Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678800 | XP_003605920.1 | 91.129 | 248 | 19 | 1 | 1 | 248 | 1 | 245 | 2.50e-148 | 424 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678800 | sp|P0DKI1|SDH32_ARATH | 45.652 | 92 | 50 | 0 | 147 | 238 | 111 | 202 | 9.52e-22 | 92.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678800 | G7JDI5 | 91.129 | 248 | 19 | 1 | 1 | 248 | 1 | 245 | 1.20e-148 | 424 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050380 | Msa0678800 | -0.818162 | 2.263805e-52 | -8.615850e-47 |
| Msa0672690 | Msa0678800 | -0.806740 | 7.102578e-50 | -8.615850e-47 |
| Msa0678800 | Msa0698930 | -0.807474 | 4.965722e-50 | -8.615850e-47 |
| Msa0678800 | Msa0864470 | 0.803827 | 2.895339e-49 | -8.615850e-47 |
| Msa0678800 | Msa0927380 | -0.803761 | 2.987500e-49 | -8.615850e-47 |
| Msa0678800 | Msa0931520 | -0.806966 | 6.364442e-50 | -8.615850e-47 |
| Msa0678800 | Msa0946280 | 0.815233 | 1.026949e-51 | -8.615850e-47 |
| Msa0678800 | Msa1144720 | 0.841298 | 5.171429e-58 | -8.615850e-47 |
| Msa0678800 | Msa1257800 | 0.804341 | 2.263246e-49 | -8.615850e-47 |
| Msa0678800 | Msa1364830 | -0.800269 | 1.560030e-48 | -8.615850e-47 |
| Msa0678800 | Msa1404240 | 0.822265 | 2.597744e-53 | -8.615850e-47 |
| Msa0678800 | Msa1451620 | 0.846305 | 2.361551e-59 | -8.615850e-47 |
| Msa0678800 | Msa1453560 | -0.807204 | 5.667272e-50 | -8.615850e-47 |
| Msa0183010 | Msa0678800 | 0.802507 | 5.429177e-49 | -8.615850e-47 |
| Msa0223410 | Msa0678800 | 0.803877 | 2.825894e-49 | -8.615850e-47 |
| Msa0380850 | Msa0678800 | -0.803635 | 3.172658e-49 | -8.615850e-47 |
| Msa0383400 | Msa0678800 | 0.809149 | 2.181906e-50 | -8.615850e-47 |
| Msa0392040 | Msa0678800 | 0.816471 | 5.437629e-52 | -8.615850e-47 |
| Msa0433410 | Msa0678800 | 0.815719 | 8.005047e-52 | -8.615850e-47 |
| Msa0458900 | Msa0678800 | 0.818793 | 1.628276e-52 | -8.615850e-47 |
| Msa0469940 | Msa0678800 | 0.822641 | 2.125180e-53 | -8.615850e-47 |
| Msa0472960 | Msa0678800 | 0.801031 | 1.090744e-48 | -8.615850e-47 |
| Msa0344690 | Msa0678800 | 0.821778 | 3.369255e-53 | -8.615850e-47 |
| Msa0350320 | Msa0678800 | 0.807565 | 4.750368e-50 | -8.615850e-47 |
| Msa0528610 | Msa0678800 | 0.801666 | 8.086127e-49 | -8.615850e-47 |
| Msa0585230 | Msa0678800 | -0.814573 | 1.438473e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678800 | MtrunA17_Chr4g0024541 | 91.129 | 248 | 19 | 1 | 1 | 248 | 1 | 245 | 2.30e-152 | 424 |
| Msa0678800 | MtrunA17_Chr2g0310041 | 43.434 | 99 | 32 | 3 | 79 | 156 | 39 | 134 | 6.12e-14 | 68.2 |
| Msa0678800 | MtrunA17_Chr4g0024571 | 44.565 | 92 | 30 | 2 | 86 | 156 | 842 | 933 | 1.25e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678800 | AT5G09600.2 | 45.652 | 92 | 50 | 0 | 147 | 238 | 84 | 175 | 5.19e-23 | 92.8 |
| Msa0678800 | AT5G09600.3 | 45.652 | 92 | 50 | 0 | 147 | 238 | 111 | 202 | 9.68e-23 | 92.8 |
| Msa0678800 | AT5G09600.1 | 45.652 | 92 | 50 | 0 | 147 | 238 | 111 | 202 | 9.68e-23 | 92.8 |
| Msa0678800 | AT4G32210.1 | 45.652 | 92 | 50 | 0 | 147 | 238 | 111 | 202 | 9.68e-23 | 92.8 |
Find 98 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTAATAATTACAATTT+AGG | 0.170978 | 4_4:+35362815 | Msa0678800:three_prime_UTR |
| TGCCAACGAGTTCAATTCTT+TGG | 0.263661 | 4_4:+35356942 | Msa0678800:CDS |
| GTGTTCTGCTGCGGCGGCGG+GGG | 0.268765 | 4_4:-35356650 | None:intergenic |
| AGGTGTTCTGCTGCGGCGGC+GGG | 0.304071 | 4_4:-35356652 | None:intergenic |
| TCAATTTGCAATAGAATTGC+TGG | 0.304214 | 4_4:+35362329 | Msa0678800:CDS |
| GAGGTGTTCTGCTGCGGCGG+CGG | 0.305391 | 4_4:-35356653 | None:intergenic |
| AGAGAGAGATCGACGGGGTT+GGG | 0.307906 | 4_4:-35356444 | None:intergenic |
| AGCTTATTATCCAGATTCTT+AGG | 0.311046 | 4_4:-35356910 | None:intergenic |
| CATGCTTTCCACATGTCATT+AGG | 0.313221 | 4_4:+35362745 | Msa0678800:three_prime_UTR |
| ACAGGAAGATGAGGAGATAA+TGG | 0.320617 | 4_4:-35362278 | None:intergenic |
| GGTGTTCTGCTGCGGCGGCG+GGG | 0.351473 | 4_4:-35356651 | None:intergenic |
| CACCAATAGCATTGGACTCT+TGG | 0.361123 | 4_4:-35362045 | None:intergenic |
| CAATGGTTTACCTAAGAATC+TGG | 0.368181 | 4_4:+35356900 | Msa0678800:CDS |
| CAACAATTGCTTGCAATTTG+AGG | 0.389250 | 4_4:-35362920 | None:intergenic |
| AGCTCATTCACATTGCCTAA+TGG | 0.393832 | 4_4:-35362772 | None:intergenic |
| AAAACACATCACCGAAGTTT+CGG | 0.394338 | 4_4:-35362886 | None:intergenic |
| GAAAGCTGGGGCTGATAAAC+AGG | 0.395418 | 4_4:-35362296 | None:intergenic |
| AATCTGGATAATAAGCTTGC+TGG | 0.404775 | 4_4:+35356916 | Msa0678800:CDS |
| ACCAGACTGCTTTGTCTCAC+TGG | 0.412401 | 4_4:-35362249 | None:intergenic |
| CATCAGAGATATCAGGCTCT+TGG | 0.413078 | 4_4:+35361969 | Msa0678800:intron |
| GAGTGGTGGTGGTCCGGTGG+AGG | 0.429644 | 4_4:-35356672 | None:intergenic |
| CTCAGAATCAAACACTGTTC+AGG | 0.430029 | 4_4:-35362562 | None:intergenic |
| TTGAAAGCGTCGAAGAAAGC+TGG | 0.441687 | 4_4:-35362310 | None:intergenic |
| AACAATTGCTTGCAATTTGA+GGG | 0.443388 | 4_4:-35362919 | None:intergenic |
| ATCGACGGGGTTGGGGCGTG+TGG | 0.447455 | 4_4:-35356436 | None:intergenic |
| TCTTCCATCCCTCGCTCCAC+CGG | 0.449618 | 4_4:+35356616 | Msa0678800:CDS |
| GATATACATGAAAGTGGGTT+TGG | 0.450927 | 4_4:+35362388 | Msa0678800:CDS |
| AGGGAAGAGTGGTGGTGGTC+CGG | 0.451230 | 4_4:-35356678 | None:intergenic |
| GAGAGAGATCGACGGGGTTG+GGG | 0.453493 | 4_4:-35356443 | None:intergenic |
| GCTGACACATTGGGATTGGC+TGG | 0.459366 | 4_4:+35362191 | Msa0678800:CDS |
| GGAAGATGATAAGAAGAACT+TGG | 0.461369 | 4_4:-35356569 | None:intergenic |
| CAGGAAGATGAGGAGATAAT+GGG | 0.473682 | 4_4:-35362277 | None:intergenic |
| GGATCCGGTGGAGCGAGGGA+TGG | 0.482734 | 4_4:-35356620 | None:intergenic |
| AGAGGGATCCGGTGGAGCGA+GGG | 0.482779 | 4_4:-35356624 | None:intergenic |
| AATTGCACTATACAGATGAT+AGG | 0.483923 | 4_4:-35362501 | None:intergenic |
| TAGAATACGAACTGGTAGAA+TGG | 0.485364 | 4_4:-35362428 | None:intergenic |
| ATGTCATTAGGAGTTCCATT+AGG | 0.490592 | 4_4:+35362757 | Msa0678800:three_prime_UTR |
| GAGAGAGAGATCGACGGGGT+TGG | 0.494657 | 4_4:-35356445 | None:intergenic |
| CTTGTTTGCTTCAACCATGT+TGG | 0.497335 | 4_4:+35362722 | Msa0678800:three_prime_UTR |
| TTGATTTGGTTGATCTGAGA+AGG | 0.501813 | 4_4:-35356543 | None:intergenic |
| TGGACTGGACACTAATGTGC+TGG | 0.504894 | 4_4:+35361989 | Msa0678800:CDS |
| ACCAGTGAGACAAAGCAGTC+TGG | 0.505843 | 4_4:+35362248 | Msa0678800:CDS |
| TGAAAGCGTCGAAGAAAGCT+GGG | 0.509221 | 4_4:-35362309 | None:intergenic |
| GAGATATCAGGCTCTTGGAC+TGG | 0.510444 | 4_4:+35361974 | Msa0678800:intron |
| TGTTCTGCTGCGGCGGCGGG+GGG | 0.511869 | 4_4:-35356649 | None:intergenic |
| AACCAAGAGTCCAATGCTAT+TGG | 0.513314 | 4_4:+35362043 | Msa0678800:CDS |
