Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697670 | XP_013457199.1 | 94.694 | 245 | 10 | 2 | 1 | 245 | 1 | 242 | 1.85e-166 | 469 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697670 | I3SQK3 | 94.694 | 245 | 10 | 2 | 1 | 245 | 1 | 242 | 8.82e-167 | 469 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076000 | Msa0697670 | 0.800955 | 1.130427e-48 | -8.615850e-47 |
| Msa0654760 | Msa0697670 | -0.805443 | 1.331745e-49 | -8.615850e-47 |
| Msa0682900 | Msa0697670 | 0.801271 | 9.743577e-49 | -8.615850e-47 |
| Msa0697670 | Msa0703230 | 0.814278 | 1.671347e-51 | -8.615850e-47 |
| Msa0697670 | Msa0709500 | 0.821737 | 3.444550e-53 | -8.615850e-47 |
| Msa0697670 | Msa0738630 | -0.805039 | 1.618390e-49 | -8.615850e-47 |
| Msa0697670 | Msa0783760 | -0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0697670 | Msa0790850 | 0.821444 | 4.023965e-53 | -8.615850e-47 |
| Msa0697670 | Msa0819030 | -0.810362 | 1.196841e-50 | -8.615850e-47 |
| Msa0697670 | Msa1081150 | 0.801021 | 1.096057e-48 | -8.615850e-47 |
| Msa0697670 | Msa1083150 | 0.802817 | 4.685427e-49 | -8.615850e-47 |
| Msa0697670 | Msa1125760 | 0.831772 | 1.381393e-55 | -8.615850e-47 |
| Msa0697670 | Msa1171360 | 0.820486 | 6.687661e-53 | -8.615850e-47 |
| Msa0697670 | Msa1187840 | 0.805011 | 1.640054e-49 | -8.615850e-47 |
| Msa0697670 | Msa1281180 | 0.807018 | 6.205209e-50 | -8.615850e-47 |
| Msa0697670 | Msa1316780 | 0.836947 | 6.942654e-57 | -8.615850e-47 |
| Msa0697670 | Msa1316830 | 0.843701 | 1.191652e-58 | -8.615850e-47 |
| Msa0173820 | Msa0697670 | 0.804727 | 1.880416e-49 | -8.615850e-47 |
| Msa0173830 | Msa0697670 | 0.801369 | 9.300220e-49 | -8.615850e-47 |
| Msa0186890 | Msa0697670 | 0.810115 | 1.353201e-50 | -8.615850e-47 |
| Msa0425220 | Msa0697670 | 0.800275 | 1.555433e-48 | -8.615850e-47 |
| Msa0267970 | Msa0697670 | 0.800220 | 1.596350e-48 | -8.615850e-47 |
| Msa0342360 | Msa0697670 | 0.801015 | 1.099181e-48 | -8.615850e-47 |
| Msa0483860 | Msa0697670 | 0.803774 | 2.969049e-49 | -8.615850e-47 |
| Msa0541860 | Msa0697670 | 0.811854 | 5.683505e-51 | -8.615850e-47 |
| Msa0561540 | Msa0697670 | -0.802239 | 6.165805e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697670 | MtrunA17_Chr4g0050501 | 94.694 | 245 | 10 | 2 | 1 | 245 | 1 | 242 | 1.70e-170 | 469 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0697670 | AT5G64160.1 | 59.036 | 249 | 76 | 8 | 1 | 245 | 1 | 227 | 5.28e-76 | 230 |
