Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0350320 | XP_003598765.2 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 9.30e-111 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0350320 | sp|Q9SMW7|BTF3_ARATH | 85.430 | 151 | 20 | 2 | 1 | 150 | 1 | 150 | 2.83e-86 | 253 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0350320 | B7FLX9 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 4.44e-111 | 322 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002240 | Msa0350320 | -0.802739 | 4.863027e-49 | -8.615850e-47 |
| Msa0003300 | Msa0350320 | -0.828376 | 9.303524e-55 | -8.615850e-47 |
| Msa0011660 | Msa0350320 | 0.815076 | 1.112856e-51 | -8.615850e-47 |
| Msa0015390 | Msa0350320 | -0.801264 | 9.773850e-49 | -8.615850e-47 |
| Msa0021210 | Msa0350320 | -0.810385 | 1.183433e-50 | -8.615850e-47 |
| Msa0023840 | Msa0350320 | 0.810643 | 1.041014e-50 | -8.615850e-47 |
| Msa0029850 | Msa0350320 | -0.857030 | 2.153854e-62 | -8.615850e-47 |
| Msa0036140 | Msa0350320 | -0.803444 | 3.475830e-49 | -8.615850e-47 |
| Msa0036920 | Msa0350320 | -0.801866 | 7.355909e-49 | -8.615850e-47 |
| Msa0037880 | Msa0350320 | -0.814643 | 1.387879e-51 | -8.615850e-47 |
| Msa0042920 | Msa0350320 | -0.832915 | 7.196211e-56 | -8.615850e-47 |
| Msa0050370 | Msa0350320 | -0.802167 | 6.377791e-49 | -8.615850e-47 |
| Msa0050380 | Msa0350320 | -0.816776 | 4.645845e-52 | -8.615850e-47 |
| Msa0050930 | Msa0350320 | -0.801657 | 8.119870e-49 | -8.615850e-47 |
| Msa0076220 | Msa0350320 | -0.803489 | 3.401423e-49 | -8.615850e-47 |
| Msa0077180 | Msa0350320 | -0.824137 | 9.499637e-54 | -8.615850e-47 |
| Msa0078420 | Msa0350320 | -0.804959 | 1.681418e-49 | -8.615850e-47 |
| Msa0078610 | Msa0350320 | -0.803536 | 3.326588e-49 | -8.615850e-47 |
| Msa0079070 | Msa0350320 | -0.813740 | 2.196277e-51 | -8.615850e-47 |
| Msa0094600 | Msa0350320 | 0.804830 | 1.789728e-49 | -8.615850e-47 |
| Msa0095560 | Msa0350320 | -0.826449 | 2.695928e-54 | -8.615850e-47 |
| Msa0114430 | Msa0350320 | -0.814034 | 1.892382e-51 | -8.615850e-47 |
| Msa0120010 | Msa0350320 | 0.808728 | 2.686106e-50 | -8.615850e-47 |
| Msa0120020 | Msa0350320 | 0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa0125050 | Msa0350320 | -0.822401 | 2.415845e-53 | -8.615850e-47 |
| Msa0131770 | Msa0350320 | -0.825068 | 5.732942e-54 | -8.615850e-47 |
| Msa0137100 | Msa0350320 | -0.826235 | 3.031666e-54 | -8.615850e-47 |
| Msa0140500 | Msa0350320 | 0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0140510 | Msa0350320 | 0.803856 | 2.854986e-49 | -8.615850e-47 |
| Msa0169820 | Msa0350320 | -0.862921 | 3.598296e-64 | -8.615850e-47 |
| Msa0178510 | Msa0350320 | -0.807723 | 4.397678e-50 | -8.615850e-47 |
| Msa0178860 | Msa0350320 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
| Msa0178930 | Msa0350320 | -0.813202 | 2.884615e-51 | -8.615850e-47 |
| Msa0180500 | Msa0350320 | -0.808054 | 3.739565e-50 | -8.615850e-47 |
| Msa0183010 | Msa0350320 | 0.867524 | 1.284432e-65 | -8.615850e-47 |
| Msa0198910 | Msa0350320 | -0.807402 | 5.144788e-50 | -8.615850e-47 |
| Msa0199800 | Msa0350320 | 0.863096 | 3.177024e-64 | -8.615850e-47 |
| Msa0206010 | Msa0350320 | -0.802308 | 5.966643e-49 | -8.615850e-47 |
| Msa0212990 | Msa0350320 | -0.801030 | 1.091390e-48 | -8.615850e-47 |
| Msa0215320 | Msa0350320 | 0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa0219240 | Msa0350320 | -0.806109 | 9.648629e-50 | -8.615850e-47 |
| Msa0223410 | Msa0350320 | 0.832323 | 1.009101e-55 | -8.615850e-47 |
| Msa0226180 | Msa0350320 | -0.802280 | 6.045533e-49 | -8.615850e-47 |
| Msa0230640 | Msa0350320 | 0.878869 | 1.979946e-69 | -8.615850e-47 |
| Msa0236510 | Msa0350320 | 0.805188 | 1.505639e-49 | -8.615850e-47 |
| Msa0237310 | Msa0350320 | -0.827772 | 1.300846e-54 | -8.615850e-47 |
| Msa0249560 | Msa0350320 | -0.813930 | 1.994680e-51 | -8.615850e-47 |
| Msa0251640 | Msa0350320 | -0.825277 | 5.117358e-54 | -8.615850e-47 |
| Msa0259500 | Msa0350320 | -0.802987 | 4.322269e-49 | -8.615850e-47 |
| Msa0265150 | Msa0350320 | -0.801219 | 9.984916e-49 | -8.615850e-47 |
| Msa0272730 | Msa0350320 | -0.817610 | 3.015293e-52 | -8.615850e-47 |
| Msa0274730 | Msa0350320 | -0.829468 | 5.061135e-55 | -8.615850e-47 |
| Msa0277420 | Msa0350320 | -0.801814 | 7.537721e-49 | -8.615850e-47 |
| Msa0278110 | Msa0350320 | -0.816351 | 5.783280e-52 | -8.615850e-47 |
| Msa0278190 | Msa0350320 | -0.815052 | 1.126069e-51 | -8.615850e-47 |
| Msa0285450 | Msa0350320 | -0.801430 | 9.036973e-49 | -8.615850e-47 |
| Msa0288100 | Msa0350320 | -0.802821 | 4.677572e-49 | -8.615850e-47 |
| Msa0290870 | Msa0350320 | -0.824151 | 9.428743e-54 | -8.615850e-47 |
| Msa0292050 | Msa0350320 | -0.801241 | 9.878543e-49 | -8.615850e-47 |
| Msa0302580 | Msa0350320 | 0.809705 | 1.658200e-50 | -8.615850e-47 |
| Msa0305190 | Msa0350320 | -0.832454 | 9.368650e-56 | -8.615850e-47 |
| Msa0306210 | Msa0350320 | 0.823545 | 1.307516e-53 | -8.615850e-47 |
| Msa0315290 | Msa0350320 | -0.808360 | 3.218387e-50 | -8.615850e-47 |
| Msa0315530 | Msa0350320 | -0.826118 | 3.232659e-54 | -8.615850e-47 |
| Msa0319170 | Msa0350320 | -0.829145 | 6.062954e-55 | -8.615850e-47 |
| Msa0326110 | Msa0350320 | -0.800612 | 1.328452e-48 | -8.615850e-47 |
| Msa0326520 | Msa0350320 | -0.812135 | 4.938124e-51 | -8.615850e-47 |
| Msa0336310 | Msa0350320 | -0.802894 | 4.518349e-49 | -8.615850e-47 |
| Msa0336320 | Msa0350320 | -0.819908 | 9.071490e-53 | -8.615850e-47 |
| Msa0339620 | Msa0350320 | -0.801333 | 9.459832e-49 | -8.615850e-47 |
| Msa0340450 | Msa0350320 | -0.834016 | 3.824282e-56 | -8.615850e-47 |
| Msa0342750 | Msa0350320 | -0.814861 | 1.241693e-51 | -8.615850e-47 |
