3:+44652973 Msa0642710:CDS
TACTCCAAAGGAACACATGA+TGG 0.543313 4_3:+44653843 Msa0642710:three_prime_UTR
TGCTGCTCAAGGTTAGCAGA+TGG 0.543911 4_3:-44652865 None:intergenic
TGGAGAAACCGAACAGGAAA+GGG 0.545519 4_3:+44648388 Msa0642710:CDS
TAGTGGCTTCCAAGAGGCCG+TGG 0.546285 4_3:+44652518 Msa0642710:CDS
GGAAGGATTCTTCTCCAGAA+TGG 0.547490 4_3:+44651765 Msa0642710:CDS
CACGCCTCTCTCCTATATCT+GGG 0.548483 4_3:-44648139 None:intergenic
AAATTGGTTTGCCATTGAAG+TGG 0.548642 4_3:+44654100 Msa0642710:three_prime_UTR
GCAATTAACAAAAGTGGTGG+AGG 0.548673 4_3:+44647700 Msa0642710:five_prime_UTR
CGCAGTCTCAGGCGTCGAGA+AGG 0.549587 4_3:+44647943 Msa0642710:CDS
GTGAAATTCCTAGGGGAGAG+TGG 0.552088 4_3:+44648363 Msa0642710:CDS
ATCAATATCAATGTTTGATG+AGG 0.552491 4_3:-44651830 None:intergenic
TTCTCCAGAATGGACAGTAC+CGG 0.554594 4_3:+44651775 Msa0642710:CDS
TCTGGTGACCACTGTCTACA+AGG 0.555022 4_3:+44651937 Msa0642710:CDS
AAGTTACATGACAAATTAGC+TGG 0.555530 4_3:-44654154 None:intergenic
GGCAGTCATCATTCAGTGAT+GGG 0.556282 4_3:+44652049 Msa0642710:CDS
AAACCTGAATGCGATTGCGA+TGG 0.557623 4_3:-44648691 None:intergenic
TTATAATGATGATTTGCGGC+GGG 0.559688 4_3:+44647665 Msa0642710:five_prime_UTR
ATGGGAGAAGTGGAAGCAAT+CGG 0.560497 4_3:+44647973 Msa0642710:CDS
AGGCAGTCATCATTCAGTGA+TGG 0.562606 4_3:+44652048 Msa0642710:CDS
TTGGAGAAACCGAACAGGAA+AGG 0.563762 4_3:+44648387 Msa0642710:CDS
AGTCATGTTCAAGGAAGAGC+GGG 0.564851 4_3:+44648047 Msa0642710:CDS
CATAATGAGCAATCTGAGCT+GGG 0.565927 4_3:+44652204 Msa0642710:CDS
TCAGAAGCTTCTTGCCGATG+AGG 0.566572 4_3:-44652480 None:intergenic
GTAGGAGGTGAAGGCAAAGA+GGG 0.566610 4_3:-44652943 None:intergenic
CATGCGGTGAGTCATGTTCA+AGG 0.567237 4_3:+44648038 Msa0642710:CDS
CCACAATTACATAATGAGAC+AGG 0.567328 4_3:-44654020 None:intergenic
TGTTTGATGAGGTATCAGAT+AGG 0.568109 4_3:-44651819 None:intergenic
TACGTATAACCTCCAACACA+GGG 0.568125 4_3:-44653670 None:intergenic
TCTCAGGCGTCGAGAAGGAG+AGG 0.568369 4_3:+44647948 Msa0642710:CDS
GAGAGGGAACGGAGAAAGAG+CGG 0.568383 4_3:-44646962 None:intergenic
CCTGTCTCATTATGTAATTG+TGG 0.569426 4_3:+44654020 Msa0642710:three_prime_UTR
TCTCCAAGCCACTCTCCCCT+AGG 0.570313 4_3:-44648371 None:intergenic
AATGTTGTTGATGATGTGAA+TGG 0.570524 4_3:+44652282 Msa0642710:CDS
GATCTTGACTCTGCTGCTCA+AGG 0.570783 4_3:-44652876 None:intergenic
AAGACAAGGTCATGCTAACA+TGG 0.573015 4_3:+44652819 Msa0642710:CDS
TGAGTGGCCTGAAAACAGTT+GGG 0.573179 4_3:+44652437 Msa0642710:CDS
GTGAGAGTGAGTCGGATACA+TGG 0.573797 4_3:+44648183 Msa0642710:CDS
TCCCAAAGAGGTGGAGTAGG+AGG 0.575347 4_3:-44652958 None:intergenic
TATATCGCCTGGACATCTCC+AGG 0.577279 4_3:+44653763 Msa0642710:three_prime_UTR
AAAGTGAATTAGGCTTATTG+AGG 0.577540 4_3:+44649040 Msa0642710:CDS
TGTTTCTTCTGGGGAAAACA+GGG 0.577546 4_3:+44648457 Msa0642710:CDS
TGTATACAATGTTGAACTCA+GGG 0.579146 4_3:+44652623 Msa0642710:CDS
AATCTACTGCCCATGTAGAA+GGG 0.580314 4_3:+44651989 Msa0642710:CDS
AACTCAGGGAACTTCATAGT+AGG 0.580482 4_3:+44652637 Msa0642710:CDS
GCCGTGGAAAATTGGTTAGG+AGG 0.582438 4_3:+44652534 Msa0642710:CDS
GGAGCAGTTTCATGGTCAGA+AGG 0.584695 4_3:-44652558 None:intergenic
AAACGTAACCCTAGAAGTGA+AGG 0.585286 4_3:-44647057 None:intergenic
GGCAAAGAGGGCAAGTCAAG+TGG 0.585826 4_3:-44652931 None:intergenic
CAAATTGAACGTGTGCGTGA+TGG 0.589798 4_3:+44648506 Msa0642710:CDS
AATGCAATTAACAAAAGTGG+TGG 0.592332 4_3:+44647697 Msa0642710:five_prime_UTR
TTGAAAATGAAGGAAGTGGC+TGG 0.593253 4_3:+44652340 Msa0642710:CDS
AGATCAGATTGTTGATCAGG+AGG 0.593384 4_3:+44652894 Msa0642710:CDS
TGATCCCAAAGAGGTGGAGT+AGG 0.595989 4_3:-44652961 None:intergenic
CATAAGAGATAATAGGGCTG+GGG 0.598060 4_3:+44651912 Msa0642710:CDS
TATGCTTAAGAAGGCTGAGA+GGG 0.600029 4_3:+44648613 Msa0642710:CDS
TAATGACTTGAGACTTGACA+TGG 0.602099 4_3:+44653159 Msa0642710:CDS
AAGGTCATGCTAACATGGAG+TGG 0.602708 4_3:+44652824 Msa0642710:CDS
AGACGTGTGTCTAATCTCCT+CGG 0.602774 4_3:+44652748 Msa0642710:CDS
GATCAGATTGTTGATCAGGA+GGG 0.602786 4_3:+44652895 Msa0642710:CDS
CAACTGATTCCCTTCTACAT+GGG 0.607164 4_3:-44651998 None:intergenic
CAAATACAAACTCTTCACTC+TGG 0.607274 4_3:+44647089 Msa0642710:five_prime_UTR
CAATCATATGTTGAAAGACA+AGG 0.607748 4_3:+44652805 Msa0642710:CDS
AGGTCATGCTAACATGGAGT+GGG 0.609154 4_3:+44652825 Msa0642710:CDS
AGTAGGAGGTGAAGGCAAAG+AGG 0.610022 4_3:-44652944 None:intergenic
ATTGTTGAAAATGAAGGAAG+TGG 0.611160 4_3:+44652336 Msa0642710:CDS
AATTACATAATGAGACAGGT+TGG 0.613079 4_3:-44654016 None:intergenic
GCAGAGAAGTGTTTCTTCTG+GGG 0.614516 4_3:+44648448 Msa0642710:CDS
AAGGAATAATGGGTTGATTG+CGG 0.619484 4_3:+44648088 Msa0642710:CDS
ACATGGCTAGATTACAGCAA+AGG 0.619715 4_3:+44653176 Msa0642710:CDS
TGAATCTCATGATGGTCATG+AGG 0.623629 4_3:+44648226 Msa0642710:CDS
GAGCTGGGTGATATAAGTAA+TGG 0.624327 4_3:+44652219 Msa0642710:CDS
AAATAGCACCGATGAAAGTG+TGG 0.625113 4_3:+44652386 Msa0642710:CDS
AGTCAGAATGAATCTCATGA+TGG 0.625222 4_3:+44648218 Msa0642710:CDS
TGAAAACAGTTGGGTCAATG+AGG 0.628260 4_3:+44652446 Msa0642710:CDS
GTGAAGTAGTACTTGAACGA+AGG 0.628468 4_3:+44648069 Msa0642710:CDS
AGGATGTAGAAAACCCTCAT+CGG 0.631792 4_3:+44652466 Msa0642710:CDS
TGTGTACCAATTTCAGCACG+TGG 0.632437 4_3:-44648485 None:intergenic
GGATGCTGATCCCAAAGAGG+TGG 0.632575 4_3:-44652967 None:intergenic
TGTGAAAGAAGAGATTGCAC+TGG 0.632608 4_3:+44652072 Msa0642710:CDS
GTGAAAGAAGAGATTGCACT+GGG 0.636464 4_3:+44652073 Msa0642710:CDS
ATTCATGTCAAGTACTCCAA+AGG 0.637258 4_3:+44653831 Msa0642710:three_prime_UTR
ACCTGAATGCGATTGCGATG+GGG 0.639757 4_3:-44648689 None:intergenic
TAACACATAGTTACTAGAGG+CGG 0.641206 4_3:-44653027 None:intergenic
CACTGGGCAAAATGTTGATG+TGG 0.643337 4_3:+44652089 Msa0642710:CDS
ATATGCTTAAGAAGGCTGAG+AGG 0.643545 4_3:+44648612 Msa0642710:CDS
CTTATAATGATGATTTGCGG+CGG 0.643988 4_3:+44647664 Msa0642710:five_prime_UTR
TTTGTCGTTAACCACAGTGA+GGG 0.653914 4_3:+44648530 Msa0642710:CDS
TCAGAAATACAGCAAATGAG+TGG 0.656504 4_3:+44652421 Msa0642710:CDS
GAGTCATGTTCAAGGAAGAG+CGG 0.660261 4_3:+44648046 Msa0642710:CDS
AAAGGATGAATACTATGCAG+AGG 0.664403 4_3:+44653194 Msa0642710:CDS
TTTCCACAAATAGTTATGTG+GGG 0.667190 4_3:-44654378 None:intergenic
TACTATGCAGAGGATGCTTG+AGG 0.669401 4_3:+44653204 Msa0642710:CDS
GGATATTGAGGATGAACATG+CGG 0.669856 4_3:+44648022 Msa0642710:CDS
TCGCACGGAAACTACTTCCG+AGG 0.672959 4_3:-44652765 None:intergenic
AGAAGATAGTGGCTTCCAAG+AGG 0.678702 4_3:+44652512 Msa0642710:CDS
TCAACTGGTCAAGACTCGCA+CGG 0.680463 4_3:-44652780 None:intergenic
TGAGGATGCTGATCCCAAAG+AGG 0.681681 4_3:-44652970 None:intergenic
ATAGCCCAGATATAGGAGAG+AGG 0.687767 4_3:+44648135 Msa0642710:CDS
GAAAACGTGATACAGCCTGA+TGG 0.688400 4_3:-44648667 None:intergenic