Find 90 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCCGCATCACATCCATCTT+TGG | 0.168683 | 4_4:-67731484 | Msa0697670:CDS |
| GATCGTTGATCCTTTCTTCT+TGG | 0.202699 | 4_4:+67727851 | None:intergenic |
| GCCGCATCACATCCATCTTT+GGG | 0.282318 | 4_4:-67731483 | Msa0697670:CDS |
| AACGAACTGCGAAGTGGTTC+TGG | 0.282560 | 4_4:-67731676 | Msa0697670:five_prime_UTR |
| TTCTTCTTGGCCTCTGCACT+TGG | 0.301542 | 4_4:+67727864 | None:intergenic |
| CAACACTGTCGCAAACTTGC+TGG | 0.341217 | 4_4:+67727687 | None:intergenic |
| CTTATTCAAGGCTATTCTTC+CGG | 0.343020 | 4_4:-67731600 | Msa0697670:CDS |
| ATGTGATGCGGCGGAGGGTT+CGG | 0.359682 | 4_4:+67731494 | None:intergenic |
| TCCAACTCGCATGAGATGAT+TGG | 0.381351 | 4_4:+67727796 | None:intergenic |
| ATTCTCCAGCGCTATGGTTA+AGG | 0.390137 | 4_4:+67731258 | None:intergenic |
| CAGCATTTCGTAATCTTGTT+CGG | 0.404676 | 4_4:+67727543 | None:intergenic |
| AGACCGGAAGCGGAAGGAAG+TGG | 0.417648 | 4_4:+67731432 | None:intergenic |
| TTGGCCTCTGCACTTGGATC+CGG | 0.420143 | 4_4:+67727870 | None:intergenic |
| CTCTGCAGCATCTTCAGCAT+TGG | 0.420774 | 4_4:+67728358 | None:intergenic |
| TCTGCACTTGGATCCGGCGG+AGG | 0.435867 | 4_4:+67727876 | None:intergenic |
| GAGGCAAAAGCTCAACTAGT+TGG | 0.439322 | 4_4:-67728485 | Msa0697670:CDS |
| TCTGCAGCATCTTCAGCATT+GGG | 0.439771 | 4_4:+67728359 | None:intergenic |
| ATGAGCTTATCACTTATTCA+AGG | 0.441486 | 4_4:-67731612 | Msa0697670:CDS |
| AGCATCTTCAGCATTGGGAT+TGG | 0.451701 | 4_4:+67728364 | None:intergenic |
| GAACCACTTCGCAGTTCGTT+CGG | 0.455275 | 4_4:+67731679 | None:intergenic |
| GCATTGGGATTGGTTGCAGT+TGG | 0.459137 | 4_4:+67728374 | None:intergenic |
| ACGTGCACTGGAGTAGGTCT+TGG | 0.462600 | 4_4:+67727929 | None:intergenic |
| ACCGTGAGCACATCTGAAAC+AGG | 0.470137 | 4_4:-67728407 | Msa0697670:CDS |
| AGATGGATGTGATGCGGCGG+AGG | 0.475272 | 4_4:+67731488 | None:intergenic |
| AGGCAAAAGCTCAACTAGTT+GGG | 0.477644 | 4_4:-67728484 | Msa0697670:CDS |
| GACCGGAAGCGGAAGGAAGT+GGG | 0.480160 | 4_4:+67731433 | None:intergenic |
| GCAGACCATTCCACGTGCAC+TGG | 0.484635 | 4_4:+67727917 | None:intergenic |
| CGTGCACTGGAGTAGGTCTT+GGG | 0.486772 | 4_4:+67727930 | None:intergenic |
| GGAGGGCGATCACCACATAC+AGG | 0.489871 | 4_4:+67727894 | None:intergenic |
| TCAGATGTGCTCACGGTAGC+TGG | 0.492603 | 4_4:+67728413 | None:intergenic |
| AACACTGTCGCAAACTTGCT+GGG | 0.495066 | 4_4:+67727688 | None:intergenic |
| GCCTCTGCACTTGGATCCGG+CGG | 0.501837 | 4_4:+67727873 | None:intergenic |