| Msa0344690 | Msa0350320 | 0.871285 | 7.679630e-67 | -8.615850e-47 |
| Msa0350320 | Msa0371730 | -0.803275 | 3.767059e-49 | -8.615850e-47 |
| Msa0350320 | Msa0373450 | -0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0350320 | Msa0376590 | -0.803388 | 3.570884e-49 | -8.615850e-47 |
| Msa0350320 | Msa0379640 | -0.818749 | 1.666240e-52 | -8.615850e-47 |
| Msa0350320 | Msa0381600 | 0.850686 | 1.445981e-60 | -8.615850e-47 |
| Msa0350320 | Msa0381610 | 0.833690 | 4.613936e-56 | -8.615850e-47 |
| Msa0350320 | Msa0383490 | 0.801785 | 7.641649e-49 | -8.615850e-47 |
| Msa0350320 | Msa0385840 | -0.805789 | 1.126789e-49 | -8.615850e-47 |
| Msa0350320 | Msa0387280 | -0.862074 | 6.553591e-64 | -8.615850e-47 |
| Msa0350320 | Msa0391430 | -0.815217 | 1.035044e-51 | -8.615850e-47 |
| Msa0350320 | Msa0392040 | 0.854515 | 1.169267e-61 | -8.615850e-47 |
| Msa0350320 | Msa0393620 | -0.828287 | 9.777252e-55 | -8.615850e-47 |
| Msa0350320 | Msa0394260 | -0.814002 | 1.923461e-51 | -8.615850e-47 |
| Msa0350320 | Msa0395790 | -0.804818 | 1.799962e-49 | -8.615850e-47 |
| Msa0350320 | Msa0398200 | -0.806661 | 7.381995e-50 | -8.615850e-47 |
| Msa0350320 | Msa0411390 | -0.812890 | 3.376737e-51 | -8.615850e-47 |
| Msa0350320 | Msa0412840 | -0.824506 | 7.779513e-54 | -8.615850e-47 |
| Msa0350320 | Msa0413410 | -0.802103 | 6.574760e-49 | -8.615850e-47 |
| Msa0350320 | Msa0425790 | -0.810116 | 1.352786e-50 | -8.615850e-47 |
| Msa0350320 | Msa0426900 | -0.828651 | 7.985441e-55 | -8.615850e-47 |
| Msa0350320 | Msa0433410 | 0.850712 | 1.422582e-60 | -8.615850e-47 |
| Msa0350320 | Msa0439970 | -0.819777 | 9.719895e-53 | -8.615850e-47 |
| Msa0350320 | Msa0444750 | 0.911215 | 7.827800e-83 | -8.615850e-47 |
| Msa0350320 | Msa0455040 | -0.812569 | 3.969208e-51 | -8.615850e-47 |
| Msa0350320 | Msa0457510 | -0.806583 | 7.667573e-50 | -8.615850e-47 |
| Msa0350320 | Msa0466840 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
| Msa0350320 | Msa0469940 | 0.874418 | 6.858378e-68 | -8.615850e-47 |
| Msa0350320 | Msa0472960 | 0.806717 | 7.181327e-50 | -8.615850e-47 |
| Msa0350320 | Msa0477130 | 0.851553 | 8.235065e-61 | -8.615850e-47 |
| Msa0350320 | Msa0479340 | -0.802131 | 6.489169e-49 | -8.615850e-47 |
| Msa0350320 | Msa0485490 | -0.805068 | 1.595966e-49 | -8.615850e-47 |
| Msa0350320 | Msa0490140 | -0.829049 | 6.396651e-55 | -8.615850e-47 |
| Msa0350320 | Msa0512750 | -0.801827 | 7.494475e-49 | -8.615850e-47 |
| Msa0350320 | Msa0514320 | -0.815628 | 8.385543e-52 | -8.615850e-47 |
| Msa0350320 | Msa0516440 | -0.802567 | 5.275733e-49 | -8.615850e-47 |
| Msa0350320 | Msa0521740 | -0.843019 | 1.812520e-58 | -8.615850e-47 |
| Msa0350320 | Msa0526070 | 0.827885 | 1.221724e-54 | -8.615850e-47 |
| Msa0350320 | Msa0532810 | 0.824925 | 6.195941e-54 | -8.615850e-47 |
| Msa0350320 | Msa0548920 | -0.825807 | 3.833097e-54 | -8.615850e-47 |
| Msa0350320 | Msa0574850 | -0.820749 | 5.818751e-53 | -8.615850e-47 |
| Msa0350320 | Msa0580000 | -0.803319 | 3.688842e-49 | -8.615850e-47 |
| Msa0350320 | Msa0585230 | -0.847543 | 1.082247e-59 | -8.615850e-47 |
| Msa0350320 | Msa0587190 | -0.801485 | 8.808356e-49 | -8.615850e-47 |
| Msa0350320 | Msa0599890 | -0.815208 | 1.039708e-51 | -8.615850e-47 |
| Msa0350320 | Msa0602980 | -0.807896 | 4.040357e-50 | -8.615850e-47 |
| Msa0350320 | Msa0613460 | -0.808426 | 3.114856e-50 | -8.615850e-47 |
| Msa0350320 | Msa0622170 | 0.822469 | 2.329257e-53 | -8.615850e-47 |
| Msa0350320 | Msa0626990 | -0.800187 | 1.621483e-48 | -8.615850e-47 |
| Msa0350320 | Msa0636020 | -0.804910 | 1.721645e-49 | -8.615850e-47 |
| Msa0350320 | Msa0640510 | 0.818371 | 2.029381e-52 | -8.615850e-47 |
| Msa0350320 | Msa0648880 | -0.805906 | 1.064433e-49 | -8.615850e-47 |
| Msa0350320 | Msa0654930 | 0.865014 | 8.027205e-65 | -8.615850e-47 |
| Msa0350320 | Msa0658570 | -0.815854 | 7.469957e-52 | -8.615850e-47 |
| Msa0350320 | Msa0672690 | -0.842667 | 2.247636e-58 | -8.615850e-47 |
| Msa0350320 | Msa0678800 | 0.807565 | 4.750368e-50 | -8.615850e-47 |
| Msa0350320 | Msa0687280 | -0.838460 | 2.839035e-57 | -8.615850e-47 |
| Msa0350320 | Msa0688070 | -0.833725 | 4.521266e-56 | -8.615850e-47 |
| Msa0350320 | Msa0696540 | -0.812734 | 3.652703e-51 | -8.615850e-47 |
| Msa0350320 | Msa0703780 | -0.804165 | 2.462593e-49 | -8.615850e-47 |
| Msa0350320 | Msa0724210 | -0.817052 | 4.026459e-52 | -8.615850e-47 |
| Msa0350320 | Msa0731940 | -0.825030 | 5.852493e-54 | -8.615850e-47 |
| Msa0350320 | Msa0744170 | 0.834827 | 2.392512e-56 | -8.615850e-47 |
| Msa0350320 | Msa0745260 | 0.831520 | 1.593498e-55 | -8.615850e-47 |
| Msa0350320 | Msa0750240 | -0.801000 | 1.106645e-48 | -8.615850e-47 |
| Msa0350320 | Msa0753720 | -0.819191 | 1.322396e-52 | -8.615850e-47 |
| Msa0350320 | Msa0760130 | -0.800705 | 1.271401e-48 | -8.615850e-47 |
| Msa0350320 | Msa0763890 | -0.807997 | 3.845134e-50 | -8.615850e-47 |
| Msa0350320 | Msa0768290 | -0.810928 | 9.033174e-51 | -8.615850e-47 |
| Msa0350320 | Msa0768370 | -0.819433 | 1.164687e-52 | -8.615850e-47 |
| Msa0350320 | Msa0773180 | -0.800978 | 1.118457e-48 | -8.615850e-47 |
| Msa0350320 | Msa0777570 | 0.820264 | 7.518399e-53 | -8.615850e-47 |
| Msa0350320 | Msa0788070 | 0.812257 | 4.644551e-51 | -8.615850e-47 |
| Msa0350320 | Msa0794510 | 0.803899 | 2.797095e-49 | -8.615850e-47 |
| Msa0350320 | Msa0807030 | -0.828385 | 9.260520e-55 | -8.615850e-47 |
| Msa0350320 | Msa0810220 | -0.811150 | 8.084450e-51 | -8.615850e-47 |
| Msa0350320 | Msa0817110 | -0.800164 | 1.638319e-48 | -8.615850e-47 |
| Msa0350320 | Msa0820770 | -0.803673 | 3.115439e-49 | -8.615850e-47 |
| Msa0350320 | Msa0825240 | 0.814486 | 1.503592e-51 | -8.615850e-47 |
