Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050380 | A0A072UNM1 | 86.992 | 123 | 4 | 4 | 1 | 122 | 1 | 112 | 7.81e-53 | 171 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0050380 | 0.802779 | 4.772313e-49 | -8.615850e-47 |
| Msa0015390 | Msa0050380 | 0.804195 | 2.427635e-49 | -8.615850e-47 |
| Msa0017070 | Msa0050380 | 0.812783 | 3.563217e-51 | -8.615850e-47 |
| Msa0021210 | Msa0050380 | 0.806814 | 6.850627e-50 | -8.615850e-47 |
| Msa0023840 | Msa0050380 | -0.800511 | 1.392781e-48 | -8.615850e-47 |
| Msa0026910 | Msa0050380 | 0.829670 | 4.521397e-55 | -8.615850e-47 |
| Msa0029850 | Msa0050380 | 0.823745 | 1.173894e-53 | -8.615850e-47 |
| Msa0036920 | Msa0050380 | 0.815813 | 7.627981e-52 | -8.615850e-47 |
| Msa0037880 | Msa0050380 | 0.830420 | 2.967259e-55 | -8.615850e-47 |
| Msa0039330 | Msa0050380 | 0.809899 | 1.505850e-50 | -8.615850e-47 |
| Msa0042920 | Msa0050380 | 0.825028 | 5.861028e-54 | -8.615850e-47 |
| Msa0050380 | Msa0090100 | 0.821943 | 3.085083e-53 | -8.615850e-47 |
| Msa0050380 | Msa0095560 | 0.800561 | 1.360397e-48 | -8.615850e-47 |
| Msa0050380 | Msa0102120 | 0.841923 | 3.540158e-58 | -8.615850e-47 |
| Msa0050380 | Msa0114060 | 0.805535 | 1.273591e-49 | -8.615850e-47 |
| Msa0050380 | Msa0114430 | 0.819746 | 9.880828e-53 | -8.615850e-47 |
| Msa0050380 | Msa0117710 | 0.812214 | 4.745401e-51 | -8.615850e-47 |
| Msa0050380 | Msa0117770 | 0.829522 | 4.912334e-55 | -8.615850e-47 |
| Msa0050380 | Msa0125050 | 0.801446 | 8.972068e-49 | -8.615850e-47 |
| Msa0050380 | Msa0130970 | 0.825510 | 4.506468e-54 | -8.615850e-47 |
| Msa0050380 | Msa0131770 | 0.817736 | 2.824874e-52 | -8.615850e-47 |
| Msa0050380 | Msa0135490 | 0.809601 | 1.746006e-50 | -8.615850e-47 |
| Msa0050380 | Msa0137570 | 0.813287 | 2.762946e-51 | -8.615850e-47 |
| Msa0050380 | Msa0145190 | 0.803274 | 3.770431e-49 | -8.615850e-47 |
| Msa0050380 | Msa0147250 | 0.808035 | 3.773498e-50 | -8.615850e-47 |
| Msa0050380 | Msa0169820 | 0.825861 | 3.720952e-54 | -8.615850e-47 |
| Msa0050380 | Msa0171760 | 0.807840 | 4.152608e-50 | -8.615850e-47 |
| Msa0050380 | Msa0178930 | 0.802048 | 6.749391e-49 | -8.615850e-47 |
| Msa0050380 | Msa0182570 | 0.801168 | 1.022578e-48 | -8.615850e-47 |
| Msa0050380 | Msa0183010 | -0.802060 | 6.709512e-49 | -8.615850e-47 |
| Msa0050380 | Msa0187250 | 0.804681 | 1.921980e-49 | -8.615850e-47 |
| Msa0050380 | Msa0188460 | 0.815216 | 1.035499e-51 | -8.615850e-47 |
| Msa0050380 | Msa0198910 | 0.809224 | 2.103602e-50 | -8.615850e-47 |
| Msa0050380 | Msa0202720 | 0.820679 | 6.037358e-53 | -8.615850e-47 |
| Msa0050380 | Msa0219240 | 0.817430 | 3.311363e-52 | -8.615850e-47 |
| Msa0050380 | Msa0220580 | 0.824075 | 9.823202e-54 | -8.615850e-47 |
| Msa0050380 | Msa0223010 | 0.816093 | 6.604725e-52 | -8.615850e-47 |
| Msa0050380 | Msa0230640 | -0.802436 | 5.616140e-49 | -8.615850e-47 |
| Msa0050380 | Msa0233300 | 0.803468 | 3.436370e-49 | -8.615850e-47 |
| Msa0050380 | Msa0249560 | 0.823782 | 1.150731e-53 | -8.615850e-47 |
| Msa0050380 | Msa0251640 | 0.826896 | 2.109005e-54 | -8.615850e-47 |
| Msa0050380 | Msa0258760 | 0.810447 | 1.147238e-50 | -8.615850e-47 |
