Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041820 | XP_013450087.1 | 98.758 | 483 | 5 | 1 | 1 | 483 | 1 | 482 | 0.0 | 988 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041820 | sp|Q9LZR3|CSLA9_ARATH | 79.324 | 503 | 99 | 3 | 1 | 502 | 1 | 499 | 0.0 | 854 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041820 | A0A072UE63 | 98.758 | 483 | 5 | 1 | 1 | 483 | 1 | 482 | 0.0 | 988 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018220 | Msa1041820 | 0.858180 | 9.832494e-63 | -8.615850e-47 |
| Msa0033650 | Msa1041820 | 0.802123 | 6.513379e-49 | -8.615850e-47 |
| Msa0052020 | Msa1041820 | 0.846768 | 1.764749e-59 | -8.615850e-47 |
| Msa0052460 | Msa1041820 | 0.841643 | 4.194936e-58 | -8.615850e-47 |
| Msa0097050 | Msa1041820 | 0.856878 | 2.387997e-62 | -8.615850e-47 |
| Msa0642710 | Msa1041820 | 0.800005 | 1.765502e-48 | -8.615850e-47 |
| Msa0691160 | Msa1041820 | 0.801240 | 9.883951e-49 | -8.615850e-47 |
| Msa0722940 | Msa1041820 | 0.814823 | 1.266264e-51 | -8.615850e-47 |
| Msa0744430 | Msa1041820 | 0.816684 | 4.870356e-52 | -8.615850e-47 |
| Msa0782970 | Msa1041820 | 0.806285 | 8.859470e-50 | -8.615850e-47 |
| Msa0792510 | Msa1041820 | 0.809854 | 1.540355e-50 | -8.615850e-47 |
| Msa0825620 | Msa1041820 | 0.810319 | 1.223006e-50 | -8.615850e-47 |
| Msa0142470 | Msa1041820 | 0.816126 | 6.492685e-52 | -8.615850e-47 |
| Msa0168390 | Msa1041820 | 0.810029 | 1.412005e-50 | -8.615850e-47 |
| Msa0169730 | Msa1041820 | 0.804782 | 1.830966e-49 | -8.615850e-47 |
| Msa0207180 | Msa1041820 | 0.809682 | 1.677347e-50 | -8.615850e-47 |
| Msa0219660 | Msa1041820 | 0.803761 | 2.987534e-49 | -8.615850e-47 |
| Msa0233190 | Msa1041820 | 0.807488 | 4.933579e-50 | -8.615850e-47 |
| Msa0371610 | Msa1041820 | 0.814391 | 1.578295e-51 | -8.615850e-47 |
| Msa0382560 | Msa1041820 | 0.804002 | 2.662343e-49 | -8.615850e-47 |
| Msa0420070 | Msa1041820 | 0.808444 | 3.087969e-50 | -8.615850e-47 |
| Msa0465860 | Msa1041820 | 0.802056 | 6.722783e-49 | -8.615850e-47 |
| Msa1009000 | Msa1041820 | 0.812076 | 5.085705e-51 | -8.615850e-47 |
| Msa1014270 | Msa1041820 | 0.809957 | 1.463440e-50 | -8.615850e-47 |
| Msa1018720 | Msa1041820 | 0.831048 | 2.081934e-55 | -8.615850e-47 |
| Msa1041820 | Msa1055260 | 0.809984 | 1.444035e-50 | -8.615850e-47 |
| Msa1041820 | Msa1055280 | 0.805011 | 1.639706e-49 | -8.615850e-47 |
| Msa1041820 | Msa1099030 | 0.811594 | 6.474340e-51 | -8.615850e-47 |
| Msa1041820 | Msa1107970 | 0.801550 | 8.539166e-49 | -8.615850e-47 |
| Msa1041820 | Msa1125040 | 0.918605 | 1.267259e-86 | -8.615850e-47 |
| Msa1041820 | Msa1143620 | 0.815650 | 8.291772e-52 | -8.615850e-47 |
| Msa1041820 | Msa1151960 | 0.808745 | 2.662616e-50 | -8.615850e-47 |
| Msa1041820 | Msa1167400 | 0.949484 | 1.160391e-107 | -8.615850e-47 |
| Msa1041820 | Msa1201990 | 0.826401 | 2.767995e-54 | -8.615850e-47 |
| Msa1041820 | Msa1221260 | 0.801855 | 7.392695e-49 | -8.615850e-47 |
| Msa1041820 | Msa1232860 | 0.811237 | 7.738985e-51 | -8.615850e-47 |
| Msa1041820 | Msa1254770 | 0.818571 | 1.828960e-52 | -8.615850e-47 |
| Msa1041820 | Msa1254800 | 0.816852 | 4.467004e-52 | -8.615850e-47 |
| Msa1041820 | Msa1295010 | 0.810749 | 9.874921e-51 | -8.615850e-47 |
| Msa1041820 | Msa1329990 | 0.814973 | 1.172918e-51 | -8.615850e-47 |
| Msa1041820 | Msa1373950 | 0.812240 | 4.683213e-51 | -8.615850e-47 |
| Msa1041820 | Msa1423080 | 0.930864 | 8.784598e-94 | -8.615850e-47 |
| Msa1041820 | Msa1429830 | 0.812909 | 3.343177e-51 | -8.615850e-47 |
| Msa1041820 | Msa1435670 | 0.812495 | 4.120191e-51 | -8.615850e-47 |
| Msa1041820 | Msa1465900 | 0.806431 | 8.254347e-50 | -8.615850e-47 |
| Msa0260960 | Msa1041820 | 0.805490 | 1.301736e-49 | -8.615850e-47 |
| Msa0260970 | Msa1041820 | 0.808526 | 2.965953e-50 | -8.615850e-47 |
| Msa0290950 | Msa1041820 | 0.821577 | 3.750052e-53 | -8.615850e-47 |
| Msa0290970 | Msa1041820 | 0.812616 | 3.875851e-51 | -8.615850e-47 |
| Msa0304990 | Msa1041820 | 0.801208 | 1.003391e-48 | -8.615850e-47 |
| Msa0315480 | Msa1041820 | 0.815266 | 1.009525e-51 | -8.615850e-47 |
| Msa0510230 | Msa1041820 | 0.800512 | 1.392180e-48 | -8.615850e-47 |
| Msa0569020 | Msa1041820 | 0.812774 | 3.579927e-51 | -8.615850e-47 |
| Msa0575250 | Msa1041820 | 0.825884 | 3.674122e-54 | -8.615850e-47 |
| Msa0581340 | Msa1041820 | 0.803346 | 3.642165e-49 | -8.615850e-47 |
| Msa0847390 | Msa1041820 | 0.807733 | 4.375250e-50 | -8.615850e-47 |
| Msa0880080 | Msa1041820 | 0.930975 | 7.473412e-94 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041820 | MtrunA17_Chr7g0265711 | 98.758 | 483 | 5 | 1 | 1 | 483 | 1 | 482 | 0.0 | 988 |
| Msa1041820 | MtrunA17_Chr1g0179441 | 85.501 | 469 | 68 | 0 | 12 | 480 | 2 | 470 | 0.0 | 871 |
| Msa1041820 | MtrunA17_Chr1g0179381 | 77.684 | 475 | 105 | 1 | 13 | 487 | 3 | 476 | 0.0 | 801 |
| Msa1041820 | MtrunA17_Chr1g0179421 | 76.582 | 474 | 111 | 0 | 13 | 486 | 3 | 476 | 0.0 | 800 |
| Msa1041820 | MtrunA17_Chr1g0198111 | 76.923 | 481 | 106 | 2 | 1 | 480 | 1 | 477 | 0.0 | 777 |
| Msa1041820 | MtrunA17_Chr4g0027221 | 71.460 | 452 | 128 | 1 | 10 | 461 | 10 | 460 | 0.0 | 726 |
| Msa1041820 | MtrunA17_Chr7g0264621 | 68.062 | 454 | 142 | 2 | 29 | 480 | 25 | 477 | 0.0 | 679 |
| Msa1041820 | MtrunA17_Chr1g0179391 | 81.711 | 339 | 62 | 0 | 142 | 480 | 1 | 339 | 0.0 | 612 |
| Msa1041820 | MtrunA17_Chr6g0451381 | 45.595 | 454 | 241 | 2 | 27 | 480 | 138 | 585 | 6.93e-144 | 429 |
| Msa1041820 | MtrunA17_Chr4g0000581 | 47.368 | 437 | 227 | 2 | 24 | 460 | 166 | 599 | 3.75e-141 | 423 |
| Msa1041820 | MtrunA17_Chr3g0135191 | 47.332 | 431 | 222 | 3 | 29 | 458 | 171 | 597 | 1.02e-140 | 422 |
| Msa1041820 | MtrunA17_Chr3g0139081 | 48.046 | 435 | 222 | 3 | 25 | 458 | 151 | 582 | 1.36e-140 | 421 |
| Msa1041820 | MtrunA17_Chr8g0339101 | 46.172 | 431 | 226 | 3 | 29 | 458 | 175 | 600 | 1.05e-126 | 386 |
| Msa1041820 | MtrunA17_Chr1g0179401 | 67.939 | 131 | 42 | 0 | 13 | 143 | 3 | 133 | 1.96e-58 | 191 |
| Msa1041820 | MtrunA17_Chr4g0064791 | 44.361 | 133 | 67 | 2 | 74 | 199 | 68 | 200 | 1.55e-25 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1041820 | AT5G03760.1 | 79.324 | 503 | 99 | 3 | 1 | 502 | 1 | 499 | 0.0 | 854 |
| Msa1041820 | AT5G22740.1 | 72.614 | 482 | 130 | 2 | 1 | 480 | 1 | 482 | 0.0 | 773 |
| Msa1041820 | AT1G23480.1 | 69.677 | 465 | 140 | 1 | 17 | 480 | 39 | 503 | 0.0 | 707 |
| Msa1041820 | AT1G23480.2 | 69.677 | 465 | 140 | 1 | 17 | 480 | 39 | 503 | 0.0 | 707 |
| Msa1041820 | AT2G35650.1 | 66.460 | 483 | 159 | 1 | 5 | 487 | 27 | 506 | 0.0 | 702 |
| Msa1041820 | AT1G23480.3 | 72.854 | 431 | 116 | 1 | 51 | 480 | 1 | 431 | 0.0 | 685 |
| Msa1041820 | AT4G13410.1 | 63.853 | 462 | 167 | 0 | 13 | 474 | 27 | 488 | 0.0 | 685 |