| Msa0350320 | Msa0831850 | -0.822871 | 1.878210e-53 | -8.615850e-47 |
| Msa0350320 | Msa0832970 | -0.811741 | 6.015596e-51 | -8.615850e-47 |
| Msa0350320 | Msa0844320 | -0.804044 | 2.609449e-49 | -8.615850e-47 |
| Msa0350320 | Msa0844420 | -0.810761 | 9.814596e-51 | -8.615850e-47 |
| Msa0350320 | Msa0844490 | -0.852593 | 4.169550e-61 | -8.615850e-47 |
| Msa0350320 | Msa0853520 | -0.804916 | 1.717085e-49 | -8.615850e-47 |
| Msa0350320 | Msa0857640 | -0.804021 | 2.637621e-49 | -8.615850e-47 |
| Msa0350320 | Msa0861090 | -0.803138 | 4.021871e-49 | -8.615850e-47 |
| Msa0350320 | Msa0862110 | -0.812638 | 3.833180e-51 | -8.615850e-47 |
| Msa0350320 | Msa0864470 | 0.824200 | 9.180279e-54 | -8.615850e-47 |
| Msa0350320 | Msa0865510 | 0.829621 | 4.647276e-55 | -8.615850e-47 |
| Msa0350320 | Msa0866410 | -0.810101 | 1.362795e-50 | -8.615850e-47 |
| Msa0350320 | Msa0876850 | 0.819915 | 9.036351e-53 | -8.615850e-47 |
| Msa0350320 | Msa0879550 | 0.807007 | 6.236886e-50 | -8.615850e-47 |
| Msa0350320 | Msa0897330 | -0.822792 | 1.960220e-53 | -8.615850e-47 |
| Msa0350320 | Msa0908770 | 0.814425 | 1.551165e-51 | -8.615850e-47 |
| Msa0350320 | Msa0914270 | -0.827597 | 1.433021e-54 | -8.615850e-47 |
| Msa0350320 | Msa0927380 | -0.834270 | 3.302971e-56 | -8.615850e-47 |
| Msa0350320 | Msa0931520 | -0.833414 | 5.406534e-56 | -8.615850e-47 |
| Msa0350320 | Msa0933100 | -0.826936 | 2.063221e-54 | -8.615850e-47 |
| Msa0350320 | Msa0936300 | -0.818258 | 2.153476e-52 | -8.615850e-47 |
| Msa0350320 | Msa0942080 | 0.838041 | 3.638417e-57 | -8.615850e-47 |
| Msa0350320 | Msa0942550 | 0.821913 | 3.135760e-53 | -8.615850e-47 |
| Msa0350320 | Msa0942560 | 0.802482 | 5.494472e-49 | -8.615850e-47 |
| Msa0350320 | Msa0946280 | 0.819879 | 9.211804e-53 | -8.615850e-47 |
| Msa0350320 | Msa0946690 | 0.821415 | 4.087358e-53 | -8.615850e-47 |
| Msa0350320 | Msa0948320 | -0.805163 | 1.523986e-49 | -8.615850e-47 |
| Msa0350320 | Msa0953120 | -0.805846 | 1.095723e-49 | -8.615850e-47 |
| Msa0350320 | Msa0964900 | -0.807668 | 4.517363e-50 | -8.615850e-47 |
| Msa0350320 | Msa0969520 | -0.841193 | 5.511583e-58 | -8.615850e-47 |
| Msa0350320 | Msa0973100 | -0.824783 | 6.693594e-54 | -8.615850e-47 |
| Msa0350320 | Msa0974080 | -0.819724 | 9.995362e-53 | -8.615850e-47 |
| Msa0350320 | Msa0976670 | -0.819010 | 1.453409e-52 | -8.615850e-47 |
| Msa0350320 | Msa0999100 | -0.801096 | 1.057740e-48 | -8.615850e-47 |
| Msa0350320 | Msa1000250 | -0.822501 | 2.290265e-53 | -8.615850e-47 |
| Msa0350320 | Msa1000880 | -0.803538 | 3.322983e-49 | -8.615850e-47 |
| Msa0350320 | Msa1001390 | -0.809787 | 1.592504e-50 | -8.615850e-47 |
| Msa0350320 | Msa1003620 | -0.805726 | 1.161401e-49 | -8.615850e-47 |
| Msa0350320 | Msa1008750 | -0.813239 | 2.830761e-51 | -8.615850e-47 |
| Msa0350320 | Msa1018990 | 0.828841 | 7.183672e-55 | -8.615850e-47 |
| Msa0350320 | Msa1028970 | -0.812410 | 4.299250e-51 | -8.615850e-47 |
| Msa0350320 | Msa1029060 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
| Msa0350320 | Msa1033410 | 0.813952 | 1.972712e-51 | -8.615850e-47 |
| Msa0350320 | Msa1039710 | 0.830228 | 3.305578e-55 | -8.615850e-47 |
| Msa0350320 | Msa1041600 | 0.847871 | 8.787092e-60 | -8.615850e-47 |
| Msa0350320 | Msa1054150 | 0.805055 | 1.605678e-49 | -8.615850e-47 |
| Msa0350320 | Msa1061020 | 0.800144 | 1.654058e-48 | -8.615850e-47 |
| Msa0350320 | Msa1068200 | 0.818658 | 1.747109e-52 | -8.615850e-47 |
| Msa0350320 | Msa1073070 | 0.800730 | 1.256599e-48 | -8.615850e-47 |
| Msa0350320 | Msa1075080 | 0.864912 | 8.641129e-65 | -8.615850e-47 |
| Msa0350320 | Msa1075220 | 0.876979 | 9.075134e-69 | -8.615850e-47 |
| Msa0350320 | Msa1079430 | -0.820966 | 5.187993e-53 | -8.615850e-47 |
| Msa0350320 | Msa1080330 | 0.830001 | 3.754632e-55 | -8.615850e-47 |
| Msa0350320 | Msa1098250 | -0.825703 | 4.055638e-54 | -8.615850e-47 |
| Msa0350320 | Msa1098270 | -0.819565 | 1.086197e-52 | -8.615850e-47 |
| Msa0350320 | Msa1100130 | 0.804391 | 2.209201e-49 | -8.615850e-47 |
| Msa0350320 | Msa1111870 | -0.816749 | 4.710767e-52 | -8.615850e-47 |
| Msa0350320 | Msa1113170 | -0.817419 | 3.330264e-52 | -8.615850e-47 |
| Msa0350320 | Msa1116130 | 0.844298 | 8.242339e-59 | -8.615850e-47 |
| Msa0350320 | Msa1118760 | -0.802838 | 4.638632e-49 | -8.615850e-47 |
| Msa0350320 | Msa1119480 | -0.821623 | 3.659413e-53 | -8.615850e-47 |
| Msa0350320 | Msa1121450 | 0.864899 | 8.720071e-65 | -8.615850e-47 |
| Msa0350320 | Msa1121480 | -0.838311 | 3.100720e-57 | -8.615850e-47 |
| Msa0350320 | Msa1121490 | -0.847721 | 9.669704e-60 | -8.615850e-47 |
| Msa0350320 | Msa1124540 | 0.827318 | 1.671235e-54 | -8.615850e-47 |
| Msa0350320 | Msa1127770 | -0.804303 | 2.304272e-49 | -8.615850e-47 |
| Msa0350320 | Msa1137570 | -0.849608 | 2.899142e-60 | -8.615850e-47 |
| Msa0350320 | Msa1139000 | 0.850350 | 1.797338e-60 | -8.615850e-47 |
| Msa0350320 | Msa1144720 | 0.872943 | 2.155093e-67 | -8.615850e-47 |
| Msa0350320 | Msa1154280 | -0.819710 | 1.006721e-52 | -8.615850e-47 |
| Msa0350320 | Msa1156150 | 0.830545 | 2.764787e-55 | -8.615850e-47 |
| Msa0350320 | Msa1156340 | 0.825163 | 5.443630e-54 | -8.615850e-47 |
| Msa0350320 | Msa1162550 | 0.868635 | 5.640172e-66 | -8.615850e-47 |
| Msa0350320 | Msa1163590 | 0.823986 | 1.030812e-53 | -8.615850e-47 |
| Msa0350320 | Msa1166500 | 0.849796 | 2.569216e-60 | -8.615850e-47 |
| Msa0350320 | Msa1174310 | -0.800711 | 1.267802e-48 | -8.615850e-47 |
| Msa0350320 | Msa1177780 | -0.815992 | 6.956714e-52 | -8.615850e-47 |
| Msa0350320 | Msa1183100 | 0.839352 | 1.667653e-57 | -8.615850e-47 |
| Msa0350320 | Msa1185110 | -0.810621 | 1.052137e-50 | -8.615850e-47 |