| Msa0050380 | Msa0266690 | 0.806481 | 8.056577e-50 | -8.615850e-47 |
| Msa0050380 | Msa0266720 | 0.803052 | 4.189986e-49 | -8.615850e-47 |
| Msa0050380 | Msa0278190 | 0.855609 | 5.624042e-62 | -8.615850e-47 |
| Msa0050380 | Msa0288100 | 0.855722 | 5.211865e-62 | -8.615850e-47 |
| Msa0050380 | Msa0305190 | 0.808323 | 3.276973e-50 | -8.615850e-47 |
| Msa0050380 | Msa0306210 | -0.819219 | 1.302764e-52 | -8.615850e-47 |
| Msa0050380 | Msa0319170 | 0.816011 | 6.887732e-52 | -8.615850e-47 |
| Msa0050380 | Msa0326520 | 0.803621 | 3.193895e-49 | -8.615850e-47 |
| Msa0050380 | Msa0339620 | 0.806312 | 8.745246e-50 | -8.615850e-47 |
| Msa0050380 | Msa0340450 | 0.802042 | 6.767699e-49 | -8.615850e-47 |
| Msa0050380 | Msa0344690 | -0.832339 | 1.000099e-55 | -8.615850e-47 |
| Msa0050380 | Msa0344920 | 0.824797 | 6.645025e-54 | -8.615850e-47 |
| Msa0050380 | Msa0350320 | -0.816776 | 4.645845e-52 | -8.615850e-47 |
| Msa0050380 | Msa0350990 | 0.811254 | 7.674465e-51 | -8.615850e-47 |
| Msa0050380 | Msa0351030 | 0.814528 | 1.471796e-51 | -8.615850e-47 |
| Msa0050380 | Msa0351100 | 0.808173 | 3.527765e-50 | -8.615850e-47 |
| Msa0050380 | Msa0365490 | 0.818833 | 1.594419e-52 | -8.615850e-47 |
| Msa0050380 | Msa0376590 | 0.847443 | 1.152839e-59 | -8.615850e-47 |
| Msa0050380 | Msa0379640 | 0.820334 | 7.247378e-53 | -8.615850e-47 |
| Msa0050380 | Msa0380850 | 0.831166 | 1.947380e-55 | -8.615850e-47 |
| Msa0050380 | Msa0381600 | -0.815113 | 1.091674e-51 | -8.615850e-47 |
| Msa0050380 | Msa0381620 | -0.809088 | 2.249358e-50 | -8.615850e-47 |
| Msa0050380 | Msa0385840 | 0.800577 | 1.350170e-48 | -8.615850e-47 |
| Msa0050380 | Msa0390400 | -0.803537 | 3.324839e-49 | -8.615850e-47 |
| Msa0050380 | Msa0392040 | -0.802974 | 4.349635e-49 | -8.615850e-47 |
| Msa0050380 | Msa0424320 | 0.807427 | 5.082692e-50 | -8.615850e-47 |
| Msa0050380 | Msa0426900 | 0.828358 | 9.398145e-55 | -8.615850e-47 |
| Msa0050380 | Msa0458440 | 0.827354 | 1.638375e-54 | -8.615850e-47 |
| Msa0050380 | Msa0458900 | -0.815481 | 9.043575e-52 | -8.615850e-47 |
| Msa0050380 | Msa0466390 | 0.806713 | 7.196999e-50 | -8.615850e-47 |
| Msa0050380 | Msa0469940 | -0.815250 | 1.017647e-51 | -8.615850e-47 |
| Msa0050380 | Msa0479340 | 0.819528 | 1.107608e-52 | -8.615850e-47 |
| Msa0050380 | Msa0484780 | 0.810484 | 1.126317e-50 | -8.615850e-47 |
| Msa0050380 | Msa0485490 | 0.800800 | 1.216124e-48 | -8.615850e-47 |
| Msa0050380 | Msa0490140 | 0.817911 | 2.579307e-52 | -8.615850e-47 |
| Msa0050380 | Msa0512750 | 0.801257 | 9.804101e-49 | -8.615850e-47 |
| Msa0050380 | Msa0512900 | 0.813113 | 3.016973e-51 | -8.615850e-47 |
| Msa0050380 | Msa0516370 | 0.841661 | 4.150111e-58 | -8.615850e-47 |
| Msa0050380 | Msa0518380 | 0.821380 | 4.164562e-53 | -8.615850e-47 |
| Msa0050380 | Msa0523940 | 0.810029 | 1.412444e-50 | -8.615850e-47 |
| Msa0050380 | Msa0532810 | -0.804199 | 2.422512e-49 | -8.615850e-47 |
| Msa0050380 | Msa0565350 | 0.813306 | 2.735697e-51 | -8.615850e-47 |
| Msa0050380 | Msa0572480 | 0.808496 | 3.010398e-50 | -8.615850e-47 |
| Msa0050380 | Msa0585230 | 0.853235 | 2.731733e-61 | -8.615850e-47 |