| Msa1041820 | AT2G35650.4 | 69.565 | 437 | 130 | 1 | 51 | 487 | 1 | 434 | 0.0 | 669 |
| Msa1041820 | AT2G35650.2 | 69.565 | 437 | 130 | 1 | 51 | 487 | 1 | 434 | 0.0 | 669 |
| Msa1041820 | AT1G24070.1 | 67.972 | 434 | 139 | 0 | 31 | 464 | 56 | 489 | 0.0 | 669 |
| Msa1041820 | AT5G16190.3 | 67.040 | 446 | 146 | 1 | 29 | 474 | 6 | 450 | 0.0 | 664 |
| Msa1041820 | AT5G16190.2 | 66.592 | 449 | 149 | 1 | 26 | 474 | 3 | 450 | 0.0 | 663 |
| Msa1041820 | AT5G16190.4 | 62.422 | 479 | 146 | 2 | 29 | 474 | 6 | 483 | 0.0 | 648 |
| Msa1041820 | AT3G56000.1 | 63.496 | 452 | 158 | 5 | 16 | 460 | 7 | 458 | 0.0 | 619 |
| Msa1041820 | AT5G16190.1 | 70.000 | 390 | 116 | 1 | 85 | 474 | 1 | 389 | 0.0 | 607 |
| Msa1041820 | AT4G16590.1 | 57.391 | 460 | 163 | 1 | 13 | 472 | 40 | 466 | 0.0 | 589 |
| Msa1041820 | AT1G23480.4 | 73.373 | 338 | 90 | 0 | 143 | 480 | 21 | 358 | 0.0 | 548 |
| Msa1041820 | AT2G35650.3 | 69.054 | 349 | 104 | 2 | 140 | 487 | 3 | 348 | 0.0 | 530 |
| Msa1041820 | AT4G13410.2 | 62.842 | 366 | 128 | 2 | 13 | 377 | 27 | 385 | 0.0 | 520 |
| Msa1041820 | AT4G13410.3 | 66.055 | 327 | 111 | 0 | 148 | 474 | 1 | 327 | 6.44e-180 | 511 |
| Msa1041820 | AT1G24070.2 | 61.979 | 384 | 136 | 4 | 1 | 377 | 22 | 402 | 1.77e-176 | 503 |
| Msa1041820 | AT4G31590.1 | 49.652 | 431 | 213 | 3 | 29 | 458 | 160 | 587 | 1.64e-146 | 437 |
| Msa1041820 | AT3G28180.1 | 47.669 | 472 | 234 | 6 | 34 | 505 | 145 | 603 | 2.89e-144 | 431 |
| Msa1041820 | AT2G24630.1 | 48.268 | 433 | 216 | 3 | 29 | 458 | 160 | 587 | 1.10e-142 | 427 |
| Msa1041820 | AT2G24630.2 | 48.268 | 433 | 216 | 3 | 29 | 458 | 160 | 587 | 1.10e-142 | 427 |
| Msa1041820 | AT3G07330.1 | 45.767 | 437 | 232 | 3 | 29 | 463 | 153 | 586 | 3.11e-137 | 413 |
| Msa1041820 | AT3G07330.2 | 45.767 | 437 | 232 | 3 | 29 | 463 | 153 | 586 | 3.11e-137 | 413 |
| Msa1041820 | AT4G07960.1 | 46.437 | 435 | 221 | 4 | 29 | 458 | 174 | 601 | 1.36e-128 | 391 |
| Msa1041820 | AT4G07960.2 | 46.437 | 435 | 221 | 4 | 29 | 458 | 174 | 601 | 1.36e-128 | 391 |
Find 142 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTTGCTTGCCCATCTT+TGG | 0.176325 | 7_1:-79467086 | None:intergenic |
| TTGATTCCTTTAAACTCTTT+TGG | 0.188769 | 7_1:+79466125 | Msa1041820:five_prime_UTR |
| CACTCCATTTACTCGTCTTT+TGG | 0.191826 | 7_1:+79470933 | Msa1041820:CDS |
| ATTACTCTTGTGAAGCTATT+TGG | 0.195420 | 7_1:+79466449 | Msa1041820:CDS |
| ATTCAAGCTCGCTGGAAATT+TGG | 0.211852 | 7_1:+79467297 | Msa1041820:CDS |
| ATGGTGCATAATCCTGAAAT+TGG | 0.230250 | 7_1:+79467270 | Msa1041820:CDS |
| GTTCATTGAGAGGGTTTATA+TGG | 0.236886 | 7_1:+79466418 | Msa1041820:CDS |
| TCTTCCACTTATGCCTTCTT+TGG | 0.238978 | 7_1:+79469709 | Msa1041820:CDS |
| TCAGGATTATGCACCATAAA+TGG | 0.242025 | 7_1:-79467264 | None:intergenic |
| ATATAAACAGCTCCCCATTT+TGG | 0.249304 | 7_1:-79470635 | None:intergenic |
| CCATGCAGATTTCTTTGATT+TGG | 0.256976 | 7_1:+79466318 | Msa1041820:CDS |
| CTTCTTGTTCCACAGTAAAA+TGG | 0.257586 | 7_1:-79469681 | None:intergenic |
| GTGGCGTACCGTGCCATTTA+TGG | 0.258207 | 7_1:+79467251 | Msa1041820:CDS |
| ATTAAAGATGATATTGAGTT+AGG | 0.273179 | 7_1:+79466506 | Msa1041820:CDS |
| CTTCAACTTAGTACTATAAA+AGG | 0.278579 | 7_1:+79465646 | None:intergenic |
| AACACTGATATTCTTAATAA+TGG | 0.287208 | 7_1:-79466368 | None:intergenic |
| ATAGATCCAAAAGAGTTTAA+AGG | 0.287891 | 7_1:-79466131 | None:intergenic |
| GCTTGAATAAGCCCAATTTC+AGG | 0.288015 | 7_1:-79467282 | None:intergenic |
| CTGCATGGTTATGTCATCTT+TGG | 0.289883 | 7_1:-79466303 | None:intergenic |
| GAGCTGCATGTGGTCTTTCA+TGG | 0.298061 | 7_1:+79466677 | Msa1041820:CDS |
| AGAAGAGATAAGAGGGGAAA+TGG | 0.299948 | 7_1:-79465754 | None:intergenic |
| CTGAAGTTGCAGTCCCAAAA+TGG | 0.308721 | 7_1:+79470621 | Msa1041820:CDS |
| AAGAATCACCAGGTCCTTCT+AGG | 0.309328 | 7_1:-79471571 | None:intergenic |
| GAATCCAAAAGACGAGTAAA+TGG | 0.317482 | 7_1:-79470937 | None:intergenic |
| GGAATGTACCTCTTCTTTAT+CGG | 0.318375 | 7_1:+79471438 | Msa1041820:CDS |
| GCCTTCTTCATCATGGCATT+TGG | 0.329707 | 7_1:+79471522 | Msa1041820:CDS |
| TGAATATAAAGTATGAAGTT+AGG | 0.333573 | 7_1:+79467109 | Msa1041820:CDS |
| AGAGCAAAGGCAACTGTTAT+TGG | 0.333948 | 7_1:+79470986 | Msa1041820:CDS |
| TGTTCTACCTGCAACAGTTT+TGG | 0.346292 | 7_1:+79470595 | Msa1041820:CDS |
| AAATAGGGACTGCGGGAGTA+TGG | 0.352048 | 7_1:+79469832 | Msa1041820:intron |
| GTCTTTCATGGCCTTCTGAT+AGG | 0.353195 | 7_1:+79466689 | Msa1041820:CDS |
| AACTCAATATCATCTTTAAT+CGG | 0.371739 | 7_1:-79466503 | None:intergenic |
| CACTCAAGAAGCCTCGATTC+AGG | 0.375542 | 7_1:+79471092 | Msa1041820:CDS |
| TAGGTATGCTTCATCTGAAA+TGG | 0.376678 | 7_1:-79465935 | None:intergenic |
| GAAGAGATAAGAGGGGAAAT+GGG | 0.380252 | 7_1:-79465753 | None:intergenic |
| GATTGAAGACAGGTATAAAT+TGG | 0.381567 | 7_1:+79471114 | Msa1041820:CDS |
| GGCTGCTACGATGTCATGTT+TGG | 0.384233 | 7_1:+79471459 | Msa1041820:CDS |
| ATCAACTTTGGTAAAGAAAC+AGG | 0.387234 | 7_1:-79466107 | None:intergenic |
| TTTACAGTTTCTTCTTTGTT+CGG | 0.390215 | 7_1:+79470531 | Msa1041820:CDS |
| CTTAATAATGGAACAATCAA+TGG | 0.390254 | 7_1:-79466356 | None:intergenic |
| TGAATTGCCAAGTACTTTCA+AGG | 0.396142 | 7_1:+79470317 | Msa1041820:CDS |
| ATCATGGCATTTGGATATGT+TGG | 0.396225 | 7_1:+79471531 | Msa1041820:CDS |
| ATTTAGAAGAAGAGATAAGA+GGG | 0.399486 | 7_1:-79465761 | None:intergenic |
| TTGGTGGTTACCTTGATTGT+TGG | 0.403305 | 7_1:-79466745 | None:intergenic |
| TTGGCTCCTTGTAATGCAAA+AGG | 0.408052 | 7_1:-79466284 | None:intergenic |
| TAGGTTTATCAATTGTCAAT+TGG | 0.410462 | 7_1:+79466655 | Msa1041820:intron |
| TCAGGTACCAAAACTGTTGC+AGG | 0.411860 | 7_1:-79470602 | None:intergenic |
| TTTCGTTCCCAACTCCTAGA+AGG | 0.414328 | 7_1:+79471557 | Msa1041820:CDS |
| TTATTTAGGAGTTCTCTATA+TGG | 0.415455 | 7_1:-79465704 | None:intergenic |
| AGGGAACTCTTGTTATCCTA+TGG | 0.425012 | 7_1:+79466526 | Msa1041820:CDS |
| GAAGTTAGGGACAATAGAAA+TGG | 0.426618 | 7_1:+79467123 | Msa1041820:CDS |
| TGGTGGTTACCTTGATTGTT+GGG | 0.427397 | 7_1:-79466744 | None:intergenic |
| TGAAGTTGCAGTCCCAAAAT+GGG | 0.429590 | 7_1:+79470622 | Msa1041820:CDS |
| GGCAACTGTTATTGGTCTAC+TGG | 0.431153 | 7_1:+79470994 | Msa1041820:CDS |
| TGGTGCATAATCCTGAAATT+GGG | 0.431589 | 7_1:+79467271 | Msa1041820:CDS |
| TAGGACCACAGTTGAAGATA+TGG | 0.439206 | 7_1:+79469893 | Msa1041820:CDS |
| ACCAGGTCCTTCTAGGAGTT+GGG | 0.450800 | 7_1:-79471564 | None:intergenic |
| CACCAGGTCCTTCTAGGAGT+TGG | 0.452352 | 7_1:-79471565 | None:intergenic |
| AATTTAGAAGAAGAGATAAG+AGG | 0.453589 | 7_1:-79465762 | None:intergenic |
| TGCGGGAGTATGGAGAATTT+CGG | 0.455041 | 7_1:+79469842 | Msa1041820:CDS |
| TTCATTGAGAGGGTTTATAT+GGG | 0.458905 | 7_1:+79466419 | Msa1041820:CDS |
| TTTACTGTGGAACAAGAAGT+TGG | 0.466141 | 7_1:+79469685 | Msa1041820:CDS |
| ACGGTACGCCACAAGAAATC+AGG | 0.467117 | 7_1:-79467240 | None:intergenic |