| TACATGAAAGTGGGTTTGGT+TGG | 0.513953 | 4_4:+35362392 | Msa0678800:CDS |
| CCGCAGCAGAACACCTCCAC+CGG | 0.514967 | 4_4:+35356659 | Msa0678800:CDS |
| CTGAACAGTGTTTGATTCTG+AGG | 0.515913 | 4_4:+35362563 | Msa0678800:three_prime_UTR |
| GAGAGGGATCCGGTGGAGCG+AGG | 0.518177 | 4_4:-35356625 | None:intergenic |
| TTGATGAATAGAATACGAAC+TGG | 0.519628 | 4_4:-35362436 | None:intergenic |
| ACAAAGAGAGAGAGATCGAC+GGG | 0.524826 | 4_4:-35356450 | None:intergenic |
| CAATTGCTTGCAATTTGAGG+GGG | 0.526075 | 4_4:-35362917 | None:intergenic |
| TTACATGATATACATGAAAG+TGG | 0.528289 | 4_4:+35362382 | Msa0678800:CDS |
| AAGGAACTCACCAATAGCAT+TGG | 0.529259 | 4_4:-35362053 | None:intergenic |
| GAAGAGTGGTGGTGGTCCGG+TGG | 0.534998 | 4_4:-35356675 | None:intergenic |
| AGTTGAAGAAAGAGAAGGAG+AGG | 0.536116 | 4_4:-35356590 | None:intergenic |
| TACATGATATACATGAAAGT+GGG | 0.543198 | 4_4:+35362383 | Msa0678800:CDS |
| TCTACCAAGGGACATGTCAA+TGG | 0.544954 | 4_4:+35356883 | Msa0678800:CDS |
| ACCACCACCACTCTTCCCTT+AGG | 0.546818 | 4_4:+35356682 | Msa0678800:CDS |
| ACAGATGATAGGACATGGCT+AGG | 0.548357 | 4_4:-35362490 | None:intergenic |
| GGGTGCTGACACATTGGGAT+TGG | 0.554674 | 4_4:+35362187 | Msa0678800:CDS |
| GAGAAAGTTGAAGAAAGAGA+AGG | 0.555620 | 4_4:-35356595 | None:intergenic |
| ACCTAAGGGAAGAGTGGTGG+TGG | 0.558974 | 4_4:-35356683 | None:intergenic |
| CTGGACACTAATGTGCTGGC+TGG | 0.565168 | 4_4:+35361993 | Msa0678800:CDS |
| AGAAACATTGAGAGAGGTGT+GGG | 0.568821 | 4_4:+35362167 | Msa0678800:CDS |
| AGGTGTGGGTGCTGACACAT+TGG | 0.570843 | 4_4:+35362181 | Msa0678800:CDS |
| TAAACCATTGACATGTCCCT+TGG | 0.572355 | 4_4:-35356887 | None:intergenic |
| GTGCTGGCTGGAGCTAGATA+CGG | 0.579781 | 4_4:+35362005 | Msa0678800:CDS |
| ATAGGGACTCAACACTCTGA+TGG | 0.585666 | 4_4:+35362142 | Msa0678800:intron |
| TACCAAAGAATTGAACTCGT+TGG | 0.588237 | 4_4:-35356944 | None:intergenic |
| GGCTGATAAACAGGAAGATG+AGG | 0.588637 | 4_4:-35362287 | None:intergenic |
| GTGGAGGTGTTCTGCTGCGG+CGG | 0.592042 | 4_4:-35356656 | None:intergenic |
| ATTGCTTGCAATTTGAGGGG+GGG | 0.597712 | 4_4:-35362915 | None:intergenic |
| CAGATGATAGGACATGGCTA+GGG | 0.600515 | 4_4:-35362489 | None:intergenic |
| AAATCTCAACAGCAAGTAGG+TGG | 0.601419 | 4_4:-35362463 | None:intergenic |
| CACATCACCGAAGTTTCGGA+TGG | 0.601856 | 4_4:-35362882 | None:intergenic |
| CAGAAATCTCAACAGCAAGT+AGG | 0.602287 | 4_4:-35362466 | None:intergenic |
| ACAATTGCTTGCAATTTGAG+GGG | 0.607213 | 4_4:-35362918 | None:intergenic |
| ATGGAACTCCTAATGACATG+TGG | 0.607624 | 4_4:-35362753 | None:intergenic |
| AAAGCAAGGTGACAGCAGCT+AGG | 0.607874 | 4_4:-35362358 | None:intergenic |
| ATCAGTACCTAAGGGAAGAG+TGG | 0.614456 | 4_4:-35356689 | None:intergenic |
| GGTGTGGGTGCTGACACATT+GGG | 0.614611 | 4_4:+35362182 | Msa0678800:CDS |
| AATTGCTTGCAATTTGAGGG+GGG | 0.615333 | 4_4:-35362916 | None:intergenic |
| GAACTGGTAGAATGGATCAA+AGG | 0.627943 | 4_4:-35362420 | None:intergenic |
| GCGGATGAAAACTCTACCAA+GGG | 0.646432 | 4_4:+35356871 | Msa0678800:intron |
| CCGGTGGAGGTGTTCTGCTG+CGG | 0.649109 | 4_4:-35356659 | None:intergenic |
| CACAAAGAGAGAGAGATCGA+CGG | 0.652476 | 4_4:-35356451 | None:intergenic |
| AGCGGATGAAAACTCTACCA+AGG | 0.652915 | 4_4:+35356870 | Msa0678800:intron |
| ATGTGGAAAGCATGCCAACA+TGG | 0.655221 | 4_4:-35362736 | None:intergenic |
| ATGGCAAGAAACATTGAGAG+AGG | 0.662658 | 4_4:+35362161 | Msa0678800:CDS |
| AAGAAACATTGAGAGAGGTG+TGG | 0.666970 | 4_4:+35362166 | Msa0678800:CDS |
| GAATTGAGAGAATAGAACAA+TGG | 0.668929 | 4_4:-35356495 | None:intergenic |
| TGATCTGAGAAGGCAAGACA+TGG | 0.675369 | 4_4:-35356533 | None:intergenic |
| AGTACCTAAGGGAAGAGTGG+TGG | 0.677891 | 4_4:-35356686 | None:intergenic |
| ACTATACAGATGATAGGACA+TGG | 0.695753 | 4_4:-35362495 | None:intergenic |
| GAAAGCGTCGAAGAAAGCTG+GGG | 0.738416 | 4_4:-35362308 | None:intergenic |
| CAAAGAGAGAGAGATCGACG+GGG | 0.782989 | 4_4:-35356449 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr4_4:35358819-35358838 | None:intergenic | 0.0% |
| !!! | AGTATTCATTTTAAATAAAT+TGG | - | chr4_4:35358756-35358775 | None:intergenic | 10.0% |
| !!! | TTAATTTTTTTTGTTTGAAA+TGG | - | chr4_4:35359179-35359198 | None:intergenic | 10.0% |
| !! | AAAGATATATTCAATAATAA+AGG | - | chr4_4:35361622-35361641 | None:intergenic | 10.0% |
| !! | TAATCATGATGATATATTTA+AGG | - | chr4_4:35356754-35356773 | None:intergenic | 15.0% |
| !! | AAATATATCATCATGATTAT+TGG | + | chr4_4:35356755-35356774 | Msa0678800:intron | 15.0% |
| !!! | TTATTTTTTTTTTCATTCAG+CGG | + | chr4_4:35356852-35356871 | Msa0678800:intron | 15.0% |
| !!! | TTTTGAAATTAATTTTAGCA+GGG | - | chr4_4:35357111-35357130 | None:intergenic | 15.0% |
| !!! | TTTTTGAAATTAATTTTAGC+AGG | - | chr4_4:35357112-35357131 | None:intergenic | 15.0% |
| !!! | TGCTATTTAATACAAATTTT+TGG | + | chr4_4:35357194-35357213 | Msa0678800:intron | 15.0% |
| !! | CACAACAAAAAAAAAAAAAA+CGG | - | chr4_4:35357274-35357293 | None:intergenic | 15.0% |
| !!! | TCTAGTTAAATTTCTAAAAA+GGG | - | chr4_4:35357787-35357806 | None:intergenic | 15.0% |
| !! | AAATATTGAAGATAAGAAAT+AGG | - | chr4_4:35358234-35358253 | None:intergenic | 15.0% |
| !! | CAAAAAAAATTAAGATTAGT+TGG | + | chr4_4:35359186-35359205 | Msa0678800:intron | 15.0% |
| !!! | AATTTTAAAGGTATACAATA+TGG | - | chr4_4:35359528-35359547 | None:intergenic | 15.0% |
| !!! | TAGAAAATACGAAATTTTAA+AGG | - | chr4_4:35359540-35359559 | None:intergenic | 15.0% |
| !! | ACTAAAACAAATATACATAT+AGG | - | chr4_4:35359651-35359670 | None:intergenic | 15.0% |
| !!! | AATAATTCTATTTTGTACTT+AGG | + | chr4_4:35359869-35359888 | Msa0678800:intron | 15.0% |
| !!! | ATAATTCTATTTTGTACTTA+GGG | + | chr4_4:35359870-35359889 | Msa0678800:intron | 15.0% |
| !! | ATAAATAATAATCTATGTAC+AGG | + | chr4_4:35361045-35361064 | Msa0678800:intron | 15.0% |
| !! | CAACTTAATAATTACAATTT+AGG | + | chr4_4:35362815-35362834 | Msa0678800:three_prime_UTR | 15.0% |
| !!! | GAGTTTTTAGTTATATTAAG+TGG | + | chr4_4:35357023-35357042 | Msa0678800:intron | 20.0% |
| !!! | TTTGAAATTAATTTTAGCAG+GGG | - | chr4_4:35357110-35357129 | None:intergenic | 20.0% |
| !!! | ATTTTGAAATAATTGGATAG+CGG | + | chr4_4:35357141-35357160 | Msa0678800:intron | 20.0% |
| !!! | TACAAATTTTTGGTTAATAG+TGG | + | chr4_4:35357204-35357223 | Msa0678800:intron | 20.0% |
| !!! | ATACTATGATCTAAACTTTT+AGG | - | chr4_4:35357398-35357417 | None:intergenic | 20.0% |
| !! | ATGTTTGTTTAAATTGAAAC+TGG | + | chr4_4:35357502-35357521 | Msa0678800:intron | 20.0% |
| !!! | TCAAATTTGACTAGTTTAAT+GGG | + | chr4_4:35357567-35357586 | Msa0678800:intron | 20.0% |
| !!! | TAGTTAAATTTCTAAAAAGG+GGG | - | chr4_4:35357785-35357804 | None:intergenic | 20.0% |