| ATGATCATCAACGAGGTTCA+AGG | 0.506110 | 4_4:-67731220 | Msa0697670:CDS |
| AGTTGTAGTCCGTGTCGTCT+TGG | 0.510789 | 4_4:+67731520 | None:intergenic |
| AGTGCAGAGGCCAAGAAGAA+AGG | 0.513841 | 4_4:-67727861 | Msa0697670:CDS |
| TTAAGGAATTGAGGAGGTCC+TGG | 0.516514 | 4_4:+67731275 | None:intergenic |
| ATGTGGTGATCGCCCTCCGC+CGG | 0.519780 | 4_4:-67727889 | Msa0697670:CDS |
| CACATCTGAAACAGGCAAGC+GGG | 0.519902 | 4_4:-67728399 | Msa0697670:CDS |
| TGCAGAAGGAAGACCGGAAG+CGG | 0.526172 | 4_4:+67731422 | None:intergenic |
| GTCGTCTTGGTCGTCGAAGT+CGG | 0.527088 | 4_4:+67731533 | None:intergenic |
| CTGCACTTGGATCCGGCGGA+GGG | 0.529093 | 4_4:+67727877 | None:intergenic |
| CTACTCCAGTGCACGTGGAA+TGG | 0.536334 | 4_4:-67727922 | Msa0697670:CDS |
| GATTGAATTCTCCAGCGCTA+TGG | 0.541090 | 4_4:+67731252 | None:intergenic |
| ATTATCTGTGTTTCCTACGT+AGG | 0.541405 | 4_4:-67727731 | Msa0697670:three_prime_UTR |
| GCCTGTTTCAGATGTGCTCA+CGG | 0.542793 | 4_4:+67728406 | None:intergenic |
| GCCAATCATCTCATGCGAGT+TGG | 0.547339 | 4_4:-67727797 | Msa0697670:CDS |
| CATTCATGCAATTGATGCAA+CGG | 0.548160 | 4_4:-67727486 | Msa0697670:three_prime_UTR |
| CGGTAGCTGGTGTTGGTGGT+TGG | 0.548234 | 4_4:+67728426 | None:intergenic |
| CAATTCCTTAACCATAGCGC+TGG | 0.555062 | 4_4:-67731263 | Msa0697670:CDS |
| ACCGGAAGCGGAAGGAAGTG+GGG | 0.557152 | 4_4:+67731434 | None:intergenic |
| GCGCTATGGTTAAGGAATTG+AGG | 0.561980 | 4_4:+67731266 | None:intergenic |
| GTGCTCACGGTAGCTGGTGT+TGG | 0.563568 | 4_4:+67728419 | None:intergenic |
| CGAGTAAGAAGTGACATCAA+TGG | 0.565304 | 4_4:-67728452 | Msa0697670:CDS |
| GAAGGAAGACCGGAAGCGGA+AGG | 0.566152 | 4_4:+67731426 | None:intergenic |
| GAGAAGAGGGATTTACCCAC+TGG | 0.566664 | 4_4:-67731182 | Msa0697670:intron |
| GGCATCATCGCAAGGAGAAG+AGG | 0.574479 | 4_4:-67731196 | Msa0697670:CDS |
| CCGCATCACATCCATCTTTG+GGG | 0.580487 | 4_4:-67731482 | Msa0697670:CDS |
| TCTGGCAGGTGCGGTAGTAG+AGG | 0.582011 | 4_4:-67728504 | Msa0697670:intron |
| CTCACGGTAGCTGGTGTTGG+TGG | 0.586032 | 4_4:+67728422 | None:intergenic |
| TTCAAGGCGGCATCATCGCA+AGG | 0.587283 | 4_4:-67731204 | Msa0697670:CDS |
| AAGATTACGAAATGCTGTGA+TGG | 0.589182 | 4_4:-67727537 | Msa0697670:three_prime_UTR |
| CATTCCACGTGCACTGGAGT+AGG | 0.589238 | 4_4:+67727923 | None:intergenic |
| AAGTCGGAATCGTGGATGTG+AGG | 0.589425 | 4_4:+67731549 | None:intergenic |
| GTCGAATGCAGAAGGAAGAC+CGG | 0.592010 | 4_4:+67731416 | None:intergenic |
