AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1453560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1453560 MtrunA17_Chr3g0138791 98.523 1083 16 0 1 1083 1 1083 0.0 2222
Msa1453560 MtrunA17_Chr1g0148321 76.177 1083 258 0 1 1083 1 1083 0.0 1674
Msa1453560 MtrunA17_Chr3g0119031 32.765 293 175 10 107 387 199 481 4.57e-32 135
Msa1453560 MtrunA17_Chr8g0382161 29.524 315 174 9 108 382 24 330 4.66e-32 129
Msa1453560 MtrunA17_Chr1g0170261 33.898 295 161 11 107 383 201 479 1.61e-31 134
Msa1453560 MtrunA17_Chr5g0439971 32.872 289 172 10 107 383 204 482 3.13e-31 132
Msa1453560 MtrunA17_Chr3g0123951 30.476 315 171 11 108 382 24 330 1.44e-30 124
Msa1453560 MtrunA17_Chr6g0458441 30.375 293 177 11 106 383 126 406 3.97e-25 112
Msa1453560 MtrunA17_Chr6g0458421 29.831 295 180 11 106 385 28 310 1.18e-24 110
Msa1453560 MtrunA17_Chr4g0074041 28.283 297 187 9 107 386 92 379 3.01e-24 110
Msa1453560 MtrunA17_Chr5g0411271 27.937 383 250 11 17 385 62 432 5.47e-24 108
Msa1453560 MtrunA17_Chr2g0313171 29.712 313 183 14 106 394 463 762 6.65e-24 108
Msa1453560 MtrunA17_Chr1g0150541 28.523 298 183 10 106 383 180 467 3.57e-22 103
Msa1453560 MtrunA17_Chr5g0427301 28.339 307 170 13 106 383 541 826 8.65e-22 102
Msa1453560 MtrunA17_Chr6g0458431 29.492 295 181 11 106 385 93 375 1.45e-21 100
Msa1453560 MtrunA17_Chr2g0312901 28.477 302 179 10 106 383 21 309 2.46e-21 100
Msa1453560 MtrunA17_Chr8g0366721 27.972 286 183 9 107 385 212 481 3.17e-21 99.4
Msa1453560 MtrunA17_Chr5g0412381 26.370 292 192 9 106 382 423 706 3.58e-18 90.5
Msa1453560 MtrunA17_Chr1g0149991 23.851 348 196 13 98 385 169 507 1.46e-14 78.2
Msa1453560 MtrunA17_Chr8g0365831 24.138 290 198 9 107 385 164 442 2.35e-12 70.9
Msa1453560 MtrunA17_Chr4g0062491 27.442 215 139 6 177 385 73 276 8.24e-12 67.8
Msa1453560 MtrunA17_Chr7g0255591 32.824 131 83 4 255 383 754 881 2.36e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1453560 AT3G49600.2 59.873 1099 391 11 1 1082 1 1066 0.0 1246
Msa1453560 AT3G49600.1 59.873 1099 391 11 1 1082 1 1066 0.0 1246
Msa1453560 AT3G49600.3 59.669 1086 393 11 1 1082 1 1045 0.0 1224
Msa1453560 AT2G22310.1 29.712 313 175 8 108 382 24 329 9.47e-33 131
Msa1453560 AT3G11910.3 30.526 380 208 14 107 470 198 537 2.13e-32 137
Msa1453560 AT3G11910.1 30.526 380 208 14 107 470 198 537 2.13e-32 137
Msa1453560 AT3G11910.4 30.526 380 208 14 107 470 197 536 2.45e-32 137
Msa1453560 AT3G11910.2 30.526 380 208 14 107 470 197 536 2.45e-32 137
Msa1453560 AT4G39910.1 28.616 318 177 9 108 382 24 334 2.58e-32 130
Msa1453560 AT5G06600.3 33.447 293 165 10 107 383 199 477 5.01e-31 132
Msa1453560 AT5G06600.2 33.447 293 165 10 107 383 198 476 5.09e-31 132
Msa1453560 AT5G06600.1 33.447 293 165 10 107 383 199 477 5.55e-31 132
Msa1453560 AT2G22310.3 28.571 301 170 8 120 382 4 297 6.01e-27 113
Msa1453560 AT2G22310.2 28.832 274 152 7 145 382 26 292 1.53e-25 109
Msa1453560 AT5G57990.1 28.231 294 188 7 107 385 107 392 5.95e-25 112
Msa1453560 AT1G17110.2 31.438 299 173 11 105 382 440 727 1.73e-24 111
Msa1453560 AT1G17110.3 31.438 299 173 11 105 382 436 723 1.91e-24 111
Msa1453560 AT1G17110.1 31.438 299 173 11 105 382 436 723 1.91e-24 111
Msa1453560 AT4G31670.1 29.276 304 179 12 105 385 166 456 2.71e-24 109
Msa1453560 AT2G24640.2 29.966 297 180 13 105 382 2 289 4.81e-23 104
Msa1453560 AT2G24640.1 29.966 297 180 13 105 382 172 459 1.07e-22 105
Msa1453560 AT3G14400.1 28.053 303 183 10 106 383 23 315 5.76e-22 102
Msa1453560 AT5G65450.2 28.428 299 178 12 106 382 347 631 6.73e-21 99.4
Msa1453560 AT5G65450.1 28.428 299 178 12 106 382 328 612 7.79e-21 99.4
Msa1453560 AT4G17895.1 27.273 297 184 9 107 385 176 458 1.33e-19 95.1
Msa1453560 AT4G24560.1 25.676 296 191 10 106 382 541 826 1.66e-19 95.5
Msa1453560 AT5G46740.1 27.483 302 185 11 107 386 163 452 2.15e-16 84.7
Msa1453560 AT5G46740.2 29.767 215 129 7 183 386 40 243 4.21e-15 80.1
Msa1453560 AT2G40930.1 36.111 144 85 5 255 395 769 908 1.54e-14 79.0
Msa1453560 AT2G40930.2 36.111 144 85 5 255 395 769 908 1.54e-14 79.0
Msa1453560 AT4G30890.1 24.011 354 183 15 105 386 195 534 5.14e-12 70.5
Msa1453560 AT4G30890.2 24.011 354 183 15 105 386 195 534 5.14e-12 70.5
Msa1453560 AT4G30890.3 24.011 354 183 15 105 386 195 534 5.14e-12 70.5
Msa1453560 AT4G10590.4 34.848 132 82 3 255 385 748 876 8.61e-12 70.1
Msa1453560 AT4G10590.3 34.848 132 82 3 255 385 748 876 8.61e-12 70.1
Msa1453560 AT4G10590.1 34.848 132 82 3 255 385 748 876 8.61e-12 70.1
Msa1453560 AT4G10590.2 34.848 132 82 3 255 385 748 876 8.61e-12 70.1
Msa1453560 AT4G10570.1 35.606 132 81 3 255 385 749 877 1.22e-11 69.7

Find 266 sgRNAs with CRISPR-Local

Find 752 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACACCCTCTATTTCTTTA+TGG 0.093395 tig0034760:+8528 Msa1453560:intergenic
GCCAAGATAAAGGCAAATTT+TGG 0.177532 tig0034760:-2064 Msa1453560:three_prime_UTR
TGATGAGCATGTTACTAATT+TGG 0.185862 tig0034760:-8792 Msa1453560:CDS
GACAGACAGTCGCTTTATTA+AGG 0.199495 tig0034760:+8065 Msa1453560:intergenic
ACAAAAGGTATAAAGGAAAA+TGG 0.201194 tig0034760:-8572 Msa1453560:CDS
GAGGCCTCCAATATTGATTT+AGG 0.212370 tig0034760:+4537 Msa1453560:intergenic
CGCATTTAGGTGCACATATA+TGG 0.235569 tig0034760:-2008 Msa1453560:three_prime_UTR
ATTACCCCATCTAAAGTTTC+AGG 0.247730 tig0034760:+6487 Msa1453560:intergenic
TTTGCCTTTATCTTGGCTTT+AGG 0.261120 tig0034760:+2070 Msa1453560:intergenic
GATAAAATGAATAATGAAAA+TGG 0.270719 tig0034760:-5108 Msa1453560:CDS
CTCCCATAAGCCAGACTTCC+TGG 0.273861 tig0034760:+12259 Msa1453560:intergenic
ATTAAGGGAACCTTTGAAAC+TGG 0.279456 tig0034760:+8081 Msa1453560:intergenic
ACCAATCCACAAAAGCAATT+AGG 0.280923 tig0034760:+12299 Msa1453560:intergenic
CTTCTTCATGGATTTCTAAA+TGG 0.283251 tig0034760:-6549 Msa1453560:CDS
TTAATCAGTTGTATATGATT+TGG 0.285472 tig0034760:-12364 Msa1453560:CDS
TGTGCATTGCAAATATTTCT+TGG 0.294364 tig0034760:-6575 Msa1453560:CDS
TCGTTTAATCATTCATAATC+TGG 0.296433 tig0034760:-13036 Msa1453560:intron
AAATTGTTGTTGTGCTGTTT+AGG 0.297148 tig0034760:+13076 Msa1453560:intergenic
ACCAGCTGAAGATGATGATA+TGG 0.303611 tig0034760:-4413 Msa1453560:CDS
TCCAAAATTTGCCTTTATCT+TGG 0.310409 tig0034760:+2063 Msa1453560:intergenic
GATAAACCTGAAACTTTAGA+TGG 0.312209 tig0034760:-6493 Msa1453560:CDS
AATTGTTGTTGTGCTGTTTA+GGG 0.318354 tig0034760:+13077 Msa1453560:intergenic
TGATGATATGGGAGTCCTTT+GGG 0.319625 tig0034760:-4401 Msa1453560:CDS
ATTTCTTGGTGCCTTCTTCA+TGG 0.329798 tig0034760:-6561 Msa1453560:CDS
TACTAATGGAACACGCATTT+AGG 0.330561 tig0034760:-2021 Msa1453560:three_prime_UTR
CCAATCCACAAAAGCAATTA+GGG 0.331443 tig0034760:+12300 Msa1453560:intergenic
CTAGCTGTTGAAGAGCTTCA+TGG 0.332254 tig0034760:-10921 Msa1453560:CDS
CAAAAGGTATAAAGGAAAAT+GGG 0.346093 tig0034760:-8571 Msa1453560:CDS
ATTTGGAAACCGGTTTGTTC+AGG 0.348274 tig0034760:-12347 Msa1453560:CDS
CGAAGATCATTGTTTGGATC+AGG 0.354872 tig0034760:+12206 Msa1453560:intergenic
GCAGTTACAAGCTAGTAAAA+TGG 0.360073 tig0034760:-12012 Msa1453560:CDS
GTTGTATATGATTTGGAAAC+CGG 0.360166 tig0034760:-12357 Msa1453560:CDS
CCTGCAGGTCTAACAAATCT+TGG 0.360266 tig0034760:-12167 Msa1453560:CDS
GATCCAGGAAGTCTGGCTTA+TGG 0.363577 tig0034760:-12262 Msa1453560:CDS
TCACTAGAAATCCAATAAAA+TGG 0.368904 tig0034760:+8314 Msa1453560:intergenic
ACAGACAGTCGCTTTATTAA+GGG 0.369561 tig0034760:+8066 Msa1453560:intergenic
ATCCAGGAAGTCTGGCTTAT+GGG 0.371782 tig0034760:-12261 Msa1453560:CDS
AATTGTTGCTGATATTCCTT+TGG 0.375294 tig0034760:+5212 Msa1453560:intergenic
TAGACATACAAAAGGTATAA+AGG 0.377697 tig0034760:-8579 Msa1453560:CDS
CCATCATATCTGAGAATGAT+TGG 0.379284 tig0034760:-5269 Msa1453560:CDS
GATGAGCATGTTACTAATTT+GGG 0.387321 tig0034760:-8791 Msa1453560:CDS
AGGTGATAGGATAATTGATA+TGG 0.388738 tig0034760:-2557 Msa1453560:CDS
ATGATGATATGGGAGTCCTT+TGG 0.391187 tig0034760:-4402 Msa1453560:CDS
TCCTCCTAAAGCCAAGATAA+AGG 0.395802 tig0034760:-2074 Msa1453560:three_prime_UTR
CTGCAGGTCTAACAAATCTT+GGG 0.396596 tig0034760:-12166 Msa1453560:CDS
TTTATTGGATTTCTAGTGAC+TGG 0.397450 tig0034760:-8310 Msa1453560:CDS
AAAACACTGGAGTTAGATAA+TGG 0.397749 tig0034760:-11963 Msa1453560:CDS
TATCACCTTTATGTAGGATC+TGG 0.400823 tig0034760:+2572 Msa1453560:intergenic
CCAGACTTCCTGGATCCATT+TGG 0.403099 tig0034760:+12269 Msa1453560:intergenic
GGTCGCTCCAATGGTGGAAC+AGG 0.405663 tig0034760:+8335 Msa1453560:intergenic
GGAAGAGCTGGGCCGCCTAT+AGG 0.406112 tig0034760:+6813 Msa1453560:intergenic
GGAGGTACCTAAATCAATAT+TGG 0.409368 tig0034760:-4544 Msa1453560:CDS
TGTTTCAACTAATCCCTTTG+AGG 0.410567 tig0034760:+4518 Msa1453560:intergenic
TGAACTACTGTTCTTGCCTT+GGG 0.412010 tig0034760:+11864 Msa1453560:intergenic
TGAGTTGTCTCAGTTTGATT+TGG 0.412602 tig0034760:-8921 Msa1453560:CDS
ATGAATAATGAAAATGGAAC+TGG 0.412797 tig0034760:-5102 Msa1453560:CDS
CCAAATGGATCCAGGAAGTC+TGG 0.414558 tig0034760:-12269 Msa1453560:CDS
TTGAACTACTGTTCTTGCCT+TGG 0.416226 tig0034760:+11863 Msa1453560:intergenic
GTCGGGATTGTCTGATATGC+GGG 0.416762 tig0034760:-7373 Msa1453560:CDS
CTTGCACGGGATATTCTTGA+TGG 0.420088 tig0034760:-7293 Msa1453560:CDS
GAATCATGAGAAATTATTCC+AGG 0.421304 tig0034760:-6617 Msa1453560:CDS
AATTTGGGTAACCATCCATT+TGG 0.422569 tig0034760:-8776 Msa1453560:CDS
ATCAATATTGGAGGCCTCAA+AGG 0.424098 tig0034760:-4532 Msa1453560:CDS
GGTTGTTGCCTTAAAACATC+TGG 0.425626 tig0034760:+12065 Msa1453560:intergenic
GTAAAACCTGATGATCCTAT+AGG 0.426401 tig0034760:-6828 Msa1453560:CDS
CTTGATGGGAACTGTCTAGA+TGG 0.428823 tig0034760:-7278 Msa1453560:CDS
TGTAGGAAAATTCACGAAAC+CGG 0.429846 tig0034760:-12407 Msa1453560:intron
GAAGCAATGTCAAGAATTCA+TGG 0.429944 tig0034760:+11925 Msa1453560:intergenic
CTAGAAGATCCTTCGCCAAA+TGG 0.430313 tig0034760:+8761 Msa1453560:intergenic
TATTGAAAGACCTCCTCAAC+TGG 0.434019 tig0034760:-5629 Msa1453560:CDS
GAATCACGAAGATCATTGTT+TGG 0.435219 tig0034760:+12200 Msa1453560:intergenic
AATTGAGTCGTATTACTGAT+AGG 0.438620 tig0034760:-8391 Msa1453560:CDS
CTGCGGAAAATATGCCTTCT+CGG 0.440191 tig0034760:+12090 Msa1453560:intergenic
GCAAGCTCCTGGTGCTAAGC+GGG 0.443611 tig0034760:-6901 Msa1453560:CDS
TTTGTTGTCATACCATGGTC+TGG 0.444062 tig0034760:+7241 Msa1453560:intergenic
AGTTGAAAATTAAGTACGTC+AGG 0.449314 tig0034760:+10825 Msa1453560:intergenic
TTAGCACCAGGAGCTTGCTC+TGG 0.452165 tig0034760:+6906 Msa1453560:intergenic
GATTCAGATAACTTATTGAC+TGG 0.452345 tig0034760:-5177 Msa1453560:CDS
CATGAAAATCGAGATATTGC+GGG 0.452393 tig0034760:-2460 Msa1453560:intron
CCAAGATTTGTTAGACCTGC+AGG 0.453244 tig0034760:+12167 Msa1453560:intergenic
GATTCTGCTGATTCTCCTGC+AGG 0.456525 tig0034760:-12182 Msa1453560:CDS
AGCGACTGTCTGTCAAAGCC+TGG 0.456725 tig0034760:-8056 Msa1453560:CDS
ATTTGTTCATGAACAAGCAT+TGG 0.457998 tig0034760:+12117 Msa1453560:intergenic
TTTGGTCTTCCGGGAGCGCT+TGG 0.461292 tig0034760:+4482 Msa1453560:intergenic
AGATCCTACATAAAGGTGAT+AGG 0.461594 tig0034760:-2570 Msa1453560:CDS
TGCATCAGTTGCAATGGACT+TGG 0.464049 tig0034760:+8730 Msa1453560:intergenic
GAAAACCAGATCCTACATAA+AGG 0.464445 tig0034760:-2577 Msa1453560:CDS
CTTGTCAACAATATAGTCAT+AGG 0.464919 tig0034760:-8424 Msa1453560:CDS
ATTATCTCAAGCAGCATGCT+TGG 0.466951 tig0034760:-6754 Msa1453560:CDS
GACTTCCTGGATCCATTTGG+AGG 0.467973 tig0034760:+12272 Msa1453560:intergenic