ATGTAATTCCTTGTAGACAG+TGG 0.688457 4_3:-44651945 None:intergenic
AAGTTGAAAGGGAAAGAGTG+CGG 0.701088 4_3:+44648291 Msa0642710:CDS
GACAAAATGAGTATATACGG+AGG 0.701738 4_3:+44648552 Msa0642710:CDS
TAATAATCAGGTATCCAGTG+AGG 0.702522 4_3:+44652179 Msa0642710:CDS
TGCGACCAGTTATCACCATG+AGG 0.712073 4_3:-44652988 None:intergenic
ATTTGTCGTTAACCACAGTG+AGG 0.724751 4_3:+44648529 Msa0642710:CDS
CCAGATATAGGAGAGAGGCG+TGG 0.726312 4_3:+44648140 Msa0642710:CDS
AGGAGTATGCGTAAATTACG+CGG 0.727888 4_3:+44648572 Msa0642710:CDS
CGAAGAAGTGAAATTCCTAG+GGG 0.738636 4_3:+44648356 Msa0642710:CDS
ACGTATAACCTCCAACACAG+GGG 0.774720 4_3:-44653669 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAAACTATATTTTAC+TGG - chr4_3:44648885-44648904 None:intergenic 10.0%
!!! GTTTATTTTAGAAAAAAATT+AGG - chr4_3:44649785-44649804 None:intergenic 10.0%
!!! ATCTTTAATTTTAAAATGAT+AGG - chr4_3:44652692-44652711 None:intergenic 10.0%
!!! TATCATTTTAAAATTAAAGA+TGG + chr4_3:44652691-44652710 Msa0642710:intron 10.0%
!!! TTTTAAAAAAATAATTTGCT+TGG + chr4_3:44654294-44654313 Msa0642710:three_prime_UTR 10.0%
!!! ATTATTCAAATTCATTTTCA+TGG + chr4_3:44647365-44647384 Msa0642710:intron 15.0%
!!! GTAATAATAATTTGTTAATG+TGG + chr4_3:44647533-44647552 Msa0642710:intron 15.0%
!! AAAAGTTTCATAAACAATAA+GGG - chr4_3:44649185-44649204 None:intergenic 15.0%
!! AAAAAGTTTCATAAACAATA+AGG - chr4_3:44649186-44649205 None:intergenic 15.0%
!!! TTTTTTTTTAAACTTGTTGA+GGG + chr4_3:44650391-44650410 Msa0642710:intron 15.0%
!!! TAATATTGACTTTACAATAA+AGG + chr4_3:44653707-44653726 Msa0642710:exon 15.0%
!!! ATTATTTATTTTTGGAATGC+AGG + chr4_3:44647575-44647594 Msa0642710:intron 20.0%
!! AATAGAAACTAATCACTTAT+TGG - chr4_3:44648719-44648738 None:intergenic 20.0%
!! AAAGTTTCATAAACAATAAG+GGG - chr4_3:44649184-44649203 None:intergenic 20.0%
!! ATCAAACAAAAGAATCTATT+CGG - chr4_3:44649377-44649396 None:intergenic 20.0%
!!! GTTTTTTTTTAAACTTGTTG+AGG + chr4_3:44650390-44650409 Msa0642710:intron 20.0%
!!! TTAAAAGTTAGGCTTTAAAA+TGG + chr4_3:44651278-44651297 Msa0642710:intron 20.0%
!!! TAAAAGTTAGGCTTTAAAAT+GGG + chr4_3:44651279-44651298 Msa0642710:intron 20.0%
!! TTTAATACAAATGAACAAAC+TGG + chr4_3:44651853-44651872 Msa0642710:CDS 20.0%
!! TACTAACATAAGAGATAATA+GGG + chr4_3:44651906-44651925 Msa0642710:CDS 20.0%
!!! AACTATGTGTTATTTTTCTT+TGG + chr4_3:44653038-44653057 Msa0642710:intron 20.0%
!!! TGTGAAAAGTGATTTTTATT+TGG + chr4_3:44653089-44653108 Msa0642710:intron 20.0%
!!! ATATTGATTCTTTATTGTAC+AGG + chr4_3:44653483-44653502 Msa0642710:CDS 20.0%
!!! TTTTATTCATATCAGAACTA+TGG - chr4_3:44653881-44653900 None:intergenic 20.0%
!!! AAAAAAATAATTTGCTTGGT+TGG + chr4_3:44654298-44654317 Msa0642710:three_prime_UTR 20.0%
!! AATGAAAAACTTAGTGTAAA+AGG - chr4_3:44654351-44654370 None:intergenic 20.0%
! ACGAAAATGAGAGAAAAAAT+TGG - chr4_3:44647007-44647026 None:intergenic 25.0%
! ATGAAGAATGAAGAATGAAA+AGG - chr4_3:44647121-44647140 None:intergenic 25.0%
!! AGTAGTGTTGAATCTTTAAA+AGG + chr4_3:44647614-44647633 Msa0642710:five_prime_UTR 25.0%
! TTCCTTATAATGATGATTTG+CGG + chr4_3:44647661-44647680 Msa0642710:five_prime_UTR 25.0%
! AGTAATGCAATTAACAAAAG+TGG + chr4_3:44647694-44647713 Msa0642710:five_prime_UTR 25.0%
!!! TGCAGATTTTAATCCATATA+TGG + chr4_3:44647819-44647838 Msa0642710:intron 25.0%
!!! GCAGATTTTAATCCATATAT+GGG + chr4_3:44647820-44647839 Msa0642710:intron 25.0%
!! TTTTATACTGAATGTCAAGA+TGG + chr4_3:44648817-44648836 Msa0642710:intron 25.0%
!! TAAACTATATTTTACTGGAG+TGG - chr4_3:44648880-44648899 None:intergenic 25.0%
! ATCAAATTGAGTACAAAACT+CGG - chr4_3:44648926-44648945 None:intergenic 25.0%
!!! ATTTTTTAACTGAACTCCTA+TGG + chr4_3:44649413-44649432 Msa0642710:intron 25.0%
!!! CTCTTTTTGTTTCATAAAAC+AGG - chr4_3:44649862-44649881 None:intergenic 25.0%
! ATAAATAAAACAACATGGCT+TGG - chr4_3:44650044-44650063 None:intergenic 25.0%
! TCACGATAAATAAAACAACA+TGG - chr4_3:44650049-44650068 None:intergenic 25.0%
! ATGATCGTGTATAAAAAATG+AGG - chr4_3:44650074-44650093 None:intergenic 25.0%
! GAACATTCTAAGTAGAATAT+AGG + chr4_3:44650144-44650163 Msa0642710:intron 25.0%
!!! CTTTTAGAACTTGATTTTGA+TGG + chr4_3:44650801-44650820 Msa0642710:intron 25.0%
!! TATACCGCTATAACATTTTT+GGG + chr4_3:44650909-44650928 Msa0642710:intron 25.0%
!!! AGTTTTGTACGATAGAAATA+AGG + chr4_3:44650989-44651008 Msa0642710:intron 25.0%
! TCTCTTTACTTTCATGATAT+TGG - chr4_3:44651048-44651067 None:intergenic 25.0%
!!! AACTTTTTTGGAAAATAGGT+TGG - chr4_3:44651208-44651227 None:intergenic 25.0%
!!! ACTGAACTTTTTTGGAAAAT+AGG - chr4_3:44651212-44651231 None:intergenic 25.0%
! ATCCAGCTGAAAAATAAAAA+AGG + chr4_3:44651416-44651435 Msa0642710:intron 25.0%
!!! TTCCTTTTTTATTTTTCAGC+TGG - chr4_3:44651421-44651440 None:intergenic 25.0%
! CACAAAACAAGTATACAAAA+TGG - chr4_3:44651716-44651735 None:intergenic 25.0%
! ATCAATATCAATGTTTGATG+AGG - chr4_3:44651833-44651852 None:intergenic 25.0%
! CTATTATCTCTTATGTTAGT+AGG - chr4_3:44651907-44651926 None:intergenic 25.0%
! CTACTAACATAAGAGATAAT+AGG + chr4_3:44651905-44651924 Msa0642710:CDS 25.0%
! GAAAACAATTCATCAAATCA+AGG + chr4_3:44652243-44652262 Msa0642710:CDS 25.0%
! ATCAAATCAAGGTGATTATA+CGG + chr4_3:44652254-44652273 Msa0642710:CDS 25.0%
! ATAAACAGAACCATTTATTC+TGG - chr4_3:44652720-44652739 None:intergenic 25.0%
! AAATAACACATAGTTACTAG+AGG - chr4_3:44653033-44653052 None:intergenic 25.0%
!!! TATGTGTTATTTTTCTTTGG+TGG + chr4_3:44653041-44653060 Msa0642710:intron 25.0%
! TCTCTTGAAAAGATAAAATG+CGG - chr4_3:44653343-44653362 None:intergenic 25.0%
! ACTAGATGACAATTCTAAAT+GGG + chr4_3:44653418-44653437 Msa0642710:CDS 25.0%
!!! AACAAAAAGAAAAAAGTACC+TGG - chr4_3:44653784-44653803 None:intergenic 25.0%
!!! ATCCTGTCCTTTTTTATTTT+AGG + chr4_3:44653959-44653978 Msa0642710:three_prime_UTR 25.0%
! TGCATATCTCAAAATCAAAT+TGG + chr4_3:44654084-44654103 Msa0642710:three_prime_UTR 25.0%
!! ATGTTCTATATAATTTGTGC+TGG + chr4_3:44654179-44654198 Msa0642710:three_prime_UTR 25.0%
! TGTTCTTTGAATTATGATAG+AGG + chr4_3:44654216-44654235 Msa0642710:three_prime_UTR 25.0%
!!! TTGTGGAAACTATTTTTCTT+TGG + chr4_3:44654392-44654411 Msa0642710:three_prime_UTR 25.0%
TGAATCCAGAGAATTCAAAT+TGG - chr4_3:44647257-44647276 None:intergenic 30.0%
!!! GTTGTTTTTTCTGAGTGAAA+TGG + chr4_3:44647333-44647352 Msa0642710:intron 30.0%
TTTAGAAAATCACAGCCATT+CGG - chr4_3:44647421-44647440 None:intergenic 30.0%
!!! GATTTTCTAAAACTGGATTG+TGG + chr4_3:44647430-44647449 Msa0642710:intron 30.0%
AATGCAATTAACAAAAGTGG+TGG + chr4_3:44647697-44647716 Msa0642710:five_prime_UTR 30.0%
AGTGAAGTGAAAACTTGAAA+TGG + chr4_3:44647866-44647885 Msa0642710:exon 30.0%
TACTTGAACGAAGGAATAAT+GGG + chr4_3:44648078-44648097 Msa0642710:CDS 30.0%