| GAATATAAAGTATGAAGTTA+GGG | 0.471641 | 7_1:+79467110 | Msa1041820:CDS |
| CAACAGCATCGTTGGTCTTG+TGG | 0.474525 | 7_1:+79470351 | Msa1041820:CDS |
| TTAAAGATGATATTGAGTTA+GGG | 0.475445 | 7_1:+79466507 | Msa1041820:CDS |
| CGGTAGGCCTTGAAAGTACT+TGG | 0.476789 | 7_1:-79470324 | None:intergenic |
| ATCACTCTTCTCAATGCAGT+TGG | 0.478452 | 7_1:+79470668 | Msa1041820:CDS |
| CGAAAGAGAAGAATGAGAAG+AGG | 0.480212 | 7_1:-79466206 | None:intergenic |
| TGCAACTAGAATGCCAAAGA+TGG | 0.493450 | 7_1:+79467073 | Msa1041820:CDS |
| TTTACCGTTGAAGCCAAAGA+AGG | 0.495185 | 7_1:-79469722 | None:intergenic |
| TTACTGTGGAACAAGAAGTT+GGG | 0.495324 | 7_1:+79469686 | Msa1041820:CDS |
| AAAGCAGGTGCTTTAAAAGA+AGG | 0.496244 | 7_1:+79467150 | Msa1041820:CDS |
| TGATGAAGAAGGCGATTGCT+TGG | 0.497071 | 7_1:-79471512 | None:intergenic |
| GAGTTTAAAGGAATCAACTT+TGG | 0.502888 | 7_1:-79466119 | None:intergenic |
| TATGCCTTCTTTGGCTTCAA+CGG | 0.507643 | 7_1:+79469718 | Msa1041820:CDS |
| TACCTTGATTGTTGGGTCAG+TGG | 0.509231 | 7_1:-79466737 | None:intergenic |
| TAAAGAGAAAGATGAAGAAG+TGG | 0.512666 | 7_1:-79471488 | None:intergenic |
| CGCTGAATGAGGCTGGTGGA+TGG | 0.512737 | 7_1:+79469865 | Msa1041820:CDS |
| TGGCTCCTTGTAATGCAAAA+GGG | 0.513412 | 7_1:-79466283 | None:intergenic |
| GAGAATTTCGGCGCTGAATG+AGG | 0.515567 | 7_1:+79469854 | Msa1041820:CDS |
| CGCCACAAGAAATCAGGCTC+TGG | 0.518747 | 7_1:-79467234 | None:intergenic |
| AACCAGAGCCTGATTTCTTG+TGG | 0.520038 | 7_1:+79467232 | Msa1041820:CDS |
| TGGATTGTCACTGAGAAACT+TGG | 0.522817 | 7_1:+79471037 | Msa1041820:CDS |
| AGGCTAGTCGAGTGAATGAA+TGG | 0.525944 | 7_1:+79471017 | Msa1041820:CDS |
| TTGGGCTTATTCAAGCTCGC+TGG | 0.526159 | 7_1:+79467289 | Msa1041820:CDS |
| ATTTCGGCGCTGAATGAGGC+TGG | 0.527027 | 7_1:+79469858 | Msa1041820:CDS |
| CTCGATTCAGGATTGAAGAC+AGG | 0.527229 | 7_1:+79471104 | Msa1041820:CDS |
| CTTGGAGATTATTCAAAACA+AGG | 0.528998 | 7_1:+79470401 | Msa1041820:CDS |
| CTCCACTGACCCAACAATCA+AGG | 0.532495 | 7_1:+79466735 | Msa1041820:CDS |
| GAAAGAGAAGAATGAGAAGA+GGG | 0.537970 | 7_1:-79466205 | None:intergenic |
| TGAACTAAAATAGGGACTGC+GGG | 0.541429 | 7_1:+79469825 | Msa1041820:intron |
| CACAGTTGAAGATATGGACT+TGG | 0.542677 | 7_1:+79469899 | Msa1041820:CDS |
| AGCAATCGCCTTCTTCATCA+TGG | 0.549164 | 7_1:+79471515 | Msa1041820:CDS |
| TCCAAATGCCATGATGAAGA+AGG | 0.549329 | 7_1:-79471523 | None:intergenic |
| AGGCTGGTGGATGGAAGGAT+AGG | 0.553645 | 7_1:+79469874 | Msa1041820:CDS |
| GGTATTTGAACAAGAACCAT+AGG | 0.554560 | 7_1:-79466542 | None:intergenic |
| ACCTCTCTTTCATTGTACAT+AGG | 0.555219 | 7_1:-79466563 | None:intergenic |
| AATAGAAATGGATACAAAGC+AGG | 0.560746 | 7_1:+79467135 | Msa1041820:CDS |
| TTGAGAAGAGTGATAACTGA+AGG | 0.561912 | 7_1:-79470659 | None:intergenic |
| CTGAAATGGAAATATTAACC+TGG | 0.561965 | 7_1:-79465921 | None:intergenic |
| GAAGCCAAAGAAGGCATAAG+TGG | 0.564580 | 7_1:-79469713 | None:intergenic |
| CTTATACTTGTCAAACCTGA+AGG | 0.564813 | 7_1:+79469953 | Msa1041820:CDS |
| CACTTGTTAGAACTCGGTGT+TGG | 0.567326 | 7_1:+79471417 | Msa1041820:intron |
| GAAACTTGGAGATGCTCTCA+AGG | 0.573750 | 7_1:+79471051 | Msa1041820:CDS |
| GATGCTCTCAAGGCTAAAGC+AGG | 0.575489 | 7_1:+79471061 | Msa1041820:CDS |
| GCAACTAGAATGCCAAAGAT+GGG | 0.576238 | 7_1:+79467074 | Msa1041820:CDS |
| ACAAGTCTAGTTCTGTGGCC+AGG | 0.577797 | 7_1:+79465903 | Msa1041820:five_prime_UTR |
| ACCGTTACCAACAGCATCGT+TGG | 0.579249 | 7_1:+79470343 | Msa1041820:CDS |
| TGCCAAAGATGGGCAAGCAA+AGG | 0.581743 | 7_1:+79467084 | Msa1041820:CDS |
| GGTGATGATGTTCATTGAGA+GGG | 0.582194 | 7_1:+79466409 | Msa1041820:CDS |
| GCTGTTAGAGCTAGTCTCAA+AGG | 0.586698 | 7_1:+79469921 | Msa1041820:CDS |
| ATAACAAAAGAAAATGTGAA+AGG | 0.592681 | 7_1:-79465796 | None:intergenic |
| ACCAACGATGCTGTTGGTAA+CGG | 0.592939 | 7_1:-79470344 | None:intergenic |
| TTAGAGCTAGTCTCAAAGGA+TGG | 0.596188 | 7_1:+79469925 | Msa1041820:CDS |
| CATTGCAGAAAGTGTCCTTG+TGG | 0.596489 | 7_1:+79470492 | Msa1041820:intron |
| TTTAGAAGAAGAGATAAGAG+GGG | 0.604532 | 7_1:-79465760 | None:intergenic |
| CGGTGATGATGTTCATTGAG+AGG | 0.607961 | 7_1:+79466408 | Msa1041820:CDS |
| ACCTATGTACAATGAAAGAG+AGG | 0.612832 | 7_1:+79466562 | Msa1041820:CDS |
| TGTATAATGATCCTATCAGA+AGG | 0.615758 | 7_1:-79466700 | None:intergenic |
| GAATGAGGCTGGTGGATGGA+AGG | 0.617181 | 7_1:+79469869 | Msa1041820:CDS |
| TCCACACAAGTCTAGTTCTG+TGG | 0.619719 | 7_1:+79465898 | Msa1041820:five_prime_UTR |
| CGTAGCAGCCGATAAAGAAG+AGG | 0.623124 | 7_1:-79471446 | None:intergenic |
| CAAGTCCATATCTTCAACTG+TGG | 0.623849 | 7_1:-79469898 | None:intergenic |
| GAAGACAAATATGTGAACAA+TGG | 0.624585 | 7_1:-79466170 | None:intergenic |
| CACAAGACCAACGATGCTGT+TGG | 0.629785 | 7_1:-79470350 | None:intergenic |
| AACTGTTATTGGTCTACTGG+AGG | 0.630777 | 7_1:+79470997 | Msa1041820:CDS |
| TCCCAACTCCTAGAAGGACC+TGG | 0.631690 | 7_1:+79471563 | Msa1041820:CDS |
| GCCACAGAACTAGACTTGTG+TGG | 0.636428 | 7_1:-79465899 | None:intergenic |
| TGAGAAGAGTGATAACTGAA+GGG | 0.641298 | 7_1:-79470658 | None:intergenic |
| CTGAACTAAAATAGGGACTG+CGG | 0.641588 | 7_1:+79469824 | Msa1041820:intron |
| CCAAATCAAAGAAATCTGCA+TGG | 0.643178 | 7_1:-79466318 | None:intergenic |
| TACATGTATCTTCTTCCACA+AGG | 0.650689 | 7_1:-79470507 | None:intergenic |
| TCAATGCAGTTGGAACTCCA+AGG | 0.651716 | 7_1:+79470678 | Msa1041820:CDS |
| TATGTCTCTACATAGAGCAA+AGG | 0.652156 | 7_1:+79470973 | Msa1041820:CDS |
| GAAGTTGCAGTCCCAAAATG+GGG | 0.657522 | 7_1:+79470623 | Msa1041820:CDS |
| TTGCTGATTGAAGAATCACC+AGG | 0.661147 | 7_1:-79471581 | None:intergenic |
| TTGTCAATTGGAGCTGCATG+TGG | 0.668046 | 7_1:+79466667 | Msa1041820:CDS |
| TCGGCGCTGAATGAGGCTGG+TGG | 0.670749 | 7_1:+79469861 | Msa1041820:CDS |
| CTGTCTTCAATCCTGAATCG+AGG | 0.672002 | 7_1:-79471103 | None:intergenic |
| ACGATGCTGTTGGTAACGGT+AGG | 0.676078 | 7_1:-79470340 | None:intergenic |
| ATTATGCACCATAAATGGCA+CGG | 0.678926 | 7_1:-79467259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAATAAAATTAATTTGG+TGG | - | chr7_1:79466764-79466783 | None:intergenic | 10.0% |
| !! | TGGATTTAATAAAATTAATT+TGG | - | chr7_1:79466767-79466786 | None:intergenic | 10.0% |
| !! | TTAAATTAAGATTCTTAATA+TGG | + | chr7_1:79467393-79467412 | Msa1041820:intron | 10.0% |
| !!! | AATGTAAAGATTAATATTTT+TGG | + | chr7_1:79467727-79467746 | Msa1041820:intron | 10.0% |
| !! | TTTAATATCAATGTAATTTA+TGG | + | chr7_1:79467793-79467812 | Msa1041820:intron | 10.0% |
| !! | GGTTTATTATTAAAAATTAT+TGG | + | chr7_1:79467916-79467935 | Msa1041820:intron | 10.0% |
| !!! | CTATAAAATATATATTTTTG+CGG | + | chr7_1:79468284-79468303 | Msa1041820:intron | 10.0% |
| !!! | ATTATTTTATATCATATCAT+GGG | - | chr7_1:79468366-79468385 | None:intergenic | 10.0% |