| Msa0350320 | Msa1186950 | 0.821458 | 3.994580e-53 | -8.615850e-47 |
| Msa0350320 | Msa1195190 | -0.813785 | 2.146486e-51 | -8.615850e-47 |
| Msa0350320 | Msa1202770 | 0.853303 | 2.611630e-61 | -8.615850e-47 |
| Msa0350320 | Msa1211140 | 0.802972 | 4.353190e-49 | -8.615850e-47 |
| Msa0350320 | Msa1224480 | -0.834172 | 3.494323e-56 | -8.615850e-47 |
| Msa0350320 | Msa1224580 | 0.837311 | 5.602370e-57 | -8.615850e-47 |
| Msa0350320 | Msa1235400 | -0.803017 | 4.260251e-49 | -8.615850e-47 |
| Msa0350320 | Msa1237980 | -0.812851 | 3.443885e-51 | -8.615850e-47 |
| Msa0350320 | Msa1243100 | -0.843919 | 1.041744e-58 | -8.615850e-47 |
| Msa0350320 | Msa1245830 | -0.800065 | 1.716505e-48 | -8.615850e-47 |
| Msa0350320 | Msa1257800 | 0.816031 | 6.818476e-52 | -8.615850e-47 |
| Msa0350320 | Msa1259490 | 0.814124 | 1.807171e-51 | -8.615850e-47 |
| Msa0350320 | Msa1263290 | 0.808398 | 3.159217e-50 | -8.615850e-47 |
| Msa0350320 | Msa1265340 | 0.813084 | 3.061242e-51 | -8.615850e-47 |
| Msa0350320 | Msa1267610 | -0.807803 | 4.228279e-50 | -8.615850e-47 |
| Msa0350320 | Msa1270660 | -0.821115 | 4.793530e-53 | -8.615850e-47 |
| Msa0350320 | Msa1270730 | -0.808214 | 3.457632e-50 | -8.615850e-47 |
| Msa0350320 | Msa1282580 | 0.854254 | 1.390839e-61 | -8.615850e-47 |
| Msa0350320 | Msa1284680 | -0.810196 | 1.299810e-50 | -8.615850e-47 |
| Msa0350320 | Msa1286800 | -0.812207 | 4.762179e-51 | -8.615850e-47 |
| Msa0350320 | Msa1295330 | -0.813396 | 2.614107e-51 | -8.615850e-47 |
| Msa0350320 | Msa1295540 | 0.839774 | 1.295470e-57 | -8.615850e-47 |
| Msa0350320 | Msa1298510 | -0.808092 | 3.669448e-50 | -8.615850e-47 |
| Msa0350320 | Msa1304890 | 0.823951 | 1.050634e-53 | -8.615850e-47 |
| Msa0350320 | Msa1305190 | -0.822361 | 2.468964e-53 | -8.615850e-47 |
| Msa0350320 | Msa1305340 | -0.813346 | 2.681405e-51 | -8.615850e-47 |
| Msa0350320 | Msa1305350 | -0.823179 | 1.592531e-53 | -8.615850e-47 |
| Msa0350320 | Msa1305810 | -0.820109 | 8.158522e-53 | -8.615850e-47 |
| Msa0350320 | Msa1308870 | -0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa0350320 | Msa1310770 | 0.833555 | 4.985688e-56 | -8.615850e-47 |
| Msa0350320 | Msa1325860 | 0.820743 | 5.838178e-53 | -8.615850e-47 |
| Msa0350320 | Msa1333730 | -0.805649 | 1.205287e-49 | -8.615850e-47 |
| Msa0350320 | Msa1348760 | -0.812360 | 4.408594e-51 | -8.615850e-47 |
| Msa0350320 | Msa1353470 | -0.802758 | 4.818122e-49 | -8.615850e-47 |
| Msa0350320 | Msa1359650 | 0.803377 | 3.588309e-49 | -8.615850e-47 |
| Msa0350320 | Msa1364830 | -0.828475 | 8.809216e-55 | -8.615850e-47 |
| Msa0350320 | Msa1372150 | -0.801396 | 9.182352e-49 | -8.615850e-47 |
| Msa0350320 | Msa1373350 | -0.804901 | 1.728965e-49 | -8.615850e-47 |
| Msa0350320 | Msa1376160 | 0.819918 | 9.024373e-53 | -8.615850e-47 |
| Msa0350320 | Msa1376890 | -0.812439 | 4.237055e-51 | -8.615850e-47 |
| Msa0350320 | Msa1376930 | -0.839821 | 1.259778e-57 | -8.615850e-47 |
| Msa0350320 | Msa1378940 | -0.833706 | 4.570832e-56 | -8.615850e-47 |
| Msa0350320 | Msa1379590 | -0.834090 | 3.663331e-56 | -8.615850e-47 |
| Msa0350320 | Msa1386750 | -0.817847 | 2.666294e-52 | -8.615850e-47 |
| Msa0350320 | Msa1390700 | -0.803885 | 2.815115e-49 | -8.615850e-47 |
| Msa0350320 | Msa1391750 | -0.800217 | 1.598704e-48 | -8.615850e-47 |
| Msa0350320 | Msa1394310 | -0.822491 | 2.302605e-53 | -8.615850e-47 |
| Msa0350320 | Msa1394540 | -0.802165 | 6.386757e-49 | -8.615850e-47 |
| Msa0350320 | Msa1403340 | -0.816825 | 4.529899e-52 | -8.615850e-47 |
| Msa0350320 | Msa1404240 | 0.810192 | 1.302297e-50 | -8.615850e-47 |
| Msa0350320 | Msa1407600 | -0.806358 | 8.550170e-50 | -8.615850e-47 |
| Msa0350320 | Msa1416140 | 0.801195 | 1.009812e-48 | -8.615850e-47 |
| Msa0350320 | Msa1420820 | -0.817790 | 2.746706e-52 | -8.615850e-47 |
| Msa0350320 | Msa1424640 | -0.829617 | 4.657121e-55 | -8.615850e-47 |
| Msa0350320 | Msa1444250 | 0.809059 | 2.281708e-50 | -8.615850e-47 |
| Msa0350320 | Msa1449340 | 0.800454 | 1.430323e-48 | -8.615850e-47 |
| Msa0350320 | Msa1451620 | 0.884038 | 2.696661e-71 | -8.615850e-47 |
| Msa0350320 | Msa1453560 | -0.831951 | 1.247730e-55 | -8.615850e-47 |
| Msa0350320 | Msa1459050 | -0.846578 | 1.989063e-59 | -8.615850e-47 |
| Msa0350320 | Msa1461810 | 0.852953 | 3.289883e-61 | -8.615850e-47 |
| Msa0350320 | Msa1464940 | -0.808565 | 2.909014e-50 | -8.615850e-47 |
| Msa0350320 | Msa1466540 | -0.821797 | 3.335767e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0350320 | MtrunA17_Chr3g0084861 | 100.000 | 153 | 0 | 0 | 7 | 159 | 1 | 153 | 4.78e-110 | 309 |
| Msa0350320 | MtrunA17_Chr4g0035481 | 89.474 | 152 | 16 | 0 | 7 | 158 | 1 | 152 | 3.92e-98 | 279 |
| Msa0350320 | MtrunA17_Chr3g0084831 | 84.559 | 136 | 3 | 1 | 24 | 159 | 6 | 123 | 2.43e-75 | 220 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0350320 | AT1G17880.1 | 85.430 | 151 | 20 | 2 | 1 | 150 | 1 | 150 | 2.88e-87 | 253 |
| Msa0350320 | AT1G73230.1 | 85.987 | 157 | 21 | 1 | 1 | 156 | 1 | 157 | 1.22e-84 | 246 |
Find 75 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCTGAAATACATGATTT+TGG | 0.175311 | 3_1:-15322126 | None:intergenic |
| TGAGGAAGTCAACATATTTA+AGG | 0.202032 | 3_1:+15321205 | Msa0350320:CDS |
| AAATTTAGGGCCAGATAATT+TGG | 0.214129 | 3_1:+15321895 | Msa0350320:intron |
| TTGGAGGTAGCAATCAATTT+TGG | 0.241411 | 3_1:+15322277 | Msa0350320:three_prime_UTR |
| TCTCCAAAATCATGTATTTC+AGG | 0.248894 | 3_1:+15322123 | Msa0350320:three_prime_UTR |
| GTTGCATCAGCTCCTGCTTC+AGG | 0.258032 | 3_1:-15321959 | None:intergenic |
| TATTGTATGTCCACCATTAT+TGG | 0.273370 | 3_1:+15322258 | Msa0350320:three_prime_UTR |
| GGTATTTGTATTCATATATA+TGG | 0.273739 | 3_1:+15322298 | Msa0350320:three_prime_UTR |
