AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167400 MtrunA17_Chr7g0265711 98.758 483 5 1 1 483 1 482 0.0 988
Msa1167400 MtrunA17_Chr1g0179441 85.501 469 68 0 12 480 2 470 0.0 871
Msa1167400 MtrunA17_Chr1g0179381 77.684 475 105 1 13 487 3 476 0.0 801
Msa1167400 MtrunA17_Chr1g0179421 76.582 474 111 0 13 486 3 476 0.0 800
Msa1167400 MtrunA17_Chr1g0198111 76.923 481 106 2 1 480 1 477 0.0 777
Msa1167400 MtrunA17_Chr4g0027221 71.460 452 128 1 10 461 10 460 0.0 726
Msa1167400 MtrunA17_Chr7g0264621 68.062 454 142 2 29 480 25 477 0.0 679
Msa1167400 MtrunA17_Chr1g0179391 81.711 339 62 0 142 480 1 339 0.0 612
Msa1167400 MtrunA17_Chr6g0451381 45.595 454 241 2 27 480 138 585 6.93e-144 429
Msa1167400 MtrunA17_Chr4g0000581 47.368 437 227 2 24 460 166 599 3.75e-141 423
Msa1167400 MtrunA17_Chr3g0135191 47.332 431 222 3 29 458 171 597 1.02e-140 422
Msa1167400 MtrunA17_Chr3g0139081 48.046 435 222 3 25 458 151 582 1.36e-140 421
Msa1167400 MtrunA17_Chr8g0339101 46.172 431 226 3 29 458 175 600 1.05e-126 386
Msa1167400 MtrunA17_Chr1g0179401 67.939 131 42 0 13 143 3 133 1.96e-58 191
Msa1167400 MtrunA17_Chr4g0064791 44.361 133 67 2 74 199 68 200 1.55e-25 104
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167400 AT5G03760.1 79.324 503 99 3 1 502 1 499 0.0 854
Msa1167400 AT5G22740.1 72.614 482 130 2 1 480 1 482 0.0 773
Msa1167400 AT1G23480.1 69.677 465 140 1 17 480 39 503 0.0 707
Msa1167400 AT1G23480.2 69.677 465 140 1 17 480 39 503 0.0 707
Msa1167400 AT2G35650.1 66.460 483 159 1 5 487 27 506 0.0 702
Msa1167400 AT1G23480.3 72.854 431 116 1 51 480 1 431 0.0 685
Msa1167400 AT4G13410.1 63.853 462 167 0 13 474 27 488 0.0 685
Msa1167400 AT2G35650.4 69.565 437 130 1 51 487 1 434 0.0 669
Msa1167400 AT2G35650.2 69.565 437 130 1 51 487 1 434 0.0 669
Msa1167400 AT1G24070.1 67.972 434 139 0 31 464 56 489 0.0 669
Msa1167400 AT5G16190.3 67.040 446 146 1 29 474 6 450 0.0 664
Msa1167400 AT5G16190.2 66.592 449 149 1 26 474 3 450 0.0 663
Msa1167400 AT5G16190.4 62.422 479 146 2 29 474 6 483 0.0 648
Msa1167400 AT3G56000.1 63.496 452 158 5 16 460 7 458 0.0 619
Msa1167400 AT5G16190.1 70.000 390 116 1 85 474 1 389 0.0 607
Msa1167400 AT4G16590.1 57.391 460 163 1 13 472 40 466 0.0 589
Msa1167400 AT1G23480.4 73.373 338 90 0 143 480 21 358 0.0 548
Msa1167400 AT2G35650.3 69.054 349 104 2 140 487 3 348 0.0 530
Msa1167400 AT4G13410.2 62.842 366 128 2 13 377 27 385 0.0 520
Msa1167400 AT4G13410.3 66.055 327 111 0 148 474 1 327 6.44e-180 511
Msa1167400 AT1G24070.2 61.979 384 136 4 1 377 22 402 1.77e-176 503
Msa1167400 AT4G31590.1 49.652 431 213 3 29 458 160 587 1.64e-146 437
Msa1167400 AT3G28180.1 47.669 472 234 6 34 505 145 603 2.89e-144 431
Msa1167400 AT2G24630.1 48.268 433 216 3 29 458 160 587 1.10e-142 427
Msa1167400 AT2G24630.2 48.268 433 216 3 29 458 160 587 1.10e-142 427
Msa1167400 AT3G07330.1 45.767 437 232 3 29 463 153 586 3.11e-137 413
Msa1167400 AT3G07330.2 45.767 437 232 3 29 463 153 586 3.11e-137 413
Msa1167400 AT4G07960.1 46.437 435 221 4 29 458 174 601 1.36e-128 391
Msa1167400 AT4G07960.2 46.437 435 221 4 29 458 174 601 1.36e-128 391

Find 142 sgRNAs with CRISPR-Local

Find 479 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCTTTGCTTGCCCATCTT+TGG 0.176325 7_4:-59883799 None:intergenic
TTGATTCCTTTAAACTCTTT+TGG 0.188769 7_4:+59882812 Msa1167400:five_prime_UTR
CACTCCATTTACTCGTCTTT+TGG 0.191826 7_4:+59888548 Msa1167400:CDS
ATTACTCTTGTGAAGCTATT+TGG 0.195420 7_4:+59883136 Msa1167400:CDS
ATTCAAGCTCGCTGGAAATT+TGG 0.211852 7_4:+59884010 Msa1167400:CDS
ATGGTGCATAATCCTGAAAT+TGG 0.230250 7_4:+59883983 Msa1167400:CDS
GTTCATTGAGAGGGTTTATA+TGG 0.236886 7_4:+59883105 Msa1167400:CDS
TCTTCCACTTATGCCTTCTT+TGG 0.238978 7_4:+59887324 Msa1167400:CDS
TCAGGATTATGCACCATAAA+TGG 0.242025 7_4:-59883977 None:intergenic
ATATAAACAGCTCCCCATTT+TGG 0.249304 7_4:-59888250 None:intergenic
CCATGCAGATTTCTTTGATT+TGG 0.256976 7_4:+59883005 Msa1167400:CDS
CTTCTTGTTCCACAGTAAAA+TGG 0.257586 7_4:-59887296 None:intergenic
GTGGCGTACCGTGCCATTTA+TGG 0.258207 7_4:+59883964 Msa1167400:CDS
ATTAAAGATGATATTGAGTT+AGG 0.273179 7_4:+59883193 Msa1167400:CDS
CTTCAACTTAGTACTATAAA+AGG 0.278579 7_4:+59882332 None:intergenic
AACACTGATATTCTTAATAA+TGG 0.287208 7_4:-59883055 None:intergenic
ATAGATCCAAAAGAGTTTAA+AGG 0.287891 7_4:-59882818 None:intergenic
GCTTGAATAAGCCCAATTTC+AGG 0.288015 7_4:-59883995 None:intergenic
CTGCATGGTTATGTCATCTT+TGG 0.289883 7_4:-59882990 None:intergenic
AGAAGAGATAAGAGGGGAAA+TGG 0.299948 7_4:-59882442 None:intergenic
CTGAAGTTGCAGTCCCAAAA+TGG 0.308721 7_4:+59888236 Msa1167400:CDS
AAGAATCACCAGGTCCTTCT+AGG 0.309328 7_4:-59889186 None:intergenic
GAATCCAAAAGACGAGTAAA+TGG 0.317482 7_4:-59888552 None:intergenic
GGAATGTACCTCTTCTTTAT+CGG 0.318375 7_4:+59889053 Msa1167400:CDS
GCCTTCTTCATCATGGCATT+TGG 0.329707 7_4:+59889137 Msa1167400:CDS
TGAATATAAAGTATGAAGTT+AGG 0.333573 7_4:+59883822 Msa1167400:CDS
AGAGCAAAGGCAACTGTTAT+TGG 0.333948 7_4:+59888601 Msa1167400:CDS
TGTTCTACCTGCAACAGTTT+TGG 0.346292 7_4:+59888210 Msa1167400:CDS
AAATAGGGACTGCGGGAGTA+TGG 0.352048 7_4:+59887447 Msa1167400:intron
GAGCAGCATGTGGTCTTTCA+TGG 0.352642 7_4:+59883389 Msa1167400:CDS
GTCTTTCATGGCCTTCTGAT+AGG 0.353195 7_4:+59883401 Msa1167400:CDS
AACTCAATATCATCTTTAAT+CGG 0.371739 7_4:-59883190 None:intergenic
CACTCAAGAAGCCTCGATTC+AGG 0.375542 7_4:+59888707 Msa1167400:CDS
TAGGTATGCTTCATCTGAAA+TGG 0.376678 7_4:-59882622 None:intergenic
GAAGAGATAAGAGGGGAAAT+GGG 0.380252 7_4:-59882441 None:intergenic
GATTGAAGACAGGTATAAAT+TGG 0.381567 7_4:+59888729 Msa1167400:CDS
GGCTGCTACGATGTCATGTT+TGG 0.384233 7_4:+59889074 Msa1167400:CDS
ATCAACTTTGGTAAAGAAAC+AGG 0.387234 7_4:-59882794 None:intergenic
TTTACAGTTTCTTCTTTGTT+CGG 0.390215 7_4:+59888146 Msa1167400:CDS
CTTAATAATGGAACAATCAA+TGG 0.390254 7_4:-59883043 None:intergenic
TGAATTGCCAAGTACTTTCA+AGG 0.396142 7_4:+59887932 Msa1167400:CDS
ATCATGGCATTTGGATATGT+TGG 0.396225 7_4:+59889146 Msa1167400:CDS
ATTTAGAAGAAGAGATAAGA+GGG 0.399486 7_4:-59882449 None:intergenic
TTGGTGGTTACCTTGATTGT+TGG 0.403305 7_4:-59883457 None:intergenic
TTGGCTCCTTGTAATGCAAA+AGG 0.408052 7_4:-59882971 None:intergenic
TAGGTTTATCAATTGTCAAT+TGG 0.410462 7_4:+59883367 Msa1167400:intron
TCAGGTACCAAAACTGTTGC+AGG 0.411860 7_4:-59888217 None:intergenic
TTTCGTTCCCAACTCCTAGA+AGG 0.414328 7_4:+59889172 Msa1167400:CDS
TTATTTAGGAGTTCTCTATA+TGG 0.415455 7_4:-59882392 None:intergenic
AGGGAACTCTTGTTATCCTA+TGG 0.425012 7_4:+59883213 Msa1167400:CDS
GAAGTTAGGGACAATAGAAA+TGG 0.426618 7_4:+59883836 Msa1167400:CDS
TGGTGGTTACCTTGATTGTT+GGG 0.427397 7_4:-59883456 None:intergenic
TGAAGTTGCAGTCCCAAAAT+GGG 0.429590 7_4:+59888237 Msa1167400:CDS
GGCAACTGTTATTGGTCTAC+TGG 0.431153 7_4:+59888609 Msa1167400:CDS