| !!! | TATTATTTTATATCATATCA+TGG | - | chr7_1:79468367-79468386 | None:intergenic | 10.0% |
| !! | GATATGATATAAAATAATAA+TGG | + | chr7_1:79468368-79468387 | Msa1041820:intron | 10.0% |
| !!! | AAAAATTAAATTTTATTTCG+TGG | + | chr7_1:79468759-79468778 | Msa1041820:intron | 10.0% |
| !! | GATTTAATTATTACAATTAT+AGG | + | chr7_1:79468799-79468818 | Msa1041820:intron | 10.0% |
| !! | TAACTATTAATTCAATAATT+TGG | + | chr7_1:79468861-79468880 | Msa1041820:intron | 10.0% |
| !! | TACTCATATATAATTAAATT+AGG | - | chr7_1:79468929-79468948 | None:intergenic | 10.0% |
| !! | AAATAAATCAACAATAATAA+TGG | - | chr7_1:79469071-79469090 | None:intergenic | 10.0% |
| !!! | TATTATTGTTGATTTATTTA+TGG | + | chr7_1:79469072-79469091 | Msa1041820:intron | 10.0% |
| !!! | ATTTTATTTTTATTGTAGAA+AGG | - | chr7_1:79469760-79469779 | None:intergenic | 10.0% |
| !! | TAACAAATAAATATATGAAA+TGG | + | chr7_1:79470231-79470250 | Msa1041820:intron | 10.0% |
| !!! | GTTTTTTATTGTGTTTATTT+AGG | - | chr7_1:79465721-79465740 | None:intergenic | 15.0% |
| !!! | AGATGAATGTTTTTTTTAAT+CGG | + | chr7_1:79467684-79467703 | Msa1041820:intron | 15.0% |
| !!! | AAAGATTAATATTTTTGGTT+AGG | + | chr7_1:79467732-79467751 | Msa1041820:intron | 15.0% |
| !!! | TAATTTTTAATAATAAACCG+AGG | - | chr7_1:79467915-79467934 | None:intergenic | 15.0% |
| !!! | CGCAAAAATATATATTTTAT+AGG | - | chr7_1:79468286-79468305 | None:intergenic | 15.0% |
| !! | ATAACAAAAGAAAATGTGAA+AGG | - | chr7_1:79465799-79465818 | None:intergenic | 20.0% |
| !!! | GTTTGTTAATTTTAAGATCT+AGG | + | chr7_1:79465983-79466002 | Msa1041820:five_prime_UTR | 20.0% |
| !! | TCAAAAACTACTATTTCAAA+TGG | + | chr7_1:79466235-79466254 | Msa1041820:exon | 20.0% |
| !! | AACACTGATATTCTTAATAA+TGG | - | chr7_1:79466371-79466390 | None:intergenic | 20.0% |
| !! | AACTCAATATCATCTTTAAT+CGG | - | chr7_1:79466506-79466525 | None:intergenic | 20.0% |
| !! | ATTAAAGATGATATTGAGTT+AGG | + | chr7_1:79466506-79466525 | Msa1041820:CDS | 20.0% |
| !! | TTAAAGATGATATTGAGTTA+GGG | + | chr7_1:79466507-79466526 | Msa1041820:CDS | 20.0% |
| !!! | TTGTAAACGACTATAATTTT+TGG | - | chr7_1:79466829-79466848 | None:intergenic | 20.0% |
| !!! | GATGATTAACATTGATTTTA+TGG | + | chr7_1:79467025-79467044 | Msa1041820:intron | 20.0% |
| !! | ATGGTAACAAAAAAAAATGT+AGG | + | chr7_1:79467044-79467063 | Msa1041820:intron | 20.0% |
| !! | TGAATATAAAGTATGAAGTT+AGG | + | chr7_1:79467109-79467128 | Msa1041820:CDS | 20.0% |
| !! | GAATATAAAGTATGAAGTTA+GGG | + | chr7_1:79467110-79467129 | Msa1041820:CDS | 20.0% |
| !!! | ATTAATATTTTTGGTTAGGT+GGG | + | chr7_1:79467736-79467755 | Msa1041820:intron | 20.0% |
| !!! | ATTCTCTGTAATGATTTTTT+TGG | - | chr7_1:79468137-79468156 | None:intergenic | 20.0% |
| !! | TATAAATGAATCATTAGCTA+GGG | - | chr7_1:79468412-79468431 | None:intergenic | 20.0% |
| !! | TTTATAGCATAATATGAGTT+TGG | + | chr7_1:79468426-79468445 | Msa1041820:intron | 20.0% |
| !! | ATTAAATTAGGCAAATTCTA+TGG | - | chr7_1:79468917-79468936 | None:intergenic | 20.0% |
| !! | AATTGCATATATACTCATAT+AGG | - | chr7_1:79468990-79469009 | None:intergenic | 20.0% |
| !! | AACATTATACAGCATAAATT+TGG | - | chr7_1:79469013-79469032 | None:intergenic | 20.0% |
| !!! | TAATAATTGAAGATTTTGTG+CGG | + | chr7_1:79469039-79469058 | Msa1041820:intron | 20.0% |
| !! | AAATCAACAATAATAATGGT+TGG | - | chr7_1:79469067-79469086 | None:intergenic | 20.0% |
| !!! | TATTGTTGATTTATTTATGG+AGG | + | chr7_1:79469075-79469094 | Msa1041820:intron | 20.0% |
| !!! | ATTGTTGATTTATTTATGGA+GGG | + | chr7_1:79469076-79469095 | Msa1041820:intron | 20.0% |
| !! | TTAAAAATAAATGCATCTGT+CGG | - | chr7_1:79469492-79469511 | None:intergenic | 20.0% |
| !!! | TTATGTTTTTTCAGTGAATT+CGG | + | chr7_1:79469615-79469634 | Msa1041820:intron | 20.0% |
| !!! | GTTTGAAATAATTATGAAAG+TGG | - | chr7_1:79469980-79469999 | None:intergenic | 20.0% |
| !! | CAAACTCAATAATTTAATCT+TGG | + | chr7_1:79469995-79470014 | Msa1041820:intron | 20.0% |
| !! | GAATATTTATCATGTTTAAG+TGG | + | chr7_1:79470134-79470153 | Msa1041820:intron | 20.0% |
| !! | ATTGAGTGTATATTATCAAT+TGG | + | chr7_1:79470254-79470273 | Msa1041820:intron | 20.0% |
| !! | TGTAGATTGAAAATAATTCA+AGG | - | chr7_1:79470439-79470458 | None:intergenic | 20.0% |
| !! | GCTTATGTATTTGATTAAAA+AGG | - | chr7_1:79470834-79470853 | None:intergenic | 20.0% |
| !! | CTTGTATTTAAATGGAAATT+TGG | - | chr7_1:79470856-79470875 | None:intergenic | 20.0% |
| !! | ACAAGTTTCTTGTATTTAAA+TGG | - | chr7_1:79470864-79470883 | None:intergenic | 20.0% |
| !!! | AAAAATTGTGATCTCAATTT+TGG | + | chr7_1:79471266-79471285 | Msa1041820:intron | 20.0% |
| ! | TTATTTAGGAGTTCTCTATA+TGG | - | chr7_1:79465707-79465726 | None:intergenic | 25.0% |
| ! | ATTTAGAAGAAGAGATAAGA+GGG | - | chr7_1:79465764-79465783 | None:intergenic | 25.0% |
| ! | AATTTAGAAGAAGAGATAAG+AGG | - | chr7_1:79465765-79465784 | None:intergenic | 25.0% |
| !!! | TAATTTTAAGATCTAGGAAC+TGG | + | chr7_1:79465989-79466008 | Msa1041820:five_prime_UTR | 25.0% |
| !! | AAATTGTTATGTTTTGCTTC+TGG | - | chr7_1:79466058-79466077 | None:intergenic | 25.0% |
| !! | TTGATTCCTTTAAACTCTTT+TGG | + | chr7_1:79466125-79466144 | Msa1041820:five_prime_UTR | 25.0% |
| ! | ATAGATCCAAAAGAGTTTAA+AGG | - | chr7_1:79466134-79466153 | None:intergenic | 25.0% |
| !! | CTTAATAATGGAACAATCAA+TGG | - | chr7_1:79466359-79466378 | None:intergenic | 25.0% |
| !!! | GCACTTTTTTTAATGTATGT+AGG | + | chr7_1:79466636-79466655 | Msa1041820:intron | 25.0% |
| ! | TAGGTTTATCAATTGTCAAT+TGG | + | chr7_1:79466655-79466674 | Msa1041820:intron | 25.0% |
| !! | TGGCAAAATCAATGTTTTAT+TGG | + | chr7_1:79466952-79466971 | Msa1041820:intron | 25.0% |
| ! | ACAAAAAAAAATGTAGGAGT+TGG | + | chr7_1:79467050-79467069 | Msa1041820:intron | 25.0% |
| ! | TTTGCTTATAGAAAAACTGT+CGG | + | chr7_1:79467418-79467437 | Msa1041820:intron | 25.0% |
| ! | AAATTAAAGAGAAACAAACG+TGG | - | chr7_1:79467574-79467593 | None:intergenic | 25.0% |
| ! | GTGGTGATTAAAAAATTTAG+AGG | + | chr7_1:79467649-79467668 | Msa1041820:intron | 25.0% |
| !!! | GAATGTTTTTTTTAATCGGT+CGG | + | chr7_1:79467688-79467707 | Msa1041820:intron | 25.0% |
| !!! | GATTAATATTTTTGGTTAGG+TGG | + | chr7_1:79467735-79467754 | Msa1041820:intron | 25.0% |
| ! | GATATTAAACTTCTTGAGAT+AGG | - | chr7_1:79467782-79467801 | None:intergenic | 25.0% |
| !!! | ATAAATATTGCTTTTGTCCT+CGG | + | chr7_1:79467895-79467914 | Msa1041820:intron | 25.0% |
| !!! | AGAACCCTTACTTTTTTTTT+AGG | + | chr7_1:79467958-79467977 | Msa1041820:intron | 25.0% |
| !!! | GAACCCTTACTTTTTTTTTA+GGG | + | chr7_1:79467959-79467978 | Msa1041820:intron | 25.0% |
| !!! | AACCCTTACTTTTTTTTTAG+GGG | + | chr7_1:79467960-79467979 | Msa1041820:intron | 25.0% |
| ! | TCCATATGTATAAAAAGGAA+GGG | - | chr7_1:79468087-79468106 | None:intergenic | 25.0% |