| TTGTTCTTGTTGATTCTCTA+TGG | 0.280422 | 3_1:+15322391 | Msa0350320:three_prime_UTR |
| TTTCCCTCTTTCAGAGTTGC+AGG | 0.297873 | 3_1:+15321766 | Msa0350320:intron |
| CTCGTATCTGTATGCTTTGT+TGG | 0.304613 | 3_1:+15322453 | Msa0350320:three_prime_UTR |
| CATCTATTGCTGCCAATACT+TGG | 0.316766 | 3_1:+15321353 | Msa0350320:CDS |
| GTGTAAAACTAAAATGTTTA+GGG | 0.322237 | 3_1:+15322333 | Msa0350320:three_prime_UTR |
| TGTGTAAAACTAAAATGTTT+AGG | 0.335838 | 3_1:+15322332 | Msa0350320:three_prime_UTR |
| CGCGCAGTCGCTTCTGCAAA+TGG | 0.338675 | 3_1:-15322488 | None:intergenic |
| ATGTAAATCACATACCTAAT+TGG | 0.340108 | 3_1:-15321811 | None:intergenic |
| CAAAGCACTCTGAAGAGAAT+TGG | 0.364468 | 3_1:+15321161 | Msa0350320:CDS |
| CCCAACATCATTCACCAATT+AGG | 0.370291 | 3_1:+15321797 | Msa0350320:CDS |
| TTGATTGCTACCTCCAATAA+TGG | 0.372567 | 3_1:-15322271 | None:intergenic |
| CGGTACCTTTGATAAGGGTT+AGG | 0.375421 | 3_1:-15319398 | None:intergenic |
| TTGATTCTCTATGGTTATGT+TGG | 0.411370 | 3_1:+15322400 | Msa0350320:three_prime_UTR |
| GCTGTACCAGATCTTGTCCC+TGG | 0.417371 | 3_1:+15322007 | Msa0350320:CDS |
| TTTAACAACTTATCTAAAAG+AGG | 0.424887 | 3_1:-15322160 | None:intergenic |
| GTCTCCCCAGGGACAAGATC+TGG | 0.437467 | 3_1:-15322013 | None:intergenic |
| TCACTTCGCAATCTGTTCCT+AGG | 0.443061 | 3_1:+15319368 | Msa0350320:five_prime_UTR |
| GCGCAGTCGCTTCTGCAAAT+GGG | 0.444408 | 3_1:-15322487 | None:intergenic |
| CAGAAGCAGGCTCCTGAAGC+AGG | 0.445075 | 3_1:+15321947 | Msa0350320:CDS |
| AGCCGAGCAATTTCAGAAGC+AGG | 0.452861 | 3_1:+15321934 | Msa0350320:CDS |
| TATCTGTATGCTTTGTTGGA+AGG | 0.458476 | 3_1:+15322457 | Msa0350320:three_prime_UTR |
| CCTAATTGGTGAATGATGTT+GGG | 0.465851 | 3_1:-15321797 | None:intergenic |
| AAATATGTTGACTTCCTCAA+TGG | 0.472125 | 3_1:-15321201 | None:intergenic |
| TCCACCGGTTCTAACAGAAC+CGG | 0.478108 | 3_1:-15320787 | None:intergenic |
| CAAGTTCAACAGACAAACTT+AGG | 0.481430 | 3_1:-15322233 | None:intergenic |
| CTGTACCAGATCTTGTCCCT+GGG | 0.481926 | 3_1:+15322008 | Msa0350320:CDS |
| GCCAATACTTGGGTTGTTAG+CGG | 0.491455 | 3_1:+15321364 | Msa0350320:CDS |
| CTGAAGAGAATTGGAGTGAA+TGG | 0.492121 | 3_1:+15321170 | Msa0350320:CDS |
| TCTGTTAGAACCGGTGGAAA+GGG | 0.501562 | 3_1:+15320792 | Msa0350320:CDS |
| GCAGTTTCAAAGGTCTCCCC+AGG | 0.505541 | 3_1:-15322025 | None:intergenic |
| ATGTTGACTTCCTCAATGGC+AGG | 0.506965 | 3_1:-15321197 | None:intergenic |
| ACCGCTAACAACCCAAGTAT+TGG | 0.513678 | 3_1:-15321365 | None:intergenic |
| ATCTATTGCTGCCAATACTT+GGG | 0.514177 | 3_1:+15321354 | Msa0350320:CDS |
| ACCTAATTGGTGAATGATGT+TGG | 0.517368 | 3_1:-15321798 | None:intergenic |
| CTCCTCAGCAGCAGTTTCAA+AGG | 0.517897 | 3_1:-15322035 | None:intergenic |
| CGCAGTCGCTTCTGCAAATG+GGG | 0.518747 | 3_1:-15322486 | None:intergenic |
| TGATGCAACTGCAGCACAAG+AGG | 0.526172 | 3_1:+15321973 | Msa0350320:CDS |
| TTCTGTTAGAACCGGTGGAA+AGG | 0.527490 | 3_1:+15320791 | Msa0350320:CDS |
| GTGAATTAATATTACCTTTG+GGG | 0.533113 | 3_1:-15321253 | None:intergenic |
| CGAAGTGAAGAAGAACTAAA+CGG | 0.538051 | 3_1:-15319353 | None:intergenic |
| GCCGGTTCTGTTAGAACCGG+TGG | 0.539695 | 3_1:+15320786 | Msa0350320:CDS |
| GACCTTTGAAACTGCTGCTG+AGG | 0.544100 | 3_1:+15322033 | Msa0350320:CDS |
| CTAAACGGTGGAAAGAGATA+AGG | 0.553233 | 3_1:-15319338 | None:intergenic |
| ATGGCCGGTTCTGTTAGAAC+CGG | 0.553954 | 3_1:+15320783 | Msa0350320:CDS |
| AGCCTGCTTCTGAAATTGCT+CGG | 0.561723 | 3_1:-15321936 | None:intergenic |
| AAGGGTTAGGTTGCGAACCT+AGG | 0.562991 | 3_1:-15319385 | None:intergenic |
| TGTATGTCCACCATTATTGG+AGG | 0.563863 | 3_1:+15322261 | Msa0350320:three_prime_UTR |
| CGTCTGTAGTAGCTGTCTTG+TGG | 0.564591 | 3_1:-15321127 | None:intergenic |
| TGTAGAAAAGTTGATGAAGA+TGG | 0.565842 | 3_1:+15320764 | Msa0350320:CDS |
| TCTGACTGTACCCTTTCCAC+CGG | 0.575776 | 3_1:-15320802 | None:intergenic |
| AACTGCTGCTGAGGAGACCA+AGG | 0.581530 | 3_1:+15322042 | Msa0350320:CDS |
| ATTCAGTTTCTAAACCCCAA+AGG | 0.603569 | 3_1:+15321239 | Msa0350320:CDS |
| TGTTGACTTCCTCAATGGCA+GGG | 0.607118 | 3_1:-15321196 | None:intergenic |
| GAAAAGTTGATGAAGATGGC+CGG | 0.607204 | 3_1:+15320768 | Msa0350320:CDS |
| CGCAACCTAACCCTTATCAA+AGG | 0.615895 | 3_1:+15319393 | Msa0350320:five_prime_UTR |
| ATATGCTTACTCTTTGTCTG+AGG | 0.617486 | 3_1:-15321391 | None:intergenic |
| GAATGGTATCCCTGCCATTG+AGG | 0.621892 | 3_1:+15321187 | Msa0350320:CDS |
| ATTGCTACCTCCAATAATGG+TGG | 0.629552 | 3_1:-15322268 | None:intergenic |
| GTGGAAAGGGTACAGTCAGA+AGG | 0.638872 | 3_1:+15320805 | Msa0350320:CDS |
| CTAATTGGTGAATGATGTTG+GGG | 0.645637 | 3_1:-15321796 | None:intergenic |
| GATACGAGTGAAATGTCAGA+TGG | 0.648830 | 3_1:-15322438 | None:intergenic |
| TGTAAAACTAAAATGTTTAG+GGG | 0.655497 | 3_1:+15322334 | Msa0350320:three_prime_UTR |
| AGTCGCTTCTGCAAATGGGG+AGG | 0.660892 | 3_1:-15322483 | None:intergenic |
| CGGTGGAAAGAGATAAGGAG+TGG | 0.674371 | 3_1:-15319333 | None:intergenic |
| CAGTTTCAAAGGTCTCCCCA+GGG | 0.705206 | 3_1:-15322024 | None:intergenic |
| TGTACCAGATCTTGTCCCTG+GGG | 0.709570 | 3_1:+15322009 | Msa0350320:CDS |
| AGTGAAGAAGAACTAAACGG+TGG | 0.718619 | 3_1:-15319350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGATTTCATTTATATTTT+TGG | + | chr3_1:15320473-15320492 | Msa0350320:intron | 10.0% |
| !! | AATTAAATGAAATCAACAAA+GGG | - | chr3_1:15319579-15319598 | None:intergenic | 15.0% |
| !! | AAATTAAATGAAATCAACAA+AGG | - | chr3_1:15319580-15319599 | None:intergenic | 15.0% |
| !!! | AGTTTTATAGTTAGAATAAT+TGG | + | chr3_1:15319733-15319752 | Msa0350320:intron | 15.0% |
| !!! | AAAAAAAATTTAAAGTGGAA+AGG | + | chr3_1:15319786-15319805 | Msa0350320:intron | 15.0% |