| Msa0050380 | Msa0612930 | 0.810218 | 1.285968e-50 | -8.615850e-47 |
| Msa0050380 | Msa0613460 | 0.808480 | 3.033556e-50 | -8.615850e-47 |
| Msa0050380 | Msa0626090 | 0.837185 | 6.033543e-57 | -8.615850e-47 |
| Msa0050380 | Msa0650630 | 0.801883 | 7.296266e-49 | -8.615850e-47 |
| Msa0050380 | Msa0652940 | 0.822333 | 2.506021e-53 | -8.615850e-47 |
| Msa0050380 | Msa0654310 | 0.820618 | 6.237411e-53 | -8.615850e-47 |
| Msa0050380 | Msa0658570 | 0.808456 | 3.069663e-50 | -8.615850e-47 |
| Msa0050380 | Msa0661190 | -0.800599 | 1.336084e-48 | -8.615850e-47 |
| Msa0050380 | Msa0672690 | 0.838249 | 3.217672e-57 | -8.615850e-47 |
| Msa0050380 | Msa0678800 | -0.818162 | 2.263805e-52 | -8.615850e-47 |
| Msa0050380 | Msa0688480 | 0.807909 | 4.013686e-50 | -8.615850e-47 |
| Msa0050380 | Msa0696080 | 0.803867 | 2.839531e-49 | -8.615850e-47 |
| Msa0050380 | Msa0698930 | 0.960314 | 2.034697e-118 | -8.615850e-47 |
| Msa0050380 | Msa0701010 | 0.815597 | 8.521196e-52 | -8.615850e-47 |
| Msa0050380 | Msa0703780 | 0.807487 | 4.936167e-50 | -8.615850e-47 |
| Msa0050380 | Msa0708860 | 0.800373 | 1.486037e-48 | -8.615850e-47 |
| Msa0050380 | Msa0711100 | 0.807741 | 4.358642e-50 | -8.615850e-47 |
| Msa0050380 | Msa0715770 | 0.801965 | 7.018252e-49 | -8.615850e-47 |
| Msa0050380 | Msa0716530 | 0.802385 | 5.751976e-49 | -8.615850e-47 |
| Msa0050380 | Msa0723650 | 0.813671 | 2.274516e-51 | -8.615850e-47 |
| Msa0050380 | Msa0731180 | 0.801283 | 9.686530e-49 | -8.615850e-47 |
| Msa0050380 | Msa0731940 | 0.818193 | 2.226732e-52 | -8.615850e-47 |
| Msa0050380 | Msa0735170 | 0.805558 | 1.259783e-49 | -8.615850e-47 |
| Msa0050380 | Msa0744170 | -0.808944 | 2.414338e-50 | -8.615850e-47 |
| Msa0050380 | Msa0766630 | 0.807235 | 5.582228e-50 | -8.615850e-47 |
| Msa0050380 | Msa0767760 | 0.814312 | 1.642705e-51 | -8.615850e-47 |
| Msa0050380 | Msa0768290 | 0.820057 | 8.388012e-53 | -8.615850e-47 |
| Msa0050380 | Msa0768370 | 0.817876 | 2.626829e-52 | -8.615850e-47 |
| Msa0050380 | Msa0773180 | 0.820357 | 7.157439e-53 | -8.615850e-47 |
| Msa0050380 | Msa0773310 | 0.806853 | 6.722908e-50 | -8.615850e-47 |
| Msa0050380 | Msa0794510 | -0.834648 | 2.653630e-56 | -8.615850e-47 |
| Msa0050380 | Msa0807030 | 0.853193 | 2.809111e-61 | -8.615850e-47 |
| Msa0050380 | Msa0810220 | 0.814070 | 1.857477e-51 | -8.615850e-47 |
| Msa0050380 | Msa0820850 | 0.829079 | 6.292094e-55 | -8.615850e-47 |
| Msa0050380 | Msa0825240 | -0.815517 | 8.875869e-52 | -8.615850e-47 |
| Msa0050380 | Msa0831850 | 0.817995 | 2.468479e-52 | -8.615850e-47 |
| Msa0050380 | Msa0832150 | 0.809718 | 1.647546e-50 | -8.615850e-47 |
| Msa0050380 | Msa0832970 | 0.835673 | 1.463335e-56 | -8.615850e-47 |
| Msa0050380 | Msa0844490 | 0.801933 | 7.125149e-49 | -8.615850e-47 |
| Msa0050380 | Msa0845000 | 0.827193 | 1.790570e-54 | -8.615850e-47 |
| Msa0050380 | Msa0857640 | 0.809061 | 2.279630e-50 | -8.615850e-47 |
| Msa0050380 | Msa0861130 | 0.823758 | 1.165798e-53 | -8.615850e-47 |
| Msa0050380 | Msa0864070 | 0.807201 | 5.673940e-50 | -8.615850e-47 |
| Msa0050380 | Msa0864470 | -0.804425 | 2.173977e-49 | -8.615850e-47 |