CGGATGCAAATATATTTGCC+AGG 0.469412 tig0034760:-2513 Msa1453560:CDS
GCTCCATCTGAAGCTGATGC+TGG 0.473146 tig0034760:-6969 Msa1453560:CDS
TTATCCTATCACCTTTATGT+AGG 0.473429 tig0034760:+2566 Msa1453560:intergenic
TGCTAGCCATAAAGAAATAG+AGG 0.476219 tig0034760:-8534 Msa1453560:CDS
CTCTGAAGCTTCTTCCAAAA+CGG 0.476263 tig0034760:-11012 Msa1453560:CDS
AGGGAATCTGAAGGAAGAGC+TGG 0.477860 tig0034760:+6801 Msa1453560:intergenic
CAGGTTTGTGAAAGTTGCAT+TGG 0.480717 tig0034760:-4645 Msa1453560:CDS
GGGCCGCCTATAGGATCATC+AGG 0.481105 tig0034760:+6822 Msa1453560:intergenic
GCCTTTATCTTGGCTTTAGG+AGG 0.481227 tig0034760:+2073 Msa1453560:intergenic
ACATATCAGCATCTCGTCAC+TGG 0.482260 tig0034760:+5152 Msa1453560:intergenic
CCAATCATTCTCAGATATGA+TGG 0.484479 tig0034760:+5269 Msa1453560:intergenic
TCAATATTGGAGGCCTCAAA+GGG 0.487710 tig0034760:-4531 Msa1453560:CDS
TATAATCCAGCGAGAATCTT+CGG 0.489128 tig0034760:-5590 Msa1453560:intron
ACACGGCAACCTGAACAAAC+CGG 0.489695 tig0034760:+12338 Msa1453560:intergenic
GTTAGATAATGGAGTTCAGC+AGG 0.495729 tig0034760:-11952 Msa1453560:CDS
GTACTGATTCACAAGGGAAC+CGG 0.495972 tig0034760:-8881 Msa1453560:CDS
GGTTTATCTAGATTCTTGAA+TGG 0.499145 tig0034760:+6508 Msa1453560:intergenic
CAATAAAATGGTCGCTCCAA+TGG 0.500683 tig0034760:+8326 Msa1453560:intergenic
TGAGCTCTGCTGTGATAAGA+TGG 0.503034 tig0034760:-2326 Msa1453560:CDS
TACAGCAAACATTTCATCCC+AGG 0.504038 tig0034760:-2263 Msa1453560:CDS
GATATATATCTACTATTGAA+AGG 0.504666 tig0034760:+2225 Msa1453560:intergenic
CAGTGCATTGAGAACACTCT+AGG 0.504747 tig0034760:+6781 Msa1453560:intergenic
ACCAGGCATATTGATTTACA+TGG 0.504903 tig0034760:+2123 Msa1453560:intergenic
CCCATATCATCATCTTCAGC+TGG 0.509650 tig0034760:+4412 Msa1453560:intergenic
CTATAAGCGAAGATTGTGAA+TGG 0.510496 tig0034760:+8645 Msa1453560:intergenic
TGAAGCTCCTGTTCCACCAT+TGG 0.510585 tig0034760:-8342 Msa1453560:CDS
GAGTTAGAGTTGAATGTGAA+GGG 0.510769 tig0034760:-10978 Msa1453560:CDS
ATCTCAAGCAGCATGCTTGG+AGG 0.512613 tig0034760:-6751 Msa1453560:CDS
ATTGTTCTGGAGTACTATGA+AGG 0.513496 tig0034760:-1915 Msa1453560:three_prime_UTR
TGTAATTCTTGTACGTGGTA+AGG 0.516091 tig0034760:-4565 Msa1453560:CDS
GGATTGGTTCCACCTCCAAA+TGG 0.517530 tig0034760:-12284 Msa1453560:CDS
TAGTGACTGGCTTCGCCAGT+GGG 0.518041 tig0034760:-8297 Msa1453560:CDS
CCAGCTGAAGATGATGATAT+GGG 0.518208 tig0034760:-4412 Msa1453560:CDS
AGGGCATTTCTTAGACAACC+TGG 0.522307 tig0034760:+2245 Msa1453560:intergenic
GATATGCTTCTGTGAAGAAT+GGG 0.522533 tig0034760:-5247 Msa1453560:CDS
GGATATGCTTCTGTGAAGAA+TGG 0.522727 tig0034760:-5248 Msa1453560:CDS
ATAAACCTGAAACTTTAGAT+GGG 0.523119 tig0034760:-6492 Msa1453560:CDS
AACTTACCGAAGATTCTCGC+TGG 0.523969 tig0034760:+5584 Msa1453560:intergenic
CTGTTTAGGGTGGAAATTGA+AGG 0.524950 tig0034760:+13090 Msa1453560:intergenic
TATCTCATGATGACCATTGT+CGG 0.527605 tig0034760:-7391 Msa1453560:CDS
TTCTCCCTTTGTGAAAACAC+TGG 0.528353 tig0034760:-11976 Msa1453560:CDS
TGGGAAAGTCCCAGTTTCAA+AGG 0.528599 tig0034760:-8091 Msa1453560:CDS
ATCTCATGATGACCATTGTC+GGG 0.529145 tig0034760:-7390 Msa1453560:CDS
TGTTGTTGTGCTGTTTAGGG+TGG 0.529372 tig0034760:+13080 Msa1453560:intergenic
GTTATGATATTGTAGGGGCT+CGG 0.529496 tig0034760:-12615 Msa1453560:intron
CAAGCATTGGAGTATTCCAT+TGG 0.530496 tig0034760:+12130 Msa1453560:intergenic
AGCAAGCTCCTGGTGCTAAG+CGG 0.530924 tig0034760:-6902 Msa1453560:CDS
ATCATTGAAGTCACTTGCAC+GGG 0.534356 tig0034760:-7306 Msa1453560:CDS
TACCATCTTAGACATACAAA+AGG 0.535788 tig0034760:-8587 Msa1453560:CDS
GGACTTTCCCATGTGAACAT+TGG 0.538054 tig0034760:+8103 Msa1453560:intergenic
TTATCTAGATTCTTGAATGG+TGG 0.538229 tig0034760:+6511 Msa1453560:intergenic
AAGGGAACCGGTGTTAATAG+TGG 0.539334 tig0034760:-8869 Msa1453560:CDS
TTAAGGGAACCTTTGAAACT+GGG 0.539384 tig0034760:+8082 Msa1453560:intergenic
CTTGGAGAACAACTTGTCCC+AGG 0.539622 tig0034760:+8038 Msa1453560:intergenic
GGCGGATTTCCAAGCGCTCC+CGG 0.539773 tig0034760:-4491 Msa1453560:CDS
TTCCACCTCCAAATGGATCC+AGG 0.539794 tig0034760:-12277 Msa1453560:CDS
TGCCGCATATCAAGTTGTGC+AGG 0.541411 tig0034760:+8953 Msa1453560:intergenic
GCAAGGATAGCTGAAAGTAA+TGG 0.542561 tig0034760:-8686 Msa1453560:CDS
ATATATATCTACTATTGAAA+GGG 0.542622 tig0034760:+2226 Msa1453560:intergenic
TTGATGCCAGAGCAAGCTCC+TGG 0.544653 tig0034760:-6912 Msa1453560:CDS
TTTCCCATGTGAACATTGGA+TGG 0.545137 tig0034760:+8107 Msa1453560:intergenic
ATAAGCACCCGCTTAGCACC+AGG 0.545648 tig0034760:+6894 Msa1453560:intergenic
GCCATGTAAATCAATATGCC+TGG 0.545668 tig0034760:-2124 Msa1453560:three_prime_UTR
GGTTATCTTTCGTGTTTACA+CGG 0.546207 tig0034760:+12321 Msa1453560:intergenic
TGAGTTAGAGTTGAATGTGA+AGG 0.547401 tig0034760:-10979 Msa1453560:CDS
GTTGCAAAATTCAGTATGGT+GGG 0.547879 tig0034760:-7424 Msa1453560:intron
TAAAATGGTCGCTCCAATGG+TGG 0.551455 tig0034760:+8329 Msa1453560:intergenic
GGTTGCAAAATTCAGTATGG+TGG 0.551948 tig0034760:-7425 Msa1453560:intron
TTTGTCATCCCAGGTTGTCA+AGG 0.553144 tig0034760:-2599 Msa1453560:intron
GGGGCAACGTGTTACGCCAA+TGG 0.553293 tig0034760:-12146 Msa1453560:CDS
CTAGTGACTGGCTTCGCCAG+TGG 0.553304 tig0034760:-8298 Msa1453560:CDS
CCTCACTATAATCTGATCCC+TGG 0.553369 tig0034760:+2495 Msa1453560:intergenic
GAATAATGTTGTCAGCCCAC+TGG 0.553415 tig0034760:+8282 Msa1453560:intergenic
TTCCTGGATCCATTTGGAGG+TGG 0.554634 tig0034760:+12275 Msa1453560:intergenic
CCATTACATTGCTCACATCA+AGG 0.555461 tig0034760:-8846 Msa1453560:CDS
ATCTCATCATAAAGATGAGA+AGG 0.556287 tig0034760:+8476 Msa1453560:intergenic
GGTACCTAAATCAATATTGG+AGG 0.557329 tig0034760:-4541 Msa1453560:CDS
TTGACAAGCATCAAGATATG+AGG 0.557882 tig0034760:+8439 Msa1453560:intergenic
ACGTTGTGTCTTTCTTCCAA+AGG 0.558131 tig0034760:-10799 Msa1453560:intron
CCATGAAAATCGAGATATTG+CGG 0.561567 tig0034760:-2461 Msa1453560:CDS
GTGAATTGCATCAGTTGCAA+TGG 0.561891 tig0034760:+8724 Msa1453560:intergenic
CAAATATATTTGCATCCGCA+AGG 0.563963 tig0034760:+2518 Msa1453560:intergenic
AAAAGGTATAAAGGAAAATG+GGG 0.565072 tig0034760:-8570 Msa1453560:CDS
TATAAGCGAAGATTGTGAAT+GGG 0.565429 tig0034760:+8646 Msa1453560:intergenic
TCTTCTACCACGATAGGTAT+CGG 0.566904 tig0034760:+7331 Msa1453560:intergenic
CTCAACAGTAGGAAAGCACC+AGG 0.567230 tig0034760:+2106 Msa1453560:intergenic
ATAGCTGAAAGTAATGGAAA+CGG 0.568044 tig0034760:-8680 Msa1453560:CDS
GAAGATCATTGTTTGGATCA+GGG 0.568664 tig0034760:+12207 Msa1453560:intergenic
AATCATTGAAGTCACTTGCA+CGG 0.569743 tig0034760:-7307 Msa1453560:CDS
GAATGAGTAGGCCGACGACT+CGG 0.570524 tig0034760:-12576 Msa1453560:CDS
ATGAACAAATTATTCCGAGA+AGG 0.570946 tig0034760:-12104 Msa1453560:CDS
AGTGTTTAAATATATGAATG+AGG 0.571382 tig0034760:-1975 Msa1453560:three_prime_UTR
TGCGTGTTCCATTAGTAACT+AGG 0.571431 tig0034760:+2027 Msa1453560:intergenic
CATGAAGCTCTTCAACAGCT+AGG 0.573761 tig0034760:+10922 Msa1453560:intergenic
CAGGGATCAGATTATAGTGA+GGG 0.575538 tig0034760:-2494 Msa1453560:CDS
CATTTAGAAATCCATGAAGA+AGG 0.576248 tig0034760:+6550 Msa1453560:intergenic
TTGCACGGGATATTCTTGAT+GGG 0.577352 tig0034760:-7292 Msa1453560:CDS
TGATTCTCTTCTACCACGAT+AGG 0.581095 tig0034760:+7325 Msa1453560:intergenic
GCATCCATCCAATGTTCACA+TGG 0.581290 tig0034760:-8111 Msa1453560:CDS
CTTGGCTTTAGGAGGACAAG+TGG 0.583374 tig0034760:+2081 Msa1453560:intergenic
ACTCTGACTGCTCTGAAGCA+AGG 0.588323 tig0034760:-8703 Msa1453560:CDS
TAAGCTAACTTATTGTCACC+AGG 0.588496 tig0034760:-1773 Msa1453560:three_prime_UTR
TTGTTCTGGAGTACTATGAA+GGG 0.593089 tig0034760:-1914 Msa1453560:three_prime_UTR
GATATGCGGGGCTCAGACAG+TGG 0.593620 tig0034760:-7360 Msa1453560:CDS
GCGACTGTCTGTCAAAGCCT+GGG 0.593682 tig0034760:-8055 Msa1453560:CDS
AAGATCCTTCGCCAAATGGA+TGG 0.594904 tig0034760:+8765 Msa1453560:intergenic
CTTCAGCTGGTATAGTGATG+TGG 0.597284 tig0034760:+4425 Msa1453560:intergenic
CCTTAAAACATCTGGTTCTG+CGG 0.597673 tig0034760:+12073 Msa1453560:intergenic
AGTCCAGCATCAGCTTCAGA+TGG 0.598828 tig0034760:+6966 Msa1453560:intergenic
TGTCGGGATTGTCTGATATG+CGG 0.599563 tig0034760:-7374 Msa1453560:CDS
AGGGATTAGTTGAAACAGAT+CGG 0.600129 tig0034760:-4512 Msa1453560:CDS
GGTAACCATCCATTTGGCGA+AGG 0.602048 tig0034760:-8770 Msa1453560:CDS
TGATTCGCTGATGTGTGAAA+AGG 0.604887 tig0034760:-6464 Msa1453560:intron
TATTTGCAATGCACAGAGAG+TGG 0.609253 tig0034760:+6583 Msa1453560:intergenic
TGGTCATCATGAGATAGTGT+TGG 0.609641 tig0034760:+7398 Msa1453560:intergenic
CTGGGACAAGTTGTTCTCCA+AGG 0.610715 tig0034760:-8037 Msa1453560:intron
TACATGATAACTTCAATACC+TGG 0.611871 tig0034760:+1755 Msa1453560:intergenic
AAATATATTTGCATCCGCAA+GGG 0.613081 tig0034760:+2519 Msa1453560:intergenic
CCTTGATGTGAGCAATGTAA+TGG 0.615711 tig0034760:+8846 Msa1453560:intergenic
GATATGCAGCATACTGAGGA+AGG 0.616872 tig0034760:-2304 Msa1453560:CDS
AATAGCTACAGTGTAAACTC+TGG 0.619131 tig0034760:-1814 Msa1453560:three_prime_UTR
TTCCTGCACAACTTGATATG+CGG 0.619171 tig0034760:-8955 Msa1453560:CDS
CCGCGTCTGAAAACCAGTTG+AGG 0.620247 tig0034760:+5616 Msa1453560:intergenic
GGATGCAAATATATTTGCCA+GGG 0.620793 tig0034760:-2512 Msa1453560:CDS
GAGTCATTCTAAAGTTCCCA+AGG 0.622537 tig0034760:-11880 Msa1453560:CDS
GGGCATTTCTTAGACAACCT+GGG 0.624637 tig0034760:+2246 Msa1453560:intergenic
AAGATTGTGAATGGGTGGTG+TGG 0.625514 tig0034760:+8654 Msa1453560:intergenic
GGGAATCTGAAGGAAGAGCT+GGG 0.625601 tig0034760:+6802 Msa1453560:intergenic
AGTGCATTGAGAACACTCTA+GGG 0.625728 tig0034760:+6782 Msa1453560:intergenic
ATAGAGTTTACTTACCCCAA+AGG 0.631817 tig0034760:+4386 Msa1453560:intergenic
ACTTATATCATAGAATGAGT+AGG 0.634776 tig0034760:-12588 Msa1453560:exon
TTTGATCAAGACTTGTCCTG+AGG 0.635650 tig0034760:-5073 Msa1453560:intron
CATGCTTGGAGGACTCCTTG+AGG 0.642504 tig0034760:-6740 Msa1453560:intron
CCAGGGATCAGATTATAGTG+AGG 0.644003 tig0034760:-2495 Msa1453560:CDS
ATATCAGACAATCCCGACAA+TGG 0.646323 tig0034760:+7378 Msa1453560:intergenic
GACAAGTGGTGCTCAACAGT+AGG 0.649369 tig0034760:+2095 Msa1453560:intergenic
TGCAGGTCTAACAAATCTTG+GGG 0.650786 tig0034760:-12165 Msa1453560:CDS
GATGATATGGGAGTCCTTTG+GGG 0.652967 tig0034760:-4400 Msa1453560:intron
AGTATTTCATATCCAGACCA+TGG 0.654494 tig0034760:-7253 Msa1453560:intron
AAATCAAACTGAGACAACTC+AGG 0.658104 tig0034760:+8923 Msa1453560:intergenic
TAAACCTGAAACTTTAGATG+GGG 0.660198 tig0034760:-6491 Msa1453560:CDS
CTATGTAGGTGCTCACAATG+TGG 0.661924 tig0034760:-11041 Msa1453560:intron
GTGTCTGTACTAATGAAACA+TGG 0.663418 tig0034760:-12519 Msa1453560:CDS
AATTCTTGTACGTGGTAAGG+AGG 0.663439 tig0034760:-4562 Msa1453560:CDS
TGGGGTGGTTCTGAGACCAA+AGG 0.664541 tig0034760:-5228 Msa1453560:CDS
GCTAGCCATAAAGAAATAGA+GGG 0.665488 tig0034760:-8533 Msa1453560:CDS
GTAATGGCCACTATTAACAC+CGG 0.665878 tig0034760:+8862 Msa1453560:intergenic
TCGGGATTGTCTGATATGCG+GGG 0.668065 tig0034760:-7372 Msa1453560:CDS
CGTCTGAAAACCAGTTGAGG+AGG 0.668525 tig0034760:+5619 Msa1453560:intergenic
GAACACTCTAGGGAATCTGA+AGG 0.673430 tig0034760:+6792 Msa1453560:intergenic
GATGGATATGCAGCATACTG+AGG 0.676455 tig0034760:-2308 Msa1453560:CDS
TAAACTTAACTATTGCAATG+AGG 0.676896 tig0034760:-4595 Msa1453560:CDS
GTTTAAATATATGAATGAGG+AGG 0.677347 tig0034760:-1972 Msa1453560:three_prime_UTR
CGAGCTAGTTGATCTAACAC+CGG 0.683260 tig0034760:+12044 Msa1453560:intergenic
CATCCATCCAATGTTCACAT+GGG 0.684017 tig0034760:-8110 Msa1453560:CDS