! TGTGAAAACTCTTCTGTTTT+CGG + chr4_3:44648266-44648285 Msa0642710:CDS 30.0%
AGGGACAAAATGAGTATATA+CGG + chr4_3:44648549-44648568 Msa0642710:CDS 30.0%
TATGCTTGATATGCTTAAGA+AGG + chr4_3:44648604-44648623 Msa0642710:CDS 30.0%
TCAAATTGAGTACAAAACTC+GGG - chr4_3:44648925-44648944 None:intergenic 30.0%
AAAGTGAATTAGGCTTATTG+AGG + chr4_3:44649040-44649059 Msa0642710:CDS 30.0%
TTTCATAAACAATAAGGGGA+CGG - chr4_3:44649180-44649199 None:intergenic 30.0%
AATCTATTCGGTTAAGTTAG+GGG - chr4_3:44649365-44649384 None:intergenic 30.0%
GAATCTATTCGGTTAAGTTA+GGG - chr4_3:44649366-44649385 None:intergenic 30.0%
AGAATCTATTCGGTTAAGTT+AGG - chr4_3:44649367-44649386 None:intergenic 30.0%
! ATATTTGTTTGCTGACATAG+TGG + chr4_3:44649520-44649539 Msa0642710:intron 30.0%
TGAGTTCATACTTAGCAAAT+TGG + chr4_3:44649573-44649592 Msa0642710:intron 30.0%
GAGTTCATACTTAGCAAATT+GGG + chr4_3:44649574-44649593 Msa0642710:intron 30.0%
! TTTTAACATATACTGCATGC+TGG - chr4_3:44649707-44649726 None:intergenic 30.0%
TGGCTACAATTGTTTGATTA+GGG - chr4_3:44649917-44649936 None:intergenic 30.0%
TTGGCTACAATTGTTTGATT+AGG - chr4_3:44649918-44649937 None:intergenic 30.0%
! GATTTTCCTATTTCCTCTTT+TGG - chr4_3:44649937-44649956 None:intergenic 30.0%
GACGAATGTGGATAAAAATT+GGG - chr4_3:44650018-44650037 None:intergenic 30.0%
! ATGACTGCTATTGCAATTTT+GGG + chr4_3:44650337-44650356 Msa0642710:intron 30.0%
! TAAACACGGGTTACAATATT+AGG - chr4_3:44650447-44650466 None:intergenic 30.0%
! TTGCTTATGTCTTTTTCTGA+CGG + chr4_3:44650757-44650776 Msa0642710:intron 30.0%
GACTAAAATCCATGTACAAA+GGG - chr4_3:44650860-44650879 None:intergenic 30.0%
AGACTAAAATCCATGTACAA+AGG - chr4_3:44650861-44650880 None:intergenic 30.0%
!! GATTTTAGTCTTCACAATAG+AGG + chr4_3:44650870-44650889 Msa0642710:intron 30.0%
AAAATGTTATAGCGGTATAG+CGG - chr4_3:44650908-44650927 None:intergenic 30.0%
! CTATACCGCTATAACATTTT+TGG + chr4_3:44650908-44650927 Msa0642710:intron 30.0%
! ATACCGCTATAACATTTTTG+GGG + chr4_3:44650910-44650929 Msa0642710:intron 30.0%
!!! GTTCAGTAACTGAACTTTTT+TGG - chr4_3:44651220-44651239 None:intergenic 30.0%
! TAACTTTTAACATCAGTTCC+TGG - chr4_3:44651268-44651287 None:intergenic 30.0%
AGGAACTGATGTTAAAAGTT+AGG + chr4_3:44651267-44651286 Msa0642710:intron 30.0%
!! TTGTTTTATGCTGTTTGACT+TGG + chr4_3:44651456-44651475 Msa0642710:intron 30.0%
!! TGTTTTATGCTGTTTGACTT+GGG + chr4_3:44651457-44651476 Msa0642710:intron 30.0%
AACAAGTATACAAAATGGAG+TGG - chr4_3:44651711-44651730 None:intergenic 30.0%
AAACAAAGAGCTAATGTCAT+TGG - chr4_3:44651739-44651758 None:intergenic 30.0%
! ATTAGCTCTTTGTTTGAACA+GGG + chr4_3:44651744-44651763 Msa0642710:intron 30.0%
TTCAGAGCATAGTAATAATC+AGG + chr4_3:44652167-44652186 Msa0642710:CDS 30.0%
!! AATGTTGTTGATGATGTGAA+TGG + chr4_3:44652282-44652301 Msa0642710:CDS 30.0%
GAACGAATTGTTGAAAATGA+AGG + chr4_3:44652330-44652349 Msa0642710:CDS 30.0%
ATTGTTGAAAATGAAGGAAG+TGG + chr4_3:44652336-44652355 Msa0642710:CDS 30.0%
ATTATCATCCACACTTTCAT+CGG - chr4_3:44652397-44652416 None:intergenic 30.0%
TAACTATGAACTCTACTACT+TGG - chr4_3:44652582-44652601 None:intergenic 30.0%
TTGTATACATTGTCATCATC+AGG - chr4_3:44652612-44652631 None:intergenic 30.0%
ATGTATACAATGTTGAACTC+AGG + chr4_3:44652622-44652641 Msa0642710:CDS 30.0%
TGTATACAATGTTGAACTCA+GGG + chr4_3:44652623-44652642 Msa0642710:CDS 30.0%
AAGATGGTATCCAGAATAAA+TGG + chr4_3:44652707-44652726 Msa0642710:intron 30.0%
CAACATATGATTGTATCAAC+TGG - chr4_3:44652798-44652817 None:intergenic 30.0%
CAATCATATGTTGAAAGACA+AGG + chr4_3:44652805-44652824 Msa0642710:CDS 30.0%
TTCCTGGGATAAATTTAACT+CGG - chr4_3:44653382-44653401 None:intergenic 30.0%
CACTAGATGACAATTCTAAA+TGG + chr4_3:44653417-44653436 Msa0642710:CDS 30.0%
AGTCGGTGATTATAATAATC+CGG - chr4_3:44653551-44653570 None:intergenic 30.0%
GGTCATACTTAACAATATAC+AGG + chr4_3:44653728-44653747 Msa0642710:three_prime_UTR 30.0%
!!! AACACATGATGGCATTTTTT+TGG + chr4_3:44653854-44653873 Msa0642710:three_prime_UTR 30.0%
!!! ACACATGATGGCATTTTTTT+GGG + chr4_3:44653855-44653874 Msa0642710:three_prime_UTR 30.0%
CACCTAAAATAAAAAAGGAC+AGG - chr4_3:44653964-44653983 None:intergenic 30.0%
!!! CTGTCCTTTTTTATTTTAGG+TGG + chr4_3:44653962-44653981 Msa0642710:three_prime_UTR 30.0%
AATTACATAATGAGACAGGT+TGG - chr4_3:44654019-44654038 None:intergenic 30.0%
AAGTTACATGACAAATTAGC+TGG - chr4_3:44654157-44654176 None:intergenic 30.0%
TTTCCACAAATAGTTATGTG+GGG - chr4_3:44654381-44654400 None:intergenic 30.0%
GTTTCCACAAATAGTTATGT+GGG - chr4_3:44654382-44654401 None:intergenic 30.0%
AGTTTCCACAAATAGTTATG+TGG - chr4_3:44654383-44654402 None:intergenic 30.0%
!! AACTATTTTTCTTTGGCTGT+TGG + chr4_3:44654399-44654418 Msa0642710:three_prime_UTR 30.0%
CAAATACAAACTCTTCACTC+TGG + chr4_3:44647089-44647108 Msa0642710:five_prime_UTR 35.0%
CAATGCCAATTTGAATTCTC+TGG + chr4_3:44647249-44647268 Msa0642710:intron 35.0%
!!! TGGCTGTGATTTTCTAAAAC+TGG + chr4_3:44647423-44647442 Msa0642710:intron 35.0%
! TGGAATCTGAGGTTGAAAAT+TGG + chr4_3:44647450-44647469 Msa0642710:intron 35.0%
! TCTGAGGTTGAAAATTGGAA+TGG + chr4_3:44647455-44647474 Msa0642710:intron 35.0%
!!! TATTTTTGGAATGCAGGATG+AGG + chr4_3:44647581-44647600 Msa0642710:intron 35.0%
! CTTATAATGATGATTTGCGG+CGG + chr4_3:44647664-44647683 Msa0642710:five_prime_UTR 35.0%
! TTATAATGATGATTTGCGGC+GGG + chr4_3:44647665-44647684 Msa0642710:five_prime_UTR 35.0%
AGATCTCTTCAACCCATATA+TGG - chr4_3:44647835-44647854 None:intergenic 35.0%
GTTGAAGAGATCTGTTTGTT+TGG + chr4_3:44647842-44647861 Msa0642710:five_prime_UTR 35.0%
GTACTTGAACGAAGGAATAA+TGG + chr4_3:44648077-44648096 Msa0642710:CDS 35.0%
!! AAGGAATAATGGGTTGATTG+CGG + chr4_3:44648088-44648107 Msa0642710:CDS 35.0%
AGTCAGAATGAATCTCATGA+TGG + chr4_3:44648218-44648237 Msa0642710:CDS 35.0%
! TGTTTTCGGAGAAGTTGAAA+GGG + chr4_3:44648280-44648299 Msa0642710:CDS 35.0%
GACAAAATGAGTATATACGG+AGG + chr4_3:44648552-44648571 Msa0642710:CDS 35.0%
AATGTCAAGATGGAAAACCT+AGG + chr4_3:44648827-44648846 Msa0642710:intron 35.0%
ACATCCATCAAAATGTTTGC+AGG + chr4_3:44648948-44648967 Msa0642710:intron 35.0%
! AATGCCTGCAAACATTTTGA+TGG - chr4_3:44648955-44648974 None:intergenic 35.0%
TCTGTAGCAGAAAGTGAATT+AGG + chr4_3:44649030-44649049 Msa0642710:CDS 35.0%
TTCATAAACAATAAGGGGAC+GGG - chr4_3:44649179-44649198 None:intergenic 35.0%
! AGCTTGGTCGGAATATTTTA+GGG + chr4_3:44649446-44649465 Msa0642710:intron 35.0%
! TCCACATTTTTGCCAAGAAA+TGG + chr4_3:44649612-44649631 Msa0642710:intron 35.0%
! CCACATTTTTGCCAAGAAAT+GGG + chr4_3:44649613-44649632 Msa0642710:intron 35.0%
TGCCAAGAAATGGGAAAAAA+AGG + chr4_3:44649622-44649641 Msa0642710:intron 35.0%