| AACAACACAGACTGATCAGA+GGG | 0.592301 | 4_4:+67727459 | None:intergenic |
| CCGGAAGCGGAAGGAAGTGG+GGG | 0.593603 | 4_4:+67731435 | None:intergenic |
| GAGAAAGCGTCGAATGCAGA+AGG | 0.599301 | 4_4:+67731408 | None:intergenic |
| GCATCATCGCAAGGAGAAGA+GGG | 0.601941 | 4_4:-67731195 | Msa0697670:CDS |
| GATGGATGTGATGCGGCGGA+GGG | 0.602413 | 4_4:+67731489 | None:intergenic |
| GGTCGTCGAAGTCGGAATCG+TGG | 0.602909 | 4_4:+67731541 | None:intergenic |
| TGACCGAACGAACTGCGAAG+TGG | 0.606261 | 4_4:-67731682 | Msa0697670:five_prime_UTR |
| GTGAAACAGAGATGCAGCTG+AGG | 0.607972 | 4_4:-67727770 | Msa0697670:CDS |
| TGATGCGGCGGAGGGTTCGG+CGG | 0.608889 | 4_4:+67731497 | None:intergenic |
| GGAATGGTCTGCCCTGTATG+TGG | 0.616539 | 4_4:-67727906 | Msa0697670:CDS |
| GAGGGCGATCACCACATACA+GGG | 0.629392 | 4_4:+67727895 | None:intergenic |
| CCCCAAAGATGGATGTGATG+CGG | 0.629660 | 4_4:+67731482 | None:intergenic |
| CAAAGATGGATGTGATGCGG+CGG | 0.630512 | 4_4:+67731485 | None:intergenic |
| AAGACCTACTCCAGTGCACG+TGG | 0.634183 | 4_4:-67727927 | Msa0697670:CDS |
| TCCGCCGGATCCAAGTGCAG+AGG | 0.638891 | 4_4:-67727874 | Msa0697670:CDS |
| AAACAACACAGACTGATCAG+AGG | 0.646025 | 4_4:+67727458 | None:intergenic |
| GCACATCTGAAACAGGCAAG+CGG | 0.661954 | 4_4:-67728400 | Msa0697670:CDS |
| AGGATCAACGATCAAAGACA+AGG | 0.663899 | 4_4:-67727841 | Msa0697670:CDS |
| CTTCGACGACCAAGACGACA+CGG | 0.671894 | 4_4:-67731529 | Msa0697670:CDS |
| CGCATCACATCCATCTTTGG+GGG | 0.686789 | 4_4:-67731481 | Msa0697670:CDS |
| GTAAGAAGTGACATCAATGG+AGG | 0.689619 | 4_4:-67728449 | Msa0697670:CDS |
| TATAGAATGTGTGTGCAGTG+TGG | 0.715016 | 4_4:-67727957 | Msa0697670:intron |
| CTATGGTTAAGGAATTGAGG+AGG | 0.718424 | 4_4:+67731269 | None:intergenic |
| ATCATCAACGAGGTTCAAGG+CGG | 0.723874 | 4_4:-67731217 | Msa0697670:CDS |
| TCACAGCATGAAACCTACGT+AGG | 0.733210 | 4_4:+67727718 | None:intergenic |
| CCACAAAATGATCATCAACG+AGG | 0.758891 | 4_4:-67731227 | Msa0697670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTGAATTTATTTATTA+AGG | + | chr4_4:67727807-67727826 | None:intergenic | 10.0% |
| !!! | GAAATAAAAATAATATTTTC+AGG | + | chr4_4:67730872-67730891 | None:intergenic | 10.0% |
| !! | AAATTAGAAGGAAATTACTT+CGG | + | chr4_4:67727778-67727797 | None:intergenic | 20.0% |
| !! | TTAAGGTTTATGAAATTAGA+AGG | + | chr4_4:67727790-67727809 | None:intergenic | 20.0% |
| !! | ATTAAGAAAAACATAAGAAG+AGG | + | chr4_4:67727859-67727878 | None:intergenic | 20.0% |