| ! | ATCCATATGTATAAAAAGGA+AGG | - | chr7_1:79468088-79468107 | None:intergenic | 25.0% |
| ! | CCATATCCATATGTATAAAA+AGG | - | chr7_1:79468092-79468111 | None:intergenic | 25.0% |
| !! | CCTTTTTATACATATGGATA+TGG | + | chr7_1:79468089-79468108 | Msa1041820:intron | 25.0% |
| !!! | TCTGTAATGATTTTTTTGGA+GGG | - | chr7_1:79468133-79468152 | None:intergenic | 25.0% |
| !! | CTGAATACATCTATTTTGTT+TGG | + | chr7_1:79468211-79468230 | Msa1041820:intron | 25.0% |
| ! | CTATAAATGAATCATTAGCT+AGG | - | chr7_1:79468413-79468432 | None:intergenic | 25.0% |
| !!! | AAAGTGTTGATCAAACTTTT+CGG | - | chr7_1:79468468-79468487 | None:intergenic | 25.0% |
| ! | TGTGGAAACAGATAATTAAT+TGG | + | chr7_1:79468500-79468519 | Msa1041820:intron | 25.0% |
| ! | GTGGAAACAGATAATTAATT+GGG | + | chr7_1:79468501-79468520 | Msa1041820:intron | 25.0% |
| ! | TAATTAATTGGGAACTTCTA+CGG | + | chr7_1:79468512-79468531 | Msa1041820:intron | 25.0% |
| !!! | AATTTTTGAAGTAAGAGTAC+CGG | - | chr7_1:79468561-79468580 | None:intergenic | 25.0% |
| ! | TATCAATACACTCAAATCTT+TGG | + | chr7_1:79468886-79468905 | Msa1041820:intron | 25.0% |
| ! | ATCAATACACTCAAATCTTT+GGG | + | chr7_1:79468887-79468906 | Msa1041820:intron | 25.0% |
| ! | ATTCACATAAAGAATTGCTA+TGG | + | chr7_1:79468964-79468983 | Msa1041820:intron | 25.0% |
| !! | AATAATTGAAGATTTTGTGC+GGG | + | chr7_1:79469040-79469059 | Msa1041820:intron | 25.0% |
| !! | ATACTGTTCTGAACTAAAAT+AGG | + | chr7_1:79469816-79469835 | Msa1041820:intron | 25.0% |
| !! | TACTGTTCTGAACTAAAATA+GGG | + | chr7_1:79469817-79469836 | Msa1041820:intron | 25.0% |
| !! | ATCAATTGGTCACTAATTTT+AGG | + | chr7_1:79470268-79470287 | Msa1041820:intron | 25.0% |
| !!! | TAGGTAATTATTTTGAATGC+AGG | + | chr7_1:79470287-79470306 | Msa1041820:intron | 25.0% |
| ! | TTTACAGTTTCTTCTTTGTT+CGG | + | chr7_1:79470531-79470550 | Msa1041820:CDS | 25.0% |
| ! | ACTAACGTCTTAAATTATAG+AGG | - | chr7_1:79470725-79470744 | None:intergenic | 25.0% |
| ! | ATGCTACTATCAAATAACTA+AGG | - | chr7_1:79471148-79471167 | None:intergenic | 25.0% |
| TTTAGAAGAAGAGATAAGAG+GGG | - | chr7_1:79465763-79465782 | None:intergenic | 30.0% | |
| CTGAAATGGAAATATTAACC+TGG | - | chr7_1:79465924-79465943 | None:intergenic | 30.0% | |
| !!! | TTTTAGCTTTTCATGTGACT+AGG | - | chr7_1:79465957-79465976 | None:intergenic | 30.0% |
| ATCAACTTTGGTAAAGAAAC+AGG | - | chr7_1:79466110-79466129 | None:intergenic | 30.0% | |
| GAGTTTAAAGGAATCAACTT+TGG | - | chr7_1:79466122-79466141 | None:intergenic | 30.0% | |
| GAAGACAAATATGTGAACAA+TGG | - | chr7_1:79466173-79466192 | None:intergenic | 30.0% | |
| !! | GTTTTTGTGTCTGATAATGT+CGG | + | chr7_1:79466388-79466407 | Msa1041820:CDS | 30.0% |
| TTCATTGAGAGGGTTTATAT+GGG | + | chr7_1:79466419-79466438 | Msa1041820:CDS | 30.0% | |
| ATTACTCTTGTGAAGCTATT+TGG | + | chr7_1:79466449-79466468 | Msa1041820:CDS | 30.0% | |
| AACCTGAAAAACGTTACAAA+TGG | + | chr7_1:79466477-79466496 | Msa1041820:CDS | 30.0% | |
| ACCTGAAAAACGTTACAAAT+GGG | + | chr7_1:79466478-79466497 | Msa1041820:CDS | 30.0% | |
| TGTATAATGATCCTATCAGA+AGG | - | chr7_1:79466703-79466722 | None:intergenic | 30.0% | |
| GCAAAGTGAACTTTAAATCT+TGG | - | chr7_1:79466787-79466806 | None:intergenic | 30.0% | |
| !!! | AACATTGATTTTGCCATGAA+GGG | - | chr7_1:79466948-79466967 | None:intergenic | 30.0% |
| !!! | AAACATTGATTTTGCCATGA+AGG | - | chr7_1:79466949-79466968 | None:intergenic | 30.0% |
| AATAGAAATGGATACAAAGC+AGG | + | chr7_1:79467135-79467154 | Msa1041820:CDS | 30.0% | |
| !! | TAAACTGCTTCGTTTTTATG+AGG | + | chr7_1:79467616-79467635 | Msa1041820:intron | 30.0% |
| !! | AAACTGCTTCGTTTTTATGA+GGG | + | chr7_1:79467617-79467636 | Msa1041820:intron | 30.0% |
| TTTATGAGGGACTAAAAATG+TGG | + | chr7_1:79467630-79467649 | Msa1041820:intron | 30.0% | |
| !! | CTAGAACTTTTGATTCAAGT+TGG | + | chr7_1:79467828-79467847 | Msa1041820:intron | 30.0% |
| !!! | TTTTGATTCAAGTTGGTCTA+AGG | + | chr7_1:79467835-79467854 | Msa1041820:intron | 30.0% |
| CACCCCTAAAAAAAAAGTAA+GGG | - | chr7_1:79467965-79467984 | None:intergenic | 30.0% | |
| TCACCCCTAAAAAAAAAGTA+AGG | - | chr7_1:79467966-79467985 | None:intergenic | 30.0% | |
| !!! | CTCTGTAATGATTTTTTTGG+AGG | - | chr7_1:79468134-79468153 | None:intergenic | 30.0% |
| !! | TACAGAGAATGTGTTATTTC+AGG | + | chr7_1:79468147-79468166 | Msa1041820:intron | 30.0% |
| TTATGTTCCATGTTGGAAAA+AGG | + | chr7_1:79468238-79468257 | Msa1041820:intron | 30.0% | |
| TATGTTCCATGTTGGAAAAA+GGG | + | chr7_1:79468239-79468258 | Msa1041820:intron | 30.0% | |
| AATCATTAGCTAGGGTAATA+TGG | - | chr7_1:79468404-79468423 | None:intergenic | 30.0% | |
| !! | TTTTATTTCGTGGACGTTTT+TGG | + | chr7_1:79468769-79468788 | Msa1041820:intron | 30.0% |
| TTCTTTATGTGAATAGTGTG+TGG | - | chr7_1:79468958-79468977 | None:intergenic | 30.0% | |
| ! | ACACATTGTAATTTGCATCT+GGG | + | chr7_1:79469170-79469189 | Msa1041820:intron | 30.0% |
| CATGTTTCAGGAAAATACTT+GGG | - | chr7_1:79469261-79469280 | None:intergenic | 30.0% | |
| AACCACAATAATTCCAACAA+CGG | - | chr7_1:79469330-79469349 | None:intergenic | 30.0% | |
| TTAGCAGAAGAGTAGTAAAA+GGG | - | chr7_1:79469401-79469420 | None:intergenic | 30.0% | |
| ATTAGCAGAAGAGTAGTAAA+AGG | - | chr7_1:79469402-79469421 | None:intergenic | 30.0% | |
| TGCATGTGCAAATTTAATGT+TGG | + | chr7_1:79469431-79469450 | Msa1041820:intron | 30.0% | |
| ! | ACTAGATTACCATTTTACTG+TGG | + | chr7_1:79469672-79469691 | Msa1041820:CDS | 30.0% |
| AAAAAACGAATCGAATCAGA+TGG | + | chr7_1:79470050-79470069 | Msa1041820:intron | 30.0% | |
| TAACAACAAAACCTGAATCA+TGG | - | chr7_1:79470175-79470194 | None:intergenic | 30.0% | |
| !! | GTTAAAGTATTGATGTGAGA+AGG | + | chr7_1:79470191-79470210 | Msa1041820:intron | 30.0% |
| CTTGGAGATTATTCAAAACA+AGG | + | chr7_1:79470401-79470420 | Msa1041820:CDS | 30.0% | |
| ATTGAGAGAAATAAACACCT+TGG | - | chr7_1:79470698-79470717 | None:intergenic | 30.0% | |
| GATTGAAGACAGGTATAAAT+TGG | + | chr7_1:79471114-79471133 | Msa1041820:CDS | 30.0% | |
| TGTCACAATCTTTGATATTG+CGG | + | chr7_1:79471193-79471212 | Msa1041820:intron | 30.0% | |
| AACTTATGTGAACTCAACTT+TGG | + | chr7_1:79471233-79471252 | Msa1041820:intron | 30.0% | |
| !! | GCAAACCACTTTTAAAAACT+CGG | + | chr7_1:79471302-79471321 | Msa1041820:intron | 30.0% |
| !! | CAAACCACTTTTAAAAACTC+GGG | + | chr7_1:79471303-79471322 | Msa1041820:intron | 30.0% |
| AGAACAAAGATGACAAATGT+AGG | - | chr7_1:79471379-79471398 | None:intergenic | 30.0% | |
| ! | AGAATTCACTTGTTAGAACT+CGG | + | chr7_1:79471411-79471430 | Msa1041820:intron | 30.0% |
| TAAAGAGAAAGATGAAGAAG+TGG | - | chr7_1:79471491-79471510 | None:intergenic | 30.0% | |
| TAGGTATGCTTCATCTGAAA+TGG | - | chr7_1:79465938-79465957 | None:intergenic | 35.0% | |
| GAAAGAGAAGAATGAGAAGA+GGG | - | chr7_1:79466208-79466227 | None:intergenic | 35.0% | |