!!! AGCCTTTTTTTCCCATTTCT+TGG - chr4_3:44649627-44649646 None:intergenic 35.0%
TGGGAAAAAAAGGCTTCAAA+AGG + chr4_3:44649632-44649651 Msa0642710:intron 35.0%
!!! TTTTGCAACGTATTGGTTCA+GGG - chr4_3:44649665-44649684 None:intergenic 35.0%
!!! TTTTTGCAACGTATTGGTTC+AGG - chr4_3:44649666-44649685 None:intergenic 35.0%
GAACCAATACGTTGCAAAAA+CGG + chr4_3:44649666-44649685 Msa0642710:intron 35.0%
! TTCAGTTTTGCATATGCCTT+GGG - chr4_3:44649834-44649853 None:intergenic 35.0%
CAAACAATTGTAGCCAAAAG+AGG + chr4_3:44649921-44649940 Msa0642710:intron 35.0%
TTGTAGCCAAAAGAGGAAAT+AGG + chr4_3:44649928-44649947 Msa0642710:intron 35.0%
CGACGAATGTGGATAAAAAT+TGG - chr4_3:44650019-44650038 None:intergenic 35.0%
AACACTTACCTTTCTGAGTT+TGG - chr4_3:44650101-44650120 None:intergenic 35.0%
TAGTGTGATATAGTGTAGTG+TGG + chr4_3:44650185-44650204 Msa0642710:intron 35.0%
! GATGACTGCTATTGCAATTT+TGG + chr4_3:44650336-44650355 Msa0642710:intron 35.0%
! TGACTGCTATTGCAATTTTG+GGG + chr4_3:44650338-44650357 Msa0642710:intron 35.0%
!! TAAACTTGTTGAGGGTATAG+TGG + chr4_3:44650399-44650418 Msa0642710:intron 35.0%
TTGTAACCCGTGTTTAATTG+TGG + chr4_3:44650451-44650470 Msa0642710:intron 35.0%
AAAGCAGCCACAATTAAACA+CGG - chr4_3:44650461-44650480 None:intergenic 35.0%
ATGAGAGCAAGGCAATATAA+CGG - chr4_3:44650507-44650526 None:intergenic 35.0%
TCAAACAGAAACAGAATGGA+AGG - chr4_3:44650604-44650623 None:intergenic 35.0%
GAACTCAAACAGAAACAGAA+TGG - chr4_3:44650608-44650627 None:intergenic 35.0%
! CTGTTTGAGTTCTTCTTTCT+TGG + chr4_3:44650616-44650635 Msa0642710:intron 35.0%
ACGAACAGAAACAGAAAAGA+AGG - chr4_3:44650659-44650678 None:intergenic 35.0%
!!! TGTTCGTGTTTTGTTTTCTG+AGG + chr4_3:44650672-44650691 Msa0642710:intron 35.0%
!! GGAAGCATGATTTTGATCAA+TGG + chr4_3:44650708-44650727 Msa0642710:intron 35.0%
! TGCTTATGTCTTTTTCTGAC+GGG + chr4_3:44650758-44650777 Msa0642710:intron 35.0%
ACTTGATTTCCCTTTGTACA+TGG + chr4_3:44650848-44650867 Msa0642710:intron 35.0%
GAACCCCAAAAATGTTATAG+CGG - chr4_3:44650916-44650935 None:intergenic 35.0%
!!! GCTATAACATTTTTGGGGTT+CGG + chr4_3:44650915-44650934 Msa0642710:intron 35.0%
! TATCTGAGATTGACCACATA+GGG + chr4_3:44650951-44650970 Msa0642710:intron 35.0%
TTCATAGTAAGATCCCTATG+TGG - chr4_3:44650967-44650986 None:intergenic 35.0%
AAGTAAAGAGATGCAACAGT+TGG + chr4_3:44651057-44651076 Msa0642710:intron 35.0%
ACAGTTGGAATTAGGAGATA+TGG + chr4_3:44651072-44651091 Msa0642710:intron 35.0%
CAGTTGGAATTAGGAGATAT+GGG + chr4_3:44651073-44651092 Msa0642710:intron 35.0%
AGTTGGAATTAGGAGATATG+GGG + chr4_3:44651074-44651093 Msa0642710:intron 35.0%
GTGTCCAAATTGAAGAATGT+CGG + chr4_3:44651163-44651182 Msa0642710:intron 35.0%
TGAACCGACATTCTTCAATT+TGG - chr4_3:44651170-44651189 None:intergenic 35.0%
TAAAAATGTGTGTTCAGTCC+AGG + chr4_3:44651247-44651266 Msa0642710:intron 35.0%
TATTCGCAGTTGAATGAAAC+TGG + chr4_3:44651527-44651546 Msa0642710:intron 35.0%
!! AGTTGAATGAAACTGGTTTG+AGG + chr4_3:44651534-44651553 Msa0642710:intron 35.0%
!! GTTGAATGAAACTGGTTTGA+GGG + chr4_3:44651535-44651554 Msa0642710:intron 35.0%
! CATTAGCTCTTTGTTTGAAC+AGG + chr4_3:44651743-44651762 Msa0642710:intron 35.0%
! TGTTTGATGAGGTATCAGAT+AGG - chr4_3:44651822-44651841 None:intergenic 35.0%
AACATAAGAGATAATAGGGC+TGG + chr4_3:44651910-44651929 Msa0642710:CDS 35.0%
ACATAAGAGATAATAGGGCT+GGG + chr4_3:44651911-44651930 Msa0642710:CDS 35.0%
ATGTAATTCCTTGTAGACAG+TGG - chr4_3:44651948-44651967 None:intergenic 35.0%
TGCAAATTGAGTCAGTAGAT+AGG + chr4_3:44652028-44652047 Msa0642710:CDS 35.0%
! CATCAGTTTGTAAGCTTTGT+TGG - chr4_3:44652146-44652165 None:intergenic 35.0%
TAATAATCAGGTATCCAGTG+AGG + chr4_3:44652179-44652198 Msa0642710:CDS 35.0%
TCAGAAATACAGCAAATGAG+TGG + chr4_3:44652421-44652440 Msa0642710:CDS 35.0%
! AATGGTTCTGTTTATCTTGC+AGG + chr4_3:44652725-44652744 Msa0642710:intron 35.0%
TCAAGATCAGATTGTTGATC+AGG + chr4_3:44652891-44652910 Msa0642710:CDS 35.0%
TAACACATAGTTACTAGAGG+CGG - chr4_3:44653030-44653049 None:intergenic 35.0%
AATAATTTCCAAATCCTGCC+AGG - chr4_3:44653140-44653159 None:intergenic 35.0%
TAATGACTTGAGACTTGACA+TGG + chr4_3:44653159-44653178 Msa0642710:CDS 35.0%
AAAGGATGAATACTATGCAG+AGG + chr4_3:44653194-44653213 Msa0642710:CDS 35.0%
TGATTTCTTTACCCTTCATC+AGG + chr4_3:44653316-44653335 Msa0642710:intron 35.0%
AACCGAGTTAAATTTATCCC+AGG + chr4_3:44653377-44653396 Msa0642710:intron 35.0%
AAATGGGAATGTGTGAGAAA+AGG + chr4_3:44653434-44653453 Msa0642710:CDS 35.0%
CAGACGTTTCAATCAGAAAA+TGG - chr4_3:44653515-44653534 None:intergenic 35.0%
! CATCTACAACAAAAGCACAA+TGG - chr4_3:44653575-44653594 None:intergenic 35.0%
!! TTGTGCTTTTGTTGTAGATG+TGG + chr4_3:44653575-44653594 Msa0642710:intron 35.0%
!! TCTACTTTGAAGCAACTCAT+TGG - chr4_3:44653627-44653646 None:intergenic 35.0%
ATGAGTTGCTTCAAAGTAGA+AGG + chr4_3:44653627-44653646 Msa0642710:CDS 35.0%
ATTCATGTCAAGTACTCCAA+AGG + chr4_3:44653831-44653850 Msa0642710:three_prime_UTR 35.0%
!! ACATCTTTTGTTTGATGTCG+AGG + chr4_3:44653932-44653951 Msa0642710:three_prime_UTR 35.0%
CCAGCCACCTAAAATAAAAA+AGG - chr4_3:44653969-44653988 None:intergenic 35.0%
!!! CCTTTTTTATTTTAGGTGGC+TGG + chr4_3:44653966-44653985 Msa0642710:three_prime_UTR 35.0%
CCACAATTACATAATGAGAC+AGG - chr4_3:44654023-44654042 None:intergenic 35.0%
CCTGTCTCATTATGTAATTG+TGG + chr4_3:44654020-44654039 Msa0642710:three_prime_UTR 35.0%
!! AAATTGGTTTGCCATTGAAG+TGG + chr4_3:44654100-44654119 Msa0642710:three_prime_UTR 35.0%
!! AATTTGTGCTGGTTTGTTTG+TGG + chr4_3:44654190-44654209 Msa0642710:three_prime_UTR 35.0%
! ATTTGCTTGGTTGGAAGTTT+TGG + chr4_3:44654307-44654326 Msa0642710:three_prime_UTR 35.0%
!!! TTTCTTTGGCTGTTGGTTTT+TGG + chr4_3:44654406-44654425 Msa0642710:three_prime_UTR 35.0%
TCTCTTCTTCCTTCACTTCT+AGG + chr4_3:44647048-44647067 Msa0642710:five_prime_UTR 40.0%
CTCTTCTTCCTTCACTTCTA+GGG + chr4_3:44647049-44647068 Msa0642710:five_prime_UTR 40.0%
AAACGTAACCCTAGAAGTGA+AGG - chr4_3:44647060-44647079 None:intergenic 40.0%
AAACTGGATTGTGGAATCTG+AGG + chr4_3:44647439-44647458 Msa0642710:intron 40.0%
AATGCAGGATGAGGTATAGT+TGG + chr4_3:44647590-44647609 Msa0642710:intron 40.0%
CGCCGCAAATCATCATTATA+AGG - chr4_3:44647666-44647685 None:intergenic 40.0%
GCAATTAACAAAAGTGGTGG+AGG + chr4_3:44647700-44647719 Msa0642710:five_prime_UTR 40.0%
AAACTTGAAATGGCGATTGC+TGG + chr4_3:44647876-44647895 Msa0642710:exon 40.0%
GGATATTGAGGATGAACATG+CGG + chr4_3:44648022-44648041 Msa0642710:CDS 40.0%
GTGAAGTAGTACTTGAACGA+AGG + chr4_3:44648069-44648088 Msa0642710:CDS 40.0%
!! TGGTTTGGAAGATGCAGTTT+TGG + chr4_3:44648160-44648179 Msa0642710:CDS 40.0%