TGGTGCATAATCCTGAAATT+GGG 0.431589 7_4:+59883984 Msa1167400:CDS
TAGGACCACAGTTGAAGATA+TGG 0.439206 7_4:+59887508 Msa1167400:CDS
ACCAGGTCCTTCTAGGAGTT+GGG 0.450800 7_4:-59889179 None:intergenic
CACCAGGTCCTTCTAGGAGT+TGG 0.452352 7_4:-59889180 None:intergenic
AATTTAGAAGAAGAGATAAG+AGG 0.453589 7_4:-59882450 None:intergenic
TGCGGGAGTATGGAGAATTT+CGG 0.455041 7_4:+59887457 Msa1167400:CDS
TTCATTGAGAGGGTTTATAT+GGG 0.458905 7_4:+59883106 Msa1167400:CDS
TTTACTGTGGAACAAGAAGT+TGG 0.466141 7_4:+59887300 Msa1167400:CDS
ACGGTACGCCACAAGAAATC+AGG 0.467117 7_4:-59883953 None:intergenic
GAATATAAAGTATGAAGTTA+GGG 0.471641 7_4:+59883823 Msa1167400:CDS
CAACAGCATCGTTGGTCTTG+TGG 0.474525 7_4:+59887966 Msa1167400:CDS
TTAAAGATGATATTGAGTTA+GGG 0.475445 7_4:+59883194 Msa1167400:CDS
CGGTAGGCCTTGAAAGTACT+TGG 0.476789 7_4:-59887939 None:intergenic
ATCACTCTTCTCAATGCAGT+TGG 0.478452 7_4:+59888283 Msa1167400:CDS
CGAAAGAGAAGAATGAGAAG+AGG 0.480212 7_4:-59882893 None:intergenic
TGCAACTAGAATGCCAAAGA+TGG 0.493450 7_4:+59883786 Msa1167400:CDS
TTTACCGTTGAAGCCAAAGA+AGG 0.495185 7_4:-59887337 None:intergenic
TTACTGTGGAACAAGAAGTT+GGG 0.495324 7_4:+59887301 Msa1167400:CDS
AAAGCAGGTGCTTTAAAAGA+AGG 0.496244 7_4:+59883863 Msa1167400:CDS
TGATGAAGAAGGCGATTGCT+TGG 0.497071 7_4:-59889127 None:intergenic
GAGTTTAAAGGAATCAACTT+TGG 0.502888 7_4:-59882806 None:intergenic
TATGCCTTCTTTGGCTTCAA+CGG 0.507643 7_4:+59887333 Msa1167400:CDS
TACCTTGATTGTTGGGTCAG+TGG 0.509231 7_4:-59883449 None:intergenic
TAAAGAGAAAGATGAAGAAG+TGG 0.512666 7_4:-59889103 None:intergenic
CGCTGAATGAGGCTGGTGGA+TGG 0.512737 7_4:+59887480 Msa1167400:CDS
TGGCTCCTTGTAATGCAAAA+GGG 0.513412 7_4:-59882970 None:intergenic
GAGAATTTCGGCGCTGAATG+AGG 0.515567 7_4:+59887469 Msa1167400:CDS
CGCCACAAGAAATCAGGCTC+TGG 0.518747 7_4:-59883947 None:intergenic
AACCAGAGCCTGATTTCTTG+TGG 0.520038 7_4:+59883945 Msa1167400:CDS
TGGATTGTCACTGAGAAACT+TGG 0.522817 7_4:+59888652 Msa1167400:CDS
AGGCTAGTCGAGTGAATGAA+TGG 0.525944 7_4:+59888632 Msa1167400:CDS
TTGGGCTTATTCAAGCTCGC+TGG 0.526159 7_4:+59884002 Msa1167400:CDS
ATTTCGGCGCTGAATGAGGC+TGG 0.527027 7_4:+59887473 Msa1167400:CDS
CTCGATTCAGGATTGAAGAC+AGG 0.527229 7_4:+59888719 Msa1167400:CDS
CTTGGAGATTATTCAAAACA+AGG 0.528998 7_4:+59888016 Msa1167400:CDS
CTCCACTGACCCAACAATCA+AGG 0.532495 7_4:+59883447 Msa1167400:CDS
GAAAGAGAAGAATGAGAAGA+GGG 0.537970 7_4:-59882892 None:intergenic
TGAACTAAAATAGGGACTGC+GGG 0.541429 7_4:+59887440 Msa1167400:intron
CACAGTTGAAGATATGGACT+TGG 0.542677 7_4:+59887514 Msa1167400:CDS
AGCAATCGCCTTCTTCATCA+TGG 0.549164 7_4:+59889130 Msa1167400:CDS
TCCAAATGCCATGATGAAGA+AGG 0.549329 7_4:-59889138 None:intergenic
AGGCTGGTGGATGGAAGGAT+AGG 0.553645 7_4:+59887489 Msa1167400:CDS
GGTATTTGAACAAGAACCAT+AGG 0.554560 7_4:-59883229 None:intergenic
ACCTCTCTTTCATTGTACAT+AGG 0.555219 7_4:-59883250 None:intergenic
AATAGAAATGGATACAAAGC+AGG 0.560746 7_4:+59883848 Msa1167400:CDS
TTGAGAAGAGTGATAACTGA+AGG 0.561912 7_4:-59888274 None:intergenic
CTGAAATGGAAATATTAACC+TGG 0.561965 7_4:-59882608 None:intergenic
GAAGCCAAAGAAGGCATAAG+TGG 0.564580 7_4:-59887328 None:intergenic
CTTATACTTGTCAAACCTGA+AGG 0.564813 7_4:+59887568 Msa1167400:CDS
CACTTGTTAGAACTCGGTGT+TGG 0.567326 7_4:+59889032 Msa1167400:intron
GAAACTTGGAGATGCTCTCA+AGG 0.573750 7_4:+59888666 Msa1167400:CDS
GATGCTCTCAAGGCTAAAGC+AGG 0.575489 7_4:+59888676 Msa1167400:CDS
GCAACTAGAATGCCAAAGAT+GGG 0.576238 7_4:+59883787 Msa1167400:CDS
ACAAGTCTAGTTCTGTGGCC+AGG 0.577797 7_4:+59882590 Msa1167400:five_prime_UTR
ACCGTTACCAACAGCATCGT+TGG 0.579249 7_4:+59887958 Msa1167400:CDS
TGCCAAAGATGGGCAAGCAA+AGG 0.581743 7_4:+59883797 Msa1167400:CDS
GGTGATGATGTTCATTGAGA+GGG 0.582194 7_4:+59883096 Msa1167400:CDS
GCTGTTAGAGCTAGTCTCAA+AGG 0.586698 7_4:+59887536 Msa1167400:CDS
ATAACAAAAGAAAATGTGAA+AGG 0.592681 7_4:-59882483 None:intergenic
ACCAACGATGCTGTTGGTAA+CGG 0.592939 7_4:-59887959 None:intergenic
TTAGAGCTAGTCTCAAAGGA+TGG 0.596188 7_4:+59887540 Msa1167400:CDS
CATTGCAGAAAGTGTCCTTG+TGG 0.596489 7_4:+59888107 Msa1167400:intron
TTTAGAAGAAGAGATAAGAG+GGG 0.604532 7_4:-59882448 None:intergenic
CGGTGATGATGTTCATTGAG+AGG 0.607961 7_4:+59883095 Msa1167400:CDS
ACCTATGTACAATGAAAGAG+AGG 0.612832 7_4:+59883249 Msa1167400:CDS
TGTATAATGATCCTATCAGA+AGG 0.615758 7_4:-59883412 None:intergenic
GAATGAGGCTGGTGGATGGA+AGG 0.617181 7_4:+59887484 Msa1167400:CDS
TCCACACAAGTCTAGTTCTG+TGG 0.619719 7_4:+59882585 Msa1167400:five_prime_UTR
CGTAGCAGCCGATAAAGAAG+AGG 0.623124 7_4:-59889061 None:intergenic
CAAGTCCATATCTTCAACTG+TGG 0.623849 7_4:-59887513 None:intergenic
GAAGACAAATATGTGAACAA+TGG 0.624585 7_4:-59882857 None:intergenic
CACAAGACCAACGATGCTGT+TGG 0.629785 7_4:-59887965 None:intergenic
AACTGTTATTGGTCTACTGG+AGG 0.630777 7_4:+59888612 Msa1167400:CDS
TCCCAACTCCTAGAAGGACC+TGG 0.631690 7_4:+59889178 Msa1167400:CDS
GCCACAGAACTAGACTTGTG+TGG 0.636428 7_4:-59882586 None:intergenic
TGAGAAGAGTGATAACTGAA+GGG 0.641298 7_4:-59888273 None:intergenic
CTGAACTAAAATAGGGACTG+CGG 0.641588 7_4:+59887439 Msa1167400:intron
CCAAATCAAAGAAATCTGCA+TGG 0.643178 7_4:-59883005 None:intergenic
TTGTCAATTGGAGCAGCATG+TGG 0.643646 7_4:+59883379 Msa1167400:CDS
TACATGTATCTTCTTCCACA+AGG 0.650689 7_4:-59888122 None:intergenic
TCAATGCAGTTGGAACTCCA+AGG 0.651716 7_4:+59888293 Msa1167400:CDS
TATGTCTCTACATAGAGCAA+AGG 0.652156 7_4:+59888588 Msa1167400:CDS
GAAGTTGCAGTCCCAAAATG+GGG 0.657522 7_4:+59888238 Msa1167400:CDS
TTGCTGATTGAAGAATCACC+AGG 0.661147 7_4:-59889196 None:intergenic
TCGGCGCTGAATGAGGCTGG+TGG 0.670749 7_4:+59887476 Msa1167400:CDS
CTGTCTTCAATCCTGAATCG+AGG 0.672002 7_4:-59888718 None:intergenic
ACGATGCTGTTGGTAACGGT+AGG 0.676078 7_4:-59887955 None:intergenic
ATTATGCACCATAAATGGCA+CGG 0.678926 7_4:-59883972 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAATTATAAATTAAA+CGG - chr7_4:59886220-59886239 None:intergenic 0.0%
!!! ATTTAATAAAATTAATTTGG+TGG - chr7_4:59883476-59883495 None:intergenic 10.0%
!! TGGATTTAATAAAATTAATT+TGG - chr7_4:59883479-59883498 None:intergenic 10.0%
!! TTAAATTAAGATTCTTAATA+TGG + chr7_4:59884105-59884124 Msa1167400:intron 10.0%
!!! AATGTAAAGATTAATATTTT+TGG + chr7_4:59884439-59884458 Msa1167400:intron 10.0%
!! TTTAATATCAATGTAATTTA+TGG + chr7_4:59884505-59884524 Msa1167400:intron 10.0%
!! GGTTTATTATTAAAAATTAT+TGG + chr7_4:59884628-59884647 Msa1167400:intron 10.0%
!!! CTATAAAATATATATTTTTG+CGG + chr7_4:59884995-59885014 Msa1167400:intron 10.0%
!!! ATTATTTTATATCATATCAT+GGG - chr7_4:59885077-59885096 None:intergenic 10.0%
!!! TATTATTTTATATCATATCA+TGG - chr7_4:59885078-59885097 None:intergenic 10.0%
!! GATATGATATAAAATAATAA+TGG + chr7_4:59885079-59885098 Msa1167400:intron 10.0%
!!! AAAAATTAAATTTTATTTCG+TGG + chr7_4:59885470-59885489 Msa1167400:intron 10.0%
!! GATTTAATTATTACAATTAT+AGG + chr7_4:59885510-59885529 Msa1167400:intron 10.0%