| !!! | CTAGTTAAATTTCTAAAAAG+GGG | - | chr4_4:35357786-35357805 | None:intergenic | 20.0% |
| !!! | CTCTAGTTAAATTTCTAAAA+AGG | - | chr4_4:35357788-35357807 | None:intergenic | 20.0% |
| !! | AAAATCTATGAAAACTGTAA+TGG | + | chr4_4:35357809-35357828 | Msa0678800:intron | 20.0% |
| !! | ATGTAGAATCAAAAGAAAAT+AGG | - | chr4_4:35358177-35358196 | None:intergenic | 20.0% |
| !!! | CTAGTTTTAAGTTTTAATGA+TGG | + | chr4_4:35358415-35358434 | Msa0678800:intron | 20.0% |
| !! | AAACTATTAATGATAGCAAT+TGG | - | chr4_4:35358529-35358548 | None:intergenic | 20.0% |
| !!! | GATTTATTTTTGCTAGTTAT+TGG | + | chr4_4:35358676-35358695 | Msa0678800:intron | 20.0% |
| !!! | ATGATGAATATTTCTAAAGT+AGG | + | chr4_4:35358720-35358739 | Msa0678800:intron | 20.0% |
| !! | AAAATGAATACTTGTTTATG+TGG | + | chr4_4:35358764-35358783 | Msa0678800:intron | 20.0% |
| !! | AAATGAATACTTGTTTATGT+GGG | + | chr4_4:35358765-35358784 | Msa0678800:intron | 20.0% |
| !! | TAGTTATACATGGATATAAA+TGG | - | chr4_4:35358795-35358814 | None:intergenic | 20.0% |
| !! | TATATATGGATAGTTATACA+TGG | - | chr4_4:35358805-35358824 | None:intergenic | 20.0% |
| !! | GATTGAAAAAAAGAAAATGA+TGG | - | chr4_4:35359103-35359122 | None:intergenic | 20.0% |
| !! | TTAATTTCCATGATTTCATA+TGG | + | chr4_4:35360092-35360111 | Msa0678800:intron | 20.0% |
| !! | ATCATATATATGCAATATCT+CGG | + | chr4_4:35360261-35360280 | Msa0678800:intron | 20.0% |
| !!! | TTTTGTAGATTTTGAAGAAA+AGG | + | chr4_4:35360997-35361016 | Msa0678800:intron | 20.0% |
| !! | ATAGAGGCAATAATAATTAA+GGG | - | chr4_4:35361590-35361609 | None:intergenic | 20.0% |
| !! | TATAGAGGCAATAATAATTA+AGG | - | chr4_4:35361591-35361610 | None:intergenic | 20.0% |
| !!! | ATAAAGGTAAGTTTTTATAG+AGG | - | chr4_4:35361606-35361625 | None:intergenic | 20.0% |
| !!! | TTTTCATTCTAGAACAAATA+AGG | - | chr4_4:35361847-35361866 | None:intergenic | 20.0% |
| !! | TAATTATGCATCATATTATC+TGG | - | chr4_4:35361891-35361910 | None:intergenic | 20.0% |
| !! | ATGACATTTACATTTCAATA+GGG | + | chr4_4:35362125-35362144 | Msa0678800:intron | 20.0% |
| !!! | TGTGTTTTAGGAAAATTCTT+TGG | + | chr4_4:35357053-35357072 | Msa0678800:intron | 25.0% |
| !!! | ATTTTGAGTTTTGACAATAC+TGG | + | chr4_4:35357301-35357320 | Msa0678800:intron | 25.0% |
| !!! | TTTTGAAATTTTGGGTGATT+GGG | + | chr4_4:35357462-35357481 | Msa0678800:intron | 25.0% |
| !!! | GTCAAATTTGACTAGTTTAA+TGG | + | chr4_4:35357566-35357585 | Msa0678800:intron | 25.0% |
| !!! | CAAATTTGACTAGTTTAATG+GGG | + | chr4_4:35357568-35357587 | Msa0678800:intron | 25.0% |
| ! | AAACTAATTCCATAATACCT+AGG | + | chr4_4:35357676-35357695 | Msa0678800:intron | 25.0% |
| ! | TTGTGTAAACAGTTATCAAT+TGG | - | chr4_4:35357733-35357752 | None:intergenic | 25.0% |
| ! | TGATAACTGTTTACACAAAA+AGG | + | chr4_4:35357735-35357754 | Msa0678800:intron | 25.0% |
| !! | AGTTAAATTTCTAAAAAGGG+GGG | - | chr4_4:35357784-35357803 | None:intergenic | 25.0% |
| !! | TTTTATACTCGTGTGATATA+TGG | + | chr4_4:35358095-35358114 | Msa0678800:intron | 25.0% |
| ! | TGCAATCAAAGAAACAAAAT+AGG | - | chr4_4:35358123-35358142 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTCTTTGATTGCA+TGG | + | chr4_4:35358123-35358142 | Msa0678800:intron | 25.0% |
| ! | CTTCAATATTTGCTTAAATC+TGG | + | chr4_4:35358243-35358262 | Msa0678800:intron | 25.0% |
| ! | AAATAGTAGATGAAGTTTCT+AGG | - | chr4_4:35358645-35358664 | None:intergenic | 25.0% |
| !!! | ATCTACTATTTTCTAGCTAT+GGG | + | chr4_4:35358654-35358673 | Msa0678800:intron | 25.0% |
| ! | AAATCACAATCCATACAATA+TGG | - | chr4_4:35358905-35358924 | None:intergenic | 25.0% |
| ! | AGTAGAAAAACTAGTAAAAG+TGG | - | chr4_4:35359002-35359021 | None:intergenic | 25.0% |
| ! | CACATGTTTGATGAATAAAA+TGG | - | chr4_4:35359146-35359165 | None:intergenic | 25.0% |
| ! | TGATTTCTCTCATTTGTTTA+AGG | + | chr4_4:35359220-35359239 | Msa0678800:intron | 25.0% |
| ! | GATTTCTCTCATTTGTTTAA+GGG | + | chr4_4:35359221-35359240 | Msa0678800:intron | 25.0% |
| !! | TTCAATTCGTTGTGATTTTA+GGG | + | chr4_4:35359287-35359306 | Msa0678800:intron | 25.0% |
| !!! | CATTAAGCTTTAAAGTTTCT+TGG | - | chr4_4:35359585-35359604 | None:intergenic | 25.0% |
| ! | CAAGAATGAAATTGAATTTC+TGG | + | chr4_4:35359618-35359637 | Msa0678800:intron | 25.0% |
| ! | AACATAAAAAGGTGATTTCT+TGG | - | chr4_4:35359759-35359778 | None:intergenic | 25.0% |
| ! | ATCATGGAAATTAACTTCAT+TGG | - | chr4_4:35360086-35360105 | None:intergenic | 25.0% |
| !! | ATTTTCTCCATATGAAATCA+TGG | - | chr4_4:35360102-35360121 | None:intergenic | 25.0% |
| ! | AGTGTTGCATTTATTATCAT+GGG | - | chr4_4:35360172-35360191 | None:intergenic | 25.0% |
| !! | AAGTGTTGCATTTATTATCA+TGG | - | chr4_4:35360173-35360192 | None:intergenic | 25.0% |
| !!! | TTTAGAACTTTTGTGTGATT+GGG | + | chr4_4:35360323-35360342 | Msa0678800:intron | 25.0% |
| ! | AATTTAGCAAGTTTGCATAT+TGG | + | chr4_4:35360390-35360409 | Msa0678800:intron | 25.0% |
| ! | TTGAAGAAATGGTTATGAAT+TGG | - | chr4_4:35360568-35360587 | None:intergenic | 25.0% |
| !!! | CAAAACTACTTTTGAAGAAA+TGG | - | chr4_4:35360579-35360598 | None:intergenic | 25.0% |
| !! | CATTTCTTCAAAAGTAGTTT+TGG | + | chr4_4:35360577-35360596 | Msa0678800:intron | 25.0% |
| ! | TTAAATGACTAGGTACAATT+AGG | - | chr4_4:35360668-35360687 | None:intergenic | 25.0% |
| ! | TGTATCTAACTTAAATGACT+AGG | - | chr4_4:35360678-35360697 | None:intergenic | 25.0% |
| ! | TATAACAGGCATAACATATA+AGG | - | chr4_4:35360720-35360739 | None:intergenic | 25.0% |
| ! | GTAAGGACTTATAATATAAC+AGG | - | chr4_4:35360734-35360753 | None:intergenic | 25.0% |
| ! | ATTATAAGTCCTTACAAAAC+CGG | + | chr4_4:35360739-35360758 | Msa0678800:intron | 25.0% |
| ! | TAATCTATGTACAGGAAATT+AGG | + | chr4_4:35361053-35361072 | Msa0678800:intron | 25.0% |
| ! | TCTAGATTACCTAAACATAA+AGG | + | chr4_4:35361110-35361129 | Msa0678800:intron | 25.0% |
| ! | AAAGTAGTTCCTTTATGTTT+AGG | - | chr4_4:35361122-35361141 | None:intergenic | 25.0% |
| ! | TAACAATCCTAACTAAAAAC+TGG | + | chr4_4:35361209-35361228 | Msa0678800:intron | 25.0% |
| !! | AAGAAAAAGCATGAAAATTG+TGG | - | chr4_4:35361237-35361256 | None:intergenic | 25.0% |
| !!! | CCAAAATAGATTTTAATCAC+AGG | - | chr4_4:35361435-35361454 | None:intergenic | 25.0% |
| !! | CCTGTGATTAAAATCTATTT+TGG | + | chr4_4:35361432-35361451 | Msa0678800:intron | 25.0% |
| !!! | ATTTTGGAATTTGAATGATG+TGG | + | chr4_4:35361448-35361467 | Msa0678800:intron | 25.0% |
| !!! | TTTTGGAATTTGAATGATGT+GGG | + | chr4_4:35361449-35361468 | Msa0678800:intron | 25.0% |
| ! | AAACTATATTTCGTTCAAGA+TGG | - | chr4_4:35361814-35361833 | None:intergenic | 25.0% |
| ! | ACTCAATTTGCAGATAATAA+AGG | - | chr4_4:35362075-35362094 | None:intergenic | 25.0% |