! GGTTTGGAAGATGCAGTTTT+GGG + chr4_3:44648161-44648180 Msa0642710:CDS 40.0%
TGAATCTCATGATGGTCATG+AGG + chr4_3:44648226-44648245 Msa0642710:CDS 40.0%
! CTGTTTTCGGAGAAGTTGAA+AGG + chr4_3:44648279-44648298 Msa0642710:CDS 40.0%
AAGTTGAAAGGGAAAGAGTG+CGG + chr4_3:44648291-44648310 Msa0642710:CDS 40.0%
TTCAGGGAATGGATGAATAC+TGG + chr4_3:44648320-44648339 Msa0642710:CDS 40.0%
CCTAGGAATTTCACTTCTTC+GGG - chr4_3:44648357-44648376 None:intergenic 40.0%
CCCTAGGAATTTCACTTCTT+CGG - chr4_3:44648358-44648377 None:intergenic 40.0%
CCGAAGAAGTGAAATTCCTA+GGG + chr4_3:44648355-44648374 Msa0642710:CDS 40.0%
CGAAGAAGTGAAATTCCTAG+GGG + chr4_3:44648356-44648375 Msa0642710:CDS 40.0%
AGGAAAGGGTGAGAGTTATA+AGG + chr4_3:44648402-44648421 Msa0642710:CDS 40.0%
GGAAAGGGTGAGAGTTATAA+GGG + chr4_3:44648403-44648422 Msa0642710:CDS 40.0%
GGTGAGAGTTATAAGGGAAT+GGG + chr4_3:44648409-44648428 Msa0642710:CDS 40.0%
!! AGCAGAGAAGTGTTTCTTCT+GGG + chr4_3:44648447-44648466 Msa0642710:CDS 40.0%
! TGTTTCTTCTGGGGAAAACA+GGG + chr4_3:44648457-44648476 Msa0642710:CDS 40.0%
ATTTGTCGTTAACCACAGTG+AGG + chr4_3:44648529-44648548 Msa0642710:CDS 40.0%
TTTGTCGTTAACCACAGTGA+GGG + chr4_3:44648530-44648549 Msa0642710:CDS 40.0%
! AGGAGTATGCGTAAATTACG+CGG + chr4_3:44648572-44648591 Msa0642710:CDS 40.0%
ATATGCTTAAGAAGGCTGAG+AGG + chr4_3:44648612-44648631 Msa0642710:CDS 40.0%
TATGCTTAAGAAGGCTGAGA+GGG + chr4_3:44648613-44648632 Msa0642710:CDS 40.0%
AAGTCTGTTTCGCATTACCT+AGG - chr4_3:44648847-44648866 None:intergenic 40.0%
ACAGATCTGTTGACCATAAC+AGG + chr4_3:44649001-44649020 Msa0642710:CDS 40.0%
TTCACTTTCTGCTACAGATG+TGG - chr4_3:44649028-44649047 None:intergenic 40.0%
AGGCAAAGACAAACTGTATC+AGG + chr4_3:44649060-44649079 Msa0642710:CDS 40.0%
GACAAACTGTATCAGGTCTA+AGG + chr4_3:44649067-44649086 Msa0642710:CDS 40.0%
TTATGATACATCGTGTGTGC+AGG + chr4_3:44649236-44649255 Msa0642710:intron 40.0%
! GAGCTTGGTCGGAATATTTT+AGG + chr4_3:44649445-44649464 Msa0642710:intron 40.0%
!! GCTTGGTCGGAATATTTTAG+GGG + chr4_3:44649447-44649466 Msa0642710:intron 40.0%
CCCATTTCTTGGCAAAAATG+TGG - chr4_3:44649616-44649635 None:intergenic 40.0%
! GTTCAGTTTTGCATATGCCT+TGG - chr4_3:44649835-44649854 None:intergenic 40.0%
TCATCGAACCAAACTCAGAA+AGG + chr4_3:44650090-44650109 Msa0642710:intron 40.0%
TGTGATATAGTGTAGTGTGG+CGG + chr4_3:44650188-44650207 Msa0642710:intron 40.0%
! GACTGCTATTGCAATTTTGG+GGG + chr4_3:44650339-44650358 Msa0642710:intron 40.0%
AAGCAGCCACAATTAAACAC+GGG - chr4_3:44650460-44650479 None:intergenic 40.0%
GAAGAACTCAAATGAGAGCA+AGG - chr4_3:44650518-44650537 None:intergenic 40.0%
TAGAGCAAGGAGTAAAACGA+AGG - chr4_3:44650557-44650576 None:intergenic 40.0%
CTTTGCACAGAAATAGAGCA+AGG - chr4_3:44650570-44650589 None:intergenic 40.0%
!! CTTGCTCTATTTCTGTGCAA+AGG + chr4_3:44650568-44650587 Msa0642710:intron 40.0%
!!! TCGTGTTTTGTTTTCTGAGG+TGG + chr4_3:44650675-44650694 Msa0642710:intron 40.0%
! CTATCTGAGATTGACCACAT+AGG + chr4_3:44650950-44650969 Msa0642710:intron 40.0%
GAGATGCAACAGTTGGAATT+AGG + chr4_3:44651064-44651083 Msa0642710:intron 40.0%
GTAGGTGAAATGTGAGAGAA+AGG + chr4_3:44651107-44651126 Msa0642710:intron 40.0%
! TGTCCACATGCTCATTTTCT+AGG + chr4_3:44651371-44651390 Msa0642710:intron 40.0%
! GTCCACATGCTCATTTTCTA+GGG + chr4_3:44651372-44651391 Msa0642710:intron 40.0%
CACGAATTGCCTTACAACAA+CGG + chr4_3:44651483-44651502 Msa0642710:intron 40.0%
ACGAATTGCCTTACAACAAC+GGG + chr4_3:44651484-44651503 Msa0642710:intron 40.0%
ACAAAAAGCCCGTTGTTGTA+AGG - chr4_3:44651495-44651514 None:intergenic 40.0%
!! TACAACAACGGGCTTTTTGT+TGG + chr4_3:44651495-44651514 Msa0642710:intron 40.0%
!! ACAACAACGGGCTTTTTGTT+GGG + chr4_3:44651496-44651515 Msa0642710:intron 40.0%
AAATTCCCACTGCATTCAGA+TGG + chr4_3:44651587-44651606 Msa0642710:intron 40.0%
TTGATCCATCTGAATGCAGT+GGG - chr4_3:44651595-44651614 None:intergenic 40.0%
TTTGATCCATCTGAATGCAG+TGG - chr4_3:44651596-44651615 None:intergenic 40.0%
TGGAGAAAGCAGTTCTTGTA+TGG + chr4_3:44651873-44651892 Msa0642710:CDS 40.0%
CATAAGAGATAATAGGGCTG+GGG + chr4_3:44651912-44651931 Msa0642710:CDS 40.0%
AATCTACTGCCCATGTAGAA+GGG + chr4_3:44651989-44652008 Msa0642710:CDS 40.0%
! CAACTGATTCCCTTCTACAT+GGG - chr4_3:44652001-44652020 None:intergenic 40.0%
TGTGAAAGAAGAGATTGCAC+TGG + chr4_3:44652072-44652091 Msa0642710:CDS 40.0%
GTGAAAGAAGAGATTGCACT+GGG + chr4_3:44652073-44652092 Msa0642710:CDS 40.0%
TTGCTCATTATGTACCTCAC+TGG - chr4_3:44652196-44652215 None:intergenic 40.0%
ACATAATGAGCAATCTGAGC+TGG + chr4_3:44652203-44652222 Msa0642710:CDS 40.0%
CATAATGAGCAATCTGAGCT+GGG + chr4_3:44652204-44652223 Msa0642710:CDS 40.0%
GAGCTGGGTGATATAAGTAA+TGG + chr4_3:44652219-44652238 Msa0642710:CDS 40.0%
!! GTTGATGATGTGAATGGATC+TGG + chr4_3:44652288-44652307 Msa0642710:CDS 40.0%
TTGAAAATGAAGGAAGTGGC+TGG + chr4_3:44652340-44652359 Msa0642710:CDS 40.0%
!! AAATAGCACCGATGAAAGTG+TGG + chr4_3:44652386-44652405 Msa0642710:CDS 40.0%
! TCATTGACCCAACTGTTTTC+AGG - chr4_3:44652447-44652466 None:intergenic 40.0%
TGAAAACAGTTGGGTCAATG+AGG + chr4_3:44652446-44652465 Msa0642710:CDS 40.0%
AGGATGTAGAAAACCCTCAT+CGG + chr4_3:44652466-44652485 Msa0642710:CDS 40.0%
GAAGTTTGGCAAGAAGATAG+TGG + chr4_3:44652501-44652520 Msa0642710:CDS 40.0%
! TCCTCCTAACCAATTTTCCA+CGG - chr4_3:44652538-44652557 None:intergenic 40.0%
TACTACTTGGAGCAGTTTCA+TGG - chr4_3:44652569-44652588 None:intergenic 40.0%
AACTCAGGGAACTTCATAGT+AGG + chr4_3:44652637-44652656 Msa0642710:CDS 40.0%
AAGACAAGGTCATGCTAACA+TGG + chr4_3:44652819-44652838 Msa0642710:CDS 40.0%
AGATCAGATTGTTGATCAGG+AGG + chr4_3:44652894-44652913 Msa0642710:CDS 40.0%
GATCAGATTGTTGATCAGGA+GGG + chr4_3:44652895-44652914 Msa0642710:CDS 40.0%
TTATCATCCACACTTTCTCC+TGG + chr4_3:44653119-44653138 Msa0642710:intron 40.0%
ACATGGCTAGATTACAGCAA+AGG + chr4_3:44653176-44653195 Msa0642710:CDS 40.0%
TAAAATGCGGACCTGATGAA+GGG - chr4_3:44653330-44653349 None:intergenic 40.0%
ATAAAATGCGGACCTGATGA+AGG - chr4_3:44653331-44653350 None:intergenic 40.0%
AATCGCATTCACGTATTCCT+GGG - chr4_3:44653397-44653416 None:intergenic 40.0%
! AACAAAAGCACAATGGCAGT+CGG - chr4_3:44653568-44653587 None:intergenic 40.0%
ATCCTGAACATGTGCACAAA+TGG - chr4_3:44653601-44653620 None:intergenic 40.0%
TACGTATAACCTCCAACACA+GGG - chr4_3:44653673-44653692 None:intergenic 40.0%
CTCTAACAAGTTATATCGCC+TGG + chr4_3:44653752-44653771 Msa0642710:three_prime_UTR 40.0%
TACTCCAAAGGAACACATGA+TGG + chr4_3:44653843-44653862 Msa0642710:three_prime_UTR 40.0%
AATGCCATCATGTGTTCCTT+TGG - chr4_3:44653850-44653869 None:intergenic 40.0%
ATGTGTCGAGACTCATGTTT+GGG + chr4_3:44654053-44654072 Msa0642710:three_prime_UTR 40.0%