!! TAACTATTAATTCAATAATT+TGG + chr7_4:59885572-59885591 Msa1167400:intron 10.0%
!! TACTCATATATAATTAAATT+AGG - chr7_4:59885640-59885659 None:intergenic 10.0%
!! AAATAAATCAACAATAATAA+TGG - chr7_4:59885782-59885801 None:intergenic 10.0%
!!! TATTATTGTTGATTTATTTA+TGG + chr7_4:59885783-59885802 Msa1167400:intron 10.0%
!!! AATTAAAAGTTTTAAGTAAA+CGG + chr7_4:59886769-59886788 Msa1167400:intron 10.0%
!!! ATTTTATTTTTATTGTAGAA+AGG - chr7_4:59887375-59887394 None:intergenic 10.0%
!! TAACAAATAAATATATGAAA+TGG + chr7_4:59887846-59887865 Msa1167400:intron 10.0%
!!! GTATTTTATTGTGTTTATTT+AGG - chr7_4:59882409-59882428 None:intergenic 15.0%
!!! AGATGAATGTTTTTTTTAAT+CGG + chr7_4:59884396-59884415 Msa1167400:intron 15.0%
!!! AAAGATTAATATTTTTGGTT+AGG + chr7_4:59884444-59884463 Msa1167400:intron 15.0%
!!! TAATTTTTAATAATAAACCG+AGG - chr7_4:59884627-59884646 None:intergenic 15.0%
!!! CGCAAAAATATATATTTTAT+AGG - chr7_4:59884997-59885016 None:intergenic 15.0%
!!! ATTAAAAGTTTTAAGTAAAC+GGG + chr7_4:59886770-59886789 Msa1167400:intron 15.0%
!! AAATAATTACCTAAAATTAG+TGG - chr7_4:59887895-59887914 None:intergenic 15.0%
!! ATAACAAAAGAAAATGTGAA+AGG - chr7_4:59882486-59882505 None:intergenic 20.0%
!!! GTTTGTTAATTTTAAGATCT+AGG + chr7_4:59882670-59882689 Msa1167400:five_prime_UTR 20.0%
!! TCAAAAACTACTATTTCAAA+TGG + chr7_4:59882922-59882941 Msa1167400:exon 20.0%
!! AACACTGATATTCTTAATAA+TGG - chr7_4:59883058-59883077 None:intergenic 20.0%
!! AACTCAATATCATCTTTAAT+CGG - chr7_4:59883193-59883212 None:intergenic 20.0%
!! ATTAAAGATGATATTGAGTT+AGG + chr7_4:59883193-59883212 Msa1167400:CDS 20.0%
!! TTAAAGATGATATTGAGTTA+GGG + chr7_4:59883194-59883213 Msa1167400:CDS 20.0%
!!! AGTTTTCTTTTAATGTATGT+AGG + chr7_4:59883348-59883367 Msa1167400:intron 20.0%
!!! TTGTAAACGACTATAATTTT+TGG - chr7_4:59883541-59883560 None:intergenic 20.0%
!!! GATGATTAACATTGATTTTA+TGG + chr7_4:59883737-59883756 Msa1167400:intron 20.0%
!! TGGTAACAAAAAAAAAATGT+AGG + chr7_4:59883757-59883776 Msa1167400:intron 20.0%
!! TGAATATAAAGTATGAAGTT+AGG + chr7_4:59883822-59883841 Msa1167400:CDS 20.0%
!! GAATATAAAGTATGAAGTTA+GGG + chr7_4:59883823-59883842 Msa1167400:CDS 20.0%
!!! ATTAATATTTTTGGTTAGGT+GGG + chr7_4:59884448-59884467 Msa1167400:intron 20.0%
!! TTTATAGCATAATATGAGTT+TGG + chr7_4:59885137-59885156 Msa1167400:intron 20.0%
!!! AATTTTTAAAGTAAGAGTAC+CGG - chr7_4:59885272-59885291 None:intergenic 20.0%
!! ATTAAATTAGGCAAATTCTA+TGG - chr7_4:59885628-59885647 None:intergenic 20.0%
!! AATTGCATATATACTCATAT+AGG - chr7_4:59885701-59885720 None:intergenic 20.0%
!! AACATTATACAGCATAAATT+TGG - chr7_4:59885724-59885743 None:intergenic 20.0%
!!! TAATAATTGAAGATTTTGTG+CGG + chr7_4:59885750-59885769 Msa1167400:intron 20.0%
!! AAATCAACAATAATAATGGT+TGG - chr7_4:59885778-59885797 None:intergenic 20.0%
!!! TATTGTTGATTTATTTATGG+AGG + chr7_4:59885786-59885805 Msa1167400:intron 20.0%
!!! ATTGTTGATTTATTTATGGA+GGG + chr7_4:59885787-59885806 Msa1167400:intron 20.0%
!!! ATATGCATTTTGTAAATCAA+TGG - chr7_4:59886531-59886550 None:intergenic 20.0%
!! TTAAAAATAAATGCATCTGT+CGG - chr7_4:59887107-59887126 None:intergenic 20.0%
!!! TTATGTTTTTTCAGTGAATT+CGG + chr7_4:59887230-59887249 Msa1167400:intron 20.0%
!!! GTTTGAAATAATTATGAAAG+TGG - chr7_4:59887595-59887614 None:intergenic 20.0%
!! CAAACTCAATAATTTAATCT+TGG + chr7_4:59887610-59887629 Msa1167400:intron 20.0%
!! GAATATTTATCATGTTTAAG+TGG + chr7_4:59887749-59887768 Msa1167400:intron 20.0%
!! ATTGAGTGTATATTATCAAT+TGG + chr7_4:59887869-59887888 Msa1167400:intron 20.0%
!! TGTAGATTGAAAATAATTCA+AGG - chr7_4:59888054-59888073 None:intergenic 20.0%
!! GCTTATGTATTTGATTAAAA+AGG - chr7_4:59888449-59888468 None:intergenic 20.0%
!! CTTGTATTTAAATGGAAATT+TGG - chr7_4:59888471-59888490 None:intergenic 20.0%
!! ACAAGTTTCTTGTATTTAAA+TGG - chr7_4:59888479-59888498 None:intergenic 20.0%
!!! AAAAATTGTGATCTCAATTT+TGG + chr7_4:59888881-59888900 Msa1167400:intron 20.0%
! TTATTTAGGAGTTCTCTATA+TGG - chr7_4:59882395-59882414 None:intergenic 25.0%
! ATTTAGAAGAAGAGATAAGA+GGG - chr7_4:59882452-59882471 None:intergenic 25.0%
! AATTTAGAAGAAGAGATAAG+AGG - chr7_4:59882453-59882472 None:intergenic 25.0%
!!! TAATTTTAAGATCTAGGAAC+TGG + chr7_4:59882676-59882695 Msa1167400:five_prime_UTR 25.0%
!! AAATTGTTATGTTTTGCTTC+TGG - chr7_4:59882745-59882764 None:intergenic 25.0%
!! TTGATTCCTTTAAACTCTTT+TGG + chr7_4:59882812-59882831 Msa1167400:five_prime_UTR 25.0%
! ATAGATCCAAAAGAGTTTAA+AGG - chr7_4:59882821-59882840 None:intergenic 25.0%
!! CTTAATAATGGAACAATCAA+TGG - chr7_4:59883046-59883065 None:intergenic 25.0%
!!! GTAGATAAGCACTTTTTTTA+AGG + chr7_4:59883315-59883334 Msa1167400:intron 25.0%
! TAGGTTTATCAATTGTCAAT+TGG + chr7_4:59883367-59883386 Msa1167400:intron 25.0%
!! TGGCAAAATCAATGTTTTAT+TGG + chr7_4:59883664-59883683 Msa1167400:intron 25.0%
! CAAAAAAAAAATGTAGGAGT+TGG + chr7_4:59883763-59883782 Msa1167400:intron 25.0%
! TTTGCTTATAGAAAAACTGT+CGG + chr7_4:59884130-59884149 Msa1167400:intron 25.0%
! AAATTAAAGAGAAACAAACG+TGG - chr7_4:59884286-59884305 None:intergenic 25.0%
!!! TAAACTGCTTCGTTTTTATA+AGG + chr7_4:59884328-59884347 Msa1167400:intron 25.0%
!!! AAACTGCTTCGTTTTTATAA+GGG + chr7_4:59884329-59884348 Msa1167400:intron 25.0%
! TTTATAAGGGACTAAAAATG+TGG + chr7_4:59884342-59884361 Msa1167400:intron 25.0%
! GTGGTGATTAAAAAATTTAG+AGG + chr7_4:59884361-59884380 Msa1167400:intron 25.0%
!!! GAATGTTTTTTTTAATCGGT+CGG + chr7_4:59884400-59884419 Msa1167400:intron 25.0%
!!! GATTAATATTTTTGGTTAGG+TGG + chr7_4:59884447-59884466 Msa1167400:intron 25.0%
! GATATTAAACTTCTTGAGAT+AGG - chr7_4:59884494-59884513 None:intergenic 25.0%
!!! ATAAATATTGCTTTTGTCCT+CGG + chr7_4:59884607-59884626 Msa1167400:intron 25.0%
!!! AGAACCCTTACTTTTTTTTA+GGG + chr7_4:59884670-59884689 Msa1167400:intron 25.0%
! TCCATATGTATAAAAAGGAA+GGG - chr7_4:59884798-59884817 None:intergenic 25.0%
! ATCCATATGTATAAAAAGGA+AGG - chr7_4:59884799-59884818 None:intergenic 25.0%
! CCATATCCATATGTATAAAA+AGG - chr7_4:59884803-59884822 None:intergenic 25.0%
!! CCTTTTTATACATATGGATA+TGG + chr7_4:59884800-59884819 Msa1167400:intron 25.0%
!!! ATTCTCTGCAATGATTTTTT+TGG - chr7_4:59884848-59884867 None:intergenic 25.0%
!! CTGAATACATCTATTTTGTT+TGG + chr7_4:59884922-59884941 Msa1167400:intron 25.0%
! TATAAATGAATCATTCGCTA+GGG - chr7_4:59885123-59885142 None:intergenic 25.0%
!!! AAAGTGTTGATCAAACTTTT+CGG - chr7_4:59885179-59885198 None:intergenic 25.0%
! TGTGGAAACAGATAATTAAT+TGG + chr7_4:59885211-59885230 Msa1167400:intron 25.0%
! GTGGAAACAGATAATTAATT+GGG + chr7_4:59885212-59885231 Msa1167400:intron 25.0%
! TGGAAACAGATAATTAATTG+GGG + chr7_4:59885213-59885232 Msa1167400:intron 25.0%
! TATCAATACACTCAAATCTT+TGG + chr7_4:59885597-59885616 Msa1167400:intron 25.0%