| ! | CAAATTGAGTCTAATCTATT+TGG | + | chr4_4:35362085-35362104 | Msa0678800:intron | 25.0% |
| ! | GATGACATTTACATTTCAAT+AGG | + | chr4_4:35362124-35362143 | Msa0678800:intron | 25.0% |
| ! | GTATATCATGTAAAAAAGCA+AGG | - | chr4_4:35362375-35362394 | None:intergenic | 25.0% |
| ! | TTACATGATATACATGAAAG+TGG | + | chr4_4:35362382-35362401 | Msa0678800:CDS | 25.0% |
| ! | TACATGATATACATGAAAGT+GGG | + | chr4_4:35362383-35362402 | Msa0678800:CDS | 25.0% |
| GAATTGAGAGAATAGAACAA+TGG | - | chr4_4:35356498-35356517 | None:intergenic | 30.0% | |
| !!! | GAAGAACTTGGATTTTGATT+TGG | - | chr4_4:35356560-35356579 | None:intergenic | 30.0% |
| AGCTTATTATCCAGATTCTT+AGG | - | chr4_4:35356913-35356932 | None:intergenic | 30.0% | |
| TAGTACAAAACAAAACTACG+AGG | - | chr4_4:35357081-35357100 | None:intergenic | 30.0% | |
| !!! | GTAGTTTTGTTTTGTACTAC+TGG | + | chr4_4:35357082-35357101 | Msa0678800:intron | 30.0% |
| ATACTGTTATGTAATTGAGC+TGG | + | chr4_4:35357439-35357458 | Msa0678800:intron | 30.0% | |
| !!! | TTGAGCTGGTTTTGAAATTT+TGG | + | chr4_4:35357453-35357472 | Msa0678800:intron | 30.0% |
| !!! | TGAGCTGGTTTTGAAATTTT+GGG | + | chr4_4:35357454-35357473 | Msa0678800:intron | 30.0% |
| !!! | GTTTTGAAATTTTGGGTGAT+TGG | + | chr4_4:35357461-35357480 | Msa0678800:intron | 30.0% |
| ! | GTTAAATTTCTAAAAAGGGG+GGG | - | chr4_4:35357783-35357802 | None:intergenic | 30.0% |
| ATCGTTATTCTGAACAGAAT+GGG | + | chr4_4:35357844-35357863 | Msa0678800:intron | 30.0% | |
| !! | TGATTGCATGGTTGATAAAA+AGG | + | chr4_4:35358135-35358154 | Msa0678800:intron | 30.0% |
| ATAAAAAGGAAGAAGAGGAT+CGG | + | chr4_4:35358149-35358168 | Msa0678800:intron | 30.0% | |
| ACATAGTAGATGAAGTTTCT+AGG | - | chr4_4:35358609-35358628 | None:intergenic | 30.0% | |
| !!! | CATCTACTATTTTCTAGCTA+TGG | + | chr4_4:35358653-35358672 | Msa0678800:intron | 30.0% |
| ATCATGCATTCCATATTGTA+TGG | + | chr4_4:35358892-35358911 | Msa0678800:intron | 30.0% | |
| ! | CTTCAATTCGTTGTGATTTT+AGG | + | chr4_4:35359286-35359305 | Msa0678800:intron | 30.0% |
| ! | TTTTTACTACTCTGTGTTGT+GGG | + | chr4_4:35359393-35359412 | Msa0678800:intron | 30.0% |
| TAAAAAGGTGATTTCTTGGA+GGG | - | chr4_4:35359755-35359774 | None:intergenic | 30.0% | |
| ATAAAAAGGTGATTTCTTGG+AGG | - | chr4_4:35359756-35359775 | None:intergenic | 30.0% | |
| !!! | AGTTTTGGCTGAACATAAAA+AGG | - | chr4_4:35359770-35359789 | None:intergenic | 30.0% |
| AAAATACAGAGAAGAGATAG+AGG | - | chr4_4:35359818-35359837 | None:intergenic | 30.0% | |
| ! | TTTGAAGTAACTGTTAGTAG+TGG | + | chr4_4:35359835-35359854 | Msa0678800:intron | 30.0% |
| ! | TTCACAACATTTTTGCACAT+AGG | - | chr4_4:35360216-35360235 | None:intergenic | 30.0% |
| !! | GAAGTTGATATAAGACTAAG+AGG | + | chr4_4:35360233-35360252 | Msa0678800:intron | 30.0% |
| !!! | ACGTTGTTATTTAGTTTTCC+TGG | + | chr4_4:35360300-35360319 | Msa0678800:intron | 30.0% |
| !! | GTTTAGAACTTTTGTGTGAT+TGG | + | chr4_4:35360322-35360341 | Msa0678800:intron | 30.0% |
| ! | AGGTTTGTTCAAGTTAAAAC+TGG | + | chr4_4:35360365-35360384 | Msa0678800:intron | 30.0% |
| TTAGTTTAATGGGGAAACTT+TGG | + | chr4_4:35360443-35360462 | Msa0678800:intron | 30.0% | |
| TTCAAAATTCCATTGTACCT+AGG | + | chr4_4:35360504-35360523 | Msa0678800:intron | 30.0% | |
| TCAAAATTCCATTGTACCTA+GGG | + | chr4_4:35360505-35360524 | Msa0678800:intron | 30.0% | |
| GTTATGAATTGGATATGCTT+AGG | - | chr4_4:35360557-35360576 | None:intergenic | 30.0% | |
| !!! | TTCAAAAGTAGTTTTGGACA+TGG | + | chr4_4:35360583-35360602 | Msa0678800:intron | 30.0% |
| TATAAGGAAAAGATGTCCAA+CGG | - | chr4_4:35360704-35360723 | None:intergenic | 30.0% | |
| CTTGAGAAGAGATAATAAAG+AGG | - | chr4_4:35360786-35360805 | None:intergenic | 30.0% | |
| GTTTAGGTAATCTAGACTAT+GGG | - | chr4_4:35361106-35361125 | None:intergenic | 30.0% | |
| TGTTTAGGTAATCTAGACTA+TGG | - | chr4_4:35361107-35361126 | None:intergenic | 30.0% | |
| ATGCAAATTACTTAAGCTGA+TGG | + | chr4_4:35361144-35361163 | Msa0678800:intron | 30.0% | |
| ! | CTAGATATCTGAGATATACA+TGG | - | chr4_4:35361260-35361279 | None:intergenic | 30.0% |
| TTCTGTATGAAGCTAAGATA+TGG | + | chr4_4:35361399-35361418 | Msa0678800:intron | 30.0% | |
| GGTTACAGTGATACATTAAT+TGG | + | chr4_4:35361550-35361569 | Msa0678800:intron | 30.0% | |
| ACAGTGATACATTAATTGGT+AGG | + | chr4_4:35361554-35361573 | Msa0678800:intron | 30.0% | |
| ATTTCTAAATCTAATTGCCG+TGG | + | chr4_4:35361933-35361952 | Msa0678800:intron | 30.0% | |
| GATGTAAAAGAACAATTCCA+CGG | - | chr4_4:35361953-35361972 | None:intergenic | 30.0% | |
| ! | TCTTTTACATCAGAGATATC+AGG | + | chr4_4:35361962-35361981 | Msa0678800:intron | 30.0% |
| TCAATTTGCAATAGAATTGC+TGG | + | chr4_4:35362329-35362348 | Msa0678800:CDS | 30.0% | |
| TTGATGAATAGAATACGAAC+TGG | - | chr4_4:35362439-35362458 | None:intergenic | 30.0% | |
| AATTGCACTATACAGATGAT+AGG | - | chr4_4:35362504-35362523 | None:intergenic | 30.0% | |
| AATATGACGAGTTAAGAACA+GGG | - | chr4_4:35362597-35362616 | None:intergenic | 30.0% | |
| AAATATGACGAGTTAAGAAC+AGG | - | chr4_4:35362598-35362617 | None:intergenic | 30.0% | |
| TGTTCTTAACTCGTCATATT+TGG | + | chr4_4:35362597-35362616 | Msa0678800:intron | 30.0% | |
| !!! | TCGTCATATTTGGTTTTCTA+TGG | + | chr4_4:35362607-35362626 | Msa0678800:intron | 30.0% |
| AACAATTGCTTGCAATTTGA+GGG | - | chr4_4:35362922-35362941 | None:intergenic | 30.0% | |
| !! | TTGATTTGGTTGATCTGAGA+AGG | - | chr4_4:35356546-35356565 | None:intergenic | 35.0% |
| GGAAGATGATAAGAAGAACT+TGG | - | chr4_4:35356572-35356591 | None:intergenic | 35.0% | |
| GAGAAAGTTGAAGAAAGAGA+AGG | - | chr4_4:35356598-35356617 | None:intergenic | 35.0% | |
| ATGAGAGAATCAGTACCTAA+GGG | - | chr4_4:35356700-35356719 | None:intergenic | 35.0% | |
| AATGAGAGAATCAGTACCTA+AGG | - | chr4_4:35356701-35356720 | None:intergenic | 35.0% | |
| CAATGGTTTACCTAAGAATC+TGG | + | chr4_4:35356900-35356919 | Msa0678800:CDS | 35.0% | |
| AATCTGGATAATAAGCTTGC+TGG | + | chr4_4:35356916-35356935 | Msa0678800:CDS | 35.0% | |
| TACCAAAGAATTGAACTCGT+TGG | - | chr4_4:35356947-35356966 | None:intergenic | 35.0% | |
| ! | AGTGGAGTGAAATGTGTTTT+AGG | + | chr4_4:35357041-35357060 | Msa0678800:intron | 35.0% |
| TGATTGGGCAAATTTAGTGT+AGG | + | chr4_4:35357477-35357496 | Msa0678800:intron | 35.0% | |
| GATTGGGCAAATTTAGTGTA+GGG | + | chr4_4:35357478-35357497 | Msa0678800:intron | 35.0% | |
| ATTGGGCAAATTTAGTGTAG+GGG | + | chr4_4:35357479-35357498 | Msa0678800:intron | 35.0% | |
| CTAGTTTAATGGGGAAACTT+CGG | + | chr4_4:35357577-35357596 | Msa0678800:intron | 35.0% | |
| GATCGTTATTCTGAACAGAA+TGG | + | chr4_4:35357843-35357862 | Msa0678800:intron | 35.0% | |
| AAATGAGAAACAGGAGAAAG+AGG | - | chr4_4:35357988-35358007 | None:intergenic | 35.0% | |