ATCATCTTCAGTAACCACAC+CGG 0.688576 tig0034760:+12388 Msa1453560:intergenic
GAAAATTCACGAAACCGGTG+TGG 0.691976 tig0034760:-12402 Msa1453560:CDS
GTCAGCTGTACTGATTCACA+AGG 0.692251 tig0034760:-8888 Msa1453560:CDS
AAACCTGATGATCCTATAGG+CGG 0.694217 tig0034760:-6825 Msa1453560:CDS
TGATGAATGTGCTACCCTTG+CGG 0.694487 tig0034760:-2533 Msa1453560:CDS
TCACATGAGATACACTTCCG+CGG 0.694664 tig0034760:+11832 Msa1453560:intergenic
AAAGGTATAAAGGAAAATGG+GGG 0.698694 tig0034760:-8569 Msa1453560:CDS
ATGTGAGGATCAGTCACACA+CGG 0.706073 tig0034760:-5133 Msa1453560:CDS
GATTAGTTGAAACAGATCGG+CGG 0.709476 tig0034760:-4509 Msa1453560:CDS
AAGCGAAGATTGTGAATGGG+TGG 0.712559 tig0034760:+8649 Msa1453560:intergenic
GTATCAGCCGATACCTATCG+TGG 0.714071 tig0034760:-7338 Msa1453560:CDS
TGCTTCTGTGAAGAATGGGG+TGG 0.717515 tig0034760:-5243 Msa1453560:CDS
ATATGTGTAATTCTTGTACG+TGG 0.720220 tig0034760:-4570 Msa1453560:CDS
GCAGCAATTAGTTGTCCACA+CGG 0.721875 tig0034760:-6939 Msa1453560:CDS
ACACAGCTTGATGCTGCGAG+TGG 0.727435 tig0034760:+10854 Msa1453560:intergenic
TGACGAGATGCTGATATGTG+AGG 0.739206 tig0034760:-5148 Msa1453560:CDS
ATATGCTTCTGTGAAGAATG+GGG 0.741161 tig0034760:-5246 Msa1453560:CDS
TCTGGCATCAATAGACCGTG+TGG 0.742783 tig0034760:+6924 Msa1453560:intergenic
TCAGCTGTACTGATTCACAA+GGG 0.768028 tig0034760:-8887 Msa1453560:CDS
TCTGTACTAATGAAACATGG+AGG 0.772698 tig0034760:-12516 Msa1453560:intron
TGAGGATCAGTCACACACGG+AGG 0.800612 tig0034760:-5130 Msa1453560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG + tig0034760:3351-3370 Msa1453560:intergenic 10.0%
!! TAAGAAAAATGTATAAATAA+AGG + tig0034760:3352-3371 Msa1453560:intergenic 10.0%
!! AATATAAAATTGAAAAATAG+CGG + tig0034760:3426-3445 Msa1453560:intergenic 10.0%
!!! TTACTTGTTTATTTTTTATA+GGG + tig0034760:9452-9471 Msa1453560:intergenic 10.0%
!!! TTTACTTGTTTATTTTTTAT+AGG + tig0034760:9453-9472 Msa1453560:intergenic 10.0%
!!! AAATGTATCTTTTTTATTTT+AGG - tig0034760:11593-11612 Msa1453560:intron 10.0%
!! TTCAATTATAAAACTTTGTA+AGG + tig0034760:2251-2270 Msa1453560:intergenic 15.0%
!! TAAAAATAAAAGACAAAAAC+AGG - tig0034760:2342-2361 Msa1453560:intron 15.0%
!! AAAAATAAAAGACAAAAACA+GGG - tig0034760:2343-2362 Msa1453560:intron 15.0%
!! AATTAGAGTTATATTGTATT+GGG + tig0034760:3286-3305 Msa1453560:intergenic 15.0%
!! TAATTAGAGTTATATTGTAT+TGG + tig0034760:3287-3306 Msa1453560:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG + tig0034760:3350-3369 Msa1453560:intergenic 15.0%
!!! TGTTTTTGAAAAATATTTGT+GGG + tig0034760:3472-3491 Msa1453560:intergenic 15.0%
!!! TCAATTTTCATATTTTGTTA+TGG - tig0034760:4137-4156 Msa1453560:intron 15.0%
!! TTAAAAATCGTAATTACATA+GGG + tig0034760:4441-4460 Msa1453560:intergenic 15.0%
!!! AAAAATGATTTAAGGTTTTT+CGG + tig0034760:4804-4823 Msa1453560:intergenic 15.0%
!! AAATAAGATATGATAACTTA+TGG + tig0034760:8625-8644 Msa1453560:intergenic 15.0%
!!! CTTAGTTTATGTAAAATTTT+GGG + tig0034760:9030-9049 Msa1453560:intergenic 15.0%
!! GATAAAATGAATAATGAAAA+TGG - tig0034760:9785-9804 Msa1453560:intron 15.0%
!! ATTCTTTAGATATTAAATCA+TGG - tig0034760:9893-9912 Msa1453560:intron 15.0%
!!! AAATGAATTCTTTAACATTT+TGG - tig0034760:10594-10613 Msa1453560:intron 15.0%
!!! AATGAATTCTTTAACATTTT+GGG - tig0034760:10595-10614 Msa1453560:intron 15.0%
!! TTGTAATACATTCTATTATT+TGG - tig0034760:11310-11329 Msa1453560:intron 15.0%
!!! AACTAATTAATTTTGAATGT+TGG - tig0034760:11524-11543 Msa1453560:intron 15.0%
!! ATATATATCTACTATTGAAA+GGG + tig0034760:12670-12689 Msa1453560:intergenic 15.0%
!! TATCATTTATCATCATATCA+TGG + tig0034760:2184-2203 Msa1453560:intergenic 20.0%
!! ATGAATTGTTATGATATTGT+AGG - tig0034760:2271-2290 Msa1453560:CDS 20.0%
!! TGAATTGTTATGATATTGTA+GGG - tig0034760:2272-2291 Msa1453560:CDS 20.0%
!!! TTAAAATCACTTTTTAGCTT+TGG - tig0034760:2433-2452 Msa1453560:intron 20.0%
!! TTAATCAGTTGTATATGATT+TGG - tig0034760:2529-2548 Msa1453560:CDS 20.0%
!! AAAAAACTAGGAATATTGTA+TGG + tig0034760:3143-3162 Msa1453560:intergenic 20.0%
!! AAAGTGGAATATATTGAATT+GGG + tig0034760:3327-3346 Msa1453560:intergenic 20.0%
!!! CTGTTTTTGAAAAATATTTG+TGG + tig0034760:3473-3492 Msa1453560:intergenic 20.0%
!!! CACAAATATTTTTCAAAAAC+AGG - tig0034760:3471-3490 Msa1453560:intron 20.0%
!! AAATTGATTATGAAGTTCAT+CGG + tig0034760:4124-4143 Msa1453560:intergenic 20.0%
!! TTATTATACATTCTGTTGTA+TGG - tig0034760:4215-4234 Msa1453560:intron 20.0%
!! TTCTTCATAAGATAGTTATA+AGG + tig0034760:4309-4328 Msa1453560:intergenic 20.0%
!!! AGTCTTATTTAATGATCTAA+TGG - tig0034760:4394-4413 Msa1453560:intron 20.0%
!! CTTAAAAATCGTAATTACAT+AGG + tig0034760:4442-4461 Msa1453560:intergenic 20.0%
!!! ACTTATATAATCACATTTTC+AGG + tig0034760:4489-4508 Msa1453560:intergenic 20.0%
!! TGAAAATGTGATTATATAAG+TGG - tig0034760:4488-4507 Msa1453560:CDS 20.0%
!!! GTTTTGATTATGCTTTTTTA+TGG - tig0034760:4946-4965 Msa1453560:intron 20.0%
!! AAGAGAGAAAAATTCTTTAA+TGG - tig0034760:5066-5085 Msa1453560:intron 20.0%
!!! TGTGACTTTAAAATATGAAA+TGG - tig0034760:5493-5512 Msa1453560:intron 20.0%
!!! TAAAATAAAGTTCTGACATT+TGG + tig0034760:5559-5578 Msa1453560:intergenic 20.0%
!! AACAAGTCAAGTAAAAAAAA+GGG + tig0034760:5776-5795 Msa1453560:intergenic 20.0%
!! TTGCAGAATTATATATAACA+AGG + tig0034760:7773-7792 Msa1453560:intergenic 20.0%
!!! TTTTTTTCGTCTTATTATAC+TGG - tig0034760:7819-7838 Msa1453560:intron 20.0%
!!! CTATATTAGCTCTATATTAA+TGG + tig0034760:8197-8216 Msa1453560:intergenic 20.0%
!!! ACACTTGTTAAAAAATAATC+CGG - tig0034760:8710-8729 Msa1453560:CDS 20.0%
!!! GCTTAGTTTATGTAAAATTT+TGG + tig0034760:9031-9050 Msa1453560:intergenic 20.0%
!!! AAATCATTAAAAAGCATTCT+TGG - tig0034760:10659-10678 Msa1453560:intron 20.0%
!!! AATCATTAAAAAGCATTCTT+GGG - tig0034760:10660-10679 Msa1453560:intron 20.0%
!! AAATTTAAATAAGTTCTCTC+AGG - tig0034760:11396-11415 Msa1453560:intron 20.0%
!!! TTAAAGGATGTTCTTATTTA+AGG - tig0034760:11768-11787 Msa1453560:intron 20.0%
!!! ATATTAACGGATAAAATTTG+TGG - tig0034760:11893-11912 Msa1453560:CDS 20.0%
!!! TATTAACGGATAAAATTTGT+GGG - tig0034760:11894-11913 Msa1453560:CDS 20.0%
!!! TTTAACCTCTTTTATGAAAT+CGG - tig0034760:12047-12066 Msa1453560:CDS 20.0%
!!! ATGAATTTTTTTCTAATGTC+AGG - tig0034760:12191-12210 Msa1453560:CDS 20.0%
!! TTGAAATTTAGACATTATGA+AGG + tig0034760:12274-12293 Msa1453560:intergenic 20.0%
!! GATATATATCTACTATTGAA+AGG + tig0034760:12671-12690 Msa1453560:intergenic 20.0%
!!! TATATATCTGACATCTTTTT+TGG - tig0034760:12683-12702 Msa1453560:intron 20.0%
!! AGTGTTTAAATATATGAATG+AGG - tig0034760:12918-12937 Msa1453560:intron 20.0%
!!! TTTTTTTAGTAAATCGTTAG+CGG - tig0034760:13045-13064 Msa1453560:five_prime_UTR 20.0%
! TCGTTTAATCATTCATAATC+TGG - tig0034760:1857-1876 Msa1453560:three_prime_UTR 25.0%
!! AATTAAAAAGCACGTTAAAC+TGG + tig0034760:1924-1943 Msa1453560:intergenic 25.0%
!!! TTTTTCAATTCAGCTTAGTT+AGG + tig0034760:2076-2095 Msa1453560:intergenic 25.0%
! CTTTGTAAGGTAACAAAAAA+AGG + tig0034760:2238-2257 Msa1453560:intergenic 25.0%
! GAATTGTTATGATATTGTAG+GGG - tig0034760:2273-2292 Msa1453560:CDS 25.0%
! ACTTATATCATAGAATGAGT+AGG - tig0034760:2305-2324 Msa1453560:CDS 25.0%
!! AATTTTCCTACAAAAATGGA+AGG + tig0034760:2478-2497 Msa1453560:intergenic 25.0%
! TAACAGGCAATAAAAAAACT+AGG + tig0034760:3155-3174 Msa1453560:intergenic 25.0%
!!! GTTTTTTTATTGCCTGTTAT+AGG - tig0034760:3156-3175 Msa1453560:intron 25.0%
! GTATTTGAAAAACCTATAAC+AGG + tig0034760:3171-3190 Msa1453560:intergenic 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG + tig0034760:3239-3258 Msa1453560:intergenic 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG + tig0034760:3240-3259 Msa1453560:intergenic 25.0%
! GAAAGTGGAATATATTGAAT+TGG + tig0034760:3328-3347 Msa1453560:intergenic 25.0%
!! ATTATTGGTGATTGTTCTTA+AGG + tig0034760:3497-3516 Msa1453560:intergenic 25.0%
! GATTCTCTTCTATAATAACA+AGG - tig0034760:3600-3619 Msa1453560:intron 25.0%
! GTCGTATAATTAAAAGAGAT+GGG + tig0034760:3829-3848 Msa1453560:intergenic 25.0%
! AGTCGTATAATTAAAAGAGA+TGG + tig0034760:3830-3849 Msa1453560:intergenic 25.0%
! AATTATACGACTTACTATGT+AGG - tig0034760:3838-3857 Msa1453560:intron 25.0%
! AGTATTAAATAGAGAATGAC+AGG - tig0034760:4278-4297 Msa1453560:intron 25.0%
! GTATTAAATAGAGAATGACA+GGG - tig0034760:4279-4298 Msa1453560:intron 25.0%
! TGAAGAAAAATTAGCTGTAA+CGG - tig0034760:4322-4341 Msa1453560:intron 25.0%
!!! GATTTTTAAGAGTCCTATAT+TGG - tig0034760:4452-4471 Msa1453560:CDS 25.0%
! AGCCATATCTCATTTAATAT+GGG + tig0034760:4665-4684 Msa1453560:intergenic 25.0%
! AAGCCATATCTCATTTAATA+TGG + tig0034760:4666-4685 Msa1453560:intergenic 25.0%
!!! TGTACTCGTTTTTAGAATTT+GGG + tig0034760:4710-4729 Msa1453560:intergenic 25.0%
!!! ATTCTAACTTTTTAGAAACC+TGG - tig0034760:4731-4750 Msa1453560:intron 25.0%
!!! TTTTTTATGGTTTCATTCAG+TGG - tig0034760:4959-4978 Msa1453560:intron 25.0%
!! TTTTTATGGTTTCATTCAGT+GGG - tig0034760:4960-4979 Msa1453560:intron 25.0%
! TTAAAAAACAGAGAAAAGCA+CGG + tig0034760:5010-5029 Msa1453560:intergenic 25.0%
!! TCAATTTGAACAAGTCTTTT+AGG - tig0034760:5404-5423 Msa1453560:intron 25.0%
!! CAATTTGAACAAGTCTTTTA+GGG - tig0034760:5405-5424 Msa1453560:intron 25.0%
!! AATTTGAACAAGTCTTTTAG+GGG - tig0034760:5406-5425 Msa1453560:intron 25.0%
! ACAAGTCAAGTAAAAAAAAG+GGG + tig0034760:5775-5794 Msa1453560:intergenic 25.0%
! CAACAAGTCAAGTAAAAAAA+AGG + tig0034760:5777-5796 Msa1453560:intergenic 25.0%
! TAAGGATGGTTATTCTTTAA+CGG - tig0034760:5802-5821 Msa1453560:intron 25.0%
!! TAGACATACAAAAGGTATAA+AGG - tig0034760:6314-6333 Msa1453560:intron 25.0%
!! ACAAAAGGTATAAAGGAAAA+TGG - tig0034760:6321-6340 Msa1453560:intron 25.0%
!! CAAAAGGTATAAAGGAAAAT+GGG - tig0034760:6322-6341 Msa1453560:intron 25.0%
!! AAAAGGTATAAAGGAAAATG+GGG - tig0034760:6323-6342 Msa1453560:intron 25.0%
! TCACTAGAAATCCAATAAAA+TGG + tig0034760:6582-6601 Msa1453560:intergenic 25.0%
!! ATTTTTGTACAGTATTACAG+TGG - tig0034760:6648-6667 Msa1453560:intron 25.0%
! TTTGTTTGCTTTGATATGTT+TGG - tig0034760:6888-6907 Msa1453560:CDS 25.0%
!! AGGAGTGTATTTATATTTGA+TGG - tig0034760:6965-6984 Msa1453560:CDS 25.0%
! TAAGAAAATTGGAGTCATAT+GGG - tig0034760:7177-7196 Msa1453560:intron 25.0%
!!! AAAAGTGTTTTGTTTATGTG+AGG - tig0034760:7241-7260 Msa1453560:intron 25.0%
! TGAATCAGTATCTAACAAAA+AGG - tig0034760:7290-7309 Msa1453560:CDS 25.0%
!!! TAAACACTGATGCTTTTTTA+CGG - tig0034760:7342-7361 Msa1453560:CDS 25.0%
! ACAATAGAGAAACAACAATT+TGG + tig0034760:7393-7412 Msa1453560:intergenic 25.0%
!! CATGACACTTTAACTTTATT+GGG - tig0034760:7447-7466 Msa1453560:intron 25.0%
!! GTGTTCTATTTCTTGTATTT+AGG - tig0034760:7721-7740 Msa1453560:intron 25.0%
! TATATATAACAAGGTCCAAT+CGG + tig0034760:7764-7783 Msa1453560:intergenic 25.0%
!!! GCTGATGAGTATATTTTTTA+AGG - tig0034760:7868-7887 Msa1453560:intron 25.0%
! TTACAAATGAAATAACCTCA+AGG + tig0034760:8171-8190 Msa1453560:intergenic 25.0%
! ATAAACCTGAAACTTTAGAT+GGG - tig0034760:8401-8420 Msa1453560:CDS 25.0%
!!! TGTTATTTTACTCTGCAATT+TGG - tig0034760:8457-8476 Msa1453560:CDS 25.0%
!!! TCTTATTTTGATCCATAGTA+TGG - tig0034760:8637-8656 Msa1453560:CDS 25.0%
!!! CTTATTTTGATCCATAGTAT+GGG - tig0034760:8638-8657 Msa1453560:CDS 25.0%
!!! TTATTTTGATCCATAGTATG+GGG - tig0034760:8639-8658 Msa1453560:CDS 25.0%