! ATCAATACACTCAAATCTTT+GGG + chr7_4:59885598-59885617 Msa1167400:intron 25.0%
! ATTCACATAAAGAATTGCTA+TGG + chr7_4:59885675-59885694 Msa1167400:intron 25.0%
!! AATAATTGAAGATTTTGTGC+GGG + chr7_4:59885751-59885770 Msa1167400:intron 25.0%
!! ATTTTCTCAAAGTTATTGCT+TGG + chr7_4:59886352-59886371 Msa1167400:intron 25.0%
! CAACACATTACATAAACTAA+TGG - chr7_4:59886383-59886402 None:intergenic 25.0%
!! AATGTGTTGACATAAACTAA+TGG + chr7_4:59886394-59886413 Msa1167400:intron 25.0%
!! ATATAGTTATGTCACTTGAT+TGG + chr7_4:59886547-59886566 Msa1167400:intron 25.0%
!! TATAGTTATGTCACTTGATT+GGG + chr7_4:59886548-59886567 Msa1167400:intron 25.0%
! TAAATTACTAATTGAGTCGT+CGG + chr7_4:59886714-59886733 Msa1167400:intron 25.0%
!! ATACTGTTCTGAACTAAAAT+AGG + chr7_4:59887431-59887450 Msa1167400:intron 25.0%
!! TACTGTTCTGAACTAAAATA+GGG + chr7_4:59887432-59887451 Msa1167400:intron 25.0%
!!! TAGGTAATTATTTTGAATGC+AGG + chr7_4:59887902-59887921 Msa1167400:intron 25.0%
! TTTACAGTTTCTTCTTTGTT+CGG + chr7_4:59888146-59888165 Msa1167400:CDS 25.0%
! ACTAACGTCTTAAATTATAG+AGG - chr7_4:59888340-59888359 None:intergenic 25.0%
! ATGCTACTATCAAATAACTA+AGG - chr7_4:59888763-59888782 None:intergenic 25.0%
TTTAGAAGAAGAGATAAGAG+GGG - chr7_4:59882451-59882470 None:intergenic 30.0%
CTGAAATGGAAATATTAACC+TGG - chr7_4:59882611-59882630 None:intergenic 30.0%
!!! TTTTAGCTTTTCATGTGACT+AGG - chr7_4:59882644-59882663 None:intergenic 30.0%
ATCAACTTTGGTAAAGAAAC+AGG - chr7_4:59882797-59882816 None:intergenic 30.0%
GAGTTTAAAGGAATCAACTT+TGG - chr7_4:59882809-59882828 None:intergenic 30.0%
GAAGACAAATATGTGAACAA+TGG - chr7_4:59882860-59882879 None:intergenic 30.0%
!! GTTTTTGTGTCTGATAATGT+CGG + chr7_4:59883075-59883094 Msa1167400:CDS 30.0%
TTCATTGAGAGGGTTTATAT+GGG + chr7_4:59883106-59883125 Msa1167400:CDS 30.0%
ATTACTCTTGTGAAGCTATT+TGG + chr7_4:59883136-59883155 Msa1167400:CDS 30.0%
AACCTGAAAAACGTTACAAA+TGG + chr7_4:59883164-59883183 Msa1167400:CDS 30.0%
ACCTGAAAAACGTTACAAAT+GGG + chr7_4:59883165-59883184 Msa1167400:CDS 30.0%
TGTATAATGATCCTATCAGA+AGG - chr7_4:59883415-59883434 None:intergenic 30.0%
GCAAAGTGAACTTTAAATCT+TGG - chr7_4:59883499-59883518 None:intergenic 30.0%
!!! AACATTGATTTTGCCATGAA+GGG - chr7_4:59883660-59883679 None:intergenic 30.0%
!!! AAACATTGATTTTGCCATGA+AGG - chr7_4:59883661-59883680 None:intergenic 30.0%
AATAGAAATGGATACAAAGC+AGG + chr7_4:59883848-59883867 Msa1167400:CDS 30.0%
!! CTAGAACTTTTGATTCAAGT+TGG + chr7_4:59884540-59884559 Msa1167400:intron 30.0%
!!! TTTTGATTCAAGTTGGTCTA+AGG + chr7_4:59884547-59884566 Msa1167400:intron 30.0%
!! AGTCTAAAATGAGGTTTTAG+TGG - chr7_4:59884579-59884598 None:intergenic 30.0%
! TTGTAAGTGAGTCTAAAATG+AGG - chr7_4:59884588-59884607 None:intergenic 30.0%
!!! GAGAACCCTTACTTTTTTTT+AGG + chr7_4:59884669-59884688 Msa1167400:intron 30.0%
!!! GAACCCTTACTTTTTTTTAG+GGG + chr7_4:59884671-59884690 Msa1167400:intron 30.0%
TCACCCCTAAAAAAAAGTAA+GGG - chr7_4:59884677-59884696 None:intergenic 30.0%
!!! TCTGCAATGATTTTTTTGGA+GGG - chr7_4:59884844-59884863 None:intergenic 30.0%
TTATGTTCCATGTTGGAAAA+AGG + chr7_4:59884949-59884968 Msa1167400:intron 30.0%
TATGTTCCATGTTGGAAAAA+GGG + chr7_4:59884950-59884969 Msa1167400:intron 30.0%
CTATAAATGAATCATTCGCT+AGG - chr7_4:59885124-59885143 None:intergenic 30.0%
TAATTAATTGGGGACTTCTA+CGG + chr7_4:59885223-59885242 Msa1167400:intron 30.0%
!! TTTTATTTCGTGGACGTTTT+TGG + chr7_4:59885480-59885499 Msa1167400:intron 30.0%
TTCTTTATGTGAATAGTGTG+TGG - chr7_4:59885669-59885688 None:intergenic 30.0%
! ACACATTGTCATTTGCATTT+GGG + chr7_4:59885881-59885900 Msa1167400:intron 30.0%
CATGTTTCAGGAAAATACTT+GGG - chr7_4:59885972-59885991 None:intergenic 30.0%
! CTTTTCTTTTCTTGACATGA+TGG - chr7_4:59886271-59886290 None:intergenic 30.0%
! CTTTGAGAAAATTCATACCA+GGG - chr7_4:59886344-59886363 None:intergenic 30.0%
! ACTTTGAGAAAATTCATACC+AGG - chr7_4:59886345-59886364 None:intergenic 30.0%
TCGTGAAGAATAAACAACAA+TGG + chr7_4:59886426-59886445 Msa1167400:intron 30.0%
ACAATGGTGTATGCATAAAA+TGG + chr7_4:59886442-59886461 Msa1167400:intron 30.0%
AGCAAAATACAAAAGAGGTT+CGG - chr7_4:59886649-59886668 None:intergenic 30.0%
!!! AAAAGTTTTAAGTAAACGGG+CGG + chr7_4:59886773-59886792 Msa1167400:intron 30.0%
TTTGCAGAAGAGTAGTAAAA+GGG - chr7_4:59887016-59887035 None:intergenic 30.0%
ATTTGCAGAAGAGTAGTAAA+AGG - chr7_4:59887017-59887036 None:intergenic 30.0%
TGCATGTGCAAATTTAATGT+TGG + chr7_4:59887046-59887065 Msa1167400:intron 30.0%
! ACTAGATTACCATTTTACTG+TGG + chr7_4:59887287-59887306 Msa1167400:CDS 30.0%
AAAAAACGAATCGAATCAGA+TGG + chr7_4:59887665-59887684 Msa1167400:intron 30.0%
TAACAACAAAACCTGAATCA+TGG - chr7_4:59887790-59887809 None:intergenic 30.0%
!! GTTAAAGTATTGATGTGAGA+AGG + chr7_4:59887806-59887825 Msa1167400:intron 30.0%
! ATCAATTGGCCACTAATTTT+AGG + chr7_4:59887883-59887902 Msa1167400:intron 30.0%
CTTGGAGATTATTCAAAACA+AGG + chr7_4:59888016-59888035 Msa1167400:CDS 30.0%
ATTGAGAGAAATAAACACCT+TGG - chr7_4:59888313-59888332 None:intergenic 30.0%
GATTGAAGACAGGTATAAAT+TGG + chr7_4:59888729-59888748 Msa1167400:CDS 30.0%
TGTCACAATCTTTGATATTG+CGG + chr7_4:59888808-59888827 Msa1167400:intron 30.0%
AACTTATGTGAACTCAACTT+TGG + chr7_4:59888848-59888867 Msa1167400:intron 30.0%
!! GCAAACCACTTTTAAAAACT+CGG + chr7_4:59888917-59888936 Msa1167400:intron 30.0%
!! CAAACCACTTTTAAAAACTC+GGG + chr7_4:59888918-59888937 Msa1167400:intron 30.0%
AGAACAAAGATGACAAATGT+AGG - chr7_4:59888994-59889013 None:intergenic 30.0%
! AGAATTCACTTGTTAGAACT+CGG + chr7_4:59889026-59889045 Msa1167400:intron 30.0%
TAAAGAGAAAGATGAAGAAG+TGG - chr7_4:59889106-59889125 None:intergenic 30.0%
TAGGTATGCTTCATCTGAAA+TGG - chr7_4:59882625-59882644 None:intergenic 35.0%
GAAAGAGAAGAATGAGAAGA+GGG - chr7_4:59882895-59882914 None:intergenic 35.0%
! ACTATCCCTTTTGCATTACA+AGG + chr7_4:59882965-59882984 Msa1167400:CDS 35.0%
CCAAATCAAAGAAATCTGCA+TGG - chr7_4:59883008-59883027 None:intergenic 35.0%
CCATGCAGATTTCTTTGATT+TGG + chr7_4:59883005-59883024 Msa1167400:CDS 35.0%
GTTCATTGAGAGGGTTTATA+TGG + chr7_4:59883105-59883124 Msa1167400:CDS 35.0%
! TCCCATTTGTAACGTTTTTC+AGG - chr7_4:59883169-59883188 None:intergenic 35.0%
GGTATTTGAACAAGAACCAT+AGG - chr7_4:59883232-59883251 None:intergenic 35.0%
ACCTATGTACAATGAAAGAG+AGG + chr7_4:59883249-59883268 Msa1167400:CDS 35.0%
ACCTCTCTTTCATTGTACAT+AGG - chr7_4:59883253-59883272 None:intergenic 35.0%
ACATATCTTTCAACCCTTCA+TGG + chr7_4:59883644-59883663 Msa1167400:intron 35.0%
GAAGTTAGGGACAATAGAAA+TGG + chr7_4:59883836-59883855 Msa1167400:CDS 35.0%
!! AAAGCAGGTGCTTTAAAAGA+AGG + chr7_4:59883863-59883882 Msa1167400:CDS 35.0%
ATTATGCACCATAAATGGCA+CGG - chr7_4:59883975-59883994 None:intergenic 35.0%
TCAGGATTATGCACCATAAA+TGG - chr7_4:59883980-59883999 None:intergenic 35.0%
ATGGTGCATAATCCTGAAAT+TGG + chr7_4:59883983-59884002 Msa1167400:CDS 35.0%