| ! | TTTCTCATTTTGCAAGGCTA+TGG | + | chr4_4:35357998-35358017 | Msa0678800:intron | 35.0% |
| !!! | TGTCACTTTTATGCTCTTGT+AGG | + | chr4_4:35358058-35358077 | Msa0678800:intron | 35.0% |
| !! | GGTTGATAAAAAGGAAGAAG+AGG | + | chr4_4:35358144-35358163 | Msa0678800:intron | 35.0% |
| AAAACCACATGCATCATGAA+TGG | + | chr4_4:35358272-35358291 | Msa0678800:intron | 35.0% | |
| !! | AAGTTTTTCAGCACAGTATG+TGG | - | chr4_4:35358314-35358333 | None:intergenic | 35.0% |
| ! | TAGATGAAGTTTCTAGGAAG+GGG | - | chr4_4:35358603-35358622 | None:intergenic | 35.0% |
| ! | GTAGATGAAGTTTCTAGGAA+GGG | - | chr4_4:35358604-35358623 | None:intergenic | 35.0% |
| ! | AGTAGATGAAGTTTCTAGGA+AGG | - | chr4_4:35358605-35358624 | None:intergenic | 35.0% |
| ! | TAGATGAAGTTTCTAGGAAG+GGG | - | chr4_4:35358603-35358622 | None:intergenic | 35.0% |
| ! | GTAGATGAAGTTTCTAGGAA+GGG | - | chr4_4:35358604-35358623 | None:intergenic | 35.0% |
| ! | AGTAGATGAAGTTTCTAGGA+AGG | - | chr4_4:35358605-35358624 | None:intergenic | 35.0% |
| ACAGCCATCAGATTAAATCA+AGG | + | chr4_4:35358968-35358987 | Msa0678800:intron | 35.0% | |
| CAGCCATCAGATTAAATCAA+GGG | + | chr4_4:35358969-35358988 | Msa0678800:intron | 35.0% | |
| CTACCCTTGATTTAATCTGA+TGG | - | chr4_4:35358975-35358994 | None:intergenic | 35.0% | |
| ! | TTTTCACTACTCTGTGTTCT+GGG | - | chr4_4:35359029-35359048 | None:intergenic | 35.0% |
| AGAACACAGAGTAGTGAAAA+GGG | + | chr4_4:35359029-35359048 | Msa0678800:intron | 35.0% | |
| !! | TGGATTAGCTACAAGTCTAA+GGG | - | chr4_4:35359083-35359102 | None:intergenic | 35.0% |
| !! | ATGGATTAGCTACAAGTCTA+AGG | - | chr4_4:35359084-35359103 | None:intergenic | 35.0% |
| !! | ATTCGTTGTGATTTTAGGGA+TGG | + | chr4_4:35359291-35359310 | Msa0678800:intron | 35.0% |
| !! | TTCGTTGTGATTTTAGGGAT+GGG | + | chr4_4:35359292-35359311 | Msa0678800:intron | 35.0% |
| ACACTGATGAATCGTGTTTA+AGG | + | chr4_4:35359335-35359354 | Msa0678800:intron | 35.0% | |
| CACTGATGAATCGTGTTTAA+GGG | + | chr4_4:35359336-35359355 | Msa0678800:intron | 35.0% | |
| ACTGATGAATCGTGTTTAAG+GGG | + | chr4_4:35359337-35359356 | Msa0678800:intron | 35.0% | |
| CACAACACAGAGTAGTAAAA+AGG | - | chr4_4:35359394-35359413 | None:intergenic | 35.0% | |
| ! | CTTTTTACTACTCTGTGTTG+TGG | + | chr4_4:35359392-35359411 | Msa0678800:intron | 35.0% |
| AGTGAATCTAGACAGTTGAT+TGG | + | chr4_4:35359436-35359455 | Msa0678800:intron | 35.0% | |
| AGACAGTTGATTGGATCTAA+TGG | + | chr4_4:35359445-35359464 | Msa0678800:intron | 35.0% | |
| !!! | TGTGTGACTGTGTCATTTTT+TGG | + | chr4_4:35359484-35359503 | Msa0678800:intron | 35.0% |
| !! | ATTTTTGAGGGTTTAGTAGG+AGG | - | chr4_4:35359709-35359728 | None:intergenic | 35.0% |
| !! | TGGATTTTTGAGGGTTTAGT+AGG | - | chr4_4:35359712-35359731 | None:intergenic | 35.0% |
| ATAGGTAGTAAAGAGGGAAA+AGG | - | chr4_4:35360198-35360217 | None:intergenic | 35.0% | |
| TTGCACATAGGTAGTAAAGA+GGG | - | chr4_4:35360204-35360223 | None:intergenic | 35.0% | |
| TTTGCACATAGGTAGTAAAG+AGG | - | chr4_4:35360205-35360224 | None:intergenic | 35.0% | |
| !! | TCACACAAAAGTTCTAAACC+AGG | - | chr4_4:35360321-35360340 | None:intergenic | 35.0% |
| !!! | ATTGGGCAAGTTTTGAGTAT+GGG | + | chr4_4:35360340-35360359 | Msa0678800:intron | 35.0% |
| GTACATGACTAGGTACAATT+AGG | - | chr4_4:35360644-35360663 | None:intergenic | 35.0% | |
| ACAATTAGGTGTACATGACT+AGG | - | chr4_4:35360654-35360673 | None:intergenic | 35.0% | |
| GAGAAGAGATAATAAAGAGG+AGG | - | chr4_4:35360783-35360802 | None:intergenic | 35.0% | |
| CTAAGCAAAGGTTGCAATTT+AGG | + | chr4_4:35360885-35360904 | Msa0678800:intron | 35.0% | |
| !!! | TGTGGTTCCAGTTTTTAGTT+AGG | - | chr4_4:35361219-35361238 | None:intergenic | 35.0% |
| !!! | ACCTCTCAGACATGATTTTT+TGG | + | chr4_4:35361362-35361381 | Msa0678800:intron | 35.0% |
| ACCAAAAAATCATGTCTGAG+AGG | - | chr4_4:35361366-35361385 | None:intergenic | 35.0% | |
| TGTATGAAGCTAAGATATGG+AGG | + | chr4_4:35361402-35361421 | Msa0678800:intron | 35.0% | |
| ATTGCTCCTCAAATTCGTAA+GGG | - | chr4_4:35361507-35361526 | None:intergenic | 35.0% | |
| ! | TGACTATGCTTTAGGTTTAG+CGG | + | chr4_4:35361738-35361757 | Msa0678800:intron | 35.0% |
| TGGTACTAGAATGTATGTCA+AGG | - | chr4_4:35361794-35361813 | None:intergenic | 35.0% | |
| !! | TCTATTTGGCTTTCTTAACG+TGG | + | chr4_4:35362099-35362118 | Msa0678800:intron | 35.0% |
| !!! | TTGTCTCACTGGTTTTACTT+GGG | - | chr4_4:35362241-35362260 | None:intergenic | 35.0% |
| !!! | TTTGTCTCACTGGTTTTACT+TGG | - | chr4_4:35362242-35362261 | None:intergenic | 35.0% |
| ! | GATATACATGAAAGTGGGTT+TGG | + | chr4_4:35362388-35362407 | Msa0678800:CDS | 35.0% |
| TAGAATACGAACTGGTAGAA+TGG | - | chr4_4:35362431-35362450 | None:intergenic | 35.0% | |
| ACTATACAGATGATAGGACA+TGG | - | chr4_4:35362498-35362517 | None:intergenic | 35.0% | |
| ATGTCATTAGGAGTTCCATT+AGG | + | chr4_4:35362757-35362776 | Msa0678800:three_prime_UTR | 35.0% | |
| AAAACACATCACCGAAGTTT+CGG | - | chr4_4:35362889-35362908 | None:intergenic | 35.0% | |
| ACAATTGCTTGCAATTTGAG+GGG | - | chr4_4:35362921-35362940 | None:intergenic | 35.0% | |
| CAACAATTGCTTGCAATTTG+AGG | - | chr4_4:35362923-35362942 | None:intergenic | 35.0% | |
| AGTTGAAGAAAGAGAAGGAG+AGG | - | chr4_4:35356593-35356612 | None:intergenic | 40.0% | |
| TAAACCATTGACATGTCCCT+TGG | - | chr4_4:35356890-35356909 | None:intergenic | 40.0% | |
| TGCCAACGAGTTCAATTCTT+TGG | + | chr4_4:35356942-35356961 | Msa0678800:CDS | 40.0% | |
| TCACGAACACCTAGGTATTA+TGG | - | chr4_4:35357688-35357707 | None:intergenic | 40.0% | |
| AAACTCAATCACGAACACCT+AGG | - | chr4_4:35357696-35357715 | None:intergenic | 40.0% | |
| !! | CTCCTGTTTCTCATTTTGCA+AGG | + | chr4_4:35357992-35358011 | Msa0678800:intron | 40.0% |
| AGCCTTGCAAAATGAGAAAC+AGG | - | chr4_4:35357997-35358016 | None:intergenic | 40.0% | |
| ATGCATCATGAATGGAGCTT+AGG | + | chr4_4:35358280-35358299 | Msa0678800:intron | 40.0% | |
| !! | TGATGGATGCTTTTCCATGT+TGG | + | chr4_4:35358432-35358451 | Msa0678800:intron | 40.0% |
| ! | GATGGATGCTTTTCCATGTT+GGG | + | chr4_4:35358433-35358452 | Msa0678800:intron | 40.0% |
| AACAAGCATACAACCCAACA+TGG | - | chr4_4:35358449-35358468 | None:intergenic | 40.0% | |
| ! | CTTTTCACTACTCTGTGTTC+TGG | - | chr4_4:35359030-35359049 | None:intergenic | 40.0% |
| CAGAACACAGAGTAGTGAAA+AGG | + | chr4_4:35359028-35359047 | Msa0678800:intron | 40.0% | |
| GACCTGCTGTGTTGAAATTT+GGG | - | chr4_4:35359261-35359280 | None:intergenic | 40.0% | |
| TGACCTGCTGTGTTGAAATT+TGG | - | chr4_4:35359262-35359281 | None:intergenic | 40.0% | |
| AATCGTGTTTAAGGGGTTCA+CGG | + | chr4_4:35359344-35359363 | Msa0678800:intron | 40.0% | |