| !!! | AAAAAAATTTAAAGTGGAAA+GGG | + | chr3_1:15319787-15319806 | Msa0350320:intron | 15.0% |
| !!! | CATTTAAAATTTTCATTTTC+TGG | + | chr3_1:15319854-15319873 | Msa0350320:intron | 15.0% |
| !! | ATTTAATAATACTAAACTAC+TGG | - | chr3_1:15319895-15319914 | None:intergenic | 15.0% |
| !!! | TTATTAAATCTTGTTTAGAT+TGG | + | chr3_1:15319906-15319925 | Msa0350320:intron | 15.0% |
| !! | ATTATAATACATTAATGAGA+AGG | + | chr3_1:15320354-15320373 | Msa0350320:intron | 15.0% |
| !! | TTTCCAAAATTAGTATAAAA+AGG | - | chr3_1:15320580-15320599 | None:intergenic | 15.0% |
| !!! | AATTGTTTTTTATTTGATTG+TGG | + | chr3_1:15320996-15321015 | Msa0350320:intron | 15.0% |
| !!! | AATCTTATATTCTTATTTCT+TGG | + | chr3_1:15321870-15321889 | Msa0350320:intron | 15.0% |
| !!! | TTATTTCTTGGAAAAATTTA+GGG | + | chr3_1:15321882-15321901 | Msa0350320:intron | 15.0% |
| !! | CGAAATGATTGAATAAAAAA+CGG | - | chr3_1:15319421-15319440 | None:intergenic | 20.0% |
| !! | TCAAAAAATAATCGAAACTA+GGG | - | chr3_1:15319508-15319527 | None:intergenic | 20.0% |
| !! | ATCAAAAAATAATCGAAACT+AGG | - | chr3_1:15319509-15319528 | None:intergenic | 20.0% |
| !! | AGATTTAGATTATAGATTGT+TGG | + | chr3_1:15319678-15319697 | Msa0350320:intron | 20.0% |
| !! | AATAATTGGAGATAGAAAAA+TGG | + | chr3_1:15319747-15319766 | Msa0350320:intron | 20.0% |
| !!! | AAAAAATTTAAAGTGGAAAG+GGG | + | chr3_1:15319788-15319807 | Msa0350320:intron | 20.0% |
| !! | ATGATTGTGTTAAAAATGTT+TGG | + | chr3_1:15320394-15320413 | Msa0350320:intron | 20.0% |
| !!! | GATTTCATTTATATTTTTGG+TGG | + | chr3_1:15320476-15320495 | Msa0350320:intron | 20.0% |
| !!! | CAACCTTTTTATACTAATTT+TGG | + | chr3_1:15320574-15320593 | Msa0350320:intron | 20.0% |
| !!! | TAGTTTTACGAAACAAAAAT+TGG | - | chr3_1:15320956-15320975 | None:intergenic | 20.0% |
| !!! | TGTTTGATAATGTATCATTA+AGG | - | chr3_1:15321435-15321454 | None:intergenic | 20.0% |
| !!! | CTTATTTCTTGGAAAAATTT+AGG | + | chr3_1:15321881-15321900 | Msa0350320:intron | 20.0% |
| !! | TTTAACAACTTATCTAAAAG+AGG | - | chr3_1:15322163-15322182 | None:intergenic | 20.0% |
| !! | GGTATTTGTATTCATATATA+TGG | + | chr3_1:15322298-15322317 | Msa0350320:three_prime_UTR | 20.0% |
| !! | TGTGTAAAACTAAAATGTTT+AGG | + | chr3_1:15322332-15322351 | Msa0350320:three_prime_UTR | 20.0% |
| !! | GTGTAAAACTAAAATGTTTA+GGG | + | chr3_1:15322333-15322352 | Msa0350320:three_prime_UTR | 20.0% |
| !! | TGTAAAACTAAAATGTTTAG+GGG | + | chr3_1:15322334-15322353 | Msa0350320:three_prime_UTR | 20.0% |
| !!! | TCTGTTTCGTTTTTCTTATT+CGG | + | chr3_1:15319454-15319473 | Msa0350320:intron | 25.0% |
| !! | AAAAATTTAAAGTGGAAAGG+GGG | + | chr3_1:15319789-15319808 | Msa0350320:intron | 25.0% |
| ! | CACACTTTACAATTTCTAAT+TGG | - | chr3_1:15319833-15319852 | None:intergenic | 25.0% |
| ! | CAATTAGAAATTGTAAAGTG+TGG | + | chr3_1:15319831-15319850 | Msa0350320:intron | 25.0% |
| !!! | ATCTTGTTTAGATTGGTTTT+AGG | + | chr3_1:15319913-15319932 | Msa0350320:intron | 25.0% |
| ! | TCTTATTACAAGATGCATTT+AGG | - | chr3_1:15319945-15319964 | None:intergenic | 25.0% |
| ! | TATTTGATAGAACATTATGG+CGG | - | chr3_1:15320036-15320055 | None:intergenic | 25.0% |
| ! | TGGTATTTGATAGAACATTA+TGG | - | chr3_1:15320039-15320058 | None:intergenic | 25.0% |
| ! | GTTCTATCAAATACCATATT+TGG | + | chr3_1:15320043-15320062 | Msa0350320:intron | 25.0% |
| ! | TACAAGATGAAAAGATTTAG+AGG | - | chr3_1:15320083-15320102 | None:intergenic | 25.0% |
| ! | TTGGATTAAGTCAATATGAT+AGG | + | chr3_1:15320413-15320432 | Msa0350320:intron | 25.0% |
| ! | AGATTACTGACAAAAATTAC+AGG | - | chr3_1:15320620-15320639 | None:intergenic | 25.0% |
| ! | TCATTTATTCATCTGTACAA+AGG | + | chr3_1:15320676-15320695 | Msa0350320:intron | 25.0% |
| ! | GTGAATTAATATTACCTTTG+GGG | - | chr3_1:15321256-15321275 | None:intergenic | 25.0% |
| ! | CGTGAATTAATATTACCTTT+GGG | - | chr3_1:15321257-15321276 | None:intergenic | 25.0% |
| ! | TCGTGAATTAATATTACCTT+TGG | - | chr3_1:15321258-15321277 | None:intergenic | 25.0% |
| ! | ACTAACTGTTAAACTTGAAT+TGG | + | chr3_1:15321318-15321337 | Msa0350320:intron | 25.0% |
| !! | AAATTTTGAACATTCCAACA+TGG | - | chr3_1:15321622-15321641 | None:intergenic | 25.0% |
| ! | GAAATCAGATCAAAATCAAA+AGG | - | chr3_1:15321716-15321735 | None:intergenic | 25.0% |
| ! | ATGTAAATCACATACCTAAT+TGG | - | chr3_1:15321814-15321833 | None:intergenic | 25.0% |
| !! | TTCAGATTTTCCAAATTATC+TGG | - | chr3_1:15321908-15321927 | None:intergenic | 25.0% |
| ! | TTGACATCCAAAAATAAAGA+TGG | - | chr3_1:15322086-15322105 | None:intergenic | 25.0% |
| !!! | ATGATTTTGGAGAAAAAAAG+AGG | - | chr3_1:15322116-15322135 | None:intergenic | 25.0% |
| !! | TAACCTGAAATACATGATTT+TGG | - | chr3_1:15322129-15322148 | None:intergenic | 25.0% |
| !! | AAGTCACCATAACATTTTTA+TGG | + | chr3_1:15322365-15322384 | Msa0350320:three_prime_UTR | 25.0% |
| ! | CAAGAACCATAAAAATGTTA+TGG | - | chr3_1:15322374-15322393 | None:intergenic | 25.0% |
| AAAAACGGTACCTTTGATAA+GGG | - | chr3_1:15319406-15319425 | None:intergenic | 30.0% | |
| AAAAAACGGTACCTTTGATA+AGG | - | chr3_1:15319407-15319426 | None:intergenic | 30.0% | |
| TTCAATGTAATCATGTGTGT+TGG | + | chr3_1:15320208-15320227 | Msa0350320:intron | 30.0% | |
| ATACACAGTTCTTTCTTTGA+TGG | + | chr3_1:15320309-15320328 | Msa0350320:intron | 30.0% | |
| TACACAGTTCTTTCTTTGAT+GGG | + | chr3_1:15320310-15320329 | Msa0350320:intron | 30.0% | |
| ATGAGAAGGATAAATTCTAC+TGG | + | chr3_1:15320368-15320387 | Msa0350320:intron | 30.0% | |
| !! | TGTAGAAAAGTTGATGAAGA+TGG | + | chr3_1:15320764-15320783 | Msa0350320:CDS | 30.0% |
| ATTGGAGTTTAAGAGATACA+TGG | - | chr3_1:15320938-15320957 | None:intergenic | 30.0% | |
| GTATCAGACAGAAATAATAC+AGG | - | chr3_1:15321024-15321043 | None:intergenic | 30.0% | |