TGGTGCATAATCCTGAAATT+GGG + chr7_4:59883984-59884003 Msa1167400:CDS 35.0%
CTTATAGAAAAACTGTCGGT+GGG + chr7_4:59884134-59884153 Msa1167400:intron 35.0%
GCAACTTTACACATTACACA+GGG - chr7_4:59884208-59884227 None:intergenic 35.0%
TGCAACTTTACACATTACAC+AGG - chr7_4:59884209-59884228 None:intergenic 35.0%
AGAAACAAACGTGGCTTAAA+TGG - chr7_4:59884277-59884296 None:intergenic 35.0%
CTCACCCCTAAAAAAAAGTA+AGG - chr7_4:59884678-59884697 None:intergenic 35.0%
! TCTCAGCAAAGCATTCATTA+AGG - chr7_4:59884707-59884726 None:intergenic 35.0%
! GCCCTTCCTTTTTATACATA+TGG + chr7_4:59884794-59884813 Msa1167400:intron 35.0%
!!! CTCTGCAATGATTTTTTTGG+AGG - chr7_4:59884845-59884864 None:intergenic 35.0%
!! TGCAGAGAATGTGTTATTTC+AGG + chr7_4:59884858-59884877 Msa1167400:intron 35.0%
TGGTTTCTTATGTTCCATGT+TGG + chr7_4:59884942-59884961 Msa1167400:intron 35.0%
ATGATAGATGACTAACCATG+AGG + chr7_4:59885051-59885070 Msa1167400:intron 35.0%
AATCATTCGCTAGGGTAATA+TGG - chr7_4:59885115-59885134 None:intergenic 35.0%
! AGTTTGGCTGTGTAATTTTG+TGG + chr7_4:59885153-59885172 Msa1167400:intron 35.0%
CACTTTACCACTACTTAATG+TGG + chr7_4:59885193-59885212 Msa1167400:intron 35.0%
TCTGTTTCCACATTAAGTAG+TGG - chr7_4:59885203-59885222 None:intergenic 35.0%
! CACACATTGTCATTTGCATT+TGG + chr7_4:59885880-59885899 Msa1167400:intron 35.0%
GCATGTTTCAGGAAAATACT+TGG - chr7_4:59885973-59885992 None:intergenic 35.0%
ATAGTACACATGCATGTTTC+AGG - chr7_4:59885984-59886003 None:intergenic 35.0%
TGGAATTAGAGCTGTCAAAA+CGG + chr7_4:59886046-59886065 Msa1167400:intron 35.0%
AGGGCTTGGACATAAAAATT+TGG + chr7_4:59886110-59886129 Msa1167400:intron 35.0%
GGGCTTGGACATAAAAATTT+GGG + chr7_4:59886111-59886130 Msa1167400:intron 35.0%
!!! TAAAAAGGCCCGGTTTTAAA+CGG - chr7_4:59886138-59886157 None:intergenic 35.0%
! TTTTCTTGACATGATGGTTG+TGG - chr7_4:59886265-59886284 None:intergenic 35.0%
!!! GCCAAAGGTAGTTTTGTTTT+GGG + chr7_4:59886595-59886614 Msa1167400:intron 35.0%
ACCCAAAACAAAACTACCTT+TGG - chr7_4:59886599-59886618 None:intergenic 35.0%
TGTTGCATGGTGTTTGTTTA+AGG + chr7_4:59886623-59886642 Msa1167400:intron 35.0%
! GAACCTCTTTTGTATTTTGC+TGG + chr7_4:59886648-59886667 Msa1167400:intron 35.0%
ATGCCAGCAAAATACAAAAG+AGG - chr7_4:59886654-59886673 None:intergenic 35.0%
!!! AAAGTTTTAAGTAAACGGGC+GGG + chr7_4:59886774-59886793 Msa1167400:intron 35.0%
CAAAAATATTTGTCCAAGCC+CGG - chr7_4:59886826-59886845 None:intergenic 35.0%
! AGCTCTAGTTGGAATTATTG+TGG + chr7_4:59886940-59886959 Msa1167400:intron 35.0%
TAGTAAAAGGGAACAAAAGG+AGG - chr7_4:59887004-59887023 None:intergenic 35.0%
GAGTAGTAAAAGGGAACAAA+AGG - chr7_4:59887007-59887026 None:intergenic 35.0%
TACTACTCTTCTGCAAATAC+CGG + chr7_4:59887019-59887038 Msa1167400:intron 35.0%
AAATTTGCACATGCAATTGC+CGG - chr7_4:59887041-59887060 None:intergenic 35.0%
TGATAAATTTCATGCCAGCA+AGG + chr7_4:59887164-59887183 Msa1167400:intron 35.0%
CTTCTTGTTCCACAGTAAAA+TGG - chr7_4:59887299-59887318 None:intergenic 35.0%
TTTACTGTGGAACAAGAAGT+TGG + chr7_4:59887300-59887319 Msa1167400:CDS 35.0%
TTACTGTGGAACAAGAAGTT+GGG + chr7_4:59887301-59887320 Msa1167400:CDS 35.0%
CTTATACTTGTCAAACCTGA+AGG + chr7_4:59887568-59887587 Msa1167400:CDS 35.0%
AATTATGAAAGTGGACCTTC+AGG - chr7_4:59887586-59887605 None:intergenic 35.0%
AACCTACATTGTCTATGGTT+CGG + chr7_4:59887707-59887726 Msa1167400:intron 35.0%
!! CTATGGTTCGGTTATTTAAG+TGG + chr7_4:59887719-59887738 Msa1167400:intron 35.0%
AAACAGTTGAACCATGATTC+AGG + chr7_4:59887776-59887795 Msa1167400:intron 35.0%
TGAATTGCCAAGTACTTTCA+AGG + chr7_4:59887932-59887951 Msa1167400:CDS 35.0%
! ATTTTCCTGAAAAGATTGGC+TGG - chr7_4:59887993-59888012 None:intergenic 35.0%
!! AGCCAATCTTTTCAGGAAAA+TGG + chr7_4:59887992-59888011 Msa1167400:CDS 35.0%
! GACCATTTTCCTGAAAAGAT+TGG - chr7_4:59887997-59888016 None:intergenic 35.0%
!! TCTTTTCAGGAAAATGGTCT+TGG + chr7_4:59887998-59888017 Msa1167400:CDS 35.0%
GAAAATAATTCAAGGACCAC+AGG - chr7_4:59888046-59888065 None:intergenic 35.0%
TACATGTATCTTCTTCCACA+AGG - chr7_4:59888125-59888144 None:intergenic 35.0%
! TATAAACAGCTCCCCATTTT+GGG - chr7_4:59888252-59888271 None:intergenic 35.0%
! ATATAAACAGCTCCCCATTT+TGG - chr7_4:59888253-59888272 None:intergenic 35.0%
TGAGAAGAGTGATAACTGAA+GGG - chr7_4:59888276-59888295 None:intergenic 35.0%
TTGAGAAGAGTGATAACTGA+AGG - chr7_4:59888277-59888296 None:intergenic 35.0%
! GATTGTGTTTTCTACATGTC+AGG + chr7_4:59888524-59888543 Msa1167400:intron 35.0%
GAATCCAAAAGACGAGTAAA+TGG - chr7_4:59888555-59888574 None:intergenic 35.0%
TATGTCTCTACATAGAGCAA+AGG + chr7_4:59888588-59888607 Msa1167400:CDS 35.0%
!!! TCTCAATTTTGGTTGCATAG+TGG + chr7_4:59888892-59888911 Msa1167400:intron 35.0%
!! AATGCCCGAGTTTTTAAAAG+TGG - chr7_4:59888925-59888944 None:intergenic 35.0%
GGAATGTACCTCTTCTTTAT+CGG + chr7_4:59889053-59889072 Msa1167400:CDS 35.0%
ATCATGGCATTTGGATATGT+TGG + chr7_4:59889146-59889165 Msa1167400:CDS 35.0%
GAAGAGATAAGAGGGGAAAT+GGG - chr7_4:59882444-59882463 None:intergenic 40.0%
AGAAGAGATAAGAGGGGAAA+TGG - chr7_4:59882445-59882464 None:intergenic 40.0%
!! GTAACTCACATTGTTTTGCG+TGG + chr7_4:59882718-59882737 Msa1167400:five_prime_UTR 40.0%
CGAAAGAGAAGAATGAGAAG+AGG - chr7_4:59882896-59882915 None:intergenic 40.0%
TGGCTCCTTGTAATGCAAAA+GGG - chr7_4:59882973-59882992 None:intergenic 40.0%
TTGGCTCCTTGTAATGCAAA+AGG - chr7_4:59882974-59882993 None:intergenic 40.0%
CTGCATGGTTATGTCATCTT+TGG - chr7_4:59882993-59883012 None:intergenic 40.0%
! GGTGATGATGTTCATTGAGA+GGG + chr7_4:59883096-59883115 Msa1167400:CDS 40.0%
! AGGGAACTCTTGTTATCCTA+TGG + chr7_4:59883213-59883232 Msa1167400:CDS 40.0%
TGGTGGTTACCTTGATTGTT+GGG - chr7_4:59883459-59883478 None:intergenic 40.0%
! TTGGTGGTTACCTTGATTGT+TGG - chr7_4:59883460-59883479 None:intergenic 40.0%
TGCAACTAGAATGCCAAAGA+TGG + chr7_4:59883786-59883805 Msa1167400:CDS 40.0%
GCAACTAGAATGCCAAAGAT+GGG + chr7_4:59883787-59883806 Msa1167400:CDS 40.0%
GCTTGAATAAGCCCAATTTC+AGG - chr7_4:59883998-59884017 None:intergenic 40.0%
ATTCAAGCTCGCTGGAAATT+TGG + chr7_4:59884010-59884029 Msa1167400:CDS 40.0%
GCTTATAGAAAAACTGTCGG+TGG + chr7_4:59884133-59884152 Msa1167400:intron 40.0%
!!! TGATTTTGGTTTTGGGGTGA+TGG + chr7_4:59884157-59884176 Msa1167400:intron 40.0%
AGGGTTGTTCAACCATAAAG+TGG - chr7_4:59884189-59884208 None:intergenic 40.0%
GTTGCAAACATCACAGTCTA+TGG + chr7_4:59884223-59884242 Msa1167400:intron 40.0%
ACAAACGTGGCTTAAATGGA+AGG - chr7_4:59884273-59884292 None:intergenic 40.0%
TTCCATGTTGGAAAAAGGGT+TGG + chr7_4:59884954-59884973 Msa1167400:intron 40.0%
! TTCCAACCCTTTTTCCAACA+TGG - chr7_4:59884959-59884978 None:intergenic 40.0%
TGTTGGAAAAAGGGTTGGAA+TGG + chr7_4:59884959-59884978 Msa1167400:intron 40.0%
ATATCATATCATGGGCCTCA+TGG - chr7_4:59885069-59885088 None:intergenic 40.0%