!! ATTTTACATAAACTAAGCCA+AGG - tig0034760:9033-9052 Msa1453560:intron 25.0%
!!! TTCAACATAAGAATTTGCTA+GGG + tig0034760:9215-9234 Msa1453560:intergenic 25.0%
!! ATTCAACATAAGAATTTGCT+AGG + tig0034760:9216-9235 Msa1453560:intergenic 25.0%
!!! AAATTTCCATCTGTTTTTTG+TGG - tig0034760:9581-9600 Msa1453560:intron 25.0%
! ATGAATAATGAAAATGGAAC+TGG - tig0034760:9791-9810 Msa1453560:intron 25.0%
! AGAACAAAAAAATTCTCAGA+CGG + tig0034760:9963-9982 Msa1453560:intergenic 25.0%
!! AATGTTGCTTAATGAATCTA+TGG - tig0034760:9989-10008 Msa1453560:intron 25.0%
!! TTACCAGAAACTTCTTTTAT+TGG - tig0034760:10173-10192 Msa1453560:intron 25.0%
! AATCCAATAAAAGAAGTTTC+TGG + tig0034760:10179-10198 Msa1453560:intergenic 25.0%
! TAAACTTAACTATTGCAATG+AGG - tig0034760:10298-10317 Msa1453560:intron 25.0%
!! AACATAAGAGATCTTTTGAT+AGG - tig0034760:10845-10864 Msa1453560:CDS 25.0%
! ATTGTTGTATTGGATGTTAA+AGG - tig0034760:10911-10930 Msa1453560:CDS 25.0%
! ATGTTAAAGGAGAAATCTTT+AGG - tig0034760:10924-10943 Msa1453560:CDS 25.0%
! ATAGAAGTTTATTCTCTAGA+AGG + tig0034760:11231-11250 Msa1453560:intergenic 25.0%
! ATAAACTTCTATATTCACAC+AGG - tig0034760:11239-11258 Msa1453560:intron 25.0%
! TACAAAAACTGAAAGAGAAA+CGG + tig0034760:11295-11314 Msa1453560:intergenic 25.0%
!!! AATGTAAACTAGTTTTAACG+TGG - tig0034760:11436-11455 Msa1453560:intron 25.0%
! CAGGAAGAAAAAGAAATATA+TGG + tig0034760:11671-11690 Msa1453560:intergenic 25.0%
!!! CTTTATGTCACACTTTTTTA+AGG + tig0034760:11716-11735 Msa1453560:intergenic 25.0%
!!! ACTTTTAGTTGTATGGTAAA+AGG - tig0034760:11839-11858 Msa1453560:CDS 25.0%
! TCGCTTTCATACTATATTAA+CGG - tig0034760:11880-11899 Msa1453560:CDS 25.0%
!! ATTAACGGATAAAATTTGTG+GGG - tig0034760:11895-11914 Msa1453560:CDS 25.0%
! AAAAGAGGTTAAACTATTTG+TGG + tig0034760:12040-12059 Msa1453560:intergenic 25.0%
! CACATTAATTGACATTTCAT+AGG - tig0034760:12146-12165 Msa1453560:CDS 25.0%
! TTAATGAAAAAACAGTTGAG+TGG - tig0034760:12720-12739 Msa1453560:intron 25.0%
! GTTTAAATATATGAATGAGG+AGG - tig0034760:12921-12940 Msa1453560:intron 25.0%
!! AATTGTTGTTGTGCTGTTTA+GGG + tig0034760:1819-1838 None:intergenic 30.0%
!! AAATTGTTGTTGTGCTGTTT+AGG + tig0034760:1820-1839 None:intergenic 30.0%
TAGTACGGTTGAAAATTCTA+GGG - tig0034760:1972-1991 Msa1453560:three_prime_UTR 30.0%
TGCATTGAAAAAAACGAACA+AGG + tig0034760:2126-2145 Msa1453560:intergenic 30.0%
!! ATATGACCTTCCATTTTTGT+AGG - tig0034760:2469-2488 Msa1453560:CDS 30.0%
! CGTGAATTTTCCTACAAAAA+TGG + tig0034760:2482-2501 Msa1453560:intergenic 30.0%
! GTTGTATATGATTTGGAAAC+CGG - tig0034760:2536-2555 Msa1453560:CDS 30.0%
! TCAGATTTTGTTGAAAGTCT+TGG - tig0034760:2663-2682 Msa1453560:intron 30.0%
ATTTGTTCATGAACAAGCAT+TGG + tig0034760:2779-2798 Msa1453560:intergenic 30.0%
ATGAACAAATTATTCCGAGA+AGG - tig0034760:2789-2808 Msa1453560:intron 30.0%
AAAACACTGGAGTTAGATAA+TGG - tig0034760:2930-2949 Msa1453560:intron 30.0%
AGGAATATTGTATGGAGAAA+AGG + tig0034760:3135-3154 Msa1453560:intergenic 30.0%
AGTAAATGAGTCAGATATTC+CGG + tig0034760:3204-3223 Msa1453560:intergenic 30.0%
TGTATAAATAAAGGGGAAAG+TGG + tig0034760:3343-3362 Msa1453560:intergenic 30.0%
TGTCAGTAACTTTGCATTAT+TGG + tig0034760:3512-3531 Msa1453560:intergenic 30.0%
ATAGAAGAGAATCGAAATTG+TGG + tig0034760:3593-3612 Msa1453560:intergenic 30.0%
CATTTCGACATAAATTACCA+TGG + tig0034760:3724-3743 Msa1453560:intergenic 30.0%
! CTCATAAAAATCTTCCGTTT+TGG + tig0034760:3898-3917 Msa1453560:intergenic 30.0%
AGTTGAAAATTAAGTACGTC+AGG + tig0034760:4071-4090 Msa1453560:intergenic 30.0%
ATGCTTATCATACGAAAGAA+AGG - tig0034760:4251-4270 Msa1453560:intron 30.0%
GTCCCATATTAAATGAGATA+TGG - tig0034760:4660-4679 Msa1453560:intron 30.0%
! TAAATGAGATATGGCTTGTA+AGG - tig0034760:4669-4688 Msa1453560:intron 30.0%
!!! GTGTACTCGTTTTTAGAATT+TGG + tig0034760:4711-4730 Msa1453560:intergenic 30.0%
!! CTGTTTTCTTGTTCGTTTTT+AGG - tig0034760:4924-4943 Msa1453560:intron 30.0%
! TAAAAAACAGAGAAAAGCAC+GGG + tig0034760:5009-5028 Msa1453560:intergenic 30.0%
TTCAGTTTGCAAAACCTTTA+TGG - tig0034760:5113-5132 Msa1453560:CDS 30.0%
AAACTTATCAAGCACCATAA+AGG + tig0034760:5130-5149 Msa1453560:intergenic 30.0%
!!! ATAGTTACATGCTTTTTCTG+TGG - tig0034760:5240-5259 Msa1453560:CDS 30.0%
!!! TAGTTACATGCTTTTTCTGT+GGG - tig0034760:5241-5260 Msa1453560:CDS 30.0%
CTGTAATGTTCCAAAATAGA+GGG + tig0034760:5340-5359 Msa1453560:intergenic 30.0%
ATGGATGATATTAAGAGTCA+TGG + tig0034760:5444-5463 Msa1453560:intergenic 30.0%
TGACTCTTAATATCATCCAT+AGG - tig0034760:5444-5463 Msa1453560:intron 30.0%
!! AAGTCACAAAGTTGATAGTA+GGG + tig0034760:5481-5500 Msa1453560:intergenic 30.0%
!! AAAGTCACAAAGTTGATAGT+AGG + tig0034760:5482-5501 Msa1453560:intergenic 30.0%
TAGTTGGGTGTTTAAAAAGT+TGG - tig0034760:5602-5621 Msa1453560:CDS 30.0%
TTCAATGTAACTGAATCTCT+TGG + tig0034760:5700-5719 Msa1453560:intergenic 30.0%
!! ACTTGACTTGTTGTTGTTTA+AGG - tig0034760:5784-5803 Msa1453560:intron 30.0%
TGATGAGCATGTTACTAATT+TGG - tig0034760:6101-6120 Msa1453560:intron 30.0%
GATGAGCATGTTACTAATTT+GGG - tig0034760:6102-6121 Msa1453560:intron 30.0%
! ATAGCTGAAAGTAATGGAAA+CGG - tig0034760:6213-6232 Msa1453560:intron 30.0%
TATAAGCGAAGATTGTGAAT+GGG + tig0034760:6250-6269 Msa1453560:intergenic 30.0%
TACCATCTTAGACATACAAA+AGG - tig0034760:6306-6325 Msa1453560:intron 30.0%
! TACCTTTTGTATGTCTAAGA+TGG + tig0034760:6311-6330 Msa1453560:intergenic 30.0%
! AAAGGTATAAAGGAAAATGG+GGG - tig0034760:6324-6343 Msa1453560:intron 30.0%
! AAACACCCTCTATTTCTTTA+TGG + tig0034760:6368-6387 Msa1453560:intergenic 30.0%
ATCTCATCATAAAGATGAGA+AGG + tig0034760:6420-6439 Msa1453560:intergenic 30.0%
CTTGTCAACAATATAGTCAT+AGG - tig0034760:6469-6488 Msa1453560:CDS 30.0%
AATTGAGTCGTATTACTGAT+AGG - tig0034760:6502-6521 Msa1453560:CDS 30.0%
!! TTTATTGGATTTCTAGTGAC+TGG - tig0034760:6583-6602 Msa1453560:CDS 30.0%
ACAAAAATATGCACTAACGT+TGG + tig0034760:6636-6655 Msa1453560:intergenic 30.0%
AACACACCTTACACAAATAA+TGG + tig0034760:6708-6727 Msa1453560:intergenic 30.0%
CAAACAAACAAAAGTTACCT+TGG + tig0034760:6876-6895 Msa1453560:intergenic 30.0%
CATGTCATATATACTGTTTG+CGG - tig0034760:6936-6955 Msa1453560:CDS 30.0%
TGTTAAGTAAAGTTAGTGCT+AGG - tig0034760:6988-7007 Msa1453560:CDS 30.0%
GTAAGAAAATTGGAGTCATA+TGG - tig0034760:7176-7195 Msa1453560:intron 30.0%
! ACTTGTGTTTGTGAAGTATT+TGG - tig0034760:7216-7235 Msa1453560:intron 30.0%
ATAGAGAAACAACAATTTGG+AGG + tig0034760:7390-7409 Msa1453560:intergenic 30.0%
! TGGATATTGTGTTGACAAAA+TGG + tig0034760:7429-7448 Msa1453560:intergenic 30.0%
! CCAATAAAGTTAAAGTGTCA+TGG + tig0034760:7449-7468 Msa1453560:intergenic 30.0%
! CCATGACACTTTAACTTTAT+TGG - tig0034760:7446-7465 Msa1453560:intron 30.0%
TGACAACAAATCTTCTTTCA+TGG - tig0034760:7665-7684 Msa1453560:intron 30.0%
AAAGAGATTGAAGCAAATCA+GGG + tig0034760:7800-7819 Msa1453560:intergenic 30.0%
AAAAGAGATTGAAGCAAATC+AGG + tig0034760:7801-7820 Msa1453560:intergenic 30.0%
ATATACTCATCAGCTAAAAC+AGG + tig0034760:7862-7881 Msa1453560:intergenic 30.0%
AGCTAATATAGCACATATTC+AGG - tig0034760:8206-8225 Msa1453560:intron 30.0%
GAATCATGAGAAATTATTCC+AGG - tig0034760:8276-8295 Msa1453560:intron 30.0%
TGTGCATTGCAAATATTTCT+TGG - tig0034760:8318-8337 Msa1453560:CDS 30.0%
CATTTAGAAATCCATGAAGA+AGG + tig0034760:8346-8365 Msa1453560:intergenic 30.0%
CTTCTTCATGGATTTCTAAA+TGG - tig0034760:8344-8363 Msa1453560:CDS 30.0%
TTATCTAGATTCTTGAATGG+TGG + tig0034760:8385-8404 Msa1453560:intergenic 30.0%
GGTTTATCTAGATTCTTGAA+TGG + tig0034760:8388-8407 Msa1453560:intergenic 30.0%
GATAAACCTGAAACTTTAGA+TGG - tig0034760:8400-8419 Msa1453560:CDS 30.0%
TAAACCTGAAACTTTAGATG+GGG - tig0034760:8402-8421 Msa1453560:CDS 30.0%
! TTAGAGAAGGTATATCAAGA+AGG - tig0034760:8587-8606 Msa1453560:CDS 30.0%
! TAGAGAAGGTATATCAAGAA+GGG - tig0034760:8588-8607 Msa1453560:CDS 30.0%
TAAAAAATAATCCGGAATCG+TGG - tig0034760:8718-8737 Msa1453560:CDS 30.0%
! TGTATGAATTTTCCAATGCA+GGG + tig0034760:9065-9084 Msa1453560:intergenic 30.0%
!!! CGTATTTGGTAGTTTTGAAT+AGG + tig0034760:9097-9116 Msa1453560:intergenic 30.0%
! CTTATGTTGAATTTTGTGTG+TGG - tig0034760:9224-9243 Msa1453560:intron 30.0%
GAATCTTCGGTAAGTTAATT+AGG - tig0034760:9316-9335 Msa1453560:intron 30.0%
TCACATGTCAATTTCTTGAT+AGG - tig0034760:9393-9412 Msa1453560:intron 30.0%
CACATGTCAATTTCTTGATA+GGG - tig0034760:9394-9413 Msa1453560:intron 30.0%
AAACAAAGTGAAAGAGCAAA+TGG + tig0034760:9493-9512 Msa1453560:intergenic 30.0%
TATGATCCACAAAAAACAGA+TGG + tig0034760:9590-9609 Msa1453560:intergenic 30.0%
!!! ATCTGTTTTTTGTGGATCAT+AGG - tig0034760:9589-9608 Msa1453560:intron 30.0%
AATTGTTGCTGATATTCCTT+TGG + tig0034760:9684-9703 Msa1453560:intergenic 30.0%
GATTCAGATAACTTATTGAC+TGG - tig0034760:9716-9735 Msa1453560:intron 30.0%
! GTCAGTAACATAACAGTTTT+TGG + tig0034760:9850-9869 Msa1453560:intergenic 30.0%
!!! GGTTTTGAAATCCATATCAT+TGG - tig0034760:9914-9933 Msa1453560:intron 30.0%
AACAAAAAAATTCTCAGACG+GGG + tig0034760:9961-9980 Msa1453560:intergenic 30.0%
GAACAAAAAAATTCTCAGAC+GGG + tig0034760:9962-9981 Msa1453560:intergenic 30.0%
ATATGTGTAATTCTTGTACG+TGG - tig0034760:10323-10342 Msa1453560:intron 30.0%
ATGTTGTATGCATATGCTTT+AGG - tig0034760:10528-10547 Msa1453560:intron 30.0%
AAGCATATTATTGCACACTT+TGG - tig0034760:10623-10642 Msa1453560:intron 30.0%
! CAATCATAAGACTTCAAGTT+TGG + tig0034760:10714-10733 Msa1453560:intergenic 30.0%
TATGATTGAAGTTTCAGTTC+AGG - tig0034760:10726-10745 Msa1453560:intron 30.0%
GTTAGTATCAAGTTTCTGTT+GGG - tig0034760:10748-10767 Msa1453560:intron 30.0%
! GATCTTTTGATAGGAGAAAT+TGG - tig0034760:10854-10873 Msa1453560:CDS 30.0%
TTTGATAGGAGAAATTGGAT+TGG - tig0034760:10859-10878 Msa1453560:CDS 30.0%
TTAAAGGAGAAATCTTTAGG+AGG - tig0034760:10927-10946 Msa1453560:CDS 30.0%
!! AGAAATCTTTAGGAGGTATT+AGG - tig0034760:10934-10953 Msa1453560:CDS 30.0%
!! TTTAGGAGGTATTAGGAATA+AGG - tig0034760:10941-10960 Msa1453560:CDS 30.0%
! AGAGAAAAAACTGACTTCAA+AGG - tig0034760:11466-11485 Msa1453560:intron 30.0%
!!! AGGTTTTGTTGATTAACGTT+AGG - tig0034760:11486-11505 Msa1453560:intron 30.0%
!!! GGTTTTGTTGATTAACGTTA+GGG - tig0034760:11487-11506 Msa1453560:intron 30.0%
TTGATTAACGTTAGGGATAA+TGG - tig0034760:11494-11513 Msa1453560:intron 30.0%
ACTATCTCATGCATATAACA+TGG - tig0034760:11621-11640 Msa1453560:intron 30.0%
! AAAAAAGTGTGACATAAAGC+AGG - tig0034760:11717-11736 Msa1453560:intron 30.0%
! AAGGATGTTCTTATTTAAGG+AGG - tig0034760:11771-11790 Msa1453560:intron 30.0%
! GGATGCGGATTAATATTTAT+AGG - tig0034760:11804-11823 Msa1453560:intron 30.0%
!! CGATTTCACTTTTAGTTGTA+TGG - tig0034760:11832-11851 Msa1453560:CDS 30.0%
TTTAGTTGTATGGTAAAAGG+TGG - tig0034760:11842-11861 Msa1453560:CDS 30.0%
GACGTTACTTCAAAGTTAAA+TGG + tig0034760:11964-11983 Msa1453560:intergenic 30.0%
!! TGAAGAAGTGCTAAATTGAA+TGG + tig0034760:12000-12019 Msa1453560:intergenic 30.0%
TTCTTCAATGTACTTCAAGA+AGG - tig0034760:12013-12032 Msa1453560:CDS 30.0%
AAATTTCAATTTGTCATCCC+AGG - tig0034760:12285-12304 Msa1453560:CDS 30.0%
TTATCCTATCACCTTTATGT+AGG + tig0034760:12330-12349 Msa1453560:intergenic 30.0%
AGGTGATAGGATAATTGATA+TGG - tig0034760:12336-12355 Msa1453560:CDS 30.0%
AAATATATTTGCATCCGCAA+GGG + tig0034760:12377-12396 Msa1453560:intergenic 30.0%