| !! | CTTGATTTTAAGGAAGTGGG+TGG | - | chr4_4:35359732-35359751 | None:intergenic | 40.0% |
| !! | GGGCTTGATTTTAAGGAAGT+GGG | - | chr4_4:35359735-35359754 | None:intergenic | 40.0% |
| !! | AGGGCTTGATTTTAAGGAAG+TGG | - | chr4_4:35359736-35359755 | None:intergenic | 40.0% |
| ! | TCTTGGAGGGCTTGATTTTA+AGG | - | chr4_4:35359742-35359761 | None:intergenic | 40.0% |
| AGAAGAGATAGAGGACAATG+AGG | - | chr4_4:35359809-35359828 | None:intergenic | 40.0% | |
| TGTACTTAGGGAAGTTGTGA+TGG | + | chr4_4:35359882-35359901 | Msa0678800:intron | 40.0% | |
| ATCTGATAGCAGGGAAAAAG+AGG | + | chr4_4:35359912-35359931 | Msa0678800:intron | 40.0% | |
| TGTTCTGTAGTGTTTAGCAG+AGG | + | chr4_4:35359999-35360018 | Msa0678800:intron | 40.0% | |
| GTTCTGTAGTGTTTAGCAGA+GGG | + | chr4_4:35360000-35360019 | Msa0678800:intron | 40.0% | |
| CAGTGAAATCATGGAAACGT+GGG | - | chr4_4:35360144-35360163 | None:intergenic | 40.0% | |
| ACAGTGAAATCATGGAAACG+TGG | - | chr4_4:35360145-35360164 | None:intergenic | 40.0% | |
| TGGGCATAACAGTGAAATCA+TGG | - | chr4_4:35360153-35360172 | None:intergenic | 40.0% | |
| !!! | GATTGGGCAAGTTTTGAGTA+TGG | + | chr4_4:35360339-35360358 | Msa0678800:intron | 40.0% |
| ! | ATGGGGAAACTTTGGCTTAA+TGG | + | chr4_4:35360451-35360470 | Msa0678800:intron | 40.0% |
| ! | TGGGGAAACTTTGGCTTAAT+GGG | + | chr4_4:35360452-35360471 | Msa0678800:intron | 40.0% |
| TGGCTTAATGGGAGATTCAT+CGG | + | chr4_4:35360463-35360482 | Msa0678800:intron | 40.0% | |
| !!! | AGTAGTTTTGGACATGGATG+TGG | + | chr4_4:35360589-35360608 | Msa0678800:intron | 40.0% |
| !!! | GTAGTTTTGGACATGGATGT+GGG | + | chr4_4:35360590-35360609 | Msa0678800:intron | 40.0% |
| TGTGCACACAACTAGTTAGA+AGG | - | chr4_4:35360621-35360640 | None:intergenic | 40.0% | |
| TAAGTTAGATACACCTCCGT+TGG | + | chr4_4:35360685-35360704 | Msa0678800:intron | 40.0% | |
| ! | AGAGTACTATCTATCCGATG+TGG | + | chr4_4:35360804-35360823 | Msa0678800:intron | 40.0% |
| GAGTACTATCTATCCGATGT+GGG | + | chr4_4:35360805-35360824 | Msa0678800:intron | 40.0% | |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | - | chr4_4:35360842-35360861 | None:intergenic | 40.0% |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | - | chr4_4:35360843-35360862 | None:intergenic | 40.0% |
| AGGTTGCAATTTAGGTGACT+AGG | + | chr4_4:35360893-35360912 | Msa0678800:intron | 40.0% | |
| GGTTGCAATTTAGGTGACTA+GGG | + | chr4_4:35360894-35360913 | Msa0678800:intron | 40.0% | |
| GTTGCAATTTAGGTGACTAG+GGG | + | chr4_4:35360895-35360914 | Msa0678800:intron | 40.0% | |
| GCTAATGCATGATGCTTACT+AGG | + | chr4_4:35360963-35360982 | Msa0678800:intron | 40.0% | |
| AGCTACTCTTCATTTCTCTC+TGG | + | chr4_4:35361076-35361095 | Msa0678800:intron | 40.0% | |
| CAAATTCGTAAGGGCAACAT+AGG | - | chr4_4:35361498-35361517 | None:intergenic | 40.0% | |
| ATGTTGCCCTTACGAATTTG+AGG | + | chr4_4:35361498-35361517 | Msa0678800:intron | 40.0% | |
| GATTGCTCCTCAAATTCGTA+AGG | - | chr4_4:35361508-35361527 | None:intergenic | 40.0% | |
| !! | TGAAAGTGACACTGTTTCTG+CGG | + | chr4_4:35361529-35361548 | Msa0678800:intron | 40.0% |
| AAACCTAAAGCATAGTCACG+CGG | - | chr4_4:35361736-35361755 | None:intergenic | 40.0% | |
| AACCAAGAGTCCAATGCTAT+TGG | + | chr4_4:35362043-35362062 | Msa0678800:CDS | 40.0% | |
| AAGGAACTCACCAATAGCAT+TGG | - | chr4_4:35362056-35362075 | None:intergenic | 40.0% | |
| ATGGCAAGAAACATTGAGAG+AGG | + | chr4_4:35362161-35362180 | Msa0678800:CDS | 40.0% | |
| AAGAAACATTGAGAGAGGTG+TGG | + | chr4_4:35362166-35362185 | Msa0678800:CDS | 40.0% | |
| ! | AGAAACATTGAGAGAGGTGT+GGG | + | chr4_4:35362167-35362186 | Msa0678800:CDS | 40.0% |
| CAGGAAGATGAGGAGATAAT+GGG | - | chr4_4:35362280-35362299 | None:intergenic | 40.0% | |
| ACAGGAAGATGAGGAGATAA+TGG | - | chr4_4:35362281-35362300 | None:intergenic | 40.0% | |
| ! | TACATGAAAGTGGGTTTGGT+TGG | + | chr4_4:35362392-35362411 | Msa0678800:CDS | 40.0% |
| GAACTGGTAGAATGGATCAA+AGG | - | chr4_4:35362423-35362442 | None:intergenic | 40.0% | |
| AAATCTCAACAGCAAGTAGG+TGG | - | chr4_4:35362466-35362485 | None:intergenic | 40.0% | |
| CAGAAATCTCAACAGCAAGT+AGG | - | chr4_4:35362469-35362488 | None:intergenic | 40.0% | |
| CTCAGAATCAAACACTGTTC+AGG | - | chr4_4:35362565-35362584 | None:intergenic | 40.0% | |
| CTGAACAGTGTTTGATTCTG+AGG | + | chr4_4:35362563-35362582 | Msa0678800:three_prime_UTR | 40.0% | |
| !! | TTCAAACCTTGCTTTTGACG+TGG | + | chr4_4:35362667-35362686 | Msa0678800:intron | 40.0% |
| ACGTGTAATGTCATCCTTTC+AGG | + | chr4_4:35362694-35362713 | Msa0678800:intron | 40.0% | |
| GCAAACAAGTTTCACCTGAA+AGG | - | chr4_4:35362711-35362730 | None:intergenic | 40.0% | |
| CTTGTTTGCTTCAACCATGT+TGG | + | chr4_4:35362722-35362741 | Msa0678800:three_prime_UTR | 40.0% | |
| CATGCTTTCCACATGTCATT+AGG | + | chr4_4:35362745-35362764 | Msa0678800:three_prime_UTR | 40.0% | |
| ATGGAACTCCTAATGACATG+TGG | - | chr4_4:35362756-35362775 | None:intergenic | 40.0% | |
| AGCTCATTCACATTGCCTAA+TGG | - | chr4_4:35362775-35362794 | None:intergenic | 40.0% | |
| ! | CTGTTTTCCATCCGAAACTT+CGG | + | chr4_4:35362875-35362894 | Msa0678800:three_prime_UTR | 40.0% |
| AATTGCTTGCAATTTGAGGG+GGG | - | chr4_4:35362919-35362938 | None:intergenic | 40.0% | |
| CAATTGCTTGCAATTTGAGG+GGG | - | chr4_4:35362920-35362939 | None:intergenic | 40.0% | |
| ACAAAGAGAGAGAGATCGAC+GGG | - | chr4_4:35356453-35356472 | None:intergenic | 45.0% | |
| CACAAAGAGAGAGAGATCGA+CGG | - | chr4_4:35356454-35356473 | None:intergenic | 45.0% | |
| TGATCTGAGAAGGCAAGACA+TGG | - | chr4_4:35356536-35356555 | None:intergenic | 45.0% | |
| ATCAGTACCTAAGGGAAGAG+TGG | - | chr4_4:35356692-35356711 | None:intergenic | 45.0% | |
| AGCGGATGAAAACTCTACCA+AGG | + | chr4_4:35356870-35356889 | Msa0678800:intron | 45.0% | |
| GCGGATGAAAACTCTACCAA+GGG | + | chr4_4:35356871-35356890 | Msa0678800:intron | 45.0% | |
| TCTACCAAGGGACATGTCAA+TGG | + | chr4_4:35356883-35356902 | Msa0678800:CDS | 45.0% | |
| CCAGGTAGTAAATCGGTCAA+AGG | - | chr4_4:35357345-35357364 | None:intergenic | 45.0% | |
| ! | CCTTTGACCGATTTACTACC+TGG | + | chr4_4:35357342-35357361 | Msa0678800:intron | 45.0% |
| ! | TTGACCGATTTACTACCTGG+CGG | + | chr4_4:35357345-35357364 | Msa0678800:intron | 45.0% |
| TTTGCCGCCAGGTAGTAAAT+CGG | - | chr4_4:35357352-35357371 | None:intergenic | 45.0% | |
| ! | TTCACAACATTTTTGCCGCC+AGG | - | chr4_4:35357363-35357382 | None:intergenic | 45.0% |
| ! | ATGGGGAAACTTCGGTTTGA+TGG | + | chr4_4:35357585-35357604 | Msa0678800:intron | 45.0% |
| ! | TGGGGAAACTTCGGTTTGAT+GGG | + | chr4_4:35357586-35357605 | Msa0678800:intron | 45.0% |
| ! | TCGGTTTGATGGGAGATTCA+TGG | + | chr4_4:35357596-35357615 | Msa0678800:intron | 45.0% |