ACGGTACACCAGCAAAATTA+AGG + chr7_4:59885242-59885261 Msa1167400:intron 40.0%
CCAGCAAAATTAAGGTGTAC+CGG + chr7_4:59885250-59885269 Msa1167400:intron 40.0%
TGTCACCGTGACATTAAATC+TGG + chr7_4:59885848-59885867 Msa1167400:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr7_4:59885849-59885868 Msa1167400:intron 40.0%
GTGACCCAGATTTAATGTCA+CGG - chr7_4:59885856-59885875 None:intergenic 40.0%
CATCCATGAGTACATTTGTG+TGG + chr7_4:59885914-59885933 Msa1167400:intron 40.0%
GTGGCTCAGATTTAATGTCA+CGG + chr7_4:59885933-59885952 Msa1167400:intron 40.0%
! GACAGCTCTAATTCCAACAA+CGG - chr7_4:59886042-59886061 None:intergenic 40.0%
GGAATTAGAGCTGTCAAAAC+GGG + chr7_4:59886047-59886066 Msa1167400:intron 40.0%
! AATTTGGGCCCGTTTAAAAC+CGG + chr7_4:59886126-59886145 Msa1167400:intron 40.0%
!!! AAAAAGGCCCGGTTTTAAAC+GGG - chr7_4:59886137-59886156 None:intergenic 40.0%
!! TAAATTAAACGGGCTATCCG+CGG - chr7_4:59886209-59886228 None:intergenic 40.0%
! ACATGATGGTTGTGGATTGT+AGG - chr7_4:59886257-59886276 None:intergenic 40.0%
! AGTTATGTCACTTGATTGGG+TGG + chr7_4:59886551-59886570 Msa1167400:intron 40.0%
! GTTATGTCACTTGATTGGGT+GGG + chr7_4:59886552-59886571 Msa1167400:intron 40.0%
! TTATGTCACTTGATTGGGTG+GGG + chr7_4:59886553-59886572 Msa1167400:intron 40.0%
AACAAAACTACCTTTGGCCA+AGG - chr7_4:59886593-59886612 None:intergenic 40.0%
!!! GGCCAAAGGTAGTTTTGTTT+TGG + chr7_4:59886594-59886613 Msa1167400:intron 40.0%
!! GTTTTGGGTCTTTTGTTGCA+TGG + chr7_4:59886610-59886629 Msa1167400:intron 40.0%
! TTTTGAGCCCGTTTATCTTC+CGG + chr7_4:59886841-59886860 Msa1167400:intron 40.0%
AAAAAGGCCCGGAAGATAAA+CGG - chr7_4:59886852-59886871 None:intergenic 40.0%
TCCAACTAGAGCTGTCAAAA+CGG - chr7_4:59886933-59886952 None:intergenic 40.0%
GTTACTAGTAACAACCTTGC+TGG - chr7_4:59887181-59887200 None:intergenic 40.0%
TCTTCCACTTATGCCTTCTT+TGG + chr7_4:59887324-59887343 Msa1167400:CDS 40.0%
! TATGCCTTCTTTGGCTTCAA+CGG + chr7_4:59887333-59887352 Msa1167400:CDS 40.0%
TTTACCGTTGAAGCCAAAGA+AGG - chr7_4:59887340-59887359 None:intergenic 40.0%
CTGAACTAAAATAGGGACTG+CGG + chr7_4:59887439-59887458 Msa1167400:intron 40.0%
TGAACTAAAATAGGGACTGC+GGG + chr7_4:59887440-59887459 Msa1167400:intron 40.0%
TAGGACCACAGTTGAAGATA+TGG + chr7_4:59887508-59887527 Msa1167400:CDS 40.0%
CAAGTCCATATCTTCAACTG+TGG - chr7_4:59887516-59887535 None:intergenic 40.0%
CACAGTTGAAGATATGGACT+TGG + chr7_4:59887514-59887533 Msa1167400:CDS 40.0%
! TTAGAGCTAGTCTCAAAGGA+TGG + chr7_4:59887540-59887559 Msa1167400:CDS 40.0%
CCATAGACAATGTAGGTTCA+CGG - chr7_4:59887705-59887724 None:intergenic 40.0%
AACCGAACCATAGACAATGT+AGG - chr7_4:59887712-59887731 None:intergenic 40.0%
TTCAAAACAAGGTAAGCCTG+TGG + chr7_4:59888027-59888046 Msa1167400:intron 40.0%
! TGTTCTACCTGCAACAGTTT+TGG + chr7_4:59888210-59888229 Msa1167400:CDS 40.0%
TGAAGTTGCAGTCCCAAAAT+GGG + chr7_4:59888237-59888256 Msa1167400:CDS 40.0%
ATCACTCTTCTCAATGCAGT+TGG + chr7_4:59888283-59888302 Msa1167400:CDS 40.0%
! CACTCCATTTACTCGTCTTT+TGG + chr7_4:59888548-59888567 Msa1167400:CDS 40.0%
AGAGCAAAGGCAACTGTTAT+TGG + chr7_4:59888601-59888620 Msa1167400:CDS 40.0%
! AACTGTTATTGGTCTACTGG+AGG + chr7_4:59888612-59888631 Msa1167400:CDS 40.0%
TGGATTGTCACTGAGAAACT+TGG + chr7_4:59888652-59888671 Msa1167400:CDS 40.0%
TCCAAATGCCATGATGAAGA+AGG - chr7_4:59889141-59889160 None:intergenic 40.0%
!! TCCACACAAGTCTAGTTCTG+TGG + chr7_4:59882585-59882604 Msa1167400:five_prime_UTR 45.0%
! CGGTGATGATGTTCATTGAG+AGG + chr7_4:59883095-59883114 Msa1167400:CDS 45.0%
TTGTCAATTGGAGCAGCATG+TGG + chr7_4:59883379-59883398 Msa1167400:CDS 45.0%
GTCTTTCATGGCCTTCTGAT+AGG + chr7_4:59883401-59883420 Msa1167400:CDS 45.0%
TACCTTGATTGTTGGGTCAG+TGG - chr7_4:59883452-59883471 None:intergenic 45.0%
AACCAGAGCCTGATTTCTTG+TGG + chr7_4:59883945-59883964 Msa1167400:CDS 45.0%
! AAACTGTCGGTGGGTGATTT+TGG + chr7_4:59884143-59884162 Msa1167400:intron 45.0%
!!! TCGGTGGGTGATTTTGGTTT+TGG + chr7_4:59884149-59884168 Msa1167400:intron 45.0%
!!! CGGTGGGTGATTTTGGTTTT+GGG + chr7_4:59884150-59884169 Msa1167400:intron 45.0%
!!! GGTGGGTGATTTTGGTTTTG+GGG + chr7_4:59884151-59884170 Msa1167400:intron 45.0%
!!! TTTTGGTTTTGGGGTGATGG+TGG + chr7_4:59884160-59884179 Msa1167400:intron 45.0%
!!! TTTGGTTTTGGGGTGATGGT+GGG + chr7_4:59884161-59884180 Msa1167400:intron 45.0%
!! TGATGGTGGGTACCACTTTA+TGG + chr7_4:59884174-59884193 Msa1167400:intron 45.0%
! CGTTCACAACTTTTCGTGAC+AGG - chr7_4:59885025-59885044 None:intergenic 45.0%
! CCGGTACACCTTAATTTTGC+TGG - chr7_4:59885253-59885272 None:intergenic 45.0%
GAGGGCAATGCTTGAAACAT+GGG + chr7_4:59885805-59885824 Msa1167400:intron 45.0%
TTGAAACATGGGACAGCACT+TGG + chr7_4:59885816-59885835 Msa1167400:intron 45.0%
TGAAACATGGGACAGCACTT+GGG + chr7_4:59885817-59885836 Msa1167400:intron 45.0%
GTACTCATGGATGTGTTGTG+TGG - chr7_4:59885907-59885926 None:intergenic 45.0%
GAGCCACACAAATGTACTCA+TGG - chr7_4:59885920-59885939 None:intergenic 45.0%
CACATCAACAACACCGTTGT+TGG + chr7_4:59886026-59886045 Msa1167400:intron 45.0%
!!! CTACGTTTTTCGGGCTTTTG+CGG - chr7_4:59886092-59886111 None:intergenic 45.0%
GCAAAAGCCCGAAAAACGTA+GGG + chr7_4:59886091-59886110 Msa1167400:intron 45.0%
! TGTCCAAGCCCTACGTTTTT+CGG - chr7_4:59886102-59886121 None:intergenic 45.0%
! ATTTGGGCCCGTTTAAAACC+GGG + chr7_4:59886127-59886146 Msa1167400:intron 45.0%
GGTGTGTAGTTAACGCTAGT+TGG - chr7_4:59886510-59886529 None:intergenic 45.0%
TTGTTGTGTTCCTTGGCCAA+AGG + chr7_4:59886580-59886599 Msa1167400:intron 45.0%
TTTGAGCCCGTTTATCTTCC+GGG + chr7_4:59886842-59886861 Msa1167400:intron 45.0%
AAAAGGCCCGGAAGATAAAC+GGG - chr7_4:59886851-59886870 None:intergenic 45.0%
! GTTTATCTTCCGGGCCTTTT+TGG + chr7_4:59886851-59886870 Msa1167400:intron 45.0%
CCAACTAGAGCTGTCAAAAC+GGG - chr7_4:59886932-59886951 None:intergenic 45.0%
AGGGAACAAAAGGAGGATGA+AGG - chr7_4:59886997-59887016 None:intergenic 45.0%
! GAAGCCAAAGAAGGCATAAG+TGG - chr7_4:59887331-59887350 None:intergenic 45.0%
! TGCGGGAGTATGGAGAATTT+CGG + chr7_4:59887457-59887476 Msa1167400:CDS 45.0%
! GCTGTTAGAGCTAGTCTCAA+AGG + chr7_4:59887536-59887555 Msa1167400:CDS 45.0%
ATCGAATCAGATGGTTCCTC+TGG + chr7_4:59887674-59887693 Msa1167400:intron 45.0%
CCGTGAACCTACATTGTCTA+TGG + chr7_4:59887702-59887721 Msa1167400:intron 45.0%
! ACCAACGATGCTGTTGGTAA+CGG - chr7_4:59887962-59887981 None:intergenic 45.0%
!! CATTGCAGAAAGTGTCCTTG+TGG + chr7_4:59888107-59888126 Msa1167400:intron 45.0%
TCAGGTACCAAAACTGTTGC+AGG - chr7_4:59888220-59888239 None:intergenic 45.0%
!!! CATTTTGGGACTGCAACTTC+AGG - chr7_4:59888238-59888257 None:intergenic 45.0%
CTGAAGTTGCAGTCCCAAAA+TGG + chr7_4:59888236-59888255 Msa1167400:CDS 45.0%
GAAGTTGCAGTCCCAAAATG+GGG + chr7_4:59888238-59888257 Msa1167400:CDS 45.0%
TCAATGCAGTTGGAACTCCA+AGG + chr7_4:59888293-59888312 Msa1167400:CDS 45.0%