TGATAGAGACCATAAGAGTC+AGG - chr4_3:44654134-44654153 None:intergenic 40.0%
TCACCCCACATAACTATTTG+TGG + chr4_3:44654375-44654394 Msa0642710:three_prime_UTR 40.0%
!!! TGCTCAACTCGTCGTTTTTG+AGG + chr4_3:44647916-44647935 Msa0642710:CDS 45.0%
!!! GCTCAACTCGTCGTTTTTGA+GGG + chr4_3:44647917-44647936 Msa0642710:CDS 45.0%
ATGGGAGAAGTGGAAGCAAT+CGG + chr4_3:44647973-44647992 Msa0642710:CDS 45.0%
!! CGTCTTCGCTTTTGCAAATG+TGG + chr4_3:44647997-44648016 Msa0642710:CDS 45.0%
!! CTTCGCTTTTGCAAATGTGG+CGG + chr4_3:44648000-44648019 Msa0642710:CDS 45.0%
!! TTCGCTTTTGCAAATGTGGC+GGG + chr4_3:44648001-44648020 Msa0642710:CDS 45.0%
GAGTCATGTTCAAGGAAGAG+CGG + chr4_3:44648046-44648065 Msa0642710:CDS 45.0%
AGTCATGTTCAAGGAAGAGC+GGG + chr4_3:44648047-44648066 Msa0642710:CDS 45.0%
TCTCCTATATCTGGGCTATC+AGG - chr4_3:44648134-44648153 None:intergenic 45.0%
ATAGCCCAGATATAGGAGAG+AGG + chr4_3:44648135-44648154 Msa0642710:CDS 45.0%
!!! AGTTTTGGGTGAGAGTGAGT+CGG + chr4_3:44648175-44648194 Msa0642710:CDS 45.0%
CCCGAAGAAGTGAAATTCCT+AGG + chr4_3:44648354-44648373 Msa0642710:CDS 45.0%
TTGGAGAAACCGAACAGGAA+AGG + chr4_3:44648387-44648406 Msa0642710:CDS 45.0%
TGGAGAAACCGAACAGGAAA+GGG + chr4_3:44648388-44648407 Msa0642710:CDS 45.0%
AACTCTCACCCTTTCCTGTT+CGG - chr4_3:44648399-44648418 None:intergenic 45.0%
GGGTGAGAGTTATAAGGGAA+TGG + chr4_3:44648408-44648427 Msa0642710:CDS 45.0%
CAGAAGAAACACTTCTCTGC+TGG - chr4_3:44648448-44648467 None:intergenic 45.0%
!! CAGCAGAGAAGTGTTTCTTC+TGG + chr4_3:44648446-44648465 Msa0642710:CDS 45.0%
!! GCAGAGAAGTGTTTCTTCTG+GGG + chr4_3:44648448-44648467 Msa0642710:CDS 45.0%
! GTGTTTCTTCTGGGGAAAAC+AGG + chr4_3:44648456-44648475 Msa0642710:CDS 45.0%
TGTGTACCAATTTCAGCACG+TGG - chr4_3:44648488-44648507 None:intergenic 45.0%
CAAATTGAACGTGTGCGTGA+TGG + chr4_3:44648506-44648525 Msa0642710:CDS 45.0%
! ACTCATTTTGTCCCTCACTG+TGG - chr4_3:44648544-44648563 None:intergenic 45.0%
TTAAGAAGGCTGAGAGGGAA+AGG + chr4_3:44648618-44648637 Msa0642710:CDS 45.0%
GAGAGAAATTCACGAGTTGC+TGG + chr4_3:44648643-44648662 Msa0642710:CDS 45.0%
GAAAACGTGATACAGCCTGA+TGG - chr4_3:44648670-44648689 None:intergenic 45.0%
AACCTGAATGCGATTGCGAT+GGG - chr4_3:44648693-44648712 None:intergenic 45.0%
AAACCTGAATGCGATTGCGA+TGG - chr4_3:44648694-44648713 None:intergenic 45.0%
CACGACTGATGGTAAACAGA+TGG - chr4_3:44648767-44648786 None:intergenic 45.0%
GTACTGTCTTACACGACTGA+TGG - chr4_3:44648778-44648797 None:intergenic 45.0%
! TGTTTGCAGGCATTGCTTAG+AGG + chr4_3:44648961-44648980 Msa0642710:intron 45.0%
CTACAGATGTGGACCTGTTA+TGG - chr4_3:44649017-44649036 None:intergenic 45.0%
CTATTCGGTTAAGTTAGGGG+TGG - chr4_3:44649362-44649381 None:intergenic 45.0%
AACTGAACTCCTATGGTCAG+TGG + chr4_3:44649420-44649439 Msa0642710:intron 45.0%
GCTGACATAGTGGTTATTGC+TGG + chr4_3:44649530-44649549 Msa0642710:intron 45.0%
GGCAAAAATGTGGAACACGA+GGG - chr4_3:44649606-44649625 None:intergenic 45.0%
TGGCAAAAATGTGGAACACG+AGG - chr4_3:44649607-44649626 None:intergenic 45.0%
!! CCACCGTTTTTGCAACGTAT+TGG - chr4_3:44649672-44649691 None:intergenic 45.0%
CCAATACGTTGCAAAAACGG+TGG + chr4_3:44649669-44649688 Msa0642710:intron 45.0%
! AGTTTTGCATATGCCTTGGG+CGG - chr4_3:44649831-44649850 None:intergenic 45.0%
CGCTTTGCAAGACTATGACA+TGG - chr4_3:44650229-44650248 None:intergenic 45.0%
GCTATTGCTGCTACTCTCAA+CGG - chr4_3:44650252-44650271 None:intergenic 45.0%
GTTGAGAGTAGCAGCAATAG+CGG + chr4_3:44650251-44650270 Msa0642710:intron 45.0%
GCAATAGCGGCAACAATTTG+CGG + chr4_3:44650264-44650283 Msa0642710:intron 45.0%
! GTTGAAAAGCAGTGCCATTG+CGG + chr4_3:44650286-44650305 Msa0642710:intron 45.0%
TCAAACCACACTACAGTAGC+AGG - chr4_3:44650318-44650337 None:intergenic 45.0%
!! ATAGCGGTATAGCGGATTTC+AGG - chr4_3:44650900-44650919 None:intergenic 45.0%
AATTAGGAGATATGGGGCGT+AGG + chr4_3:44651080-44651099 Msa0642710:intron 45.0%
ATTAGGAGATATGGGGCGTA+GGG + chr4_3:44651081-44651100 Msa0642710:intron 45.0%
GACCCTAGAAAATGAGCATG+TGG - chr4_3:44651377-44651396 None:intergenic 45.0%
! GCTCTTTGTTTGAACAGGGA+AGG + chr4_3:44651748-44651767 Msa0642710:intron 45.0%
GGAAGGATTCTTCTCCAGAA+TGG + chr4_3:44651765-44651784 Msa0642710:CDS 45.0%
TTCTCCAGAATGGACAGTAC+CGG + chr4_3:44651775-44651794 Msa0642710:CDS 45.0%
! TGAGGTATCAGATAGGTTGC+TGG - chr4_3:44651815-44651834 None:intergenic 45.0%
GAATCTACTGCCCATGTAGA+AGG + chr4_3:44651988-44652007 Msa0642710:CDS 45.0%
! GCAACTGATTCCCTTCTACA+TGG - chr4_3:44652002-44652021 None:intergenic 45.0%
AGGCAGTCATCATTCAGTGA+TGG + chr4_3:44652048-44652067 Msa0642710:CDS 45.0%
GGCAGTCATCATTCAGTGAT+GGG + chr4_3:44652049-44652068 Msa0642710:CDS 45.0%
CACTGGGCAAAATGTTGATG+TGG + chr4_3:44652089-44652108 Msa0642710:CDS 45.0%
GGCATCAGAGTAACACTGAA+TGG + chr4_3:44652361-44652380 Msa0642710:CDS 45.0%
ATGAGTGGCCTGAAAACAGT+TGG + chr4_3:44652436-44652455 Msa0642710:CDS 45.0%
TGAGTGGCCTGAAAACAGTT+GGG + chr4_3:44652437-44652456 Msa0642710:CDS 45.0%
!! GGCAAGAAGCTTCTGAAGTT+TGG + chr4_3:44652487-44652506 Msa0642710:CDS 45.0%
! AGAAGATAGTGGCTTCCAAG+AGG + chr4_3:44652512-44652531 Msa0642710:CDS 45.0%
AGACGTGTGTCTAATCTCCT+CGG + chr4_3:44652748-44652767 Msa0642710:CDS 45.0%
AAGGTCATGCTAACATGGAG+TGG + chr4_3:44652824-44652843 Msa0642710:CDS 45.0%
AGGTCATGCTAACATGGAGT+GGG + chr4_3:44652825-44652844 Msa0642710:CDS 45.0%
AGCATCCTCATGGTGATAAC+TGG + chr4_3:44652983-44653002 Msa0642710:CDS 45.0%
TACTATGCAGAGGATGCTTG+AGG + chr4_3:44653204-44653223 Msa0642710:CDS 45.0%
GAATCGCATTCACGTATTCC+TGG - chr4_3:44653398-44653417 None:intergenic 45.0%
ACGTATAACCTCCAACACAG+GGG - chr4_3:44653672-44653691 None:intergenic 45.0%
GTACGTATAACCTCCAACAC+AGG - chr4_3:44653674-44653693 None:intergenic 45.0%
!! AAAAGTACCTGGAGATGTCC+AGG - chr4_3:44653773-44653792 None:intergenic 45.0%
GATGTGTCGAGACTCATGTT+TGG + chr4_3:44654052-44654071 Msa0642710:three_prime_UTR 45.0%
AGGCAAGCAATCCACTTCAA+TGG - chr4_3:44654114-44654133 None:intergenic 45.0%
GATTGCTTGCCTGACTCTTA+TGG + chr4_3:44654122-44654141 Msa0642710:three_prime_UTR 45.0%
!! TGCTTGGTTGGAAGTTTTGG+TGG + chr4_3:44654310-44654329 Msa0642710:three_prime_UTR 45.0%
!! GCTTGGTTGGAAGTTTTGGT+GGG + chr4_3:44654311-44654330 Msa0642710:three_prime_UTR 45.0%
!! AAAAATAAATAATTAACATA+AGG - chr4_3:44647568-44647587 None:intergenic 5.0%
!!! TTATGTTAATTATTTATTTT+TGG + chr4_3:44647567-44647586 Msa0642710:intron 5.0%
!! TATTATAATAAATAGTTAAA+TGG - chr4_3:44649128-44649147 None:intergenic 5.0%
!!! AAACTTTTTTATTTATTTTT+TGG + chr4_3:44649197-44649216 Msa0642710:intron 5.0%
!! AAAAAAAAACAAAAAAATTA+GGG - chr4_3:44650380-44650399 None:intergenic 5.0%
!! TAAAAAAAAACAAAAAAATT+AGG - chr4_3:44650381-44650400 None:intergenic 5.0%