| ! | ACTATCCCTTTTGCATTACA+AGG | + | chr7_1:79466278-79466297 | Msa1041820:CDS | 35.0% |
| CCAAATCAAAGAAATCTGCA+TGG | - | chr7_1:79466321-79466340 | None:intergenic | 35.0% | |
| CCATGCAGATTTCTTTGATT+TGG | + | chr7_1:79466318-79466337 | Msa1041820:CDS | 35.0% | |
| GTTCATTGAGAGGGTTTATA+TGG | + | chr7_1:79466418-79466437 | Msa1041820:CDS | 35.0% | |
| ! | TCCCATTTGTAACGTTTTTC+AGG | - | chr7_1:79466482-79466501 | None:intergenic | 35.0% |
| GGTATTTGAACAAGAACCAT+AGG | - | chr7_1:79466545-79466564 | None:intergenic | 35.0% | |
| ACCTATGTACAATGAAAGAG+AGG | + | chr7_1:79466562-79466581 | Msa1041820:CDS | 35.0% | |
| ACCTCTCTTTCATTGTACAT+AGG | - | chr7_1:79466566-79466585 | None:intergenic | 35.0% | |
| ACATATCTTTCAACCCTTCA+TGG | + | chr7_1:79466932-79466951 | Msa1041820:intron | 35.0% | |
| GAAGTTAGGGACAATAGAAA+TGG | + | chr7_1:79467123-79467142 | Msa1041820:CDS | 35.0% | |
| !! | AAAGCAGGTGCTTTAAAAGA+AGG | + | chr7_1:79467150-79467169 | Msa1041820:CDS | 35.0% |
| ATTATGCACCATAAATGGCA+CGG | - | chr7_1:79467262-79467281 | None:intergenic | 35.0% | |
| TCAGGATTATGCACCATAAA+TGG | - | chr7_1:79467267-79467286 | None:intergenic | 35.0% | |
| ATGGTGCATAATCCTGAAAT+TGG | + | chr7_1:79467270-79467289 | Msa1041820:CDS | 35.0% | |
| TGGTGCATAATCCTGAAATT+GGG | + | chr7_1:79467271-79467290 | Msa1041820:CDS | 35.0% | |
| CTTATAGAAAAACTGTCGGT+GGG | + | chr7_1:79467422-79467441 | Msa1041820:intron | 35.0% | |
| GCAACTTTACACATTACACA+GGG | - | chr7_1:79467496-79467515 | None:intergenic | 35.0% | |
| TGCAACTTTACACATTACAC+AGG | - | chr7_1:79467497-79467516 | None:intergenic | 35.0% | |
| AGAAACAAACGTGGCTTAAA+TGG | - | chr7_1:79467565-79467584 | None:intergenic | 35.0% | |
| !! | AGTCTAAAACGAGGTTTTAG+TGG | - | chr7_1:79467867-79467886 | None:intergenic | 35.0% |
| ! | TTGTAAGTGAGTCTAAAACG+AGG | - | chr7_1:79467876-79467895 | None:intergenic | 35.0% |
| ! | TCTCAGCAAAGCATTCATTA+AGG | - | chr7_1:79467996-79468015 | None:intergenic | 35.0% |
| ! | GCCCTTCCTTTTTATACATA+TGG | + | chr7_1:79468083-79468102 | Msa1041820:intron | 35.0% |
| TGGTTTCTTATGTTCCATGT+TGG | + | chr7_1:79468231-79468250 | Msa1041820:intron | 35.0% | |
| ATGATAGATGACTAACCATG+AGG | + | chr7_1:79468340-79468359 | Msa1041820:intron | 35.0% | |
| ! | AGTTTGGCTGTGTAATTTTG+TGG | + | chr7_1:79468442-79468461 | Msa1041820:intron | 35.0% |
| CACTTTACCACTACTTAATG+TGG | + | chr7_1:79468482-79468501 | Msa1041820:intron | 35.0% | |
| TCTGTTTCCACATTAAGTAG+TGG | - | chr7_1:79468492-79468511 | None:intergenic | 35.0% | |
| ! | CACACATTGTAATTTGCATC+TGG | + | chr7_1:79469169-79469188 | Msa1041820:intron | 35.0% |
| GTCACCGTGATATTAAATCT+GGG | - | chr7_1:79469229-79469248 | None:intergenic | 35.0% | |
| TGTCACCGTGATATTAAATC+TGG | - | chr7_1:79469230-79469249 | None:intergenic | 35.0% | |
| GCATGTTTCAGGAAAATACT+TGG | - | chr7_1:79469262-79469281 | None:intergenic | 35.0% | |
| TAGTAAAAGGGAACAAAAGG+AGG | - | chr7_1:79469389-79469408 | None:intergenic | 35.0% | |
| GAGTAGTAAAAGGGAACAAA+AGG | - | chr7_1:79469392-79469411 | None:intergenic | 35.0% | |
| TACTACTCTTCTGCTAATAC+CGG | + | chr7_1:79469404-79469423 | Msa1041820:intron | 35.0% | |
| AAATTTGCACATGCAATTGC+CGG | - | chr7_1:79469426-79469445 | None:intergenic | 35.0% | |
| TGATAAATTTCATGCCAGCA+AGG | + | chr7_1:79469549-79469568 | Msa1041820:intron | 35.0% | |
| CTTCTTGTTCCACAGTAAAA+TGG | - | chr7_1:79469684-79469703 | None:intergenic | 35.0% | |
| TTTACTGTGGAACAAGAAGT+TGG | + | chr7_1:79469685-79469704 | Msa1041820:CDS | 35.0% | |
| TTACTGTGGAACAAGAAGTT+GGG | + | chr7_1:79469686-79469705 | Msa1041820:CDS | 35.0% | |
| CTTATACTTGTCAAACCTGA+AGG | + | chr7_1:79469953-79469972 | Msa1041820:CDS | 35.0% | |
| AATTATGAAAGTGGACCTTC+AGG | - | chr7_1:79469971-79469990 | None:intergenic | 35.0% | |
| AACCTACATTGTCTATGGTT+CGG | + | chr7_1:79470092-79470111 | Msa1041820:intron | 35.0% | |
| !! | CTATGGTTCGGTTATTTAAG+TGG | + | chr7_1:79470104-79470123 | Msa1041820:intron | 35.0% |
| AAACAGTTGAACCATGATTC+AGG | + | chr7_1:79470161-79470180 | Msa1041820:intron | 35.0% | |
| TGAATTGCCAAGTACTTTCA+AGG | + | chr7_1:79470317-79470336 | Msa1041820:CDS | 35.0% | |
| ! | ATTTTCCTGAAAAGATTGGC+TGG | - | chr7_1:79470378-79470397 | None:intergenic | 35.0% |
| !! | AGCCAATCTTTTCAGGAAAA+TGG | + | chr7_1:79470377-79470396 | Msa1041820:CDS | 35.0% |
| ! | GACCATTTTCCTGAAAAGAT+TGG | - | chr7_1:79470382-79470401 | None:intergenic | 35.0% |
| !! | TCTTTTCAGGAAAATGGTCT+TGG | + | chr7_1:79470383-79470402 | Msa1041820:CDS | 35.0% |
| GAAAATAATTCAAGGACCAC+AGG | - | chr7_1:79470431-79470450 | None:intergenic | 35.0% | |
| TACATGTATCTTCTTCCACA+AGG | - | chr7_1:79470510-79470529 | None:intergenic | 35.0% | |
| TGAGAAGAGTGATAACTGAA+GGG | - | chr7_1:79470661-79470680 | None:intergenic | 35.0% | |
| TTGAGAAGAGTGATAACTGA+AGG | - | chr7_1:79470662-79470681 | None:intergenic | 35.0% | |
| ! | GATTGTGTTTTCTACATGTC+AGG | + | chr7_1:79470909-79470928 | Msa1041820:intron | 35.0% |
| GAATCCAAAAGACGAGTAAA+TGG | - | chr7_1:79470940-79470959 | None:intergenic | 35.0% | |
| TATGTCTCTACATAGAGCAA+AGG | + | chr7_1:79470973-79470992 | Msa1041820:CDS | 35.0% | |
| !!! | TCTCAATTTTGGTTGCATAG+TGG | + | chr7_1:79471277-79471296 | Msa1041820:intron | 35.0% |
| !! | AATGCCCGAGTTTTTAAAAG+TGG | - | chr7_1:79471310-79471329 | None:intergenic | 35.0% |
| GGAATGTACCTCTTCTTTAT+CGG | + | chr7_1:79471438-79471457 | Msa1041820:CDS | 35.0% | |
| ATCATGGCATTTGGATATGT+TGG | + | chr7_1:79471531-79471550 | Msa1041820:CDS | 35.0% | |
| GAAGAGATAAGAGGGGAAAT+GGG | - | chr7_1:79465756-79465775 | None:intergenic | 40.0% | |
| AGAAGAGATAAGAGGGGAAA+TGG | - | chr7_1:79465757-79465776 | None:intergenic | 40.0% | |
| !! | GTAACTCACATTGTTTTGCG+TGG | + | chr7_1:79466031-79466050 | Msa1041820:five_prime_UTR | 40.0% |
| CGAAAGAGAAGAATGAGAAG+AGG | - | chr7_1:79466209-79466228 | None:intergenic | 40.0% | |
| TGGCTCCTTGTAATGCAAAA+GGG | - | chr7_1:79466286-79466305 | None:intergenic | 40.0% | |
| TTGGCTCCTTGTAATGCAAA+AGG | - | chr7_1:79466287-79466306 | None:intergenic | 40.0% | |
| CTGCATGGTTATGTCATCTT+TGG | - | chr7_1:79466306-79466325 | None:intergenic | 40.0% | |
| ! | GGTGATGATGTTCATTGAGA+GGG | + | chr7_1:79466409-79466428 | Msa1041820:CDS | 40.0% |
| ! | AGGGAACTCTTGTTATCCTA+TGG | + | chr7_1:79466526-79466545 | Msa1041820:CDS | 40.0% |
| TGGTGGTTACCTTGATTGTT+GGG | - | chr7_1:79466747-79466766 | None:intergenic | 40.0% | |
| ! | TTGGTGGTTACCTTGATTGT+TGG | - | chr7_1:79466748-79466767 | None:intergenic | 40.0% |
| TGCAACTAGAATGCCAAAGA+TGG | + | chr7_1:79467073-79467092 | Msa1041820:CDS | 40.0% | |
| GCAACTAGAATGCCAAAGAT+GGG | + | chr7_1:79467074-79467093 | Msa1041820:CDS | 40.0% | |
| GCTTGAATAAGCCCAATTTC+AGG | - | chr7_1:79467285-79467304 | None:intergenic | 40.0% | |