! GGCAACTGTTATTGGTCTAC+TGG + chr7_4:59888609-59888628 Msa1167400:CDS 45.0%
! AGGCTAGTCGAGTGAATGAA+TGG + chr7_4:59888632-59888651 Msa1167400:CDS 45.0%
GAAACTTGGAGATGCTCTCA+AGG + chr7_4:59888666-59888685 Msa1167400:CDS 45.0%
CTGTCTTCAATCCTGAATCG+AGG - chr7_4:59888721-59888740 None:intergenic 45.0%
CTCGATTCAGGATTGAAGAC+AGG + chr7_4:59888719-59888738 Msa1167400:CDS 45.0%
!! CACTTGTTAGAACTCGGTGT+TGG + chr7_4:59889032-59889051 Msa1167400:intron 45.0%
TGATGAAGAAGGCGATTGCT+TGG - chr7_4:59889130-59889149 None:intergenic 45.0%
AGCAATCGCCTTCTTCATCA+TGG + chr7_4:59889130-59889149 Msa1167400:CDS 45.0%
GCCTTCTTCATCATGGCATT+TGG + chr7_4:59889137-59889156 Msa1167400:CDS 45.0%
TTTCGTTCCCAACTCCTAGA+AGG + chr7_4:59889172-59889191 Msa1167400:CDS 45.0%
!! AGAAAAAATATATAAAATAA+AGG - chr7_4:59884904-59884923 None:intergenic 5.0%
!! AAAATAATTATAAATTAAAC+GGG - chr7_4:59886219-59886238 None:intergenic 5.0%
!! ATATATAAAAAAAAAAACAT+TGG + chr7_4:59886691-59886710 Msa1167400:intron 5.0%
!! AAAAAACATAATAAAAAAAT+AGG - chr7_4:59887221-59887240 None:intergenic 5.0%
!! AAAAATAAAATAAAATCTTA+TGG + chr7_4:59887384-59887403 Msa1167400:intron 5.0%
GCCACAGAACTAGACTTGTG+TGG - chr7_4:59882589-59882608 None:intergenic 50.0%
!! ACAAGTCTAGTTCTGTGGCC+AGG + chr7_4:59882590-59882609 Msa1167400:five_prime_UTR 50.0%
GAGCAGCATGTGGTCTTTCA+TGG + chr7_4:59883389-59883408 Msa1167400:CDS 50.0%
CTCCACTGACCCAACAATCA+AGG + chr7_4:59883447-59883466 Msa1167400:CDS 50.0%
TGCCAAAGATGGGCAAGCAA+AGG + chr7_4:59883797-59883816 Msa1167400:CDS 50.0%
CTCCTTTGCTTGCCCATCTT+TGG - chr7_4:59883802-59883821 None:intergenic 50.0%
ACGGTACGCCACAAGAAATC+AGG - chr7_4:59883956-59883975 None:intergenic 50.0%
TTGGGCTTATTCAAGCTCGC+TGG + chr7_4:59884002-59884021 Msa1167400:CDS 50.0%
AAGGCAACCACGAAAGCTGA+AGG - chr7_4:59884254-59884273 None:intergenic 50.0%
GGAGGGTAGTAGAACGAAGT+AGG - chr7_4:59884827-59884846 None:intergenic 50.0%
GGAGGGCAATGCTTGAAACA+TGG + chr7_4:59885804-59885823 Msa1167400:intron 50.0%
TTAGAGCTGTCAAAACGGGC+CGG + chr7_4:59886051-59886070 Msa1167400:intron 50.0%
CGCAAAAGCCCGAAAAACGT+AGG + chr7_4:59886090-59886109 Msa1167400:intron 50.0%
! GTCCAAGCCCTACGTTTTTC+GGG - chr7_4:59886101-59886120 None:intergenic 50.0%
!! TTAACGGGCTCGGGCTAAAA+AGG - chr7_4:59886153-59886172 None:intergenic 50.0%
!! TTTTTAGCCCGAGCCCGTTA+AGG + chr7_4:59886152-59886171 Msa1167400:intron 50.0%
!! GGGCTGTTTGTTGTGTTCCT+TGG + chr7_4:59886573-59886592 Msa1167400:intron 50.0%
!! CCCGTTTTGACAGCTCTAGT+TGG + chr7_4:59886929-59886948 Msa1167400:intron 50.0%
AAATAGGGACTGCGGGAGTA+TGG + chr7_4:59887447-59887466 Msa1167400:intron 50.0%
! GAGAATTTCGGCGCTGAATG+AGG + chr7_4:59887469-59887488 Msa1167400:CDS 50.0%
TAGGTTCACGGTTCAACCAG+AGG - chr7_4:59887693-59887712 None:intergenic 50.0%
!! CGGTAGGCCTTGAAAGTACT+TGG - chr7_4:59887942-59887961 None:intergenic 50.0%
!! ACGATGCTGTTGGTAACGGT+AGG - chr7_4:59887958-59887977 None:intergenic 50.0%
ACCGTTACCAACAGCATCGT+TGG + chr7_4:59887958-59887977 Msa1167400:CDS 50.0%
CACAAGACCAACGATGCTGT+TGG - chr7_4:59887968-59887987 None:intergenic 50.0%
!! CAACAGCATCGTTGGTCTTG+TGG + chr7_4:59887966-59887985 Msa1167400:CDS 50.0%
! GTGGACCAGCCAATCTTTTC+AGG + chr7_4:59887985-59888004 Msa1167400:CDS 50.0%
GATGCTCTCAAGGCTAAAGC+AGG + chr7_4:59888676-59888695 Msa1167400:CDS 50.0%
CACTCAAGAAGCCTCGATTC+AGG + chr7_4:59888707-59888726 Msa1167400:CDS 50.0%
CGTAGCAGCCGATAAAGAAG+AGG - chr7_4:59889064-59889083 None:intergenic 50.0%
GGCTGCTACGATGTCATGTT+TGG + chr7_4:59889074-59889093 Msa1167400:CDS 50.0%
! ACCAGGTCCTTCTAGGAGTT+GGG - chr7_4:59889182-59889201 None:intergenic 50.0%
CGCCACAAGAAATCAGGCTC+TGG - chr7_4:59883950-59883969 None:intergenic 55.0%
!! GTGGCGTACCGTGCCATTTA+TGG + chr7_4:59883964-59883983 Msa1167400:CDS 55.0%
GGTACCACCTTCAGCTTTCG+TGG + chr7_4:59884244-59884263 Msa1167400:intron 55.0%
GCAACCACGAAAGCTGAAGG+TGG - chr7_4:59884251-59884270 None:intergenic 55.0%
TAGAGCTGTCAAAACGGGCC+GGG + chr7_4:59886052-59886071 Msa1167400:intron 55.0%
!!! TTTTTCGGGCTTTTGCGGCC+CGG - chr7_4:59886087-59886106 None:intergenic 55.0%
AGCCCGAAAAACGTAGGGCT+TGG + chr7_4:59886096-59886115 Msa1167400:intron 55.0%
!! TAGTTGGCTGCTGCTGGCTT+GGG - chr7_4:59886494-59886513 None:intergenic 55.0%
TAACGCTAGTTGGCTGCTGC+TGG - chr7_4:59886500-59886519 None:intergenic 55.0%
!! AGCTGTCAAAACGGGCTACC+CGG - chr7_4:59886924-59886943 None:intergenic 55.0%
! ATTTCGGCGCTGAATGAGGC+TGG + chr7_4:59887473-59887492 Msa1167400:CDS 55.0%
! GAATGAGGCTGGTGGATGGA+AGG + chr7_4:59887484-59887503 Msa1167400:CDS 55.0%
! AGGCTGGTGGATGGAAGGAT+AGG + chr7_4:59887489-59887508 Msa1167400:CDS 55.0%
TCCCAACTCCTAGAAGGACC+TGG + chr7_4:59889178-59889197 Msa1167400:CDS 55.0%
! CACCAGGTCCTTCTAGGAGT+TGG - chr7_4:59889183-59889202 None:intergenic 55.0%
! CTAGTTGGCTGCTGCTGGCT+TGG - chr7_4:59886495-59886514 None:intergenic 60.0%
! TTTGCGGGCTACGGGCTTTC+GGG - chr7_4:59886800-59886819 None:intergenic 60.0%
! CTTTGCGGGCTACGGGCTTT+CGG - chr7_4:59886801-59886820 None:intergenic 60.0%
GAAAGCCCGTAGCCCGCAAA+GGG + chr7_4:59886800-59886819 Msa1167400:intron 60.0%
!! TCTTCCGGGCCTTTTTGGCC+CGG + chr7_4:59886856-59886875 Msa1167400:intron 60.0%
! TTTTGCGGGCCGGGCCAAAA+AGG - chr7_4:59886868-59886887 None:intergenic 60.0%
!!! ATGACGGGCTCGGGCTTTTG+CGG - chr7_4:59886883-59886902 None:intergenic 60.0%
CAAAAGCCCGAGCCCGTCAT+GGG + chr7_4:59886883-59886902 Msa1167400:intron 60.0%
CGCTGAATGAGGCTGGTGGA+TGG + chr7_4:59887480-59887499 Msa1167400:CDS 60.0%
GGGCTCGGGCTAAAAAGGCC+CGG - chr7_4:59886148-59886167 None:intergenic 65.0%
!! TAAACGGGCTATCCGCGGCC+CGG - chr7_4:59886204-59886223 None:intergenic 65.0%
CGAAAGCCCGTAGCCCGCAA+AGG + chr7_4:59886799-59886818 Msa1167400:intron 65.0%
TGTCCAAGCCCGGCCCTTTG+CGG - chr7_4:59886816-59886835 None:intergenic 65.0%
!!! TGACGGGCTCGGGCTTTTGC+GGG - chr7_4:59886882-59886901 None:intergenic 65.0%
GCAAAAGCCCGAGCCCGTCA+TGG + chr7_4:59886882-59886901 Msa1167400:intron 65.0%
! TCGGCGCTGAATGAGGCTGG+TGG + chr7_4:59887476-59887495 Msa1167400:CDS 65.0%
TCAAAACGGGCCGGGCCTGC+CGG + chr7_4:59886060-59886079 Msa1167400:intron 70.0%
!! GCTCGGGCCTTAACGGGCTC+GGG - chr7_4:59886162-59886181 None:intergenic 70.0%
!! GGCTCGGGCCTTAACGGGCT+CGG - chr7_4:59886163-59886182 None:intergenic 70.0%
! CGACGGGCTCGGGCCTTAAC+GGG - chr7_4:59886168-59886187 None:intergenic 70.0%
! GCGACGGGCTCGGGCCTTAA+CGG - chr7_4:59886169-59886188 None:intergenic 70.0%
GTTAAGGCCCGAGCCCGTCG+CGG + chr7_4:59886168-59886187 Msa1167400:intron 70.0%
TTAAGGCCCGAGCCCGTCGC+GGG + chr7_4:59886169-59886188 Msa1167400:intron 70.0%
GTCCAAGCCCGGCCCTTTGC+GGG - chr7_4:59886815-59886834 None:intergenic 70.0%
!! GGCTAGCCCATGACGGGCTC+GGG - chr7_4:59886892-59886911 None:intergenic 70.0%
!! GGGCTAGCCCATGACGGGCT+CGG - chr7_4:59886893-59886912 None:intergenic 70.0%