AGAGAGAGAGAGAGAGGGAA+CGG - chr4_3:44646976-44646995 None:intergenic 50.0%
CAGAGAGAGAGAGAGAGAGA+GGG - chr4_3:44646981-44647000 None:intergenic 50.0%
TTTGAGGGATTCGCAGTCTC+AGG + chr4_3:44647932-44647951 Msa0642710:CDS 50.0%
! GCAAATGTGGCGGGATATTG+AGG + chr4_3:44648010-44648029 Msa0642710:CDS 50.0%
CATGCGGTGAGTCATGTTCA+AGG + chr4_3:44648038-44648057 Msa0642710:CDS 50.0%
GCACCTGATAGCCCAGATAT+AGG + chr4_3:44648128-44648147 Msa0642710:CDS 50.0%
CACGCCTCTCTCCTATATCT+GGG - chr4_3:44648142-44648161 None:intergenic 50.0%
! TATAGGAGAGAGGCGTGGTT+TGG + chr4_3:44648145-44648164 Msa0642710:CDS 50.0%
GTGAGAGTGAGTCGGATACA+TGG + chr4_3:44648183-44648202 Msa0642710:CDS 50.0%
!! AAAGAGTGCGGCGAGTTTTC+AGG + chr4_3:44648303-44648322 Msa0642710:CDS 50.0%
!! AAGAGTGCGGCGAGTTTTCA+GGG + chr4_3:44648304-44648323 Msa0642710:CDS 50.0%
GTGAAATTCCTAGGGGAGAG+TGG + chr4_3:44648363-44648382 Msa0642710:CDS 50.0%
ACCTGAATGCGATTGCGATG+GGG - chr4_3:44648692-44648711 None:intergenic 50.0%
CAAGCTCTACCACTGACCAT+AGG - chr4_3:44649432-44649451 None:intergenic 50.0%
CTATGGTCAGTGGTAGAGCT+TGG + chr4_3:44649430-44649449 Msa0642710:intron 50.0%
AGTGGTTATTGCTGGCGTAG+TGG + chr4_3:44649538-44649557 Msa0642710:intron 50.0%
TATACTGCATGCTGGCGTAG+TGG - chr4_3:44649699-44649718 None:intergenic 50.0%
!! ATGGCTTGGTTCGACGAATG+TGG - chr4_3:44650030-44650049 None:intergenic 50.0%
GACTATGACATGGCAGTGGA+GGG - chr4_3:44650219-44650238 None:intergenic 50.0%
AGACTATGACATGGCAGTGG+AGG - chr4_3:44650220-44650239 None:intergenic 50.0%
GCAAGACTATGACATGGCAG+TGG - chr4_3:44650223-44650242 None:intergenic 50.0%
GCAATCCTGCTACTGTAGTG+TGG + chr4_3:44650310-44650329 Msa0642710:intron 50.0%
!! TTCTGAGGTGGACACAGATG+TGG + chr4_3:44650687-44650706 Msa0642710:intron 50.0%
TGCAGTTGAGTTCACTGTGC+AGG + chr4_3:44651302-44651321 Msa0642710:intron 50.0%
! CAGATAGGTTGCTGGTTGCT+TGG - chr4_3:44651807-44651826 None:intergenic 50.0%
TCTGGTGACCACTGTCTACA+AGG + chr4_3:44651937-44651956 Msa0642710:CDS 50.0%
!! TGGTGCTCTAGAAGAACAGC+TGG + chr4_3:44652308-44652327 Msa0642710:CDS 50.0%
CAGAAGCTTCTTGCCGATGA+GGG - chr4_3:44652482-44652501 None:intergenic 50.0%
TCAGAAGCTTCTTGCCGATG+AGG - chr4_3:44652483-44652502 None:intergenic 50.0%
TCCAAGAGGCCGTGGAAAAT+TGG + chr4_3:44652526-44652545 Msa0642710:CDS 50.0%
! ACCAATTTTCCACGGCCTCT+TGG - chr4_3:44652530-44652549 None:intergenic 50.0%
GAGGCCGTGGAAAATTGGTT+AGG + chr4_3:44652531-44652550 Msa0642710:CDS 50.0%
GCCGTGGAAAATTGGTTAGG+AGG + chr4_3:44652534-44652553 Msa0642710:CDS 50.0%
GGAGCAGTTTCATGGTCAGA+AGG - chr4_3:44652561-44652580 None:intergenic 50.0%
TCAACTGGTCAAGACTCGCA+CGG - chr4_3:44652783-44652802 None:intergenic 50.0%
TGCTAACATGGAGTGGGATC+CGG + chr4_3:44652831-44652850 Msa0642710:CDS 50.0%
CTGCTCAAGGTTAGCAGATG+GGG - chr4_3:44652866-44652885 None:intergenic 50.0%
GCTGCTCAAGGTTAGCAGAT+GGG - chr4_3:44652867-44652886 None:intergenic 50.0%
TGCTGCTCAAGGTTAGCAGA+TGG - chr4_3:44652868-44652887 None:intergenic 50.0%
GATCTTGACTCTGCTGCTCA+AGG - chr4_3:44652879-44652898 None:intergenic 50.0%
GTAGGAGGTGAAGGCAAAGA+GGG - chr4_3:44652946-44652965 None:intergenic 50.0%
AGTAGGAGGTGAAGGCAAAG+AGG - chr4_3:44652947-44652966 None:intergenic 50.0%
ACCTCCTACTCCACCTCTTT+GGG + chr4_3:44652957-44652976 Msa0642710:CDS 50.0%
TGATCCCAAAGAGGTGGAGT+AGG - chr4_3:44652964-44652983 None:intergenic 50.0%
TGAGGATGCTGATCCCAAAG+AGG - chr4_3:44652973-44652992 None:intergenic 50.0%
!! CTTTGGGATCAGCATCCTCA+TGG + chr4_3:44652973-44652992 Msa0642710:CDS 50.0%
TGCGACCAGTTATCACCATG+AGG - chr4_3:44652991-44653010 None:intergenic 50.0%
AATCCTGCCAGGAGAAAGTG+TGG - chr4_3:44653129-44653148 None:intergenic 50.0%
CACTTTCTCCTGGCAGGATT+TGG + chr4_3:44653129-44653148 Msa0642710:intron 50.0%
GAGGATGCTTGAGGCATGTA+TGG + chr4_3:44653213-44653232 Msa0642710:CDS 50.0%
! AATCGCTCAGCTGGTTCATC+AGG + chr4_3:44653289-44653308 Msa0642710:CDS 50.0%
! CGTCTGTAGCTAGTTTGCAC+CGG + chr4_3:44653529-44653548 Msa0642710:intron 50.0%
GGCCATTTGTGCACATGTTC+AGG + chr4_3:44653596-44653615 Msa0642710:CDS 50.0%
! ACACAGGGGCATGACACATT+GGG - chr4_3:44653658-44653677 None:intergenic 50.0%
! AACACAGGGGCATGACACAT+TGG - chr4_3:44653659-44653678 None:intergenic 50.0%
AATGTGTCATGCCCCTGTGT+TGG + chr4_3:44653658-44653677 Msa0642710:CDS 50.0%
TATATCGCCTGGACATCTCC+AGG + chr4_3:44653763-44653782 Msa0642710:three_prime_UTR 50.0%
GAGAGGGAACGGAGAAAGAG+CGG - chr4_3:44646965-44646984 None:intergenic 55.0%
GCAGAGAGAGAGAGAGAGAG+AGG - chr4_3:44646982-44647001 None:intergenic 55.0%
CTTCACCACGATGAGCCGAA+TGG + chr4_3:44647403-44647422 Msa0642710:intron 55.0%
CGTCGAGAAGGAGAGGAGAT+GGG + chr4_3:44647955-44647974 Msa0642710:CDS 55.0%
AGGAGAGGAGATGGGAGAAG+TGG + chr4_3:44647963-44647982 Msa0642710:CDS 55.0%
CCACGCCTCTCTCCTATATC+TGG - chr4_3:44648143-44648162 None:intergenic 55.0%
CCAGATATAGGAGAGAGGCG+TGG + chr4_3:44648140-44648159 Msa0642710:CDS 55.0%
!! TGCGGCGAGTTTTCAGGGAA+TGG + chr4_3:44648309-44648328 Msa0642710:CDS 55.0%
ATTCCTAGGGGAGAGTGGCT+TGG + chr4_3:44648368-44648387 Msa0642710:CDS 55.0%
! GTGGCTTGGAGAAACCGAAC+AGG + chr4_3:44648382-44648401 Msa0642710:CDS 55.0%
GAGCAGCCACGTGCTGAAAT+TGG + chr4_3:44648479-44648498 Msa0642710:CDS 55.0%
GCGTAAATTACGCGGCAGAC+AGG + chr4_3:44648580-44648599 Msa0642710:CDS 55.0%
TCACGAGTTGCTGGACCATC+AGG + chr4_3:44648652-44648671 Msa0642710:CDS 55.0%
TCCCCATCGCAATCGCATTC+AGG + chr4_3:44648688-44648707 Msa0642710:CDS 55.0%
! TGCAGGCATTGCTTAGAGGC+AGG + chr4_3:44648965-44648984 Msa0642710:intron 55.0%
GGTCAGTGGTAGAGCTTGGT+CGG + chr4_3:44649434-44649453 Msa0642710:intron 55.0%
!! GGCGGTGGTGGATCTTAGTT+AGG - chr4_3:44649813-44649832 None:intergenic 55.0%
TTTGCATATGCCTTGGGCGG+TGG - chr4_3:44649828-44649847 None:intergenic 55.0%
ATATGGGGCGTAGGGCATGT+AGG + chr4_3:44651089-44651108 Msa0642710:intron 55.0%
GCAACCGGTACTGTCCATTC+TGG - chr4_3:44651782-44651801 None:intergenic 55.0%
TCGCACGGAAACTACTTCCG+AGG - chr4_3:44652768-44652787 None:intergenic 55.0%
GGCAAAGAGGGCAAGTCAAG+TGG - chr4_3:44652934-44652953 None:intergenic 55.0%
AGAGGTGGAGTAGGAGGTGA+AGG - chr4_3:44652955-44652974 None:intergenic 55.0%
CACCTCCTACTCCACCTCTT+TGG + chr4_3:44652956-44652975 Msa0642710:CDS 55.0%
TCCCAAAGAGGTGGAGTAGG+AGG - chr4_3:44652961-44652980 None:intergenic 55.0%
GGATGCTGATCCCAAAGAGG+TGG - chr4_3:44652970-44652989 None:intergenic 55.0%
CATCCACACTTTCTCCTGGC+AGG + chr4_3:44653123-44653142 Msa0642710:intron 55.0%
GCAGCACTAAATCGCTCAGC+TGG + chr4_3:44653280-44653299 Msa0642710:CDS 55.0%
CACAGCCATTCGGCTCATCG+TGG - chr4_3:44647411-44647430 None:intergenic 60.0%