| ATTCAAGCTCGCTGGAAATT+TGG | + | chr7_1:79467297-79467316 | Msa1041820:CDS | 40.0% | |
| GCTTATAGAAAAACTGTCGG+TGG | + | chr7_1:79467421-79467440 | Msa1041820:intron | 40.0% | |
| !!! | TGATTTTGGTTTTGGGGTGA+TGG | + | chr7_1:79467445-79467464 | Msa1041820:intron | 40.0% |
| AGGGTTGTTCAACCATAAAG+TGG | - | chr7_1:79467477-79467496 | None:intergenic | 40.0% | |
| GTTGCAAACATCACAGTCTA+TGG | + | chr7_1:79467511-79467530 | Msa1041820:intron | 40.0% | |
| ACAAACGTGGCTTAAATGGA+AGG | - | chr7_1:79467561-79467580 | None:intergenic | 40.0% | |
| TTCCATGTTGGAAAAAGGGT+TGG | + | chr7_1:79468243-79468262 | Msa1041820:intron | 40.0% | |
| ! | TTCCAACCCTTTTTCCAACA+TGG | - | chr7_1:79468248-79468267 | None:intergenic | 40.0% |
| TGTTGGAAAAAGGGTTGGAA+TGG | + | chr7_1:79468248-79468267 | Msa1041820:intron | 40.0% | |
| ATATCATATCATGGGCCTCA+TGG | - | chr7_1:79468358-79468377 | None:intergenic | 40.0% | |
| ACGGTACACCAGCAAAATTA+AGG | + | chr7_1:79468531-79468550 | Msa1041820:intron | 40.0% | |
| CCAGCAAAATTAAGGTGTAC+CGG | + | chr7_1:79468539-79468558 | Msa1041820:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | + | chr7_1:79469137-79469156 | Msa1041820:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | + | chr7_1:79469138-79469157 | Msa1041820:intron | 40.0% | |
| GTGACCCAGATTTAATGTCA+CGG | - | chr7_1:79469145-79469164 | None:intergenic | 40.0% | |
| CATCCATGAGTACATTTGTG+TGG | + | chr7_1:79469203-79469222 | Msa1041820:intron | 40.0% | |
| GTGGCCCAGATTTAATATCA+CGG | + | chr7_1:79469222-79469241 | Msa1041820:intron | 40.0% | |
| GTAGTACACATGCATGTTTC+AGG | - | chr7_1:79469273-79469292 | None:intergenic | 40.0% | |
| CACCGTTGTTGGAATTATTG+TGG | + | chr7_1:79469325-79469344 | Msa1041820:intron | 40.0% | |
| GTTACTAGTAACAACCTTGC+TGG | - | chr7_1:79469566-79469585 | None:intergenic | 40.0% | |
| TCTTCCACTTATGCCTTCTT+TGG | + | chr7_1:79469709-79469728 | Msa1041820:CDS | 40.0% | |
| ! | TATGCCTTCTTTGGCTTCAA+CGG | + | chr7_1:79469718-79469737 | Msa1041820:CDS | 40.0% |
| TTTACCGTTGAAGCCAAAGA+AGG | - | chr7_1:79469725-79469744 | None:intergenic | 40.0% | |
| CTGAACTAAAATAGGGACTG+CGG | + | chr7_1:79469824-79469843 | Msa1041820:intron | 40.0% | |
| TGAACTAAAATAGGGACTGC+GGG | + | chr7_1:79469825-79469844 | Msa1041820:intron | 40.0% | |
| TAGGACCACAGTTGAAGATA+TGG | + | chr7_1:79469893-79469912 | Msa1041820:CDS | 40.0% | |
| CAAGTCCATATCTTCAACTG+TGG | - | chr7_1:79469901-79469920 | None:intergenic | 40.0% | |
| CACAGTTGAAGATATGGACT+TGG | + | chr7_1:79469899-79469918 | Msa1041820:CDS | 40.0% | |
| ! | TTAGAGCTAGTCTCAAAGGA+TGG | + | chr7_1:79469925-79469944 | Msa1041820:CDS | 40.0% |
| CCATAGACAATGTAGGTTCA+CGG | - | chr7_1:79470090-79470109 | None:intergenic | 40.0% | |
| AACCGAACCATAGACAATGT+AGG | - | chr7_1:79470097-79470116 | None:intergenic | 40.0% | |
| TTCAAAACAAGGTAAGCCTG+TGG | + | chr7_1:79470412-79470431 | Msa1041820:intron | 40.0% | |
| ! | TGTTCTACCTGCAACAGTTT+TGG | + | chr7_1:79470595-79470614 | Msa1041820:CDS | 40.0% |
| TGAAGTTGCAGTCCCAAAAT+GGG | + | chr7_1:79470622-79470641 | Msa1041820:CDS | 40.0% | |
| ATCACTCTTCTCAATGCAGT+TGG | + | chr7_1:79470668-79470687 | Msa1041820:CDS | 40.0% | |
| ! | CACTCCATTTACTCGTCTTT+TGG | + | chr7_1:79470933-79470952 | Msa1041820:CDS | 40.0% |
| AGAGCAAAGGCAACTGTTAT+TGG | + | chr7_1:79470986-79471005 | Msa1041820:CDS | 40.0% | |
| ! | AACTGTTATTGGTCTACTGG+AGG | + | chr7_1:79470997-79471016 | Msa1041820:CDS | 40.0% |
| TGGATTGTCACTGAGAAACT+TGG | + | chr7_1:79471037-79471056 | Msa1041820:CDS | 40.0% | |
| TCCAAATGCCATGATGAAGA+AGG | - | chr7_1:79471526-79471545 | None:intergenic | 40.0% | |
| !! | TCCACACAAGTCTAGTTCTG+TGG | + | chr7_1:79465898-79465917 | Msa1041820:five_prime_UTR | 45.0% |
| ! | CGGTGATGATGTTCATTGAG+AGG | + | chr7_1:79466408-79466427 | Msa1041820:CDS | 45.0% |
| TTGTCAATTGGAGCTGCATG+TGG | + | chr7_1:79466667-79466686 | Msa1041820:CDS | 45.0% | |
| GTCTTTCATGGCCTTCTGAT+AGG | + | chr7_1:79466689-79466708 | Msa1041820:CDS | 45.0% | |
| TACCTTGATTGTTGGGTCAG+TGG | - | chr7_1:79466740-79466759 | None:intergenic | 45.0% | |
| AACCAGAGCCTGATTTCTTG+TGG | + | chr7_1:79467232-79467251 | Msa1041820:CDS | 45.0% | |
| ! | AAACTGTCGGTGGGTGATTT+TGG | + | chr7_1:79467431-79467450 | Msa1041820:intron | 45.0% |
| !!! | TCGGTGGGTGATTTTGGTTT+TGG | + | chr7_1:79467437-79467456 | Msa1041820:intron | 45.0% |
| !!! | CGGTGGGTGATTTTGGTTTT+GGG | + | chr7_1:79467438-79467457 | Msa1041820:intron | 45.0% |
| !!! | GGTGGGTGATTTTGGTTTTG+GGG | + | chr7_1:79467439-79467458 | Msa1041820:intron | 45.0% |
| !!! | TTTTGGTTTTGGGGTGATGG+TGG | + | chr7_1:79467448-79467467 | Msa1041820:intron | 45.0% |
| !!! | TTTGGTTTTGGGGTGATGGT+GGG | + | chr7_1:79467449-79467468 | Msa1041820:intron | 45.0% |
| !! | TGATGGTGGGTACCACTTTA+TGG | + | chr7_1:79467462-79467481 | Msa1041820:intron | 45.0% |
| ! | CGTTCACAACTTTTCGTGAC+AGG | - | chr7_1:79468314-79468333 | None:intergenic | 45.0% |
| ! | CCGGTACACCTTAATTTTGC+TGG | - | chr7_1:79468542-79468561 | None:intergenic | 45.0% |
| GAGGGCAATGCTTGAAACAT+GGG | + | chr7_1:79469094-79469113 | Msa1041820:intron | 45.0% | |
| TTGAAACATGGGACAGCACT+TGG | + | chr7_1:79469105-79469124 | Msa1041820:intron | 45.0% | |
| TGAAACATGGGACAGCACTT+GGG | + | chr7_1:79469106-79469125 | Msa1041820:intron | 45.0% | |
| GTACTCATGGATGTGTTGTG+TGG | - | chr7_1:79469196-79469215 | None:intergenic | 45.0% | |
| CACATCAACAACACCGTTGT+TGG | + | chr7_1:79469314-79469333 | Msa1041820:intron | 45.0% | |
| AGGGAACAAAAGGAGGATGA+AGG | - | chr7_1:79469382-79469401 | None:intergenic | 45.0% | |
| ! | GAAGCCAAAGAAGGCATAAG+TGG | - | chr7_1:79469716-79469735 | None:intergenic | 45.0% |
| ! | TGCGGGAGTATGGAGAATTT+CGG | + | chr7_1:79469842-79469861 | Msa1041820:CDS | 45.0% |
| ! | GCTGTTAGAGCTAGTCTCAA+AGG | + | chr7_1:79469921-79469940 | Msa1041820:CDS | 45.0% |
| ATCGAATCAGATGGTTCCTC+TGG | + | chr7_1:79470059-79470078 | Msa1041820:intron | 45.0% | |
| CCGTGAACCTACATTGTCTA+TGG | + | chr7_1:79470087-79470106 | Msa1041820:intron | 45.0% | |
| ! | ACCAACGATGCTGTTGGTAA+CGG | - | chr7_1:79470347-79470366 | None:intergenic | 45.0% |
| !! | CATTGCAGAAAGTGTCCTTG+TGG | + | chr7_1:79470492-79470511 | Msa1041820:intron | 45.0% |
| TCAGGTACCAAAACTGTTGC+AGG | - | chr7_1:79470605-79470624 | None:intergenic | 45.0% | |
| !!! | CATTTTGGGACTGCAACTTC+AGG | - | chr7_1:79470623-79470642 | None:intergenic | 45.0% |
| CTGAAGTTGCAGTCCCAAAA+TGG | + | chr7_1:79470621-79470640 | Msa1041820:CDS | 45.0% | |
| GAAGTTGCAGTCCCAAAATG+GGG | + | chr7_1:79470623-79470642 | Msa1041820:CDS | 45.0% | |
| TCAATGCAGTTGGAACTCCA+AGG | + | chr7_1:79470678-79470697 | Msa1041820:CDS | 45.0% | |
| ! | GGCAACTGTTATTGGTCTAC+TGG | + | chr7_1:79470994-79471013 | Msa1041820:CDS | 45.0% |