| Msa0050380 | Msa0874630 | 0.801922 | 7.163303e-49 | -8.615850e-47 |
| Msa0050380 | Msa0876580 | 0.814255 | 1.691210e-51 | -8.615850e-47 |
| Msa0050380 | Msa0877250 | 0.803927 | 2.759445e-49 | -8.615850e-47 |
| Msa0050380 | Msa0882690 | 0.826216 | 3.063824e-54 | -8.615850e-47 |
| Msa0050380 | Msa0885210 | 0.802311 | 5.958267e-49 | -8.615850e-47 |
| Msa0050380 | Msa0892570 | 0.800053 | 1.726298e-48 | -8.615850e-47 |
| Msa0050380 | Msa0899450 | 0.811008 | 8.679488e-51 | -8.615850e-47 |
| Msa0050380 | Msa0907070 | 0.811891 | 5.579798e-51 | -8.615850e-47 |
| Msa0050380 | Msa0908770 | -0.822676 | 2.085473e-53 | -8.615850e-47 |
| Msa0050380 | Msa0913480 | -0.811119 | 8.211969e-51 | -8.615850e-47 |
| Msa0050380 | Msa0919850 | 0.825301 | 5.050402e-54 | -8.615850e-47 |
| Msa0050380 | Msa0924310 | 0.809243 | 2.083187e-50 | -8.615850e-47 |
| Msa0050380 | Msa0925870 | 0.818878 | 1.557256e-52 | -8.615850e-47 |
| Msa0050380 | Msa0927380 | 0.814570 | 1.440733e-51 | -8.615850e-47 |
| Msa0050380 | Msa0931520 | 0.836296 | 1.016622e-56 | -8.615850e-47 |
| Msa0050380 | Msa0935540 | 0.814429 | 1.547539e-51 | -8.615850e-47 |
| Msa0050380 | Msa0936300 | 0.837609 | 4.699734e-57 | -8.615850e-47 |
| Msa0050380 | Msa0946690 | -0.801467 | 8.882424e-49 | -8.615850e-47 |
| Msa0050380 | Msa0964900 | 0.812610 | 3.888086e-51 | -8.615850e-47 |
| Msa0050380 | Msa0967180 | 0.831720 | 1.422672e-55 | -8.615850e-47 |
| Msa0050380 | Msa0969450 | 0.804309 | 2.298450e-49 | -8.615850e-47 |
| Msa0050380 | Msa0969520 | 0.832291 | 1.027797e-55 | -8.615850e-47 |
| Msa0050380 | Msa0973100 | 0.827884 | 1.222379e-54 | -8.615850e-47 |
| Msa0050380 | Msa0991930 | 0.807305 | 5.394534e-50 | -8.615850e-47 |
| Msa0050380 | Msa0992280 | 0.827324 | 1.665604e-54 | -8.615850e-47 |
| Msa0050380 | Msa0998690 | 0.811301 | 7.496918e-51 | -8.615850e-47 |
| Msa0050380 | Msa0999100 | 0.816187 | 6.292032e-52 | -8.615850e-47 |
| Msa0050380 | Msa1001390 | 0.823704 | 1.199858e-53 | -8.615850e-47 |
| Msa0050380 | Msa1006850 | 0.813900 | 2.025523e-51 | -8.615850e-47 |
| Msa0050380 | Msa1014540 | 0.826817 | 2.202974e-54 | -8.615850e-47 |
| Msa0050380 | Msa1015730 | 0.815128 | 1.083451e-51 | -8.615850e-47 |
| Msa0050380 | Msa1015790 | 0.821215 | 4.546140e-53 | -8.615850e-47 |
| Msa0050380 | Msa1028970 | 0.851477 | 8.655093e-61 | -8.615850e-47 |
| Msa0050380 | Msa1031910 | 0.801766 | 7.713232e-49 | -8.615850e-47 |
| Msa0050380 | Msa1035310 | 0.814848 | 1.250292e-51 | -8.615850e-47 |
| Msa0050380 | Msa1041600 | -0.813976 | 1.948772e-51 | -8.615850e-47 |
| Msa0050380 | Msa1054150 | -0.801165 | 1.024096e-48 | -8.615850e-47 |
| Msa0050380 | Msa1054990 | 0.800695 | 1.277353e-48 | -8.615850e-47 |
| Msa0050380 | Msa1059570 | 0.828791 | 7.384978e-55 | -8.615850e-47 |
| Msa0050380 | Msa1061020 | -0.803838 | 2.879713e-49 | -8.615850e-47 |
| Msa0050380 | Msa1068200 | -0.816869 | 4.426003e-52 | -8.615850e-47 |
| Msa0050380 | Msa1071110 | 0.800138 | 1.658784e-48 | -8.615850e-47 |
| Msa0050380 | Msa1075080 | -0.847881 | 8.735935e-60 | -8.615850e-47 |
| Msa0050380 | Msa1075220 | -0.831245 | 1.861755e-55 | -8.615850e-47 |
| Msa0050380 | Msa1081590 | 0.803310 | 3.705338e-49 | -8.615850e-47 |