!! AATTTGATAGTGTGCCAAAA+TGG - tig0034760:12461-12480 Msa1453560:intron 30.0%
!!! ATATCTGACATCTTTTTTGG+TGG - tig0034760:12686-12705 Msa1453560:intron 30.0%
TCCAAAATTTGCCTTTATCT+TGG + tig0034760:12833-12852 Msa1453560:intergenic 30.0%
! TTTTGCTACCTAGTTACTAA+TGG - tig0034760:12858-12877 Msa1453560:intron 30.0%
GAGAAAAAGTAGAATTGTTC+TGG - tig0034760:12965-12984 Msa1453560:intron 30.0%
! CTCGTTCATTAATTTTTCCC+CGG - tig0034760:1945-1964 Msa1453560:three_prime_UTR 35.0%
! TTTTCAACCGTACTAGATTC+CGG + tig0034760:1967-1986 Msa1453560:intergenic 35.0%
CTAGTACGGTTGAAAATTCT+AGG - tig0034760:1971-1990 Msa1453560:three_prime_UTR 35.0%
ATTGCACAGTAGGAAAATTG+AGG + tig0034760:2042-2061 Msa1453560:intergenic 35.0%
AATTCAGCTTAGTTAGGCTT+TGG + tig0034760:2070-2089 Msa1453560:intergenic 35.0%
!!! TTATTTTTACTCCGAGTCGT+CGG + tig0034760:2331-2350 Msa1453560:intergenic 35.0%
GTGTCTGTACTAATGAAACA+TGG - tig0034760:2374-2393 Msa1453560:intron 35.0%
TCTGTACTAATGAAACATGG+AGG - tig0034760:2377-2396 Msa1453560:intron 35.0%
TGTAGGAAAATTCACGAAAC+CGG - tig0034760:2486-2505 Msa1453560:CDS 35.0%
GGTTATCTTTCGTGTTTACA+CGG + tig0034760:2575-2594 Msa1453560:intergenic 35.0%
!! GATAACCCTAATTGCTTTTG+TGG - tig0034760:2588-2607 Msa1453560:CDS 35.0%
CCAATCCACAAAAGCAATTA+GGG + tig0034760:2596-2615 Msa1453560:intergenic 35.0%
ACCAATCCACAAAAGCAATT+AGG + tig0034760:2597-2616 Msa1453560:intergenic 35.0%
GAAGATCATTGTTTGGATCA+GGG + tig0034760:2689-2708 Msa1453560:intergenic 35.0%
GAATCACGAAGATCATTGTT+TGG + tig0034760:2696-2715 Msa1453560:intergenic 35.0%
!!! AGATGTTTTAAGGCAACAAC+CGG - tig0034760:2830-2849 Msa1453560:intron 35.0%
GCAGTTACAAGCTAGTAAAA+TGG - tig0034760:2881-2900 Msa1453560:intron 35.0%
! AACTCCAGTGTTTTCACAAA+GGG + tig0034760:2924-2943 Msa1453560:intergenic 35.0%
! TAACTCCAGTGTTTTCACAA+AGG + tig0034760:2925-2944 Msa1453560:intergenic 35.0%
GAAGCAATGTCAAGAATTCA+TGG + tig0034760:2971-2990 Msa1453560:intergenic 35.0%
ATGTGACAACGTATGAATCA+TGG - tig0034760:3078-3097 Msa1453560:intron 35.0%
!! GGAGAAAAGGAGTGTTTATT+AGG + tig0034760:3122-3141 Msa1453560:intergenic 35.0%
GTAAATGAGTCAGATATTCC+GGG + tig0034760:3203-3222 Msa1453560:intergenic 35.0%
AATAAGTGTGAAATGAGCCA+AGG - tig0034760:3371-3390 Msa1453560:intron 35.0%
ATAAGTGTGAAATGAGCCAA+GGG - tig0034760:3372-3391 Msa1453560:intron 35.0%
TGGGTATAGTAGTAGTAAGA+GGG + tig0034760:3453-3472 Msa1453560:intergenic 35.0%
TACTCGTGCACATTTAACAA+CGG + tig0034760:3542-3561 Msa1453560:intergenic 35.0%
TGAGTTAGAGTTGAATGTGA+AGG - tig0034760:3914-3933 Msa1453560:intron 35.0%
GAGTTAGAGTTGAATGTGAA+GGG - tig0034760:3915-3934 Msa1453560:intron 35.0%
GTCCTATATTGGATGAGATA+TGG - tig0034760:4463-4482 Msa1453560:CDS 35.0%
!! CCTTACTAAACTGACTTGTA+AGG + tig0034760:4527-4546 Msa1453560:intergenic 35.0%
CCTTACAAGTCAGTTTAGTA+AGG - tig0034760:4524-4543 Msa1453560:CDS 35.0%
CAGTTTAGTAAGGTTGAGTT+AGG - tig0034760:4534-4553 Msa1453560:CDS 35.0%
TGCCATCTTAGAATTGAGTT+GGG + tig0034760:4560-4579 Msa1453560:intergenic 35.0%
TTGCCATCTTAGAATTGAGT+TGG + tig0034760:4561-4580 Msa1453560:intergenic 35.0%
!! TTGAAAGTGCACTTTTAGAG+AGG + tig0034760:4761-4780 Msa1453560:intergenic 35.0%
!! ATGATTTAAGGTTTTTCGGC+AGG + tig0034760:4800-4819 Msa1453560:intergenic 35.0%
AGAAAACAGAACAAGGTTGT+TGG + tig0034760:4913-4932 Msa1453560:intergenic 35.0%
ACGAACAAGAAAACAGAACA+AGG + tig0034760:4920-4939 Msa1453560:intergenic 35.0%
GTGCAATTTAAGCATCTCTT+GGG + tig0034760:5291-5310 Msa1453560:intergenic 35.0%
TGTGCAATTTAAGCATCTCT+TGG + tig0034760:5292-5311 Msa1453560:intergenic 35.0%
! GGTTGATGTGCAATTTAAGA+GGG + tig0034760:5319-5338 Msa1453560:intergenic 35.0%
GCTGTAATGTTCCAAAATAG+AGG + tig0034760:5341-5360 Msa1453560:intergenic 35.0%
GAATTAGACCAAGTATGATG+CGG + tig0034760:5386-5405 Msa1453560:intergenic 35.0%
TAGGGATTCAAAACTACCTA+TGG + tig0034760:5463-5482 Msa1453560:intergenic 35.0%
CATTTGGACACTCTTAATAC+TGG + tig0034760:5543-5562 Msa1453560:intergenic 35.0%
!! ATAGTCCCAAAGTTGATAGT+TGG - tig0034760:5586-5605 Msa1453560:intron 35.0%
!! TAGTCCCAAAGTTGATAGTT+GGG - tig0034760:5587-5606 Msa1453560:intron 35.0%
AACACCCAACTATCAACTTT+GGG + tig0034760:5594-5613 Msa1453560:intergenic 35.0%
AAACACCCAACTATCAACTT+TGG + tig0034760:5595-5614 Msa1453560:intergenic 35.0%
GTGTTTAAAAAGTTGGCCAT+TGG - tig0034760:5609-5628 Msa1453560:CDS 35.0%
ACAACTCTTAATGTCACCAA+TGG + tig0034760:5628-5647 Msa1453560:intergenic 35.0%
TGGTGACATTAAGAGTTGTA+TGG - tig0034760:5629-5648 Msa1453560:CDS 35.0%
AATTATGAACAAGCTTCCCT+AGG + tig0034760:5667-5686 Msa1453560:intergenic 35.0%
AAATGTTCATCTCTCAAGAG+AGG - tig0034760:5736-5755 Msa1453560:intron 35.0%
AATGTTCATCTCTCAAGAGA+GGG - tig0034760:5737-5756 Msa1453560:intron 35.0%
!! GACTTGTTGTTGTTTAAGGA+TGG - tig0034760:5788-5807 Msa1453560:intron 35.0%
!!! CGGTGTAAATTTTGATTTCC+TGG - tig0034760:5822-5841 Msa1453560:intron 35.0%
AGTAGTCTGCAAACACAAAT+AGG + tig0034760:5887-5906 Msa1453560:intergenic 35.0%
AAATCAAACTGAGACAACTC+AGG + tig0034760:5973-5992 Msa1453560:intergenic 35.0%
TGAGTTGTCTCAGTTTGATT+TGG - tig0034760:5972-5991 Msa1453560:intron 35.0%
TCACATCAAGGACAAAAACA+CGG - tig0034760:6059-6078 Msa1453560:intron 35.0%
AATTTGGGTAACCATCCATT+TGG - tig0034760:6117-6136 Msa1453560:intron 35.0%
CTATAAGCGAAGATTGTGAA+TGG + tig0034760:6251-6270 Msa1453560:intergenic 35.0%
TGCTAGCCATAAAGAAATAG+AGG - tig0034760:6359-6378 Msa1453560:intron 35.0%
GCTAGCCATAAAGAAATAGA+GGG - tig0034760:6360-6379 Msa1453560:intron 35.0%
TTGACAAGCATCAAGATATG+AGG + tig0034760:6457-6476 Msa1453560:intergenic 35.0%
GTGTGTCCATTATTTGTGTA+AGG - tig0034760:6699-6718 Msa1453560:intron 35.0%
!! TTAAGGGAACCTTTGAAACT+GGG + tig0034760:6814-6833 Msa1453560:intergenic 35.0%
!! ATTAAGGGAACCTTTGAAAC+TGG + tig0034760:6815-6834 Msa1453560:intergenic 35.0%
! ACAGACAGTCGCTTTATTAA+GGG + tig0034760:6830-6849 Msa1453560:intergenic 35.0%
TATACTGTTTGCGGATTTCT+AGG - tig0034760:6945-6964 Msa1453560:CDS 35.0%
GAAAGATAAACACATTGCCA+TGG + tig0034760:7015-7034 Msa1453560:intergenic 35.0%
TGAAGCAAAAGCTTATCAGA+TGG - tig0034760:7077-7096 Msa1453560:intron 35.0%
GTGATTGTCGGTAAGAAAAT+TGG - tig0034760:7166-7185 Msa1453560:intron 35.0%
AACACAAGTTCTCTTACATC+AGG + tig0034760:7205-7224 Msa1453560:intergenic 35.0%
!!! AGTGTTTTGTTTATGTGAGG+AGG - tig0034760:7244-7263 Msa1453560:intron 35.0%
CAGTATCTAACAAAAAGGAC+AGG - tig0034760:7295-7314 Msa1453560:CDS 35.0%
! TTGGGTTGCAAAATTCAGTA+TGG - tig0034760:7465-7484 Msa1453560:intron 35.0%
GTTGCAAAATTCAGTATGGT+GGG - tig0034760:7469-7488 Msa1453560:intron 35.0%
TATCTCATGATGACCATTGT+CGG - tig0034760:7502-7521 Msa1453560:intron 35.0%
AATCATTGAAGTCACTTGCA+CGG - tig0034760:7586-7605 Msa1453560:intron 35.0%
AGTATTTCATATCCAGACCA+TGG - tig0034760:7640-7659 Msa1453560:intron 35.0%
!! GAAGATTTGTTGTCATACCA+TGG + tig0034760:7660-7679 Msa1453560:intergenic 35.0%
CAGTAAATATCTTGACCGAT+TGG - tig0034760:7746-7765 Msa1453560:intron 35.0%
!!! ATTTTTTAAGGTTGCAGCAG+TGG - tig0034760:7880-7899 Msa1453560:intron 35.0%
! TGCTTATTCCTGAGACTTTT+TGG - tig0034760:8015-8034 Msa1453560:intron 35.0%
GTAAAACCTGATGATCCTAT+AGG - tig0034760:8065-8084 Msa1453560:CDS 35.0%
! ATTACCCCATCTAAAGTTTC+AGG + tig0034760:8409-8428 Msa1453560:intergenic 35.0%
AAATCATTGTGACTGCTCTT+TGG - tig0034760:8535-8554 Msa1453560:CDS 35.0%
TTACGTACAACTGTTAGAGA+AGG - tig0034760:8574-8593 Msa1453560:CDS 35.0%
! AGAGAAGGTATATCAAGAAG+GGG - tig0034760:8589-8608 Msa1453560:CDS 35.0%
TATATCAAGAAGGGGAGATA+GGG - tig0034760:8597-8616 Msa1453560:CDS 35.0%
TGGAAAAAAGGAAGAGTGAA+GGG + tig0034760:8811-8830 Msa1453560:intergenic 35.0%
! CTGTATGAATTTTCCAATGC+AGG + tig0034760:9066-9085 Msa1453560:intergenic 35.0%
AAACTACCAAATACGTGTGT+TGG - tig0034760:9102-9121 Msa1453560:intron 35.0%
TATAATCCAGCGAGAATCTT+CGG - tig0034760:9303-9322 Msa1453560:intron 35.0%
! CTTCCTTTTCACATGTTGAT+GGG - tig0034760:9520-9539 Msa1453560:intron 35.0%
CCAATCATTCTCAGATATGA+TGG + tig0034760:9627-9646 Msa1453560:intergenic 35.0%
CCATCATATCTGAGAATGAT+TGG - tig0034760:9624-9643 Msa1453560:intron 35.0%
GATATGCTTCTGTGAAGAAT+GGG - tig0034760:9646-9665 Msa1453560:intron 35.0%
ATATGCTTCTGTGAAGAATG+GGG - tig0034760:9647-9666 Msa1453560:intron 35.0%
!! AACAGTTTTTGGATTACCTC+AGG + tig0034760:9839-9858 Msa1453560:intergenic 35.0%
! ACAGTGCCAAAAAGTATGAT+GGG + tig0034760:9873-9892 Msa1453560:intergenic 35.0%
! TACAGTGCCAAAAAGTATGA+TGG + tig0034760:9874-9893 Msa1453560:intergenic 35.0%
AAACAGGGAAACCAATGATA+TGG + tig0034760:9928-9947 Msa1453560:intergenic 35.0%
ACAAAAAAATTCTCAGACGG+GGG + tig0034760:9960-9979 Msa1453560:intergenic 35.0%
! TGTAATGACACAAGTTGAGA+TGG + tig0034760:10114-10133 Msa1453560:intergenic 35.0%
TGTAATTCTTGTACGTGGTA+AGG - tig0034760:10328-10347 Msa1453560:intron 35.0%
!! GGAGGTACCTAAATCAATAT+TGG - tig0034760:10349-10368 Msa1453560:intron 35.0%
GGTACCTAAATCAATATTGG+AGG - tig0034760:10352-10371 Msa1453560:intron 35.0%
TGTTTCAACTAATCCCTTTG+AGG + tig0034760:10378-10397 Msa1453560:intergenic 35.0%
!! AGGGATTAGTTGAAACAGAT+CGG - tig0034760:10381-10400 Msa1453560:intron 35.0%
!!! AACTTCCATTTTTGGTCTTC+CGG + tig0034760:10424-10443 Msa1453560:intergenic 35.0%
GAAGACCAAAAATGGAAGTT+CGG - tig0034760:10424-10443 Msa1453560:intron 35.0%
! ACTAACCGAACTTCCATTTT+TGG + tig0034760:10432-10451 Msa1453560:intergenic 35.0%
ATAGAGTTTACTTACCCCAA+AGG + tig0034760:10510-10529 Msa1453560:intergenic 35.0%
GAACAAGCACTCATTGAAAA+TGG - tig0034760:10569-10588 Msa1453560:intron 35.0%
GGTTAGTATCAAGTTTCTGT+TGG - tig0034760:10747-10766 Msa1453560:intron 35.0%
GACGCATTTGATTGTTGTAT+TGG - tig0034760:10901-10920 Msa1453560:CDS 35.0%
GATAACTCTAATCTGAGTGA+AGG + tig0034760:11063-11082 Msa1453560:intergenic 35.0%
! TTGTAACTTTTAGTGTCAGC+CGG - tig0034760:11114-11133 Msa1453560:intron 35.0%
CACTTTGACATCAGTTAGTT+AGG + tig0034760:11161-11180 Msa1453560:intergenic 35.0%
CTAACTAACTGATGTCAAAG+TGG - tig0034760:11159-11178 Msa1453560:intron 35.0%
AACTTCTATATTCACACAGG+AGG - tig0034760:11242-11261 Msa1453560:intron 35.0%
ACTTCTATATTCACACAGGA+GGG - tig0034760:11243-11262 Msa1453560:intron 35.0%
CAATCTAACACTTTCAGCTA+TGG - tig0034760:11356-11375 Msa1453560:intron 35.0%
CATGCATATAACATGGTTTG+TGG - tig0034760:11628-11647 Msa1453560:intron 35.0%
!!! TTTTAAGGTGACATTGAGAC+AGG + tig0034760:11701-11720 Msa1453560:intergenic 35.0%
! TGTTCTTATTTAAGGAGGTG+AGG - tig0034760:11776-11795 Msa1453560:intron 35.0%
ATTTAAGGAGGTGAGGAATT+AGG - tig0034760:11783-11802 Msa1453560:intron 35.0%
! GCTAACCGATTTCATAAAAG+AGG + tig0034760:12055-12074 Msa1453560:intergenic 35.0%
!! GTCAGGAAAGTATTATCTTC+AGG - tig0034760:12208-12227 Msa1453560:CDS 35.0%
GAAAACCAGATCCTACATAA+AGG - tig0034760:12316-12335 Msa1453560:CDS 35.0%
TATCACCTTTATGTAGGATC+TGG + tig0034760:12324-12343 Msa1453560:intergenic 35.0%
AGATCCTACATAAAGGTGAT+AGG - tig0034760:12323-12342 Msa1453560:CDS 35.0%
CAAATATATTTGCATCCGCA+AGG + tig0034760:12378-12397 Msa1453560:intergenic 35.0%
GGATGCAAATATATTTGCCA+GGG - tig0034760:12381-12400 Msa1453560:CDS 35.0%
CCATGAAAATCGAGATATTG+CGG - tig0034760:12432-12451 Msa1453560:intron 35.0%
CATGAAAATCGAGATATTGC+GGG - tig0034760:12433-12452 Msa1453560:intron 35.0%
! AAGATTGTGCATCACCATTT+TGG + tig0034760:12478-12497 Msa1453560:intergenic 35.0%