| !! | AAAATCATAAGACTATTGTA+AGG | + | chr4_4:67728123-67728142 | None:intergenic | 20.0% |
| !!! | TATTGGATATTTTGTGTTTA+TGG | + | chr4_4:67728223-67728242 | None:intergenic | 20.0% |
| !! | TTGTTTAATTACTTATCATC+TGG | + | chr4_4:67728295-67728314 | None:intergenic | 20.0% |
| !!! | ATTGAAGATTTAAAACTTAG+TGG | + | chr4_4:67728348-67728367 | None:intergenic | 20.0% |
| !! | ATTGAACTTAAAAGACAAAA+AGG | - | chr4_4:67728973-67728992 | Msa0697670:intron | 20.0% |
| !!! | AGTTTTAAAATCTTCAATCA+TGG | + | chr4_4:67729321-67729340 | None:intergenic | 20.0% |
| !!! | TTGAAGATTTTAAAACTCAA+TGG | - | chr4_4:67729324-67729343 | Msa0697670:intron | 20.0% |
| !!! | ATTTTTTTAGTGATTTACTC+TGG | - | chr4_4:67729848-67729867 | Msa0697670:intron | 20.0% |
| !!! | TTTTTTTAGTGATTTACTCT+GGG | - | chr4_4:67729849-67729868 | Msa0697670:intron | 20.0% |
| !! | TATTTATTATGTAAGCACTT+TGG | + | chr4_4:67730398-67730417 | None:intergenic | 20.0% |
| !!! | TCTTAAATGTACTTTTATCA+AGG | - | chr4_4:67730502-67730521 | Msa0697670:intron | 20.0% |
| !! | TTATCAAGGAAAATAACTAA+TGG | - | chr4_4:67730516-67730535 | Msa0697670:intron | 20.0% |
| !! | ATCTTCTCTTAATTTCTTAT+TGG | - | chr4_4:67730565-67730584 | Msa0697670:intron | 20.0% |
| !! | TCTTCTCTTAATTTCTTATT+GGG | - | chr4_4:67730566-67730585 | Msa0697670:intron | 20.0% |
| !! | TCGACAAATATTAATGAAAT+GGG | + | chr4_4:67730625-67730644 | None:intergenic | 20.0% |
| !! | ATCGACAAATATTAATGAAA+TGG | + | chr4_4:67730626-67730645 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTTAAAGCAAAAT+TGG | - | chr4_4:67731090-67731109 | Msa0697670:intron | 20.0% |
| !! | TTTTTCTTAATTGAGATTCC+AGG | - | chr4_4:67727868-67727887 | Msa0697670:CDS | 25.0% |
| !!! | TTTTGAAAGTGCTCTAATAT+TGG | + | chr4_4:67728240-67728259 | None:intergenic | 25.0% |
| ! | TCAAAATTGTTTAGTGCAAT+AGG | - | chr4_4:67728254-67728273 | Msa0697670:intron | 25.0% |
| ! | ACAAACTTGGAATTTAATCA+AGG | + | chr4_4:67728503-67728522 | None:intergenic | 25.0% |
| ! | AAGTTCAATGAAATCTTCTT+CGG | - | chr4_4:67728805-67728824 | Msa0697670:intron | 25.0% |
| ! | TAAAAGAGACAAGAAAACAA+AGG | - | chr4_4:67728902-67728921 | Msa0697670:intron | 25.0% |
| !! | ATCAAAGAGCTTTATATCTT+AGG | + | chr4_4:67729195-67729214 | None:intergenic | 25.0% |
| ! | TCATCAATAGAAAGATAATG+AGG | + | chr4_4:67729297-67729316 | None:intergenic | 25.0% |
| !!! | AGTTATTTTTTCATGCTGAT+GGG | + | chr4_4:67729646-67729665 | None:intergenic | 25.0% |