| !! | AGCCTTCTTCTTTCTAAAAT+GGG | - | chr3_1:15321105-15321124 | None:intergenic | 30.0% |
| !! | AAATATGTTGACTTCCTCAA+TGG | - | chr3_1:15321204-15321223 | None:intergenic | 30.0% |
| TGAGGAAGTCAACATATTTA+AGG | + | chr3_1:15321205-15321224 | Msa0350320:CDS | 30.0% | |
| CATCAATGTTCAGAAATTGT+AGG | + | chr3_1:15321568-15321587 | Msa0350320:intron | 30.0% | |
| AAAATGAGGAAAACAATGCA+TGG | - | chr3_1:15321668-15321687 | None:intergenic | 30.0% | |
| GAAGTCTCACAATTAAAATG+AGG | - | chr3_1:15321682-15321701 | None:intergenic | 30.0% | |
| !! | ATTTTGATCTGATTTCATGC+TGG | + | chr3_1:15321720-15321739 | Msa0350320:intron | 30.0% |
| ! | AAATTTAGGGCCAGATAATT+TGG | + | chr3_1:15321895-15321914 | Msa0350320:intron | 30.0% |
| !!! | TTCTGTGCCATCTTTATTTT+TGG | + | chr3_1:15322076-15322095 | Msa0350320:three_prime_UTR | 30.0% |
| TCTCCAAAATCATGTATTTC+AGG | + | chr3_1:15322123-15322142 | Msa0350320:three_prime_UTR | 30.0% | |
| TATTGTATGTCCACCATTAT+TGG | + | chr3_1:15322258-15322277 | Msa0350320:three_prime_UTR | 30.0% | |
| !! | TTGTTCTTGTTGATTCTCTA+TGG | + | chr3_1:15322391-15322410 | Msa0350320:three_prime_UTR | 30.0% |
| TTGATTCTCTATGGTTATGT+TGG | + | chr3_1:15322400-15322419 | Msa0350320:three_prime_UTR | 30.0% | |
| CGAAGTGAAGAAGAACTAAA+CGG | - | chr3_1:15319356-15319375 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr3_1:15320059-15320078 | None:intergenic | 35.0% |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr3_1:15320071-15320090 | None:intergenic | 35.0% | |
| TCAGTGTAAACATACACTGT+AGG | - | chr3_1:15320288-15320307 | None:intergenic | 35.0% | |
| GATTGCTAGTAGTACATCAA+TGG | - | chr3_1:15320869-15320888 | None:intergenic | 35.0% | |
| !! | TGCCCATTTTAGAAAGAAGA+AGG | + | chr3_1:15321100-15321119 | Msa0350320:intron | 35.0% |
| ! | CAGCCTTCTTCTTTCTAAAA+TGG | - | chr3_1:15321106-15321125 | None:intergenic | 35.0% |
| ATTCAGTTTCTAAACCCCAA+AGG | + | chr3_1:15321239-15321258 | Msa0350320:CDS | 35.0% | |
| ATCTATTGCTGCCAATACTT+GGG | + | chr3_1:15321354-15321373 | Msa0350320:CDS | 35.0% | |
| ATATGCTTACTCTTTGTCTG+AGG | - | chr3_1:15321394-15321413 | None:intergenic | 35.0% | |
| CTAATTGGTGAATGATGTTG+GGG | - | chr3_1:15321799-15321818 | None:intergenic | 35.0% | |
| CCTAATTGGTGAATGATGTT+GGG | - | chr3_1:15321800-15321819 | None:intergenic | 35.0% | |
| ACCTAATTGGTGAATGATGT+TGG | - | chr3_1:15321801-15321820 | None:intergenic | 35.0% | |
| ACAGAAAAACATTCAAGCCT+TGG | - | chr3_1:15322062-15322081 | None:intergenic | 35.0% | |
| CAAGTTCAACAGACAAACTT+AGG | - | chr3_1:15322236-15322255 | None:intergenic | 35.0% | |
| TTGATTGCTACCTCCAATAA+TGG | - | chr3_1:15322274-15322293 | None:intergenic | 35.0% | |
| ! | TTGGAGGTAGCAATCAATTT+TGG | + | chr3_1:15322277-15322296 | Msa0350320:three_prime_UTR | 35.0% |
| ! | TATCTGTATGCTTTGTTGGA+AGG | + | chr3_1:15322457-15322476 | Msa0350320:three_prime_UTR | 35.0% |
| CTAAACGGTGGAAAGAGATA+AGG | - | chr3_1:15319341-15319360 | None:intergenic | 40.0% | |
| AGTGAAGAAGAACTAAACGG+TGG | - | chr3_1:15319353-15319372 | None:intergenic | 40.0% | |
| ATGTTCCTACCTATGAAGCA+CGG | + | chr3_1:15320129-15320148 | Msa0350320:intron | 40.0% | |
| !! | GAAAAGTTGATGAAGATGGC+CGG | + | chr3_1:15320768-15320787 | Msa0350320:CDS | 40.0% |
| CAACTGAAACCTTACCACTT+TGG | + | chr3_1:15320904-15320923 | Msa0350320:intron | 40.0% | |
| ! | CAAAGCACTCTGAAGAGAAT+TGG | + | chr3_1:15321161-15321180 | Msa0350320:CDS | 40.0% |
| CTGAAGAGAATTGGAGTGAA+TGG | + | chr3_1:15321170-15321189 | Msa0350320:CDS | 40.0% | |
| CATCTATTGCTGCCAATACT+TGG | + | chr3_1:15321353-15321372 | Msa0350320:CDS | 40.0% | |
| ACATGGCACACATCATACAA+TGG | - | chr3_1:15321605-15321624 | None:intergenic | 40.0% | |
| TTGTATGATGTGTGCCATGT+TGG | + | chr3_1:15321605-15321624 | Msa0350320:intron | 40.0% | |
| GAGGAAAACAATGCATGGTA+TGG | - | chr3_1:15321663-15321682 | None:intergenic | 40.0% | |
| ! | TATCCTGCAACTCTGAAAGA+GGG | - | chr3_1:15321772-15321791 | None:intergenic | 40.0% |
| ! | ATATCCTGCAACTCTGAAAG+AGG | - | chr3_1:15321773-15321792 | None:intergenic | 40.0% |
| CCCAACATCATTCACCAATT+AGG | + | chr3_1:15321797-15321816 | Msa0350320:CDS | 40.0% | |
| TGTATGTCCACCATTATTGG+AGG | + | chr3_1:15322261-15322280 | Msa0350320:three_prime_UTR | 40.0% | |
| ATTGCTACCTCCAATAATGG+TGG | - | chr3_1:15322271-15322290 | None:intergenic | 40.0% | |
| GATACGAGTGAAATGTCAGA+TGG | - | chr3_1:15322441-15322460 | None:intergenic | 40.0% | |
| CTCGTATCTGTATGCTTTGT+TGG | + | chr3_1:15322453-15322472 | Msa0350320:three_prime_UTR | 40.0% | |
| TCACTTCGCAATCTGTTCCT+AGG | + | chr3_1:15319368-15319387 | Msa0350320:five_prime_UTR | 45.0% | |
| CGCAACCTAACCCTTATCAA+AGG | + | chr3_1:15319393-15319412 | Msa0350320:five_prime_UTR | 45.0% | |
| CGGTACCTTTGATAAGGGTT+AGG | - | chr3_1:15319401-15319420 | None:intergenic | 45.0% | |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr3_1:15319989-15320008 | Msa0350320:intron | 45.0% |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr3_1:15319990-15320009 | Msa0350320:intron | 45.0% |
| TGTTCCTACCTATGAAGCAC+GGG | + | chr3_1:15320130-15320149 | Msa0350320:intron | 45.0% | |
| ACTGTAGGAACCACTAAGCA+CGG | - | chr3_1:15320273-15320292 | None:intergenic | 45.0% | |
| TTCTGTTAGAACCGGTGGAA+AGG | + | chr3_1:15320791-15320810 | Msa0350320:CDS | 45.0% | |
| TCTGTTAGAACCGGTGGAAA+GGG | + | chr3_1:15320792-15320811 | Msa0350320:CDS | 45.0% | |
| TGAAACCTTACCACTTTGGC+TGG | + | chr3_1:15320908-15320927 | Msa0350320:intron | 45.0% | |
| !! | TGTTGACTTCCTCAATGGCA+GGG | - | chr3_1:15321199-15321218 | None:intergenic | 45.0% |
| !! | ATGTTGACTTCCTCAATGGC+AGG | - | chr3_1:15321200-15321219 | None:intergenic | 45.0% |