TGTAATGTATCTACTTAGGG+AGG + tig0034760:12507-12526 Msa1453560:intergenic 35.0%
GCGTGTAATGTATCTACTTA+GGG + tig0034760:12510-12529 Msa1453560:intergenic 35.0%
TGCGTGTAATGTATCTACTT+AGG + tig0034760:12511-12530 Msa1453560:intergenic 35.0%
!! ACCAGGCATATTGATTTACA+TGG + tig0034760:12773-12792 Msa1453560:intergenic 35.0%
! TTTGCCTTTATCTTGGCTTT+AGG + tig0034760:12826-12845 Msa1453560:intergenic 35.0%
! GCCAAGATAAAGGCAAATTT+TGG - tig0034760:12829-12848 Msa1453560:intron 35.0%
TACTAATGGAACACGCATTT+AGG - tig0034760:12872-12891 Msa1453560:intron 35.0%
!! ATTGTTCTGGAGTACTATGA+AGG - tig0034760:12978-12997 Msa1453560:intron 35.0%
!! TTGTTCTGGAGTACTATGAA+GGG - tig0034760:12979-12998 Msa1453560:intron 35.0%
AATAGCTACAGTGTAAACTC+TGG - tig0034760:13079-13098 Msa1453560:five_prime_UTR 35.0%
TAAGCTAACTTATTGTCACC+AGG - tig0034760:13120-13139 Msa1453560:five_prime_UTR 35.0%
!! GTTTGTTTGTTTTCAGCTGC+AGG + tig0034760:1782-1801 None:intergenic 40.0%
! CTGTTTAGGGTGGAAATTGA+AGG + tig0034760:1806-1825 None:intergenic 40.0%
! TTTTTCCCCGGAATCTAGTA+CGG - tig0034760:1957-1976 Msa1453560:three_prime_UTR 40.0%
TTTCAACCGTACTAGATTCC+GGG + tig0034760:1966-1985 Msa1453560:intergenic 40.0%
TTTGGAGATGATTGCACAGT+AGG + tig0034760:2052-2071 Msa1453560:intergenic 40.0%
GTTATGATATTGTAGGGGCT+CGG - tig0034760:2278-2297 Msa1453560:CDS 40.0%
ATCATCTTCAGTAACCACAC+CGG + tig0034760:2508-2527 Msa1453560:intergenic 40.0%
!! ATTTGGAAACCGGTTTGTTC+AGG - tig0034760:2546-2565 Msa1453560:CDS 40.0%
!! CCCTAATTGCTTTTGTGGAT+TGG - tig0034760:2593-2612 Msa1453560:intron 40.0%
CGAAGATCATTGTTTGGATC+AGG + tig0034760:2690-2709 Msa1453560:intergenic 40.0%
CTGCAGGTCTAACAAATCTT+GGG - tig0034760:2727-2746 Msa1453560:intron 40.0%
TGCAGGTCTAACAAATCTTG+GGG - tig0034760:2728-2747 Msa1453560:intron 40.0%
!! CAAGCATTGGAGTATTCCAT+TGG + tig0034760:2766-2785 Msa1453560:intergenic 40.0%
!! CCTTAAAACATCTGGTTCTG+CGG + tig0034760:2823-2842 Msa1453560:intergenic 40.0%
GGTTGTTGCCTTAAAACATC+TGG + tig0034760:2831-2850 Msa1453560:intergenic 40.0%
TTCTCCCTTTGTGAAAACAC+TGG - tig0034760:2917-2936 Msa1453560:intron 40.0%
!! GTTAGATAATGGAGTTCAGC+AGG - tig0034760:2941-2960 Msa1453560:intron 40.0%
!! GAGTCATTCTAAAGTTCCCA+AGG - tig0034760:3013-3032 Msa1453560:intron 40.0%
TGAACTACTGTTCTTGCCTT+GGG + tig0034760:3032-3051 Msa1453560:intergenic 40.0%
TTGAACTACTGTTCTTGCCT+TGG + tig0034760:3033-3052 Msa1453560:intergenic 40.0%
! GTAGTTCAAGATCTTTTCCG+CGG - tig0034760:3044-3063 Msa1453560:intron 40.0%
TAAGTGTGAAATGAGCCAAG+GGG - tig0034760:3373-3392 Msa1453560:intron 40.0%
AGCCAAGGGGTCAATTAATT+CGG - tig0034760:3386-3405 Msa1453560:intron 40.0%
GGGTATAGTAGTAGTAAGAG+GGG + tig0034760:3452-3471 Msa1453560:intergenic 40.0%
GTGGGTATAGTAGTAGTAAG+AGG + tig0034760:3454-3473 Msa1453560:intergenic 40.0%
!! CTCTGAAGCTTCTTCCAAAA+CGG - tig0034760:3881-3900 Msa1453560:intron 40.0%
ACGTTGTGTCTTTCTTCCAA+AGG - tig0034760:4094-4113 Msa1453560:intron 40.0%
GAAGTTCATCGGAATACCTT+TGG + tig0034760:4113-4132 Msa1453560:intergenic 40.0%
GGCCATATCTCATCCAATAT+AGG + tig0034760:4468-4487 Msa1453560:intergenic 40.0%
!! CTAAACTGACTTGTAAGGTG+AGG + tig0034760:4522-4541 Msa1453560:intergenic 40.0%
AGAGTCTATCCAAGATCCAT+TGG - tig0034760:4582-4601 Msa1453560:CDS 40.0%
! ATGGCTTGTAAGGTTGAGTT+AGG - tig0034760:4679-4698 Msa1453560:intron 40.0%
!! CACTTTTAGAGAGGAAATCC+AGG + tig0034760:4752-4771 Msa1453560:intergenic 40.0%
AATGACGAGAGACACACTTA+AGG + tig0034760:4840-4859 Msa1453560:intergenic 40.0%
TTTAAGCATCTCTTGGGCAA+GGG + tig0034760:5285-5304 Msa1453560:intergenic 40.0%
ATTTAAGCATCTCTTGGGCA+AGG + tig0034760:5286-5305 Msa1453560:intergenic 40.0%
!! GGGTTGATGTGCAATTTAAG+AGG + tig0034760:5299-5318 Msa1453560:intergenic 40.0%
! TGCACATCAACCCTCTATTT+TGG - tig0034760:5327-5346 Msa1453560:intron 40.0%
AATTAGTGCCGCATCATACT+TGG - tig0034760:5375-5394 Msa1453560:intron 40.0%
TATGGCGAGAAAAAAAGCCT+AGG - tig0034760:5647-5666 Msa1453560:intron 40.0%
ATGGCGAGAAAAAAAGCCTA+GGG - tig0034760:5648-5667 Msa1453560:intron 40.0%
ATGTTCATCTCTCAAGAGAG+GGG - tig0034760:5738-5757 Msa1453560:intron 40.0%
GCTTATAAGAATGCAACGAG+TGG + tig0034760:5849-5868 Msa1453560:intergenic 40.0%
TTCCTGCACAACTTGATATG+CGG - tig0034760:5938-5957 Msa1453560:intron 40.0%
!! TCAGCTGTACTGATTCACAA+GGG - tig0034760:6006-6025 Msa1453560:intron 40.0%
GTAATGGCCACTATTAACAC+CGG + tig0034760:6034-6053 Msa1453560:intergenic 40.0%
CCTTGATGTGAGCAATGTAA+TGG + tig0034760:6050-6069 Msa1453560:intergenic 40.0%
CCATTACATTGCTCACATCA+AGG - tig0034760:6047-6066 Msa1453560:intron 40.0%
CACATCAAGGACAAAAACAC+GGG - tig0034760:6060-6079 Msa1453560:intron 40.0%
ACATCAAGGACAAAAACACG+GGG - tig0034760:6061-6080 Msa1453560:intron 40.0%
GTGAATTGCATCAGTTGCAA+TGG + tig0034760:6172-6191 Msa1453560:intergenic 40.0%
GCAAGGATAGCTGAAAGTAA+TGG - tig0034760:6207-6226 Msa1453560:intron 40.0%
CAATAAAATGGTCGCTCCAA+TGG + tig0034760:6570-6589 Msa1453560:intergenic 40.0%
! CATTGGAGCGACCATTTTAT+TGG - tig0034760:6568-6587 Msa1453560:CDS 40.0%
CATCCATCCAATGTTCACAT+GGG - tig0034760:6783-6802 Msa1453560:CDS 40.0%
TTTCCCATGTGAACATTGGA+TGG + tig0034760:6789-6808 Msa1453560:intergenic 40.0%
! GACAGACAGTCGCTTTATTA+AGG + tig0034760:6831-6850 Msa1453560:intergenic 40.0%
TAAAGTTAGTGCTAGGTCCA+TGG - tig0034760:6995-7014 Msa1453560:CDS 40.0%
! AAATACTGCCTGTTTCTTCG+TGG - tig0034760:7144-7163 Msa1453560:intron 40.0%
TGTTTCTTCGTGGTGATTGT+CGG - tig0034760:7154-7173 Msa1453560:intron 40.0%
GGTTGCAAAATTCAGTATGG+TGG - tig0034760:7468-7487 Msa1453560:intron 40.0%
TGGTCATCATGAGATAGTGT+TGG + tig0034760:7498-7517 Msa1453560:intergenic 40.0%
ATCTCATGATGACCATTGTC+GGG - tig0034760:7503-7522 Msa1453560:intron 40.0%
ATATCAGACAATCCCGACAA+TGG + tig0034760:7518-7537 Msa1453560:intergenic 40.0%
TCTTCTACCACGATAGGTAT+CGG + tig0034760:7565-7584 Msa1453560:intergenic 40.0%
TGATTCTCTTCTACCACGAT+AGG + tig0034760:7571-7590 Msa1453560:intergenic 40.0%
ATCATTGAAGTCACTTGCAC+GGG - tig0034760:7587-7606 Msa1453560:intron 40.0%
TTGCACGGGATATTCTTGAT+GGG - tig0034760:7601-7620 Msa1453560:intron 40.0%
! TTTGTTGTCATACCATGGTC+TGG + tig0034760:7655-7674 Msa1453560:intergenic 40.0%
!!! CTTTTTTCGTTCCCTATCAG+TGG + tig0034760:7702-7721 Msa1453560:intergenic 40.0%
AAGAAGAGCCAAAAAGTCTC+AGG + tig0034760:8026-8045 Msa1453560:intergenic 40.0%
AAACCTGATGATCCTATAGG+CGG - tig0034760:8068-8087 Msa1453560:CDS 40.0%
AGTGCATTGAGAACACTCTA+GGG + tig0034760:8114-8133 Msa1453560:intergenic 40.0%
ATTATCTCAAGCAGCATGCT+TGG - tig0034760:8139-8158 Msa1453560:intron 40.0%
TATTTGCAATGCACAGAGAG+TGG + tig0034760:8313-8332 Msa1453560:intergenic 40.0%
!! ATTTCTTGGTGCCTTCTTCA+TGG - tig0034760:8332-8351 Msa1453560:CDS 40.0%
TGATTCGCTGATGTGTGAAA+AGG - tig0034760:8429-8448 Msa1453560:CDS 40.0%
GTATATCAAGAAGGGGAGAT+AGG - tig0034760:8596-8615 Msa1453560:CDS 40.0%
! TTTTGATCCATAGTATGGGG+AGG - tig0034760:8642-8661 Msa1453560:CDS 40.0%
AATAATCCGGAATCGTGGAT+TGG - tig0034760:8723-8742 Msa1453560:CDS 40.0%
ATAATCCGGAATCGTGGATT+GGG - tig0034760:8724-8743 Msa1453560:CDS 40.0%
AAGAGTGAAGGGAAGAAGAT+AGG + tig0034760:8800-8819 Msa1453560:intergenic 40.0%
GTGGAAAAAAGGAAGAGTGA+AGG + tig0034760:8812-8831 Msa1453560:intergenic 40.0%
!! GACAACATTAGCCTTACACT+CGG + tig0034760:8911-8930 Msa1453560:intergenic 40.0%
! ATGAATTTTCCAATGCAGGG+AGG + tig0034760:9062-9081 Msa1453560:intergenic 40.0%
AAGTCACCAACACACGTATT+TGG + tig0034760:9111-9130 Msa1453560:intergenic 40.0%
TATTGAAAGACCTCCTCAAC+TGG - tig0034760:9264-9283 Msa1453560:intron 40.0%
!!! TCACCTGTTTTAGTACGCTT+TGG - tig0034760:9424-9443 Msa1453560:intron 40.0%
GATCCAAAGCGTACTAAAAC+AGG + tig0034760:9430-9449 Msa1453560:intergenic 40.0%
TCAACATGTGAAAAGGAAGG+AGG + tig0034760:9519-9538 Msa1453560:intergenic 40.0%
CCATCAACATGTGAAAAGGA+AGG + tig0034760:9522-9541 Msa1453560:intergenic 40.0%
! CCTTCCTTTTCACATGTTGA+TGG - tig0034760:9519-9538 Msa1453560:intron 40.0%
ACACCCATCAACATGTGAAA+AGG + tig0034760:9526-9545 Msa1453560:intergenic 40.0%
!! TTTTCACATGTTGATGGGTG+TGG - tig0034760:9525-9544 Msa1453560:intron 40.0%
!!! GTTTTTTGTGGATCATAGGC+AGG - tig0034760:9593-9612 Msa1453560:intron 40.0%
GGATATGCTTCTGTGAAGAA+TGG - tig0034760:9645-9664 Msa1453560:intron 40.0%
TTTGATCAAGACTTGTCCTG+AGG - tig0034760:9820-9839 Msa1453560:intron 40.0%
! ACTGACCCCATCATACTTTT+TGG - tig0034760:9864-9883 Msa1453560:intron 40.0%
! CAGTGCCAAAAAGTATGATG+GGG + tig0034760:9872-9891 Msa1453560:intergenic 40.0%
CAAAAAAATTCTCAGACGGG+GGG + tig0034760:9959-9978 Msa1453560:intergenic 40.0%
GACTGACAAGTTATTGATCG+CGG - tig0034760:10021-10040 Msa1453560:intron 40.0%
ACTGACAAGTTATTGATCGC+GGG - tig0034760:10022-10041 Msa1453560:intron 40.0%
!! GTTTCTGGTAAATTCAGCAC+TGG + tig0034760:10164-10183 Msa1453560:intergenic 40.0%
TTCATTACCTCTCAATGTCC+AGG - tig0034760:10229-10248 Msa1453560:intron 40.0%
CAATGCAACTTTCACAAACC+TGG + tig0034760:10250-10269 Msa1453560:intergenic 40.0%
CAGGTTTGTGAAAGTTGCAT+TGG - tig0034760:10248-10267 Msa1453560:intron 40.0%
AATTCTTGTACGTGGTAAGG+AGG - tig0034760:10331-10350 Msa1453560:intron 40.0%
!! GAGGCCTCCAATATTGATTT+AGG + tig0034760:10359-10378 Msa1453560:intergenic 40.0%
ATCAATATTGGAGGCCTCAA+AGG - tig0034760:10361-10380 Msa1453560:intron 40.0%
TCAATATTGGAGGCCTCAAA+GGG - tig0034760:10362-10381 Msa1453560:intron 40.0%
! GATTAGTTGAAACAGATCGG+CGG - tig0034760:10384-10403 Msa1453560:intron 40.0%
!!! ACTTCCATTTTTGGTCTTCC+GGG + tig0034760:10423-10442 Msa1453560:intergenic 40.0%
ACCAGCTGAAGATGATGATA+TGG - tig0034760:10480-10499 Msa1453560:intron 40.0%
CCAGCTGAAGATGATGATAT+GGG - tig0034760:10481-10500 Msa1453560:intron 40.0%
ATGATGATATGGGAGTCCTT+TGG - tig0034760:10491-10510 Msa1453560:intron 40.0%
TGATGATATGGGAGTCCTTT+GGG - tig0034760:10492-10511 Msa1453560:intron 40.0%
AGTTTGGTCACTTGGAACTT+AGG + tig0034760:10698-10717 Msa1453560:intergenic 40.0%
! AGACTTCAAGTTTGGTCACT+TGG + tig0034760:10706-10725 Msa1453560:intergenic 40.0%
TTCTGTTGGGTACATCTTCT+AGG - tig0034760:10761-10780 Msa1453560:intron 40.0%
!! AGGAGAAATTGGATTGGTGA+TGG - tig0034760:10865-10884 Msa1453560:CDS 40.0%
!! AAATTGGATTGGTGATGGTG+AGG - tig0034760:10870-10889 Msa1453560:CDS 40.0%
!! AATTGGATTGGTGATGGTGA+GGG - tig0034760:10871-10890 Msa1453560:CDS 40.0%
TCTGAGTGAAGGTTGACTAT+TGG + tig0034760:11052-11071 Msa1453560:intergenic 40.0%
! GAGTTAGTTTCAGTGAGTGT+AGG + tig0034760:11085-11104 Msa1453560:intergenic 40.0%
TCTAACACTTTCAGCTATGG+CGG - tig0034760:11359-11378 Msa1453560:intron 40.0%
CATTGAGACAGGTGTATTTC+AGG + tig0034760:11690-11709 Msa1453560:intergenic 40.0%
AATGGCACAAAATAGCGTGA+TGG + tig0034760:11946-11965 Msa1453560:intergenic 40.0%
TGAGAGAACATCAGTTAGCT+AGG - tig0034760:12099-12118 Msa1453560:CDS 40.0%
! TAGCTAGGTGTTATCTTGAC+AGG - tig0034760:12114-12133 Msa1453560:CDS 40.0%
CGGATGCAAATATATTTGCC+AGG - tig0034760:12380-12399 Msa1453560:CDS 40.0%
CAGGGATCAGATTATAGTGA+GGG - tig0034760:12399-12418 Msa1453560:CDS 40.0%
! CCGCAATATCTCGATTTTCA+TGG + tig0034760:12435-12454 Msa1453560:intergenic 40.0%
TACAGCAAACATTTCATCCC+AGG - tig0034760:12630-12649 Msa1453560:intron 40.0%
GCCATGTAAATCAATATGCC+TGG - tig0034760:12769-12788 Msa1453560:intron 40.0%