| Msa0050380 | Msa1082580 | 0.846976 | 1.548520e-59 | -8.615850e-47 |
| Msa0050380 | Msa1084260 | 0.829479 | 5.030597e-55 | -8.615850e-47 |
| Msa0050380 | Msa1090260 | 0.805393 | 1.364016e-49 | -8.615850e-47 |
| Msa0050380 | Msa1091830 | 0.809661 | 1.694718e-50 | -8.615850e-47 |
| Msa0050380 | Msa1098250 | 0.805916 | 1.059684e-49 | -8.615850e-47 |
| Msa0050380 | Msa1100480 | 0.805507 | 1.291440e-49 | -8.615850e-47 |
| Msa0050380 | Msa1116440 | 0.813035 | 3.137709e-51 | -8.615850e-47 |
| Msa0050380 | Msa1117170 | 0.802318 | 5.938744e-49 | -8.615850e-47 |
| Msa0050380 | Msa1121450 | -0.804540 | 2.056596e-49 | -8.615850e-47 |
| Msa0050380 | Msa1121480 | 0.805559 | 1.258896e-49 | -8.615850e-47 |
| Msa0050380 | Msa1121490 | 0.824069 | 9.857573e-54 | -8.615850e-47 |
| Msa0050380 | Msa1124540 | -0.837042 | 6.563227e-57 | -8.615850e-47 |
| Msa0050380 | Msa1131940 | -0.802803 | 4.716055e-49 | -8.615850e-47 |
| Msa0050380 | Msa1137570 | 0.814426 | 1.550407e-51 | -8.615850e-47 |
| Msa0050380 | Msa1139000 | -0.811089 | 8.334180e-51 | -8.615850e-47 |
| Msa0050380 | Msa1144720 | -0.809692 | 1.669085e-50 | -8.615850e-47 |
| Msa0050380 | Msa1148050 | 0.807246 | 5.550599e-50 | -8.615850e-47 |
| Msa0050380 | Msa1152440 | 0.805440 | 1.333841e-49 | -8.615850e-47 |
| Msa0050380 | Msa1154280 | 0.808481 | 3.031841e-50 | -8.615850e-47 |
| Msa0050380 | Msa1156020 | 0.818768 | 1.649789e-52 | -8.615850e-47 |
| Msa0050380 | Msa1156340 | -0.816586 | 5.123394e-52 | -8.615850e-47 |
| Msa0050380 | Msa1162550 | -0.836011 | 1.201205e-56 | -8.615850e-47 |
| Msa0050380 | Msa1166500 | -0.811823 | 5.774366e-51 | -8.615850e-47 |
| Msa0050380 | Msa1174040 | 0.803031 | 4.231323e-49 | -8.615850e-47 |
| Msa0050380 | Msa1186950 | -0.804266 | 2.345510e-49 | -8.615850e-47 |
| Msa0050380 | Msa1195190 | 0.822077 | 2.872712e-53 | -8.615850e-47 |
| Msa0050380 | Msa1228590 | 0.821612 | 3.681231e-53 | -8.615850e-47 |
| Msa0050380 | Msa1233890 | 0.832529 | 8.974121e-56 | -8.615850e-47 |
| Msa0050380 | Msa1234970 | 0.804877 | 1.749623e-49 | -8.615850e-47 |
| Msa0050380 | Msa1237980 | 0.802746 | 4.845856e-49 | -8.615850e-47 |
| Msa0050380 | Msa1238930 | 0.805855 | 1.091042e-49 | -8.615850e-47 |
| Msa0050380 | Msa1246510 | 0.811259 | 7.656993e-51 | -8.615850e-47 |
| Msa0050380 | Msa1249280 | 0.802966 | 4.366185e-49 | -8.615850e-47 |
| Msa0050380 | Msa1249490 | 0.804495 | 2.101691e-49 | -8.615850e-47 |
| Msa0050380 | Msa1259590 | -0.800958 | 1.128673e-48 | -8.615850e-47 |
| Msa0050380 | Msa1269940 | 0.822355 | 2.476705e-53 | -8.615850e-47 |
| Msa0050380 | Msa1276440 | 0.802746 | 4.846086e-49 | -8.615850e-47 |
| Msa0050380 | Msa1278110 | 0.814504 | 1.489515e-51 | -8.615850e-47 |
| Msa0050380 | Msa1282580 | -0.815055 | 1.124489e-51 | -8.615850e-47 |
| Msa0050380 | Msa1284680 | 0.821685 | 3.541310e-53 | -8.615850e-47 |
| Msa0050380 | Msa1284710 | 0.849065 | 4.106293e-60 | -8.615850e-47 |
| Msa0050380 | Msa1288340 | 0.813657 | 2.290548e-51 | -8.615850e-47 |
| Msa0050380 | Msa1291660 | 0.838605 | 2.604750e-57 | -8.615850e-47 |
| Msa0050380 | Msa1296940 | 0.821344 | 4.244065e-53 | -8.615850e-47 |