!! TCTCAGGCGTCGAGAAGGAG+AGG + chr4_3:44647948-44647967 Msa0642710:CDS 60.0%
GCGTCGAGAAGGAGAGGAGA+TGG + chr4_3:44647954-44647973 Msa0642710:CDS 60.0%
TCTCCAAGCCACTCTCCCCT+AGG - chr4_3:44648374-44648393 None:intergenic 60.0%
CTAAGATCCACCACCGCCCA+AGG + chr4_3:44649815-44649834 Msa0642710:intron 60.0%
GTAGCAGGATTGCGCCGCAA+TGG - chr4_3:44650303-44650322 None:intergenic 60.0%
GCTGGTTGCTTGGCTGCAAC+CGG - chr4_3:44651797-44651816 None:intergenic 60.0%
TAGTGGCTTCCAAGAGGCCG+TGG + chr4_3:44652518-44652537 Msa0642710:CDS 60.0%
GCAGATGGGGCTGCATCTTC+CGG - chr4_3:44652853-44652872 None:intergenic 60.0%
GTGTCATGCCCCTGTGTTGG+AGG + chr4_3:44653661-44653680 Msa0642710:CDS 60.0%
!! CGCAGTCTCAGGCGTCGAGA+AGG + chr4_3:44647943-44647962 Msa0642710:CDS 65.0%
GCATATGCCTTGGGCGGTGG+TGG - chr4_3:44649825-44649844 None:intergenic 65.0%
GCGCGCGCGTGCGCGTGTAA+AGG - chr4_3:44647172-44647191 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 44646936 44654431 44646936 ID=Msa0642710;Name=Msa0642710
chr4_3 mRNA 44646936 44654431 44646936 ID=Msa0642710-mRNA-1;Parent=Msa0642710;Name=Msa0642710-mRNA-1;_AED=0.06;_eAED=0.06;_QI=361|0.87|0.88|1|0.75|0.66|9|722|838
chr4_3 exon 44646936 44647110 44646936 ID=Msa0642710-mRNA-1:exon:10213;Parent=Msa0642710-mRNA-1
chr4_3 exon 44647597 44647721 44647597 ID=Msa0642710-mRNA-1:exon:10214;Parent=Msa0642710-mRNA-1
chr4_3 exon 44647824 44648709 44647824 ID=Msa0642710-mRNA-1:exon:10215;Parent=Msa0642710-mRNA-1
chr4_3 exon 44648970 44649088 44648970 ID=Msa0642710-mRNA-1:exon:10216;Parent=Msa0642710-mRNA-1
chr4_3 exon 44651765 44652658 44651765 ID=Msa0642710-mRNA-1:exon:10217;Parent=Msa0642710-mRNA-1
chr4_3 exon 44652747 44653035 44652747 ID=Msa0642710-mRNA-1:exon:10218;Parent=Msa0642710-mRNA-1
chr4_3 exon 44653145 44653310 44653145 ID=Msa0642710-mRNA-1:exon:10219;Parent=Msa0642710-mRNA-1
chr4_3 exon 44653399 44653504 44653399 ID=Msa0642710-mRNA-1:exon:10220;Parent=Msa0642710-mRNA-1
chr4_3 exon 44653592 44654431 44653592 ID=Msa0642710-mRNA-1:exon:10221;Parent=Msa0642710-mRNA-1
chr4_3 five_prime_UTR 44646936 44647110 44646936 ID=Msa0642710-mRNA-1:five_prime_utr;Parent=Msa0642710-mRNA-1
chr4_3 five_prime_UTR 44647597 44647721 44647597 ID=Msa0642710-mRNA-1:five_prime_utr;Parent=Msa0642710-mRNA-1
chr4_3 five_prime_UTR 44647824 44647884 44647824 ID=Msa0642710-mRNA-1:five_prime_utr;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44647885 44648709 44647885 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44648970 44649088 44648970 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44651765 44652658 44651765 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44652747 44653035 44652747 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44653145 44653310 44653145 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44653399 44653504 44653399 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 CDS 44653592 44653709 44653592 ID=Msa0642710-mRNA-1:cds;Parent=Msa0642710-mRNA-1
chr4_3 three_prime_UTR 44653710 44654431 44653710 ID=Msa0642710-mRNA-1:three_prime_utr;Parent=Msa0642710-mRNA-1
Gene Sequence

>Msa0642710

ATGGCGATTGCTGGTTTGCATAGTGTGTCTGTGCTCAACTCGTCGTTTTTGAGGGATTCGCAGTCTCAGGCGTCGAGAAGGAGAGGAGATGGGAGAAGTGGAAGCAATCGGTCGTCTTCGCTTTTGCAAATGTGGCGGGATATTGAGGATGAACATGCGGTGAGTCATGTTCAAGGAAGAGCGGGTGAAGTAGTACTTGAACGAAGGAATAATGGGTTGATTGCGGATGTTTCGTTAGAAGATGCACCTGATAGCCCAGATATAGGAGAGAGGCGTGGTTTGGAAGATGCAGTTTTGGGTGAGAGTGAGTCGGATACATGGTCACAGTCACAAAGTCAGAATGAATCTCATGATGGTCATGAGGATTTGAACAATTCTAGCTGTGAAAACTCTTCTGTTTTCGGAGAAGTTGAAAGGGAAAGAGTGCGGCGAGTTTTCAGGGAATGGATGAATACTGGATCAAACGTTTCCCGAAGAAGTGAAATTCCTAGGGGAGAGTGGCTTGGAGAAACCGAACAGGAAAGGGTGAGAGTTATAAGGGAATGGGTACAAACGAGCAGCCAGCAGAGAAGTGTTTCTTCTGGGGAAAACAGGGAGCAGCCACGTGCTGAAATTGGTACACAAATTGAACGTGTGCGTGATGGATTTGTCGTTAACCACAGTGAGGGACAAAATGAGTATATACGGAGGAGTATGCGTAAATTACGCGGCAGACAGGTTATGCTTGATATGCTTAAGAAGGCTGAGAGGGAAAGGCAGAGAGAAATTCACGAGTTGCTGGACCATCAGGCTGTATCACGTTTTCCCCATCGCAATCGCATTCAGGCATTGCTTAGAGGCAGGTTTTTGAGAAATGACAGATCTGTTGACCATAACAGGTCCACATCTGTAGCAGAAAGTGAATTAGGCTTATTGAGGCAAAGACAAACTGTATCAGGTCTAAGGGAAGGATTCTTCTCCAGAATGGACAGTACCGGTTGCAGCCAAGCAACCAGCAACCTATCTGATACCTCATCAAACATTGATATTGATTTTAATACAAATGAACAAACTGGAGAAAGCAGTTCTTGTATGGTCATTGAACCTACTAACATAAGAGATAATAGGGCTGGGGTATCTGGTGACCACTGTCTACAAGGAATTACATGTGAGAGTTTAGATTGTCAAGAATCTACTGCCCATGTAGAAGGGAATCAGTTGCAGTGCTTGCAAATTGAGTCAGTAGATAGGCAGTCATCATTCAGTGATGGGTGTGAAAGAAGAGATTGCACTGGGCAAAATGTTGATGTGGCGACAATCAGAGATAGAGCTGATGAACTTATCCAACAAAGCTTACAAACTGATGATTCAGAGCATAGTAATAATCAGGTATCCAGTGAGGTACATAATGAGCAATCTGAGCTGGGTGATATAAGTAATGGCGAAAACAATTCATCAAATCAAGGTGATTATACGGAGAGCAATGTTGTTGATGATGTGAATGGATCTGGTGCTCTAGAAGAACAGCTGGAACGAATTGTTGAAAATGAAGGAAGTGGCTGGCATCAGAGTAACACTGAATGGAGAAATAGCACCGATGAAAGTGTGGATGATAATCAGCTCAGAAATACAGCAAATGAGTGGCCTGAAAACAGTTGGGTCAATGAGGATGTAGAAAACCCTCATCGGCAAGAAGCTTCTGAAGTTTGGCAAGAAGATAGTGGCTTCCAAGAGGCCGTGGAAAATTGGTTAGGAGGACCTTCTGACCATGAAACTGCTCCAAGTAGTAGAGTTCATAGTTATTATTTTCCTGATGATGACAATGTATACAATGTTGAACTCAGGGAACTTCATAGTAGGAGACGTGTGTCTAATCTCCTCGGAAGTAGTTTCCGTGCGAGTCTTGACCAGTTGATACAATCATATGTTGAAAGACAAGGTCATGCTAACATGGAGTGGGATCCGGAAGATGCAGCCCCATCTGCTAACCTTGAGCAGCAGAGTCAAGATCAGATTGTTGATCAGGAGGGTACTATTAATAGTCCACTTGACTTGCCCTCTTTGCCTTCACCTCCTACTCCACCTCTTTGGGATCAGCATCCTCATGGTGATAACTGGTCGCACAATGACGTAAATAATCCGCCTCTAGATTTGGAAATTATTAATGACTTGAGACTTGACATGGCTAGATTACAGCAAAGGATGAATACTATGCAGAGGATGCTTGAGGCATGTATGGATATGCAGCTTGAGCTGCAACGCTCGATAAAACAAGAAGTTTCTGCAGCACTAAATCGCTCAGCTGGTTCATCAGGAATACGTGAATGCGATTCACTAGATGACAATTCTAAATGGGAATGTGTGAGAAAAGGACTTTGCTGTATTTGCAGCGAAAGCAATATTGATTCTTTATTGTACAGATGTGGCCATTTGTGCACATGTTCAGGATGTGCCAATGAGTTGCTTCAAAGTAGAAGGAATTGCCCAATGTGTCATGCCCCTGTGTTGGAGGTTATACGTACTTATTCTATACTATAA
Protein sequence

>Msa0642710

MAIAGLHSVSVLNSSFLRDSQSQASRRRGDGRSGSNRSSSLLQMWRDIEDEHAVSHVQGRAGEVVLERRNNGLIADVSLEDAPDSPDIGERRGLEDAVLGESESDTWSQSQSQNESHDGHEDLNNSSCENSSVFGEVERERVRRVFREWMNTGSNVSRRSEIPRGEWLGETEQERVRVIREWVQTSSQQRSVSSGENREQPRAEIGTQIERVRDGFVVNHSEGQNEYIRRSMRKLRGRQVMLDMLKKAERERQREIHELLDHQAVSRFPHRNRIQALLRGRFLRNDRSVDHNRSTSVAESELGLLRQRQTVSGLREGFFSRMDSTGCSQATSNLSDTSSNIDIDFNTNEQTGESSSCMVIEPTNIRDNRAGVSGDHCLQGITCESLDCQESTAHVEGNQLQCLQIESVDRQSSFSDGCERRDCTGQNVDVATIRDRADELIQQSLQTDDSEHSNNQVSSEVHNEQSELGDISNGENNSSNQGDYTESNVVDDVNGSGALEEQLERIVENEGSGWHQSNTEWRNSTDESVDDNQLRNTANEWPENSWVNEDVENPHRQEASEVWQEDSGFQEAVENWLGGPSDHETAPSSRVHSYYFPDDDNVYNVELRELHSRRRVSNLLGSSFRASLDQLIQSYVERQGHANMEWDPEDAAPSANLEQQSQDQIVDQEGTINSPLDLPSLPSPPTPPLWDQHPHGDNWSHNDVNNPPLDLEIINDLRLDMARLQQRMNTMQRMLEACMDMQLELQRSIKQEVSAALNRSAGSSGIRECDSLDDNSKWECVRKGLCCICSESNIDSLLYRCGHLCTCSGCANELLQSRRNCPMCHAPVLEVIRTYSIL*