| CGGTTTGATGGGAGATTCAT+GGG | + | chr4_4:35357597-35357616 | Msa0678800:intron | 45.0% | |
| GTTCAGAATAACGATCACGC+AGG | - | chr4_4:35357839-35357858 | None:intergenic | 45.0% | |
| AGCTCCATTCATGATGCATG+TGG | - | chr4_4:35358279-35358298 | None:intergenic | 45.0% | |
| !!! | GTCATCTGCTGCTTGTTTTG+TGG | + | chr4_4:35358381-35358400 | Msa0678800:intron | 45.0% |
| TCTGTGTGTATGCACTACAG+TGG | + | chr4_4:35358468-35358487 | Msa0678800:intron | 45.0% | |
| CTGTGTGTATGCACTACAGT+GGG | + | chr4_4:35358469-35358488 | Msa0678800:intron | 45.0% | |
| TGTGTGTATGCACTACAGTG+GGG | + | chr4_4:35358470-35358489 | Msa0678800:intron | 45.0% | |
| GTCAGACTGTCTGCTGTTAT+TGG | + | chr4_4:35358492-35358511 | Msa0678800:intron | 45.0% | |
| AACATCACAGCTAGCAGAAC+TGG | - | chr4_4:35358561-35358580 | None:intergenic | 45.0% | |
| TAACGAACGAGGATGAACAG+TGG | - | chr4_4:35359058-35359077 | None:intergenic | 45.0% | |
| CACCCAAATTTCAACACAGC+AGG | + | chr4_4:35359256-35359275 | Msa0678800:intron | 45.0% | |
| !! | GTTGTGATTTTAGGGATGGG+TGG | + | chr4_4:35359295-35359314 | Msa0678800:intron | 45.0% |
| ! | GATGGGTGGCTAATGTTTTG+TGG | + | chr4_4:35359309-35359328 | Msa0678800:intron | 45.0% |
| ACTACTCTGTGTTGTGGGTT+AGG | + | chr4_4:35359398-35359417 | Msa0678800:intron | 45.0% | |
| !! | GGAAGTGGGTGGATTTTTGA+GGG | - | chr4_4:35359721-35359740 | None:intergenic | 45.0% |
| !! | AGGAAGTGGGTGGATTTTTG+AGG | - | chr4_4:35359722-35359741 | None:intergenic | 45.0% |
| ! | GGAGGAAGTGGAACAAGTTT+TGG | - | chr4_4:35359785-35359804 | None:intergenic | 45.0% |
| AGAGATAGAGGACAATGAGG+AGG | - | chr4_4:35359806-35359825 | None:intergenic | 45.0% | |
| TGGTGTCTACATCTGATAGC+AGG | + | chr4_4:35359902-35359921 | Msa0678800:intron | 45.0% | |
| GGTGTCTACATCTGATAGCA+GGG | + | chr4_4:35359903-35359922 | Msa0678800:intron | 45.0% | |
| CAGTCGTTTGAGAGGAAGTT+GGG | + | chr4_4:35359939-35359958 | Msa0678800:intron | 45.0% | |
| AGTCGTTTGAGAGGAAGTTG+GGG | + | chr4_4:35359940-35359959 | Msa0678800:intron | 45.0% | |
| !!! | GCAAGTTTTGAGTATGGGTG+AGG | + | chr4_4:35360345-35360364 | Msa0678800:intron | 45.0% |
| ACAAACAGCCCTAGGTACAA+TGG | - | chr4_4:35360516-35360535 | None:intergenic | 45.0% | |
| ACTTGATCACAAACAGCCCT+AGG | - | chr4_4:35360524-35360543 | None:intergenic | 45.0% | |
| ! | TTTTGGACATGGATGTGGGT+TGG | + | chr4_4:35360594-35360613 | Msa0678800:intron | 45.0% |
| AAGGAAAAGATGTCCAACGG+AGG | - | chr4_4:35360701-35360720 | None:intergenic | 45.0% | |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr4_4:35360751-35360770 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | + | chr4_4:35360748-35360767 | Msa0678800:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | - | chr4_4:35360841-35360860 | None:intergenic | 45.0% |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | - | chr4_4:35360844-35360863 | None:intergenic | 45.0% |
| CCTCAAAGCCAACACAATGA+AGG | + | chr4_4:35360841-35360860 | Msa0678800:intron | 45.0% | |
| ! | AGCCAACACAATGAAGGTGT+TGG | + | chr4_4:35360847-35360866 | Msa0678800:intron | 45.0% |
| CTCCAACACCTTCATTGTGT+TGG | - | chr4_4:35360852-35360871 | None:intergenic | 45.0% | |
| !! | CAACACAATGAAGGTGTTGG+AGG | + | chr4_4:35360850-35360869 | Msa0678800:intron | 45.0% |
| CTGCAATGAAGGCTAAGCAA+AGG | + | chr4_4:35360873-35360892 | Msa0678800:intron | 45.0% | |
| ! | ACTGTTTTCACCGAATTCGC+GGG | - | chr4_4:35361316-35361335 | None:intergenic | 45.0% |
| ! | CACTGTTTTCACCGAATTCG+CGG | - | chr4_4:35361317-35361336 | None:intergenic | 45.0% |
| TTCGGTACGTGGTACGAATT+CGG | - | chr4_4:35361701-35361720 | None:intergenic | 45.0% | |
| CACTCGCAACATGTCAAAGA+AGG | - | chr4_4:35361769-35361788 | None:intergenic | 45.0% | |
| CATCAGAGATATCAGGCTCT+TGG | + | chr4_4:35361969-35361988 | Msa0678800:intron | 45.0% | |
| ! | CACCAATAGCATTGGACTCT+TGG | - | chr4_4:35362048-35362067 | None:intergenic | 45.0% |
| ATAGGGACTCAACACTCTGA+TGG | + | chr4_4:35362142-35362161 | Msa0678800:intron | 45.0% | |
| GGCTGATAAACAGGAAGATG+AGG | - | chr4_4:35362290-35362309 | None:intergenic | 45.0% | |
| !! | TGAAAGCGTCGAAGAAAGCT+GGG | - | chr4_4:35362312-35362331 | None:intergenic | 45.0% |
| !! | TTGAAAGCGTCGAAGAAAGC+TGG | - | chr4_4:35362313-35362332 | None:intergenic | 45.0% |
| CAGATGATAGGACATGGCTA+GGG | - | chr4_4:35362492-35362511 | None:intergenic | 45.0% | |
| ACAGATGATAGGACATGGCT+AGG | - | chr4_4:35362493-35362512 | None:intergenic | 45.0% | |
| GTTAGTCCACGTCAAAAGCA+AGG | - | chr4_4:35362676-35362695 | None:intergenic | 45.0% | |
| ! | ATGTGGAAAGCATGCCAACA+TGG | - | chr4_4:35362739-35362758 | None:intergenic | 45.0% |
| ATTGCTTGCAATTTGAGGGG+GGG | - | chr4_4:35362918-35362937 | None:intergenic | 45.0% | |
| !! | ATTAAATTAATTGAAAAAAT+TGG | - | chr4_4:35356727-35356746 | None:intergenic | 5.0% |
| !!! | TAAATTTATTTTGAAATAAT+TGG | + | chr4_4:35357134-35357153 | Msa0678800:intron | 5.0% |
| CAAAGAGAGAGAGATCGACG+GGG | - | chr4_4:35356452-35356471 | None:intergenic | 50.0% | |
| AGTACCTAAGGGAAGAGTGG+TGG | - | chr4_4:35356689-35356708 | None:intergenic | 50.0% | |
| TCTAAAAAGGGGGGGAGACA+TGG | - | chr4_4:35357775-35357794 | None:intergenic | 50.0% | |
| TTGCCTGAGACTCGCACAAA+TGG | + | chr4_4:35357909-35357928 | Msa0678800:intron | 50.0% | |
| ! | GTCTAAGGGCATAACGAACG+AGG | - | chr4_4:35359069-35359088 | None:intergenic | 50.0% |
| ! | GGGTGGCTAATGTTTTGTGG+CGG | + | chr4_4:35359312-35359331 | Msa0678800:intron | 50.0% |
| !! | ACTCTGTGTTGTGGGTTAGG+TGG | + | chr4_4:35359401-35359420 | Msa0678800:intron | 50.0% |
| GATAGAGGACAATGAGGAGG+AGG | - | chr4_4:35359803-35359822 | None:intergenic | 50.0% | |
| ! | GAGGTATCCAGTCGTTTGAG+AGG | + | chr4_4:35359931-35359950 | Msa0678800:intron | 50.0% |
| CCAACTTCCTCTCAAACGAC+TGG | - | chr4_4:35359941-35359960 | None:intergenic | 50.0% | |
| CCAGTCGTTTGAGAGGAAGT+TGG | + | chr4_4:35359938-35359957 | Msa0678800:intron | 50.0% | |
| TTGAGAGGAAGTTGGGGCTT+TGG | + | chr4_4:35359946-35359965 | Msa0678800:intron | 50.0% | |
| ! | GGAAGTTGGGGCTTTGGTTT+AGG | + | chr4_4:35359952-35359971 | Msa0678800:intron | 50.0% |
| ! | TTGGGGCTTTGGTTTAGGCA+AGG | + | chr4_4:35359957-35359976 | Msa0678800:intron | 50.0% |
| ! | TGGGGCTTTGGTTTAGGCAA+GGG | + | chr4_4:35359958-35359977 | Msa0678800:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | + | chr4_4:35360753-35360772 | Msa0678800:intron | 50.0% |
| ! | GGGTGGATTTAGTCCCACAT+CGG | - | chr4_4:35360821-35360840 | None:intergenic | 50.0% |
| GCAATTTAGGTGACTAGGGG+CGG | + | chr4_4:35360898-35360917 | Msa0678800:intron | 50.0% | |
| GGTTCGCATGAACGAATTCG+CGG | - | chr4_4:35361289-35361308 | None:intergenic | 50.0% | |