!! GCGACGGGCTAGCCCATGAC+GGG - chr7_4:59886898-59886917 None:intergenic 70.0%
!! CGCGACGGGCTAGCCCATGA+CGG - chr7_4:59886899-59886918 None:intergenic 70.0%
!! CGTCATGGGCTAGCCCGTCG+CGG + chr7_4:59886897-59886916 Msa1167400:intron 70.0%
!! GTCATGGGCTAGCCCGTCGC+GGG + chr7_4:59886898-59886917 Msa1167400:intron 70.0%
CAAAACGGGCCGGGCCTGCC+GGG + chr7_4:59886061-59886080 Msa1167400:intron 75.0%
GCCCGTAGCCCGCAAAGGGC+CGG + chr7_4:59886804-59886823 Msa1167400:intron 75.0%
! CCCGGCCCTTTGCGGGCTAC+GGG - chr7_4:59886808-59886827 None:intergenic 75.0%
CCCGTAGCCCGCAAAGGGCC+GGG + chr7_4:59886805-59886824 Msa1167400:intron 75.0%
! GCCCGGCCCTTTGCGGGCTA+CGG - chr7_4:59886809-59886828 None:intergenic 75.0%
AGCCCGCAAAGGGCCGGGCT+TGG + chr7_4:59886810-59886829 Msa1167400:intron 75.0%
CGGGCCGGGCCAAAAAGGCC+CGG - chr7_4:59886863-59886882 None:intergenic 75.0%
! GGCTCGGGCTTTTGCGGGCC+GGG - chr7_4:59886877-59886896 None:intergenic 75.0%
! GGGCTCGGGCTTTTGCGGGC+CGG - chr7_4:59886878-59886897 None:intergenic 75.0%
!! CTTTTGCGGCCCGGCCCGGC+AGG - chr7_4:59886078-59886097 None:intergenic 80.0%
!! CGGGCTTTTGCGGCCCGGCC+CGG - chr7_4:59886082-59886101 None:intergenic 80.0%
!! GGCTAGCCCGCGACGGGCTC+GGG - chr7_4:59886178-59886197 None:intergenic 80.0%
!!! GGGCTAGCCCGCGACGGGCT+CGG - chr7_4:59886179-59886198 None:intergenic 80.0%
!!! GAGCCCGTCGCGGGCTAGCC+CGG + chr7_4:59886178-59886197 Msa1167400:intron 80.0%
!!! TGGGCTAGCCCGTCGCGGGC+CGG + chr7_4:59886902-59886921 Msa1167400:intron 80.0%
!! ACGGGCTACCCGGCCCGCGA+CGG - chr7_4:59886914-59886933 None:intergenic 80.0%
!!! CGGCCGGGCTAGCCCGCGAC+GGG - chr7_4:59886184-59886203 None:intergenic 85.0%
!!! CCGGCCGGGCTAGCCCGCGA+CGG - chr7_4:59886185-59886204 None:intergenic 85.0%
!!! CCGTCGCGGGCTAGCCCGGC+CGG + chr7_4:59886182-59886201 Msa1167400:intron 85.0%
!!! CGTCGCGGGCTAGCCCGGCC+GGG + chr7_4:59886183-59886202 Msa1167400:intron 85.0%
! GGGCTATCCGCGGCCCGGCC+GGG - chr7_4:59886199-59886218 None:intergenic 85.0%
! CGGGCTATCCGCGGCCCGGC+CGG - chr7_4:59886200-59886219 None:intergenic 85.0%
!!! GGGCTAGCCCGTCGCGGGCC+GGG + chr7_4:59886903-59886922 Msa1167400:intron 85.0%
! CGGGCTACCCGGCCCGCGAC+GGG - chr7_4:59886913-59886932 None:intergenic 85.0%
! ACGGGCCGGGCCTGCCGGGC+CGG + chr7_4:59886065-59886084 Msa1167400:intron 90.0%
!!! GGGCTAGCCCGGCCGGGCCG+CGG + chr7_4:59886189-59886208 Msa1167400:intron 90.0%
! CGGGCCGGGCCTGCCGGGCC+GGG + chr7_4:59886066-59886085 Msa1167400:intron 95.0%
! GCGGCCCGGCCCGGCAGGCC+CGG - chr7_4:59886073-59886092 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 59882335 59889203 59882335 ID=Msa1167400;Name=Msa1167400
chr7_4 mRNA 59882335 59889203 59882335 ID=Msa1167400-mRNA-1;Parent=Msa1167400;Name=Msa1167400-mRNA-1;_AED=0.16;_eAED=0.16;_QI=606|0.87|0.77|1|1|1|9|0|536
chr7_4 exon 59882335 59883270 59882335 ID=Msa1167400-mRNA-1:exon:18628;Parent=Msa1167400-mRNA-1
chr7_4 exon 59883370 59883468 59883370 ID=Msa1167400-mRNA-1:exon:18629;Parent=Msa1167400-mRNA-1
chr7_4 exon 59883779 59884031 59883779 ID=Msa1167400-mRNA-1:exon:18630;Parent=Msa1167400-mRNA-1
chr7_4 exon 59887244 59887354 59887244 ID=Msa1167400-mRNA-1:exon:18631;Parent=Msa1167400-mRNA-1
chr7_4 exon 59887453 59887589 59887453 ID=Msa1167400-mRNA-1:exon:18632;Parent=Msa1167400-mRNA-1
chr7_4 exon 59887924 59888037 59887924 ID=Msa1167400-mRNA-1:exon:18633;Parent=Msa1167400-mRNA-1
chr7_4 exon 59888115 59888314 59888115 ID=Msa1167400-mRNA-1:exon:18634;Parent=Msa1167400-mRNA-1
chr7_4 exon 59888546 59888750 59888546 ID=Msa1167400-mRNA-1:exon:18635;Parent=Msa1167400-mRNA-1
chr7_4 exon 59889042 59889203 59889042 ID=Msa1167400-mRNA-1:exon:18636;Parent=Msa1167400-mRNA-1
chr7_4 five_prime_UTR 59882335 59882940 59882335 ID=Msa1167400-mRNA-1:five_prime_utr;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59882941 59883270 59882941 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59883370 59883468 59883370 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59883779 59884031 59883779 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59887244 59887354 59887244 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59887453 59887589 59887453 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59887924 59888037 59887924 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59888115 59888314 59888115 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59888546 59888750 59888546 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
chr7_4 CDS 59889042 59889203 59889042 ID=Msa1167400-mRNA-1:cds;Parent=Msa1167400-mRNA-1
Gene Sequence

>Msa1167400

ATGGATCATTTTTCTTCTACTACTACTATCCCTTTTGCATTACAAGGAGCCAAAGATGACATAACCATGCAGATTTCTTTGATTTGGAGTCAAATCAAAGCTCCATTGATTGTTCCATTATTAAGAATATCAGTGTTTTTGTGTCTGATAATGTCGGTGATGATGTTCATTGAGAGGGTTTATATGGGTGTTGTCATTACTCTTGTGAAGCTATTTGGAAGAAAACCTGAAAAACGTTACAAATGGGAACCGATTAAAGATGATATTGAGTTAGGGAACTCTTGTTATCCTATGGTTCTTGTTCAAATACCTATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCAGCATGTGGTCTTTCATGGCCTTCTGATAGGATCATTATACAAGTTCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAACTAGAATGCCAAAGATGGGCAAGCAAAGGAGTGAATATAAAGTATGAAGTTAGGGACAATAGAAATGGATACAAAGCAGGTGCTTTAAAAGAAGGAATGAAGCATAGCTATGTGAAACAATGTGATCATGTTGCAATATTTGATGCTGATTTTCAACCAGAGCCTGATTTCTTGTGGCGTACCGTGCCATTTATGGTGCATAATCCTGAAATTGGGCTTATTCAAGCTCGCTGGAAATTTGTGAATTCGGATGAATGTATGATGACTAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTTGGGTCTTCCACTTATGCCTTCTTTGGCTTCAACGGGACTGCGGGAGTATGGAGAATTTCGGCGCTGAATGAGGCTGGTGGATGGAAGGATAGGACCACAGTTGAAGATATGGACTTGGCTGTTAGAGCTAGTCTCAAAGGATGGAAGTTCTTATACTTGTCAAACCTGAAGGTTAAAAATGAATTGCCAAGTACTTTCAAGGCCTACCGTTACCAACAGCATCGTTGGTCTTGTGGACCAGCCAATCTTTTCAGGAAAATGGTCTTGGAGATTATTCAAAACAAGAAAGTGTCCTTGTGGAAGAAGATACATGTAATTTACAGTTTCTTCTTTGTTCGGAAAGTGATAGCACACATCAATACGTTTGTGTTTTATTGCATTGTTCTACCTGCAACAGTTTTGGTACCTGAAGTTGCAGTCCCAAAATGGGGAGCTGTTTATATCCCTTCAGTTATCACTCTTCTCAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTCGTCTTTTGGATTCTATTTGAGAATGTTATGTCTCTACATAGAGCAAAGGCAACTGTTATTGGTCTACTGGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAGAAACTTGGAGATGCTCTCAAGGCTAAAGCAGGAACTAAAGCACTCAAGAAGCCTCGATTCAGGATTGAAGACAGGTATAAATTGAACTCGGTGTTGGAATGTACCTCTTCTTTATCGGCTGCTACGATGTCATGTTTGGAAAAAACCACTTCTTCATCTTTCTCTTTATCCAAGCAATCGCCTTCTTCATCATGGCATTTGGATATGTTGGAACTTTCGTTCCCAACTCCTAGAAGGACCTGGTGA

Protein sequence

>Msa1167400

MDHFSSTTTIPFALQGAKDDITMQISLIWSQIKAPLIVPLLRISVFLCLIMSVMMFIERVYMGVVITLVKLFGRKPEKRYKWEPIKDDIELGNSCYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDHVAIFDADFQPEPDFLWRTVPFMVHNPEIGLIQARWKFVNSDECMMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVLEIIQNKKVSLWKKIHVIYSFFFVRKVIAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRAKATVIGLLEASRVNEWIVTEKLGDALKAKAGTKALKKPRFRIEDRYKLNSVLECTSSLSAATMSCLEKTTSSSFSLSKQSPSSSWHLDMLELSFPTPRRTW*