| Msa0050380 | Msa1297290 | 0.814896 | 1.219449e-51 | -8.615850e-47 |
| Msa0050380 | Msa1305190 | 0.802797 | 4.731321e-49 | -8.615850e-47 |
| Msa0050380 | Msa1305200 | 0.803595 | 3.234112e-49 | -8.615850e-47 |
| Msa0050380 | Msa1305340 | 0.802897 | 4.511938e-49 | -8.615850e-47 |
| Msa0050380 | Msa1305350 | 0.820141 | 8.023008e-53 | -8.615850e-47 |
| Msa0050380 | Msa1310700 | 0.824167 | 9.346851e-54 | -8.615850e-47 |
| Msa0050380 | Msa1311340 | 0.825896 | 3.649898e-54 | -8.615850e-47 |
| Msa0050380 | Msa1329700 | 0.809184 | 2.145549e-50 | -8.615850e-47 |
| Msa0050380 | Msa1359040 | 0.812683 | 3.746936e-51 | -8.615850e-47 |
| Msa0050380 | Msa1362880 | 0.807149 | 5.819659e-50 | -8.615850e-47 |
| Msa0050380 | Msa1364830 | 0.816847 | 4.476701e-52 | -8.615850e-47 |
| Msa0050380 | Msa1372760 | 0.809030 | 2.313825e-50 | -8.615850e-47 |
| Msa0050380 | Msa1376890 | 0.809569 | 1.773636e-50 | -8.615850e-47 |
| Msa0050380 | Msa1376930 | 0.800851 | 1.187309e-48 | -8.615850e-47 |
| Msa0050380 | Msa1385000 | 0.815763 | 7.825312e-52 | -8.615850e-47 |
| Msa0050380 | Msa1390050 | 0.809883 | 1.517936e-50 | -8.615850e-47 |
| Msa0050380 | Msa1393040 | 0.804190 | 2.433504e-49 | -8.615850e-47 |
| Msa0050380 | Msa1394310 | 0.810666 | 1.029232e-50 | -8.615850e-47 |
| Msa0050380 | Msa1403480 | 0.802671 | 5.023487e-49 | -8.615850e-47 |
| Msa0050380 | Msa1411020 | 0.812466 | 4.180880e-51 | -8.615850e-47 |
| Msa0050380 | Msa1420490 | 0.808144 | 3.577229e-50 | -8.615850e-47 |
| Msa0050380 | Msa1420820 | 0.864747 | 9.734029e-65 | -8.615850e-47 |
| Msa0050380 | Msa1423390 | 0.807597 | 4.676490e-50 | -8.615850e-47 |
| Msa0050380 | Msa1424290 | 0.804386 | 2.214692e-49 | -8.615850e-47 |
| Msa0050380 | Msa1427230 | 0.831815 | 1.347871e-55 | -8.615850e-47 |
| Msa0050380 | Msa1434350 | 0.807156 | 5.799495e-50 | -8.615850e-47 |
| Msa0050380 | Msa1439320 | 0.814703 | 1.345892e-51 | -8.615850e-47 |
| Msa0050380 | Msa1440370 | 0.804865 | 1.759724e-49 | -8.615850e-47 |
| Msa0050380 | Msa1440810 | 0.811376 | 7.220552e-51 | -8.615850e-47 |
| Msa0050380 | Msa1451620 | -0.863083 | 3.206708e-64 | -8.615850e-47 |
| Msa0050380 | Msa1453560 | 0.826805 | 2.217507e-54 | -8.615850e-47 |
| Msa0050380 | Msa1458550 | 0.811198 | 7.892869e-51 | -8.615850e-47 |
| Msa0050380 | Msa1460830 | 0.818391 | 2.008504e-52 | -8.615850e-47 |
| Msa0050380 | Msa1461810 | -0.812082 | 5.071278e-51 | -8.615850e-47 |
| Msa0050380 | Msa1466540 | 0.805335 | 1.402648e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0050380 | MtrunA17_Chr4g0052371 | 86.992 | 123 | 4 | 4 | 1 | 122 | 1 | 112 | 1.50e-56 | 171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 41 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCAGCAGACGATTATTT+TGG | 0.182988 | 1_2:-4270057 | Msa0050380:intron |
| TCCATTGTCCGGAACTCTTT+TGG | 0.290169 | 1_2:-4270362 | Msa0050380:CDS |
| TCAGGATTTAATTGAAATCA+AGG | 0.374856 | 1_2:-4270166 | Msa0050380:intron |
| TGCTGCAAAGCAGGCAGCCA+AGG | 0.380640 | 1_2:-4269991 | Msa0050380:CDS |
| TGAATTTGCCAAAAGAGTTC+CGG | 0.381401 | 1_2:+4270354 | None:intergenic |
| TCCCCTTCCGATTGGGTAGC+CGG | 0.386098 | 1_2:+4270390 | None:intergenic |