| TTCACCGAATTCGCGGGAAA+CGG | - | chr4_4:35361310-35361329 | None:intergenic | 50.0% | |
| GAGGTTAGAACGCACGTTCT+GGG | - | chr4_4:35361347-35361366 | None:intergenic | 50.0% | |
| AGAGGTTAGAACGCACGTTC+TGG | - | chr4_4:35361348-35361367 | None:intergenic | 50.0% | |
| TCAGAATTCGCTTCGGTACG+TGG | - | chr4_4:35361712-35361731 | None:intergenic | 50.0% | |
| ACGCGGTTCAGAATTCGCTT+CGG | - | chr4_4:35361719-35361738 | None:intergenic | 50.0% | |
| GAACCGCGTGACTATGCTTT+AGG | + | chr4_4:35361730-35361749 | Msa0678800:intron | 50.0% | |
| GAGATATCAGGCTCTTGGAC+TGG | + | chr4_4:35361974-35361993 | Msa0678800:intron | 50.0% | |
| ! | TGGACTGGACACTAATGTGC+TGG | + | chr4_4:35361989-35362008 | Msa0678800:CDS | 50.0% |
| ACCAGTGAGACAAAGCAGTC+TGG | + | chr4_4:35362248-35362267 | Msa0678800:CDS | 50.0% | |
| ACCAGACTGCTTTGTCTCAC+TGG | - | chr4_4:35362252-35362271 | None:intergenic | 50.0% | |
| GAAAGCTGGGGCTGATAAAC+AGG | - | chr4_4:35362299-35362318 | None:intergenic | 50.0% | |
| !! | GAAAGCGTCGAAGAAAGCTG+GGG | - | chr4_4:35362311-35362330 | None:intergenic | 50.0% |
| AAAGCAAGGTGACAGCAGCT+AGG | - | chr4_4:35362361-35362380 | None:intergenic | 50.0% | |
| CACATCACCGAAGTTTCGGA+TGG | - | chr4_4:35362885-35362904 | None:intergenic | 50.0% | |
| AGAGAGAGATCGACGGGGTT+GGG | - | chr4_4:35356447-35356466 | None:intergenic | 55.0% | |
| ACCACCACCACTCTTCCCTT+AGG | + | chr4_4:35356682-35356701 | Msa0678800:CDS | 55.0% | |
| ACCTAAGGGAAGAGTGGTGG+TGG | - | chr4_4:35356686-35356705 | None:intergenic | 55.0% | |
| !! | GTGCCATTTGTGCGAGTCTC+AGG | - | chr4_4:35357915-35357934 | None:intergenic | 55.0% |
| CGTGTTTAAGGGGTTCACGG+AGG | + | chr4_4:35359347-35359366 | Msa0678800:intron | 55.0% | |
| GGACAATGAGGAGGAGGAAG+TGG | - | chr4_4:35359797-35359816 | None:intergenic | 55.0% | |
| GCACTCCTCACCTTACAAGC+CGG | - | chr4_4:35360761-35360780 | None:intergenic | 55.0% | |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | - | chr4_4:35360838-35360857 | None:intergenic | 55.0% |
| ! | GGTGTTGGAGGCTGCAATGA+AGG | + | chr4_4:35360862-35360881 | Msa0678800:intron | 55.0% |
| ACTAGGGGCGGACGCAATTA+AGG | + | chr4_4:35360910-35360929 | Msa0678800:intron | 55.0% | |
| CGAACCGTTTCCCGCGAATT+CGG | + | chr4_4:35361303-35361322 | Msa0678800:intron | 55.0% | |
| ! | TAGAACGCACGTTCTGGGCA+TGG | - | chr4_4:35361342-35361361 | None:intergenic | 55.0% |
| ! | CTGGACACTAATGTGCTGGC+TGG | + | chr4_4:35361993-35362012 | Msa0678800:CDS | 55.0% |
| !! | GTGCTGGCTGGAGCTAGATA+CGG | + | chr4_4:35362005-35362024 | Msa0678800:CDS | 55.0% |
| !! | AGGTGTGGGTGCTGACACAT+TGG | + | chr4_4:35362181-35362200 | Msa0678800:CDS | 55.0% |
| !! | GGTGTGGGTGCTGACACATT+GGG | + | chr4_4:35362182-35362201 | Msa0678800:CDS | 55.0% |
| !! | GGGTGCTGACACATTGGGAT+TGG | + | chr4_4:35362187-35362206 | Msa0678800:CDS | 55.0% |
| ! | GCTGACACATTGGGATTGGC+TGG | + | chr4_4:35362191-35362210 | Msa0678800:CDS | 55.0% |
| GAGAGAGATCGACGGGGTTG+GGG | - | chr4_4:35356446-35356465 | None:intergenic | 60.0% | |
| GAGAGAGAGATCGACGGGGT+TGG | - | chr4_4:35356448-35356467 | None:intergenic | 60.0% | |
| TCTTCCATCCCTCGCTCCAC+CGG | + | chr4_4:35356616-35356635 | Msa0678800:CDS | 60.0% | |
| !! | AGGGAAGAGTGGTGGTGGTC+CGG | - | chr4_4:35356681-35356700 | None:intergenic | 60.0% |
| AGGGGCGGACGCAATTAAGG+CGG | + | chr4_4:35360913-35360932 | Msa0678800:intron | 60.0% | |
| AGAGGGATCCGGTGGAGCGA+GGG | - | chr4_4:35356627-35356646 | None:intergenic | 65.0% | |
| !! | GTGGAGGTGTTCTGCTGCGG+CGG | - | chr4_4:35356659-35356678 | None:intergenic | 65.0% |
| !! | CCGGTGGAGGTGTTCTGCTG+CGG | - | chr4_4:35356662-35356681 | None:intergenic | 65.0% |
| CCGCAGCAGAACACCTCCAC+CGG | + | chr4_4:35356659-35356678 | Msa0678800:CDS | 65.0% | |
| !! | GAAGAGTGGTGGTGGTCCGG+TGG | - | chr4_4:35356678-35356697 | None:intergenic | 65.0% |
| ATCGACGGGGTTGGGGCGTG+TGG | - | chr4_4:35356439-35356458 | None:intergenic | 70.0% | |
| GGATCCGGTGGAGCGAGGGA+TGG | - | chr4_4:35356623-35356642 | None:intergenic | 70.0% | |
| GAGAGGGATCCGGTGGAGCG+AGG | - | chr4_4:35356628-35356647 | None:intergenic | 70.0% | |
| AGGTGTTCTGCTGCGGCGGC+GGG | - | chr4_4:35356655-35356674 | None:intergenic | 70.0% | |
| ! | GAGGTGTTCTGCTGCGGCGG+CGG | - | chr4_4:35356656-35356675 | None:intergenic | 70.0% |
| !! | GAGTGGTGGTGGTCCGGTGG+AGG | - | chr4_4:35356675-35356694 | None:intergenic | 70.0% |
| GGGGGGAGAGAGGGATCCGG+TGG | - | chr4_4:35356635-35356654 | None:intergenic | 75.0% | |
| GGCGGGGGGAGAGAGGGATC+CGG | - | chr4_4:35356638-35356657 | None:intergenic | 75.0% | |
| TGTTCTGCTGCGGCGGCGGG+GGG | - | chr4_4:35356652-35356671 | None:intergenic | 75.0% | |
| GTGTTCTGCTGCGGCGGCGG+GGG | - | chr4_4:35356653-35356672 | None:intergenic | 75.0% | |
| GGTGTTCTGCTGCGGCGGCG+GGG | - | chr4_4:35356654-35356673 | None:intergenic | 75.0% | |
| ! | TGCGGCGGCGGGGGGAGAGA+GGG | - | chr4_4:35356644-35356663 | None:intergenic | 80.0% |
| ! | CTGCGGCGGCGGGGGGAGAG+AGG | - | chr4_4:35356645-35356664 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 35356436 | 35362979 | 35356436 | ID=Msa0678800;Name=Msa0678800 |
| chr4_4 | mRNA | 35356436 | 35362979 | 35356436 | ID=Msa0678800-mRNA-1;Parent=Msa0678800;Name=Msa0678800-mRNA-1;_AED=0.04;_eAED=0.04;_QI=99|1|1|1|0.75|0.6|5|307|248 |
| chr4_4 | exon | 35356436 | 35356703 | 35356436 | ID=Msa0678800-mRNA-1:exon:8410;Parent=Msa0678800-mRNA-1 |
| chr4_4 | exon | 35356872 | 35356963 | 35356872 | ID=Msa0678800-mRNA-1:exon:8411;Parent=Msa0678800-mRNA-1 |
| chr4_4 | exon | 35361975 | 35362064 | 35361975 | ID=Msa0678800-mRNA-1:exon:8412;Parent=Msa0678800-mRNA-1 |
| chr4_4 | exon | 35362146 | 35362584 | 35362146 | ID=Msa0678800-mRNA-1:exon:8413;Parent=Msa0678800-mRNA-1 |
| chr4_4 | exon | 35362716 | 35362979 | 35362716 | ID=Msa0678800-mRNA-1:exon:8414;Parent=Msa0678800-mRNA-1 |
| chr4_4 | five_prime_UTR | 35356436 | 35356534 | 35356436 | ID=Msa0678800-mRNA-1:five_prime_utr;Parent=Msa0678800-mRNA-1 |
| chr4_4 | CDS | 35356535 | 35356703 | 35356535 | ID=Msa0678800-mRNA-1:cds;Parent=Msa0678800-mRNA-1 |
| chr4_4 | CDS | 35356872 | 35356963 | 35356872 | ID=Msa0678800-mRNA-1:cds;Parent=Msa0678800-mRNA-1 |
| chr4_4 | CDS | 35361975 | 35362064 | 35361975 | ID=Msa0678800-mRNA-1:cds;Parent=Msa0678800-mRNA-1 |
| chr4_4 | CDS | 35362146 | 35362541 | 35362146 | ID=Msa0678800-mRNA-1:cds;Parent=Msa0678800-mRNA-1 |
| chr4_4 | three_prime_UTR | 35362542 | 35362584 | 35362542 | ID=Msa0678800-mRNA-1:three_prime_utr;Parent=Msa0678800-mRNA-1 |
| chr4_4 | three_prime_UTR | 35362716 | 35362979 | 35362716 | ID=Msa0678800-mRNA-1:three_prime_utr;Parent=Msa0678800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