TCCTCCTAAAGCCAAGATAA+AGG - tig0034760:12819-12838 Msa1453560:intron 40.0%
TGCGTGTTCCATTAGTAACT+AGG + tig0034760:12869-12888 Msa1453560:intergenic 40.0%
CGCATTTAGGTGCACATATA+TGG - tig0034760:12885-12904 Msa1453560:intron 40.0%
!! TGTTGTTGTGCTGTTTAGGG+TGG + tig0034760:1816-1835 None:intergenic 45.0%
TTCAACCGTACTAGATTCCG+GGG + tig0034760:1965-1984 Msa1453560:intergenic 45.0%
AGACAAAAACAGGGCGATGA+TGG - tig0034760:2352-2371 Msa1453560:intron 45.0%
GAAAATTCACGAAACCGGTG+TGG - tig0034760:2491-2510 Msa1453560:CDS 45.0%
! ATCCAGGAAGTCTGGCTTAT+GGG - tig0034760:2632-2651 Msa1453560:intron 45.0%
!! CCAAGATTTGTTAGACCTGC+AGG + tig0034760:2729-2748 Msa1453560:intergenic 45.0%
CCTGCAGGTCTAACAAATCT+TGG - tig0034760:2726-2745 Msa1453560:intron 45.0%
CTGCGGAAAATATGCCTTCT+CGG + tig0034760:2806-2825 Msa1453560:intergenic 45.0%
! CCGCAGAACCAGATGTTTTA+AGG - tig0034760:2820-2839 Msa1453560:intron 45.0%
CGAGCTAGTTGATCTAACAC+CGG + tig0034760:2852-2871 Msa1453560:intergenic 45.0%
TCACATGAGATACACTTCCG+CGG + tig0034760:3064-3083 Msa1453560:intergenic 45.0%
ATGAGTCAGATATTCCGGGA+CGG + tig0034760:3199-3218 Msa1453560:intergenic 45.0%
GCCAAGGGGTCAATTAATTC+GGG - tig0034760:3387-3406 Msa1453560:intron 45.0%
TCCCGAATTAATTGACCCCT+TGG + tig0034760:3391-3410 Msa1453560:intergenic 45.0%
AGGGGTCAATTAATTCGGGA+CGG - tig0034760:3391-3410 Msa1453560:intron 45.0%
GTCAATTAATTCGGGACGGA+GGG - tig0034760:3395-3414 Msa1453560:intron 45.0%
! GTGCACGAGTATGTTTTCTC+AGG - tig0034760:3551-3570 Msa1453560:intron 45.0%
TGTCAGAACTCAAGCAACCA+TGG - tig0034760:3704-3723 Msa1453560:intron 45.0%
GTCACATACATAGACACTGC+TGG + tig0034760:3801-3820 Msa1453560:intergenic 45.0%
CTATGTAGGTGCTCACAATG+TGG - tig0034760:3852-3871 Msa1453560:intron 45.0%
CATGAAGCTCTTCAACAGCT+AGG + tig0034760:3974-3993 Msa1453560:intergenic 45.0%
CTAGCTGTTGAAGAGCTTCA+TGG - tig0034760:3972-3991 Msa1453560:intron 45.0%
! GGCCCAACTCAATTCTAAGA+TGG - tig0034760:4555-4574 Msa1453560:CDS 45.0%
! GGACATTTAGAGCGTGAACT+GGG + tig0034760:4612-4631 Msa1453560:intergenic 45.0%
! TGGACATTTAGAGCGTGAAC+TGG + tig0034760:4613-4632 Msa1453560:intergenic 45.0%
TGCAGCGTAGTGATCATGTA+TGG - tig0034760:5189-5208 Msa1453560:CDS 45.0%
TTAAGCATCTCTTGGGCAAG+GGG + tig0034760:5284-5303 Msa1453560:intergenic 45.0%
!! GTCAGCTGTACTGATTCACA+AGG - tig0034760:6005-6024 Msa1453560:intron 45.0%
!! GTACTGATTCACAAGGGAAC+CGG - tig0034760:6012-6031 Msa1453560:intron 45.0%
! AAGGGAACCGGTGTTAATAG+TGG - tig0034760:6024-6043 Msa1453560:intron 45.0%
AAGATCCTTCGCCAAATGGA+TGG + tig0034760:6131-6150 Msa1453560:intergenic 45.0%
CTAGAAGATCCTTCGCCAAA+TGG + tig0034760:6135-6154 Msa1453560:intergenic 45.0%
! TGCATCAGTTGCAATGGACT+TGG + tig0034760:6166-6185 Msa1453560:intergenic 45.0%
AAGATTGTGAATGGGTGGTG+TGG + tig0034760:6242-6261 Msa1453560:intergenic 45.0%
AAGCGAAGATTGTGAATGGG+TGG + tig0034760:6247-6266 Msa1453560:intergenic 45.0%
! GAAAATGGGGGCATAGTTTG+CGG - tig0034760:6336-6355 Msa1453560:intron 45.0%
TAAAATGGTCGCTCCAATGG+TGG + tig0034760:6567-6586 Msa1453560:intergenic 45.0%
GAATAATGTTGTCAGCCCAC+TGG + tig0034760:6614-6633 Msa1453560:intergenic 45.0%
GCATCCATCCAATGTTCACA+TGG - tig0034760:6782-6801 Msa1453560:CDS 45.0%
GGACTTTCCCATGTGAACAT+TGG + tig0034760:6793-6812 Msa1453560:intergenic 45.0%
TGGGAAAGTCCCAGTTTCAA+AGG - tig0034760:6802-6821 Msa1453560:CDS 45.0%
GACAATCACCACGAAGAAAC+AGG + tig0034760:7155-7174 Msa1453560:intergenic 45.0%
TGTCGGGATTGTCTGATATG+CGG - tig0034760:7519-7538 Msa1453560:intron 45.0%
CTTGCACGGGATATTCTTGA+TGG - tig0034760:7600-7619 Msa1453560:intron 45.0%
CTTGATGGGAACTGTCTAGA+TGG - tig0034760:7615-7634 Msa1453560:intron 45.0%
CCTACATGCTTCCACTGATA+GGG - tig0034760:7688-7707 Msa1453560:intron 45.0%
AGATTGAAGCAAATCAGGGC+AGG + tig0034760:7796-7815 Msa1453560:intergenic 45.0%
!!! TTTTAAGGTTGCAGCAGTGG+TGG - tig0034760:7883-7902 Msa1453560:intron 45.0%
GCAGCAATTAGTTGTCCACA+CGG - tig0034760:7954-7973 Msa1453560:intron 45.0%
! GAACACTCTAGGGAATCTGA+AGG + tig0034760:8104-8123 Msa1453560:intergenic 45.0%
CAGTGCATTGAGAACACTCT+AGG + tig0034760:8115-8134 Msa1453560:intergenic 45.0%
! AGAGTGGCATACTTTTAGCC+TGG + tig0034760:8297-8316 Msa1453560:intergenic 45.0%
CATATTGCCTCCCCATACTA+TGG + tig0034760:8652-8671 Msa1453560:intergenic 45.0%
GTATGGGGAGGCAATATGAT+AGG - tig0034760:8654-8673 Msa1453560:CDS 45.0%
TCTAACCCAATCCACGATTC+CGG + tig0034760:8732-8751 Msa1453560:intergenic 45.0%
!! CGGGTGCTATTGTGGAAAAA+AGG + tig0034760:8823-8842 Msa1453560:intergenic 45.0%
!! AACATTAGCCTTACACTCGG+TGG + tig0034760:8908-8927 Msa1453560:intergenic 45.0%
GTTATCCTGTCTCGTGTTTC+AGG + tig0034760:8962-8981 Msa1453560:intergenic 45.0%
CACGAGACAGGATAACATGT+CGG - tig0034760:8966-8985 Msa1453560:CDS 45.0%
ACGAGACAGGATAACATGTC+GGG - tig0034760:8967-8986 Msa1453560:CDS 45.0%
AACTTACCGAAGATTCTCGC+TGG + tig0034760:9312-9331 Msa1453560:intergenic 45.0%
! TTTTGTGGATCATAGGCAGG+TGG - tig0034760:9596-9615 Msa1453560:intron 45.0%
ACATATCAGCATCTCGTCAC+TGG + tig0034760:9744-9763 Msa1453560:intergenic 45.0%
TGACGAGATGCTGATATGTG+AGG - tig0034760:9745-9764 Msa1453560:intron 45.0%
ATGTGAGGATCAGTCACACA+CGG - tig0034760:9760-9779 Msa1453560:intron 45.0%
TCACAAACCTGGACATTGAG+AGG + tig0034760:10239-10258 Msa1453560:intergenic 45.0%
CTTCAGCTGGTATAGTGATG+TGG + tig0034760:10471-10490 Msa1453560:intergenic 45.0%
CCCATATCATCATCTTCAGC+TGG + tig0034760:10484-10503 Msa1453560:intergenic 45.0%
GATGATATGGGAGTCCTTTG+GGG - tig0034760:10493-10512 Msa1453560:intron 45.0%
GGAGAATAGAATTCTCGCCA+AGG + tig0034760:11274-11293 Msa1453560:intergenic 45.0%
TCATGAAGTTCTCAGAGCAG+AGG + tig0034760:11559-11578 Msa1453560:intergenic 45.0%
GTGACATAAAGCAGGATCAC+TGG - tig0034760:11725-11744 Msa1453560:intron 45.0%
TTTGTCATCCCAGGTTGTCA+AGG - tig0034760:12294-12313 Msa1453560:CDS 45.0%
!! CTGGTTTTCCTTGACAACCT+GGG + tig0034760:12305-12324 Msa1453560:intergenic 45.0%
!!! TCTGGTTTTCCTTGACAACC+TGG + tig0034760:12306-12325 Msa1453560:intergenic 45.0%
TGATGAATGTGCTACCCTTG+CGG - tig0034760:12360-12379 Msa1453560:CDS 45.0%
CCTCACTATAATCTGATCCC+TGG + tig0034760:12401-12420 Msa1453560:intergenic 45.0%
CCAGGGATCAGATTATAGTG+AGG - tig0034760:12398-12417 Msa1453560:CDS 45.0%
TGAGCTCTGCTGTGATAAGA+TGG - tig0034760:12567-12586 Msa1453560:CDS 45.0%
GATGGATATGCAGCATACTG+AGG - tig0034760:12585-12604 Msa1453560:exon 45.0%
GATATGCAGCATACTGAGGA+AGG - tig0034760:12589-12608 Msa1453560:exon 45.0%
! CATACTGAGGAAGGTTTTCG+TGG - tig0034760:12598-12617 Msa1453560:five_prime_UTR 45.0%
GGGCATTTCTTAGACAACCT+GGG + tig0034760:12650-12669 Msa1453560:intergenic 45.0%
! AGGGCATTTCTTAGACAACC+TGG + tig0034760:12651-12670 Msa1453560:intergenic 45.0%
!! GCCTTTATCTTGGCTTTAGG+AGG + tig0034760:12823-12842 Msa1453560:intergenic 45.0%
!!! TGAAAAAATATTAATTTTTA+CGG - tig0034760:2089-2108 Msa1453560:three_prime_UTR 5.0%
!!! TATTTTTATAATATAATTCA+TGG - tig0034760:3658-3677 Msa1453560:intron 5.0%
!! TTTATTAAAAAAATGATTTA+AGG + tig0034760:4812-4831 Msa1453560:intergenic 5.0%
ACACGGCAACCTGAACAAAC+CGG + tig0034760:2558-2577 Msa1453560:intergenic 50.0%
!! GGATTGGTTCCACCTCCAAA+TGG - tig0034760:2609-2628 Msa1453560:intron 50.0%
TTCCACCTCCAAATGGATCC+AGG - tig0034760:2616-2635 Msa1453560:intron 50.0%
TTCCTGGATCCATTTGGAGG+TGG + tig0034760:2621-2640 Msa1453560:intergenic 50.0%
GACTTCCTGGATCCATTTGG+AGG + tig0034760:2624-2643 Msa1453560:intergenic 50.0%
CCAGACTTCCTGGATCCATT+TGG + tig0034760:2627-2646 Msa1453560:intergenic 50.0%
CCAAATGGATCCAGGAAGTC+TGG - tig0034760:2624-2643 Msa1453560:intron 50.0%
! GATCCAGGAAGTCTGGCTTA+TGG - tig0034760:2631-2650 Msa1453560:intron 50.0%
!! GATTCTGCTGATTCTCCTGC+AGG - tig0034760:2711-2730 Msa1453560:intron 50.0%
TTCAAATACTCCCTCCGTCC+CGG - tig0034760:3182-3201 Msa1453560:intron 50.0%
GGTCAATTAATTCGGGACGG+AGG - tig0034760:3394-3413 Msa1453560:intron 50.0%
! CATTTAGAGCGTGAACTGGG+TGG + tig0034760:4609-4628 Msa1453560:intergenic 50.0%
! ATGTCCAGTGTTGAGCCTGA+TGG - tig0034760:4626-4645 Msa1453560:CDS 50.0%
CATGATCACTACGCTGCAGA+AGG + tig0034760:5187-5206 Msa1453560:intergenic 50.0%
CACTAATTCCTCTGGCGATG+AGG + tig0034760:5363-5382 Msa1453560:intergenic 50.0%
TGATGCGGCACTAATTCCTC+TGG + tig0034760:5371-5390 Msa1453560:intergenic 50.0%
AAGAATGCAACGAGTGGTCC+AGG + tig0034760:5843-5862 Msa1453560:intergenic 50.0%
! TGCCGCATATCAAGTTGTGC+AGG + tig0034760:5943-5962 Msa1453560:intergenic 50.0%
GGTAACCATCCATTTGGCGA+AGG - tig0034760:6123-6142 Msa1453560:intron 50.0%
!! ACTCTGACTGCTCTGAAGCA+AGG - tig0034760:6190-6209 Msa1453560:intron 50.0%
TGAAGCTCCTGTTCCACCAT+TGG - tig0034760:6551-6570 Msa1453560:CDS 50.0%
CTTGGAGAACAACTTGTCCC+AGG + tig0034760:6858-6877 Msa1453560:intergenic 50.0%
CTGGGACAAGTTGTTCTCCA+AGG - tig0034760:6856-6875 Msa1453560:CDS 50.0%
GTCGGGATTGTCTGATATGC+GGG - tig0034760:7520-7539 Msa1453560:intron 50.0%
TCGGGATTGTCTGATATGCG+GGG - tig0034760:7521-7540 Msa1453560:intron 50.0%
GTATCAGCCGATACCTATCG+TGG - tig0034760:7555-7574 Msa1453560:intron 50.0%
GCCTACATGCTTCCACTGAT+AGG - tig0034760:7687-7706 Msa1453560:intron 50.0%
! CCCTATCAGTGGAAGCATGT+AGG + tig0034760:7691-7710 Msa1453560:intergenic 50.0%
AGTCCAGCATCAGCTTCAGA+TGG + tig0034760:7930-7949 Msa1453560:intergenic 50.0%
TCTGGCATCAATAGACCGTG+TGG + tig0034760:7972-7991 Msa1453560:intergenic 50.0%
GGGAATCTGAAGGAAGAGCT+GGG + tig0034760:8094-8113 Msa1453560:intergenic 50.0%
AGGGAATCTGAAGGAAGAGC+TGG + tig0034760:8095-8114 Msa1453560:intergenic 50.0%
ATCTCAAGCAGCATGCTTGG+AGG - tig0034760:8142-8161 Msa1453560:intron 50.0%
GAAGGGAAGAAGATAGGCAG+AGG + tig0034760:8794-8813 Msa1453560:intergenic 50.0%
! CACTAGCAGTAGTGGAACGT+GGG + tig0034760:8846-8865 Msa1453560:intergenic 50.0%
TCCTACCTGAAACACGAGAC+AGG - tig0034760:8954-8973 Msa1453560:CDS 50.0%
! TCCTGTCTCGTGTTTCAGGT+AGG + tig0034760:8958-8977 Msa1453560:intergenic 50.0%
ACAGGATAACATGTCGGGTC+TGG - tig0034760:8972-8991 Msa1453560:CDS 50.0%
GATAACATGTCGGGTCTGGT+GGG - tig0034760:8976-8995 Msa1453560:CDS 50.0%
CGTCTGAAAACCAGTTGAGG+AGG + tig0034760:9277-9296 Msa1453560:intergenic 50.0%
!!! CCTCAACTGGTTTTCAGACG+CGG - tig0034760:9277-9296 Msa1453560:intron 50.0%
TGCTTCTGTGAAGAATGGGG+TGG - tig0034760:9650-9669 Msa1453560:intron 50.0%
CGGGGGGCTATTGAAAAACA+GGG + tig0034760:9943-9962 Msa1453560:intergenic 50.0%
ACGGGGGGCTATTGAAAAAC+AGG + tig0034760:9944-9963 Msa1453560:intergenic 50.0%
AACACTTTCAGCTATGGCGG+TGG - tig0034760:11362-11381 Msa1453560:intron 50.0%
GGAGGTGAGGAATTAGGATG+CGG - tig0034760:11789-11808 Msa1453560:intron 50.0%
!! CTCAACAGTAGGAAAGCACC+AGG + tig0034760:12790-12809 Msa1453560:intergenic 50.0%
GACAAGTGGTGCTCAACAGT+AGG + tig0034760:12801-12820 Msa1453560:intergenic 50.0%
!! CTTGGCTTTAGGAGGACAAG+TGG + tig0034760:12815-12834 Msa1453560:intergenic 50.0%
GAATGAGTAGGCCGACGACT+CGG - tig0034760:2317-2336 Msa1453560:CDS 55.0%
CTCCCATAAGCCAGACTTCC+TGG + tig0034760:2637-2656 Msa1453560:intergenic 55.0%
GTCAGATATTCCGGGACGGA+GGG + tig0034760:3195-3214 Msa1453560:intergenic 55.0%
AGTCAGATATTCCGGGACGG+AGG + tig0034760:3196-3215 Msa1453560:intergenic 55.0%
ACACAGCTTGATGCTGCGAG+TGG + tig0034760:4042-4061 Msa1453560:intergenic 55.0%