| CTTCCGAACTTTAGTTGCCT+TGG | 0.396128 | 1_2:+4269974 | None:intergenic |
| GAGTAAAGCTGCTGCAAAGC+AGG | 0.435629 | 1_2:-4270000 | Msa0050380:CDS |
| ATTAAATCCTGAGGAATGTT+GGG | 0.440220 | 1_2:+4270177 | None:intergenic |
| AATTAAATCCTGAGGAATGT+TGG | 0.444643 | 1_2:+4270176 | None:intergenic |
| CAAGCTTATGATTTCCTCAC+TGG | 0.467518 | 1_2:-4270217 | Msa0050380:CDS |
| GATTTACTCCCCTTCCGATT+GGG | 0.479142 | 1_2:+4270383 | None:intergenic |
| ACGTACGCCGGCTACCCAAT+CGG | 0.500846 | 1_2:-4270397 | Msa0050380:CDS |
| GGATTTACTCCCCTTCCGAT+TGG | 0.503941 | 1_2:+4270382 | None:intergenic |
| CAGCCAAGGCAACTAAAGTT+CGG | 0.506043 | 1_2:-4269977 | Msa0050380:CDS |
| GCAGAAGGGGAAGAAAGTGT+TGG | 0.512031 | 1_2:-4269904 | Msa0050380:CDS |
| GAAGGAGCCCAACATTCCTC+AGG | 0.521672 | 1_2:-4270184 | Msa0050380:CDS |
| ATTGGGTAGCCGGCGTACGT+TGG | 0.539138 | 1_2:+4270400 | None:intergenic |
| GCCAAAAGAGTTCCGGACAA+TGG | 0.540316 | 1_2:+4270361 | None:intergenic |
| AGTAAAATTCATAAGCAGAA+GGG | 0.542068 | 1_2:-4269918 | Msa0050380:CDS |
| AGGGGAGTAAATCCATTGTC+CGG | 0.546668 | 1_2:-4270373 | Msa0050380:CDS |
| GCCGGCTACCCAATCGGAAG+GGG | 0.548832 | 1_2:-4270391 | Msa0050380:CDS |
| GTAAAATTCATAAGCAGAAG+GGG | 0.557860 | 1_2:-4269917 | Msa0050380:CDS |
| AAGTAAAATTCATAAGCAGA+AGG | 0.561096 | 1_2:-4269919 | Msa0050380:CDS |
| TTGATTTCAATTAAATCCTG+AGG | 0.568823 | 1_2:+4270168 | None:intergenic |
| ACGCCGGCTACCCAATCGGA+AGG | 0.586765 | 1_2:-4270393 | Msa0050380:CDS |
| TACTCTGTCGATATTCAGCA+AGG | 0.588341 | 1_2:+4270018 | None:intergenic |
| CGCCGGCTACCCAATCGGAA+GGG | 0.588497 | 1_2:-4270392 | Msa0050380:CDS |
| AAGCAAAATCCAACGTACGC+CGG | 0.639196 | 1_2:-4270409 | Msa0050380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTGATTTCAATTAAATCCTG+AGG | + | chr1_2:4270158-4270177 | None:intergenic | 25.0% |
| ! | TCAGGATTTAATTGAAATCA+AGG | - | chr1_2:4270157-4270176 | Msa0050380:intron | 25.0% |
| ! | AAGTAAAATTCATAAGCAGA+AGG | - | chr1_2:4270404-4270423 | Msa0050380:CDS | 25.0% |
| ! | AGTAAAATTCATAAGCAGAA+GGG | - | chr1_2:4270405-4270424 | Msa0050380:CDS | 25.0% |
| ! | AACTCTTTTGGCAAATTCAA+AGG | - | chr1_2:4269973-4269992 | Msa0050380:CDS | 30.0% |
| ! | ATTCAAAGGCAAGTTTTTCT+CGG | - | chr1_2:4269987-4270006 | Msa0050380:CDS | 30.0% |
| ATATCACTCTTTATACCAAC+AGG | - | chr1_2:4270064-4270083 | Msa0050380:intron | 30.0% | |
| ATTAAATCCTGAGGAATGTT+GGG | + | chr1_2:4270149-4270168 | None:intergenic | 30.0% | |
| AATTAAATCCTGAGGAATGT+TGG | + | chr1_2:4270150-4270169 | None:intergenic | 30.0% | |
| GTAAAATTCATAAGCAGAAG+GGG | - | chr1_2:4270406-4270425 | Msa0050380:CDS | 30.0% | |
| TGAATTTGCCAAAAGAGTTC+CGG | + | chr1_2:4269972-4269991 | None:intergenic | 35.0% | |
| ! | TTCAAAGGCAAGTTTTTCTC+GGG | - | chr1_2:4269988-4270007 | Msa0050380:CDS | 35.0% |
| ! | AAACCAGCAGACGATTATTT+TGG | - | chr1_2:4270266-4270285 | Msa0050380:intron | 35.0% |
| AGAGAATCAGAAGCAAGCAT+GGG | + | chr1_2:4270020-4270039 | None:intergenic | 40.0% | |
| GTGACAATTCGTAATCCTGT+TGG | + | chr1_2:4270082-4270101 | None:intergenic | 40.0% | |
| CAAGCTTATGATTTCCTCAC+TGG | - | chr1_2:4270106-4270125 | Msa0050380:intron | 40.0% | |