| ! | GCCAATACTTGGGTTGTTAG+CGG | + | chr3_1:15321364-15321383 | Msa0350320:CDS | 45.0% |
| ACCGCTAACAACCCAAGTAT+TGG | - | chr3_1:15321368-15321387 | None:intergenic | 45.0% | |
| TTTCCCTCTTTCAGAGTTGC+AGG | + | chr3_1:15321766-15321785 | Msa0350320:intron | 45.0% | |
| !! | AGCCTGCTTCTGAAATTGCT+CGG | - | chr3_1:15321939-15321958 | None:intergenic | 45.0% |
| !! | TTAAAAAAAAAAATTTAAAG+TGG | + | chr3_1:15319781-15319800 | Msa0350320:intron | 5.0% |
| ! | AAGGGTTAGGTTGCGAACCT+AGG | - | chr3_1:15319388-15319407 | None:intergenic | 50.0% |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr3_1:15319991-15320010 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr3_1:15319988-15320007 | Msa0350320:intron | 50.0% |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3_1:15319994-15320013 | Msa0350320:intron | 50.0% | |
| TGTCATGTACTGTCCGACAC+CGG | + | chr3_1:15320231-15320250 | Msa0350320:intron | 50.0% | |
| ! | ATGGCCGGTTCTGTTAGAAC+CGG | + | chr3_1:15320783-15320802 | Msa0350320:CDS | 50.0% |
| !! | TCCACCGGTTCTAACAGAAC+CGG | - | chr3_1:15320790-15320809 | None:intergenic | 50.0% |
| TCTGACTGTACCCTTTCCAC+CGG | - | chr3_1:15320805-15320824 | None:intergenic | 50.0% | |
| ! | GTGGAAAGGGTACAGTCAGA+AGG | + | chr3_1:15320805-15320824 | Msa0350320:CDS | 50.0% |
| GATAGCCAGCCAAAGTGGTA+AGG | - | chr3_1:15320916-15320935 | None:intergenic | 50.0% | |
| ACATGGATAGCCAGCCAAAG+TGG | - | chr3_1:15320921-15320940 | None:intergenic | 50.0% | |
| CGTCTGTAGTAGCTGTCTTG+TGG | - | chr3_1:15321130-15321149 | None:intergenic | 50.0% | |
| GAATGGTATCCCTGCCATTG+AGG | + | chr3_1:15321187-15321206 | Msa0350320:CDS | 50.0% | |
| AGCCGAGCAATTTCAGAAGC+AGG | + | chr3_1:15321934-15321953 | Msa0350320:CDS | 50.0% | |
| TGATGCAACTGCAGCACAAG+AGG | + | chr3_1:15321973-15321992 | Msa0350320:CDS | 50.0% | |
| CTGTACCAGATCTTGTCCCT+GGG | + | chr3_1:15322008-15322027 | Msa0350320:CDS | 50.0% | |
| TGTACCAGATCTTGTCCCTG+GGG | + | chr3_1:15322009-15322028 | Msa0350320:CDS | 50.0% | |
| CAGTTTCAAAGGTCTCCCCA+GGG | - | chr3_1:15322027-15322046 | None:intergenic | 50.0% | |
| !! | GACCTTTGAAACTGCTGCTG+AGG | + | chr3_1:15322033-15322052 | Msa0350320:CDS | 50.0% |
| CTCCTCAGCAGCAGTTTCAA+AGG | - | chr3_1:15322038-15322057 | None:intergenic | 50.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr3_1:15319996-15320015 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr3_1:15320002-15320021 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr3_1:15320003-15320022 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr3_1:15320002-15320021 | Msa0350320:intron | 55.0% | |
| GTCATGTACTGTCCGACACC+GGG | + | chr3_1:15320232-15320251 | Msa0350320:intron | 55.0% | |
| CTAGGTGTGTCCGTGCTTAG+TGG | + | chr3_1:15320260-15320279 | Msa0350320:intron | 55.0% | |
| GTTGCATCAGCTCCTGCTTC+AGG | - | chr3_1:15321962-15321981 | None:intergenic | 55.0% | |
| GCTGTACCAGATCTTGTCCC+TGG | + | chr3_1:15322007-15322026 | Msa0350320:CDS | 55.0% | |
| GCAGTTTCAAAGGTCTCCCC+AGG | - | chr3_1:15322028-15322047 | None:intergenic | 55.0% | |
| AACTGCTGCTGAGGAGACCA+AGG | + | chr3_1:15322042-15322061 | Msa0350320:CDS | 55.0% | |
| AGTCGCTTCTGCAAATGGGG+AGG | - | chr3_1:15322486-15322505 | None:intergenic | 55.0% | |
| CGTGCCCGTGCTTCATAGGT+AGG | - | chr3_1:15320137-15320156 | None:intergenic | 60.0% | |
| GTGTCGTGCCCGTGCTTCAT+AGG | - | chr3_1:15320141-15320160 | None:intergenic | 60.0% | |
| CACCTAGTGTGTCCCGGTGT+CGG | - | chr3_1:15320247-15320266 | None:intergenic | 60.0% | |
| CGGACACACCTAGTGTGTCC+CGG | - | chr3_1:15320253-15320272 | None:intergenic | 60.0% | |
| ! | GCCGGTTCTGTTAGAACCGG+TGG | + | chr3_1:15320786-15320805 | Msa0350320:CDS | 60.0% |
| CAGAAGCAGGCTCCTGAAGC+AGG | + | chr3_1:15321947-15321966 | Msa0350320:CDS | 60.0% | |
| GTCTCCCCAGGGACAAGATC+TGG | - | chr3_1:15322016-15322035 | None:intergenic | 60.0% | |
| GTCCGACACCGGGACACACT+AGG | + | chr3_1:15320242-15320261 | Msa0350320:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 15319335 | 15322505 | 15319335 | ID=Msa0350320;Name=Msa0350320 |
| chr3_1 | mRNA | 15319335 | 15322505 | 15319335 | ID=Msa0350320-mRNA-1;Parent=Msa0350320;Name=Msa0350320-mRNA-1;_AED=0.44;_eAED=0.44;_QI=80|1|1|1|0.8|0.66|6|436|159 |
| chr3_1 | exon | 15319335 | 15319414 | 15319335 | ID=Msa0350320-mRNA-1:exon:3732;Parent=Msa0350320-mRNA-1 |
| chr3_1 | exon | 15320759 | 15320826 | 15320759 | ID=Msa0350320-mRNA-1:exon:3733;Parent=Msa0350320-mRNA-1 |
| chr3_1 | exon | 15321112 | 15321260 | 15321112 | ID=Msa0350320-mRNA-1:exon:3734;Parent=Msa0350320-mRNA-1 |
| chr3_1 | exon | 15321347 | 15321403 | 15321347 | ID=Msa0350320-mRNA-1:exon:3735;Parent=Msa0350320-mRNA-1 |
| chr3_1 | exon | 15321780 | 15321818 | 15321780 | ID=Msa0350320-mRNA-1:exon:3736;Parent=Msa0350320-mRNA-1 |
| chr3_1 | exon | 15321903 | 15322505 | 15321903 | ID=Msa0350320-mRNA-1:exon:3737;Parent=Msa0350320-mRNA-1 |
| chr3_1 | five_prime_UTR | 15319335 | 15319414 | 15319335 | ID=Msa0350320-mRNA-1:five_prime_utr;Parent=Msa0350320-mRNA-1 |
| chr3_1 | CDS | 15320759 | 15320826 | 15320759 | ID=Msa0350320-mRNA-1:cds;Parent=Msa0350320-mRNA-1 |
| chr3_1 | CDS | 15321112 | 15321260 | 15321112 | ID=Msa0350320-mRNA-1:cds;Parent=Msa0350320-mRNA-1 |
| chr3_1 | CDS | 15321347 | 15321403 | 15321347 | ID=Msa0350320-mRNA-1:cds;Parent=Msa0350320-mRNA-1 |
| chr3_1 | CDS | 15321780 | 15321818 | 15321780 | ID=Msa0350320-mRNA-1:cds;Parent=Msa0350320-mRNA-1 |
| chr3_1 | CDS | 15321903 | 15322069 | 15321903 | ID=Msa0350320-mRNA-1:cds;Parent=Msa0350320-mRNA-1 |
| chr3_1 | three_prime_UTR | 15322070 | 15322505 | 15322070 | ID=Msa0350320-mRNA-1:three_prime_utr;Parent=Msa0350320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