CTGGGTGGTCCAATGGATCT+TGG + tig0034760:4594-4613 Msa1453560:intergenic 55.0%
! TCCAGTGTTGAGCCTGATGG+AGG - tig0034760:4629-4648 Msa1453560:CDS 55.0%
ACCTCCATCAGGCTCAACAC+TGG + tig0034760:4633-4652 Msa1453560:intergenic 55.0%
GGACTCTTGACACCTCCATC+AGG + tig0034760:4644-4663 Msa1453560:intergenic 55.0%
AAGCACGGGAGCAAGAGCAA+AGG + tig0034760:4995-5014 Msa1453560:intergenic 55.0%
CATTACAGCCTCATCGCCAG+AGG - tig0034760:5352-5371 Msa1453560:intron 55.0%
AGGACAAAAACACGGGGCAG+TGG - tig0034760:6067-6086 Msa1453560:intron 55.0%
ACAAAAACACGGGGCAGTGG+TGG - tig0034760:6070-6089 Msa1453560:intron 55.0%
CAAAAACACGGGGCAGTGGT+GGG - tig0034760:6071-6090 Msa1453560:intron 55.0%
!! TAGTGACTGGCTTCGCCAGT+GGG - tig0034760:6596-6615 Msa1453560:CDS 55.0%
AGCGACTGTCTGTCAAAGCC+TGG - tig0034760:6837-6856 Msa1453560:CDS 55.0%
GCGACTGTCTGTCAAAGCCT+GGG - tig0034760:6838-6857 Msa1453560:CDS 55.0%
! GCTCCATCTGAAGCTGATGC+TGG - tig0034760:7924-7943 Msa1453560:intron 55.0%
TTGATGCCAGAGCAAGCTCC+TGG - tig0034760:7981-8000 Msa1453560:intron 55.0%
! TTAGCACCAGGAGCTTGCTC+TGG + tig0034760:7990-8009 Msa1453560:intergenic 55.0%
! AGCAAGCTCCTGGTGCTAAG+CGG - tig0034760:7991-8010 Msa1453560:intron 55.0%
ATAAGCACCCGCTTAGCACC+AGG + tig0034760:8002-8021 Msa1453560:intergenic 55.0%
CATGCTTGGAGGACTCCTTG+AGG - tig0034760:8153-8172 Msa1453560:intron 55.0%
! TAGCAGTAGTGGAACGTGGG+CGG + tig0034760:8843-8862 Msa1453560:intergenic 55.0%
! GCACTAGCAGTAGTGGAACG+TGG + tig0034760:8847-8866 Msa1453560:intergenic 55.0%
GTGTCGAGCACTAGCAGTAG+TGG + tig0034760:8854-8873 Msa1453560:intergenic 55.0%
!! TGGAGGGTGTCAGGCAATGA+AGG + tig0034760:8879-8898 Msa1453560:intergenic 55.0%
GGATAACATGTCGGGTCTGG+TGG - tig0034760:8975-8994 Msa1453560:CDS 55.0%
CCGCGTCTGAAAACCAGTTG+AGG + tig0034760:9280-9299 Msa1453560:intergenic 55.0%
!! TGGGGTGGTTCTGAGACCAA+AGG - tig0034760:9665-9684 Msa1453560:intron 55.0%
TGAGGATCAGTCACACACGG+AGG - tig0034760:9763-9782 Msa1453560:intron 55.0%
CGCTCCCGGAAGACCAAAAA+TGG - tig0034760:10416-10435 Msa1453560:intron 55.0%
TCTGCCAGTCTGCATCATGC+CGG + tig0034760:11136-11155 Msa1453560:intergenic 55.0%
CACACAGGAGGGAAGATCCT+TGG - tig0034760:11254-11273 Msa1453560:intron 55.0%
GGGGCAACGTGTTACGCCAA+TGG - tig0034760:2747-2766 Msa1453560:intron 60.0%
GCGTGAACTGGGTGGTCCAA+TGG + tig0034760:4601-4620 Msa1453560:intergenic 60.0%
! GGTCGCTCCAATGGTGGAAC+AGG + tig0034760:6561-6580 Msa1453560:intergenic 60.0%
!! CTAGTGACTGGCTTCGCCAG+TGG - tig0034760:6595-6614 Msa1453560:CDS 60.0%
GATATGCGGGGCTCAGACAG+TGG - tig0034760:7533-7552 Msa1453560:intron 60.0%
! GCAAGCTCCTGGTGCTAAGC+GGG - tig0034760:7992-8011 Msa1453560:intron 60.0%
GGGCCGCCTATAGGATCATC+AGG + tig0034760:8074-8093 Msa1453560:intergenic 60.0%
!! AACGTGGGCGGGTGCTATTG+TGG + tig0034760:8831-8850 Msa1453560:intergenic 60.0%
! AGCAGTAGTGGAACGTGGGC+GGG + tig0034760:8842-8861 Msa1453560:intergenic 60.0%
! CTTACACTCGGTGGCAGCAG+TGG + tig0034760:8899-8918 Msa1453560:intergenic 60.0%
CACTGCTGCCACCGAGTGTA+AGG - tig0034760:8897-8916 Msa1453560:CDS 60.0%
!! CCAATGCAGGGAGGCATCCT+TGG + tig0034760:9053-9072 Msa1453560:intergenic 60.0%
CCAAGGATGCCTCCCTGCAT+TGG - tig0034760:9050-9069 Msa1453560:intron 60.0%
!! TTTGGTCTTCCGGGAGCGCT+TGG + tig0034760:10414-10433 Msa1453560:intergenic 60.0%
TCAGCCGGCATGATGCAGAC+TGG - tig0034760:11129-11148 Msa1453560:intron 60.0%
GGAAGAGCTGGGCCGCCTAT+AGG + tig0034760:8083-8102 Msa1453560:intergenic 65.0%
!! TGGCAGCAGTGGAGGGTGTC+AGG + tig0034760:8888-8907 Msa1453560:intergenic 65.0%
! CACTCGGTGGCAGCAGTGGA+GGG + tig0034760:8895-8914 Msa1453560:intergenic 65.0%
! ACACTCGGTGGCAGCAGTGG+AGG + tig0034760:8896-8915 Msa1453560:intergenic 65.0%
! GGCGGATTTCCAAGCGCTCC+CGG - tig0034760:10402-10421 Msa1453560:intron 65.0%
Chromosome Type Strat End Strand Name
tig0034760 gene 1760 13155 1760 ID=Msa1453560;Name=Msa1453560
tig0034760 mRNA 1760 13155 1760 ID=Msa1453560-mRNA-1;Parent=Msa1453560;Name=Msa1453560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=145|1|1|1|0.92|0.92|14|495|1083
tig0034760 exon 1760 2349 1760 ID=Msa1453560-mRNA-1:exon:19208;Parent=Msa1453560-mRNA-1
tig0034760 exon 2461 2608 2461 ID=Msa1453560-mRNA-1:exon:19207;Parent=Msa1453560-mRNA-1
tig0034760 exon 4401 4664 4401 ID=Msa1453560-mRNA-1:exon:19206;Parent=Msa1453560-mRNA-1
tig0034760 exon 5074 5304 5074 ID=Msa1453560-mRNA-1:exon:19205;Parent=Msa1453560-mRNA-1
tig0034760 exon 5591 5662 5591 ID=Msa1453560-mRNA-1:exon:19204;Parent=Msa1453560-mRNA-1
tig0034760 exon 6465 6663 6465 ID=Msa1453560-mRNA-1:exon:19203;Parent=Msa1453560-mRNA-1
tig0034760 exon 6741 7025 6741 ID=Msa1453560-mRNA-1:exon:19202;Parent=Msa1453560-mRNA-1
tig0034760 exon 7254 7432 7254 ID=Msa1453560-mRNA-1:exon:19201;Parent=Msa1453560-mRNA-1
tig0034760 exon 8038 8146 8038 ID=Msa1453560-mRNA-1:exon:19200;Parent=Msa1453560-mRNA-1
tig0034760 exon 8278 9014 8278 ID=Msa1453560-mRNA-1:exon:19199;Parent=Msa1453560-mRNA-1
tig0034760 exon 10800 11055 10800 ID=Msa1453560-mRNA-1:exon:19198;Parent=Msa1453560-mRNA-1
tig0034760 exon 11828 12424 11828 ID=Msa1453560-mRNA-1:exon:19197;Parent=Msa1453560-mRNA-1
tig0034760 exon 12517 12622 12517 ID=Msa1453560-mRNA-1:exon:19196;Parent=Msa1453560-mRNA-1
tig0034760 exon 13037 13155 13037 ID=Msa1453560-mRNA-1:exon:19195;Parent=Msa1453560-mRNA-1
tig0034760 five_prime_UTR 13037 13155 13037 ID=Msa1453560-mRNA-1:five_prime_utr;Parent=Msa1453560-mRNA-1
tig0034760 five_prime_UTR 12597 12622 12597 ID=Msa1453560-mRNA-1:five_prime_utr;Parent=Msa1453560-mRNA-1
tig0034760 CDS 12517 12596 12517 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 11828 12424 11828 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 10800 11055 10800 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 8278 9014 8278 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 8038 8146 8038 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 7254 7432 7254 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 6741 7025 6741 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 6465 6663 6465 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 5591 5662 5591 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 5074 5304 5074 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 4401 4664 4401 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 2461 2608 2461 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 CDS 2255 2349 2255 ID=Msa1453560-mRNA-1:cds;Parent=Msa1453560-mRNA-1
tig0034760 three_prime_UTR 1760 2254 1760 ID=Msa1453560-mRNA-1:three_prime_utr;Parent=Msa1453560-mRNA-1
Gene Sequence

>Msa1453560

ATGAGTAGGCCGACGACTCGGAGTAAAAATAAAAGACAAAAACAGGGCGATGATGGTGTCTGTACTAATGAAACATGGAGGAAAATTCACGAAACCGGTGTGGTTACTGAAGATGATGTTAATCAGTTGTATATGATTTGGAAACCGGTTTGTTCAGGTTGCCGTGTAAACACGAAAGATAACCCTAATTGCTTTTGTGGATTGGTTCCACCTCCAAATGGATCCAGGAAGTCTGGCTTATGGGAGAAGATGTCAGATTTTGTTGAAAGTCTTGGCCCTGATCCAAACAATGATCTTCGTGATTCTGCTGATTCTCCTGCAGGTCTAACAAATCTTGGGGCAACGTGTTACGCCAATGGAATACTCCAATGCTTGTTCATGAACAAATTATTCCGAGAAGGCATATTTTCCGCAGAACCAGATGTTTTAAGGCAACAACCGGTGTTAGATCAACTAGCTCGACTTTTTGCGCAGTTACAAGCTAGTAAAATGGCTTATATAGATTCTTCTCCCTTTGTGAAAACACTGGAGTTAGATAATGGAGTTCAGCAGGATAGCCATGAATTCTTGACATTGCTTCTGTCATTGCTTGAGCGTTGTCTGAGTCATTCTAAAGTTCCCAAGGCAAGAACAGTAGTTCAAGATCTTTTCCGCGGAAGTGTATCTCATGTGACAACGTGCTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAACGGAAGATTTTTATGAGTTAGAGTTGAATGTGAAGGGATTGAAAAGTTTAGATGAGAGTCTAGATGATTACCTAGCTGTTGAAGAGCTTCATGGAGACAATCAATATTTTTGTGATTCATGCAACACAAGAGTTGATGCCACTCGCAGCATCAAGCTGTGTACATTACCTGACGTACTTAATTTTCAACTTAAACGTTGTGTCTTTCTTCCAAAGACTACTACAAAGAAGAAAATTACTTCTGCATTTTCATTTCCTGCACAACTTGATATGCGGCACAGACTGCCTGAGTTGTCTCAGTTTGATTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGAACCGGTGTTAATAGTGGCCATTACATTGCTCACATCAAGGACAAAAACACGGGGCAGTGGTGGGAATTTGATGATGAGCATGTTACTAATTTGGGTAACCATCCATTTGGCGAAGGATCTTCTAGTTCTACTACCAAGTCCATTGCAACTGATGCAATTCACTCTGACTGCTCTGAAGCAAGGATAGCTGAAAGTAATGGAAACGGCTTCCACACCACCCATTCACAATCTTCGCTTATAGAGACATTTTCTTCTTGTGATGCATACATGTTGATGTACCATCTTAGACATACAAAAGGTATAAAGGAAAATGGGGGCATAGTTTGCGGTGCTAGCCATAAAGAAATAGAGGGTGTTTTAGCTACTGCACAAGATGATGCTTCTCTTCCTTCTCATCTTTATGATGAGATTTGCAATGTCAACGCCTCATATCTTGATGCTTGTCAACAATATAGTCATAGGAAAGAGTTAGAATTGAGTCGTATTACTGATAGGAGACATGAAGTTCGATCTATTTTAGCTGAAGCTCCTGTTCCACCATTGGAGCGACCATTTTATTGGATTTCTAGTGACTGGCTTCGCCAGTGGGCTGACAACATTATTCCAACTTCTATCGACAACGCATCCATCCAATGTTCACATGGGAAAGTCCCAGTTTCAAAGGTTCCCTTAATAAAGCGACTGTCTGTCAAAGCCTGGGACAAGTTGTTCTCCAAGTATGGTGGGATTCCAACACTATCTCATGATGACCATTGTCGGGATTGTCTGATATGCGGGGCTCAGACAGTGGTATCAGCCGATACCTATCGTGGTAGAAGAGAATCATTGAAGTCACTTGCACGGGATATTCTTGATGGGAACTGTCTAGATGGAAAGTATTTCATATCCAGACCATGGTTGCAGCAGTGGTGGAAAAGAAAAGTTCTTGATGCTCCATCTGAAGCTGATGCTGGACTAACAGCAGCAATTAGTTGTCCACACGGTCTATTGATGCCAGAGCAAGCTCCTGGTGCTAAGCGGGTGCTTATTCCTGAGACTTTTTGGCTCTTCTTATACGAAGATGCTATTTCTGTAAAACCTGATGATCCTATAGGCGGCCCAGCTCTTCCTTCAGATTCCCTAGAGTGTTCTCAATGCACTGTTGAATTATCTCAAGCAGCATGCTTGGAGGACTCCTTGAGATTAGTTAAACAAAAGCAGCGTCAGAATCATGAGAAATTATTCCAGGCTAAAAGTATGCCACTCTCTGTGCATTGCAAATATTTCTTGGTGCCTTCTTCATGGATTTCTAAATGGAGAAATTACATTAGTCCACCATTCAAGAATCTAGATAAACCTGAAACTTTAGATGGGGTAATTGATTCGCTGATGTGTGAAAAGCACTCACGACTTATTGAAAGACCTCCTCAACTGGTTTTCAGACGCGGTGCTATAATCCAGCGAGAATCTTCGGCAGGTGGCTTAACCATCATATCTGAGAATGATTGGATATGCTTCTGTGAAGAATGGGGTGGTTCTGAGACCAAAGGAATATCAGCAACAATTGATTATATTAATGATTCAGATAACTTATTGACTGGATCCAGTGACGAGATGCTGATATGTGAGGATCAGTCACACACGGAGGATAAAATGAATAATGAAAATGGAACTGGACAAATTTTGATCAAGACTTGTCCTGAGGTTTGTGAAAGTTGCATTGGAGAAAAAGAAAGCTGTGAATTAATGCATAAACTTAACTATTGCAATGAGGACATATGTGTAATTCTTGTACGTGGTAAGGAGGTACCTAAATCAATATTGGAGGCCTCAAAGGGATTAGTTGAAACAGATCGGCGGATTTCCAAGCGCTCCCGGAAGACCAAAAATGGAAGTTCGGTTAGTCTGAAAGTTTCTGCTTCCACATCACTATACCAGCTGAAGATGATGATATGGGAGTCCTTTGGGGTTGTCAAGGAAAACCAGATCCTACATAAAGGTGATAGGATAATTGATATGGATGATGAATGTGCTACCCTTGCGGATGCAAATATATTTGCCAGGGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATCGAGATATTGCGGATGAGCTCTGCTGTGATAAGATGGATATGCAGCATACTGAGGAAGGTTTTCGTGGAACACTTCTTACAGCAAACATTTCATCCCAGGTTGTCTAA
Protein sequence

>Msa1453560

MSRPTTRSKNKRQKQGDDGVCTNETWRKIHETGVVTEDDVNQLYMIWKPVCSGCRVNTKDNPNCFCGLVPPPNGSRKSGLWEKMSDFVESLGPDPNNDLRDSADSPAGLTNLGATCYANGILQCLFMNKLFREGIFSAEPDVLRQQPVLDQLARLFAQLQASKMAYIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLERCLSHSKVPKARTVVQDLFRGSVSHVTTCSQCGRDSEASSKTEDFYELELNVKGLKSLDESLDDYLAVEELHGDNQYFCDSCNTRVDATRSIKLCTLPDVLNFQLKRCVFLPKTTTKKKITSAFSFPAQLDMRHRLPELSQFDLVYDLSAVLIHKGTGVNSGHYIAHIKDKNTGQWWEFDDEHVTNLGNHPFGEGSSSSTTKSIATDAIHSDCSEARIAESNGNGFHTTHSQSSLIETFSSCDAYMLMYHLRHTKGIKENGGIVCGASHKEIEGVLATAQDDASLPSHLYDEICNVNASYLDACQQYSHRKELELSRITDRRHEVRSILAEAPVPPLERPFYWISSDWLRQWADNIIPTSIDNASIQCSHGKVPVSKVPLIKRLSVKAWDKLFSKYGGIPTLSHDDHCRDCLICGAQTVVSADTYRGRRESLKSLARDILDGNCLDGKYFISRPWLQQWWKRKVLDAPSEADAGLTAAISCPHGLLMPEQAPGAKRVLIPETFWLFLYEDAISVKPDDPIGGPALPSDSLECSQCTVELSQAACLEDSLRLVKQKQRQNHEKLFQAKSMPLSVHCKYFLVPSSWISKWRNYISPPFKNLDKPETLDGVIDSLMCEKHSRLIERPPQLVFRRGAIIQRESSAGGLTIISENDWICFCEEWGGSETKGISATIDYINDSDNLLTGSSDEMLICEDQSHTEDKMNNENGTGQILIKTCPEVCESCIGEKESCELMHKLNYCNEDICVILVRGKEVPKSILEASKGLVETDRRISKRSRKTKNGSSVSLKVSASTSLYQLKMMIWESFGVVKENQILHKGDRIIDMDDECATLADANIFARDQIIVRDSEIHENRDIADELCCDKMDMQHTEEGFRGTLLTANISSQVV*