| ! | CTTCAACTCTTTTTCCAGTG+AGG | + | chr1_2:4270123-4270142 | None:intergenic | 40.0% |
| CTCACTGGAAAAAGAGTTGA+AGG | - | chr1_2:4270121-4270140 | Msa0050380:intron | 40.0% | |
| TACTCTGTCGATATTCAGCA+AGG | + | chr1_2:4270308-4270327 | None:intergenic | 40.0% | |
| AAGCAAAATCCAACGTACGC+CGG | - | chr1_2:4269914-4269933 | Msa0050380:CDS | 45.0% | |
| GATTTACTCCCCTTCCGATT+GGG | + | chr1_2:4269943-4269962 | None:intergenic | 45.0% | |
| AGGGGAGTAAATCCATTGTC+CGG | - | chr1_2:4269950-4269969 | Msa0050380:CDS | 45.0% | |
| ! | TCCATTGTCCGGAACTCTTT+TGG | - | chr1_2:4269961-4269980 | Msa0050380:CDS | 45.0% |
| CAGAGAATCAGAAGCAAGCA+TGG | + | chr1_2:4270021-4270040 | None:intergenic | 45.0% | |
| CCTCCAAAATAATCGTCTGC+TGG | + | chr1_2:4270272-4270291 | None:intergenic | 45.0% | |
| !!! | CCAGCAGACGATTATTTTGG+AGG | - | chr1_2:4270269-4270288 | Msa0050380:intron | 45.0% |
| CAGCCAAGGCAACTAAAGTT+CGG | - | chr1_2:4270346-4270365 | Msa0050380:intron | 45.0% | |
| CTTCCGAACTTTAGTTGCCT+TGG | + | chr1_2:4270352-4270371 | None:intergenic | 45.0% | |
| GGATTTACTCCCCTTCCGAT+TGG | + | chr1_2:4269944-4269963 | None:intergenic | 50.0% | |
| GCCAAAAGAGTTCCGGACAA+TGG | + | chr1_2:4269965-4269984 | None:intergenic | 50.0% | |
| TCAGAAGCAAGCATGGGTAC+AGG | + | chr1_2:4270014-4270033 | None:intergenic | 50.0% | |
| GAGTAAAGCTGCTGCAAAGC+AGG | - | chr1_2:4270323-4270342 | Msa0050380:intron | 50.0% | |
| ! | GCAGAAGGGGAAGAAAGTGT+TGG | - | chr1_2:4270419-4270438 | Msa0050380:CDS | 50.0% |
| GAAGGAGCCCAACATTCCTC+AGG | - | chr1_2:4270139-4270158 | Msa0050380:intron | 55.0% | |
| ATTGGGTAGCCGGCGTACGT+TGG | + | chr1_2:4269926-4269945 | None:intergenic | 60.0% | |
| ! | ACGTACGCCGGCTACCCAAT+CGG | - | chr1_2:4269926-4269945 | Msa0050380:CDS | 60.0% |
| TCCCCTTCCGATTGGGTAGC+CGG | + | chr1_2:4269936-4269955 | None:intergenic | 60.0% | |
| TGCTGCAAAGCAGGCAGCCA+AGG | - | chr1_2:4270332-4270351 | Msa0050380:intron | 60.0% | |
| ! | ACGCCGGCTACCCAATCGGA+AGG | - | chr1_2:4269930-4269949 | Msa0050380:CDS | 65.0% |
| ! | CGCCGGCTACCCAATCGGAA+GGG | - | chr1_2:4269931-4269950 | Msa0050380:CDS | 65.0% |
| GCCGGCTACCCAATCGGAAG+GGG | - | chr1_2:4269932-4269951 | Msa0050380:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 4269896 | 4270449 | 4269896 | ID=Msa0050380;Name=Msa0050380 |
| chr1_2 | mRNA | 4269896 | 4270449 | 4269896 | ID=Msa0050380-mRNA-1;Parent=Msa0050380;Name=Msa0050380-mRNA-1;_AED=0.39;_eAED=0.40;_QI=0|0|0|1|1|1|3|0|122 |
| chr1_2 | exon | 4270351 | 4270449 | 4270351 | ID=Msa0050380-mRNA-1:exon:1074;Parent=Msa0050380-mRNA-1 |
| chr1_2 | exon | 4270167 | 4270259 | 4270167 | ID=Msa0050380-mRNA-1:exon:1073;Parent=Msa0050380-mRNA-1 |
| chr1_2 | exon | 4269896 | 4270072 | 4269896 | ID=Msa0050380-mRNA-1:exon:1072;Parent=Msa0050380-mRNA-1 |
| chr1_2 | CDS | 4270351 | 4270449 | 4270351 | ID=Msa0050380-mRNA-1:cds;Parent=Msa0050380-mRNA-1 |
| chr1_2 | CDS | 4270167 | 4270259 | 4270167 | ID=Msa0050380-mRNA-1:cds;Parent=Msa0050380-mRNA-1 |
| chr1_2 | CDS | 4269896 | 4270072 | 4269896 | ID=Msa0050380-mRNA-1:cds;Parent=Msa0050380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