| ! | AGGCTAGTCGAGTGAATGAA+TGG | + | chr7_1:79471017-79471036 | Msa1041820:CDS | 45.0% |
| GAAACTTGGAGATGCTCTCA+AGG | + | chr7_1:79471051-79471070 | Msa1041820:CDS | 45.0% | |
| CTGTCTTCAATCCTGAATCG+AGG | - | chr7_1:79471106-79471125 | None:intergenic | 45.0% | |
| CTCGATTCAGGATTGAAGAC+AGG | + | chr7_1:79471104-79471123 | Msa1041820:CDS | 45.0% | |
| !! | CACTTGTTAGAACTCGGTGT+TGG | + | chr7_1:79471417-79471436 | Msa1041820:intron | 45.0% |
| TGATGAAGAAGGCGATTGCT+TGG | - | chr7_1:79471515-79471534 | None:intergenic | 45.0% | |
| AGCAATCGCCTTCTTCATCA+TGG | + | chr7_1:79471515-79471534 | Msa1041820:CDS | 45.0% | |
| GCCTTCTTCATCATGGCATT+TGG | + | chr7_1:79471522-79471541 | Msa1041820:CDS | 45.0% | |
| TTTCGTTCCCAACTCCTAGA+AGG | + | chr7_1:79471557-79471576 | Msa1041820:CDS | 45.0% | |
| !! | AGAAAAAATATATAAAATAA+AGG | - | chr7_1:79468193-79468212 | None:intergenic | 5.0% |
| !! | AAAAAACATAATAAAAAAAT+AGG | - | chr7_1:79469606-79469625 | None:intergenic | 5.0% |
| !! | AAAAATAAAATAAAATCTTA+TGG | + | chr7_1:79469769-79469788 | Msa1041820:intron | 5.0% |
| GCCACAGAACTAGACTTGTG+TGG | - | chr7_1:79465902-79465921 | None:intergenic | 50.0% | |
| !! | ACAAGTCTAGTTCTGTGGCC+AGG | + | chr7_1:79465903-79465922 | Msa1041820:five_prime_UTR | 50.0% |
| GAGCTGCATGTGGTCTTTCA+TGG | + | chr7_1:79466677-79466696 | Msa1041820:CDS | 50.0% | |
| CTCCACTGACCCAACAATCA+AGG | + | chr7_1:79466735-79466754 | Msa1041820:CDS | 50.0% | |
| TGCCAAAGATGGGCAAGCAA+AGG | + | chr7_1:79467084-79467103 | Msa1041820:CDS | 50.0% | |
| CTCCTTTGCTTGCCCATCTT+TGG | - | chr7_1:79467089-79467108 | None:intergenic | 50.0% | |
| ACGGTACGCCACAAGAAATC+AGG | - | chr7_1:79467243-79467262 | None:intergenic | 50.0% | |
| TTGGGCTTATTCAAGCTCGC+TGG | + | chr7_1:79467289-79467308 | Msa1041820:CDS | 50.0% | |
| AAGGCAACCACGAAAGCTGA+AGG | - | chr7_1:79467542-79467561 | None:intergenic | 50.0% | |
| GGAGGGTAGTAGAACGAAGT+AGG | - | chr7_1:79468116-79468135 | None:intergenic | 50.0% | |
| GGAGGGCAATGCTTGAAACA+TGG | + | chr7_1:79469093-79469112 | Msa1041820:intron | 50.0% | |
| GGGCCACACAAATGTACTCA+TGG | - | chr7_1:79469209-79469228 | None:intergenic | 50.0% | |
| AAATAGGGACTGCGGGAGTA+TGG | + | chr7_1:79469832-79469851 | Msa1041820:intron | 50.0% | |
| ! | GAGAATTTCGGCGCTGAATG+AGG | + | chr7_1:79469854-79469873 | Msa1041820:CDS | 50.0% |
| TAGGTTCACGGTTCAACCAG+AGG | - | chr7_1:79470078-79470097 | None:intergenic | 50.0% | |
| !! | CGGTAGGCCTTGAAAGTACT+TGG | - | chr7_1:79470327-79470346 | None:intergenic | 50.0% |
| !! | ACGATGCTGTTGGTAACGGT+AGG | - | chr7_1:79470343-79470362 | None:intergenic | 50.0% |
| ACCGTTACCAACAGCATCGT+TGG | + | chr7_1:79470343-79470362 | Msa1041820:CDS | 50.0% | |
| CACAAGACCAACGATGCTGT+TGG | - | chr7_1:79470353-79470372 | None:intergenic | 50.0% | |
| !! | CAACAGCATCGTTGGTCTTG+TGG | + | chr7_1:79470351-79470370 | Msa1041820:CDS | 50.0% |
| ! | GTGGACCAGCCAATCTTTTC+AGG | + | chr7_1:79470370-79470389 | Msa1041820:CDS | 50.0% |
| GATGCTCTCAAGGCTAAAGC+AGG | + | chr7_1:79471061-79471080 | Msa1041820:CDS | 50.0% | |
| CACTCAAGAAGCCTCGATTC+AGG | + | chr7_1:79471092-79471111 | Msa1041820:CDS | 50.0% | |
| CGTAGCAGCCGATAAAGAAG+AGG | - | chr7_1:79471449-79471468 | None:intergenic | 50.0% | |
| GGCTGCTACGATGTCATGTT+TGG | + | chr7_1:79471459-79471478 | Msa1041820:CDS | 50.0% | |
| ! | ACCAGGTCCTTCTAGGAGTT+GGG | - | chr7_1:79471567-79471586 | None:intergenic | 50.0% |
| CGCCACAAGAAATCAGGCTC+TGG | - | chr7_1:79467237-79467256 | None:intergenic | 55.0% | |
| !! | GTGGCGTACCGTGCCATTTA+TGG | + | chr7_1:79467251-79467270 | Msa1041820:CDS | 55.0% |
| GGTACCACCTTCAGCTTTCG+TGG | + | chr7_1:79467532-79467551 | Msa1041820:intron | 55.0% | |
| GCAACCACGAAAGCTGAAGG+TGG | - | chr7_1:79467539-79467558 | None:intergenic | 55.0% | |
| ! | ATTTCGGCGCTGAATGAGGC+TGG | + | chr7_1:79469858-79469877 | Msa1041820:CDS | 55.0% |
| ! | GAATGAGGCTGGTGGATGGA+AGG | + | chr7_1:79469869-79469888 | Msa1041820:CDS | 55.0% |
| ! | AGGCTGGTGGATGGAAGGAT+AGG | + | chr7_1:79469874-79469893 | Msa1041820:CDS | 55.0% |
| TCCCAACTCCTAGAAGGACC+TGG | + | chr7_1:79471563-79471582 | Msa1041820:CDS | 55.0% | |
| ! | CACCAGGTCCTTCTAGGAGT+TGG | - | chr7_1:79471568-79471587 | None:intergenic | 55.0% |
| CGCTGAATGAGGCTGGTGGA+TGG | + | chr7_1:79469865-79469884 | Msa1041820:CDS | 60.0% | |
| ! | TCGGCGCTGAATGAGGCTGG+TGG | + | chr7_1:79469861-79469880 | Msa1041820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 79465649 | 79471588 | 79465649 | ID=Msa1041820;Name=Msa1041820 |
| chr7_1 | mRNA | 79465649 | 79471588 | 79465649 | ID=Msa1041820-mRNA-1;Parent=Msa1041820;Name=Msa1041820-mRNA-1;_AED=0.16;_eAED=0.16;_QI=605|0.87|0.77|1|1|1|9|0|536 |
| chr7_1 | exon | 79465649 | 79466583 | 79465649 | ID=Msa1041820-mRNA-1:exon:21439;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79466658 | 79466756 | 79466658 | ID=Msa1041820-mRNA-1:exon:21440;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79467066 | 79467318 | 79467066 | ID=Msa1041820-mRNA-1:exon:21441;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79469629 | 79469739 | 79469629 | ID=Msa1041820-mRNA-1:exon:21442;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79469838 | 79469974 | 79469838 | ID=Msa1041820-mRNA-1:exon:21443;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79470309 | 79470422 | 79470309 | ID=Msa1041820-mRNA-1:exon:21444;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79470500 | 79470699 | 79470500 | ID=Msa1041820-mRNA-1:exon:21445;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79470931 | 79471135 | 79470931 | ID=Msa1041820-mRNA-1:exon:21446;Parent=Msa1041820-mRNA-1 |
| chr7_1 | exon | 79471427 | 79471588 | 79471427 | ID=Msa1041820-mRNA-1:exon:21447;Parent=Msa1041820-mRNA-1 |
| chr7_1 | five_prime_UTR | 79465649 | 79466253 | 79465649 | ID=Msa1041820-mRNA-1:five_prime_utr;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79466254 | 79466583 | 79466254 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79466658 | 79466756 | 79466658 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79467066 | 79467318 | 79467066 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79469629 | 79469739 | 79469629 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79469838 | 79469974 | 79469838 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79470309 | 79470422 | 79470309 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79470500 | 79470699 | 79470500 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79470931 | 79471135 | 79470931 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| chr7_1 | CDS | 79471427 | 79471588 | 79471427 | ID=Msa1041820-mRNA-1:cds;Parent=Msa1041820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