| !!! | TAGTTATTTTTTCATGCTGA+TGG | + | chr4_4:67729647-67729666 | None:intergenic | 25.0% |
| ! | TACTTGTATATACACACAAA+AGG | - | chr4_4:67729824-67729843 | Msa0697670:intron | 25.0% |
| ! | ATATTAAGTTTCCTCCAATA+CGG | - | chr4_4:67730087-67730106 | Msa0697670:intron | 25.0% |
| ! | TTCATTAATATTTGTCGATG+TGG | - | chr4_4:67730627-67730646 | Msa0697670:intron | 25.0% |
| ! | TCATTAATATTTGTCGATGT+GGG | - | chr4_4:67730628-67730647 | Msa0697670:intron | 25.0% |
| !! | TGGGTAGATTTTATGTTTTT+TGG | - | chr4_4:67731146-67731165 | Msa0697670:intron | 25.0% |
| ! | AAGACAAGGAAAAATCTAAA+AGG | - | chr4_4:67731334-67731353 | Msa0697670:intron | 25.0% |
| ATGAGCTTATCACTTATTCA+AGG | - | chr4_4:67727549-67727568 | Msa0697670:three_prime_UTR | 30.0% | |
| TAAGAAGAGGTTCAATAACT+AGG | + | chr4_4:67727846-67727865 | None:intergenic | 30.0% | |
| AAATAGAATGGAATACCAGT+GGG | + | chr4_4:67727997-67728016 | None:intergenic | 30.0% | |
| TAAATAGAATGGAATACCAG+TGG | + | chr4_4:67727998-67728017 | None:intergenic | 30.0% | |
| ATCAAAGAGCAATAGATCTT+AGG | - | chr4_4:67728451-67728470 | Msa0697670:CDS | 30.0% | |
| ! | ATATTGATAACAGTGTTGCT+TGG | + | chr4_4:67728778-67728797 | None:intergenic | 30.0% |
| TAAAAGAGACAAGAAAACGA+AGG | + | chr4_4:67728841-67728860 | None:intergenic | 30.0% | |
| AAGTTCAATCATTTCAGTGT+CGG | + | chr4_4:67729029-67729048 | None:intergenic | 30.0% | |
| AGAAGCTTGGAATTTAATCA+AGG | - | chr4_4:67729143-67729162 | Msa0697670:intron | 30.0% | |
| TGGAATTTAATCAAGGATTG+TGG | - | chr4_4:67729150-67729169 | Msa0697670:intron | 30.0% | |
| ! | TTTTGTGTACGCTAATAATG+AGG | - | chr4_4:67729469-67729488 | Msa0697670:intron | 30.0% |
| !!! | GTTATTTTTTCATGCTGATG+GGG | + | chr4_4:67729645-67729664 | None:intergenic | 30.0% |
| ATCCACCATTCATACAAATA+GGG | + | chr4_4:67729963-67729982 | None:intergenic | 30.0% | |
| TATCCACCATTCATACAAAT+AGG | + | chr4_4:67729964-67729983 | None:intergenic | 30.0% | |
| AAAAGTTAAATCCGTATTGG+AGG | + | chr4_4:67730101-67730120 | None:intergenic | 30.0% | |
| AGCAAAAGTTAAATCCGTAT+TGG | + | chr4_4:67730104-67730123 | None:intergenic | 30.0% | |
| AACTGATGTTGTATGACTTA+TGG | + | chr4_4:67730150-67730169 | None:intergenic | 30.0% | |
| ! | TATATGCGATGCTATTTGAT+TGG | - | chr4_4:67730201-67730220 | Msa0697670:intron | 30.0% |
| TTTAATCCCAATGATGTCAA+TGG | + | chr4_4:67730249-67730268 | None:intergenic | 30.0% | |
| GTACATCATAGATTAAGTAC+AGG | + | chr4_4:67730297-67730316 | None:intergenic | 30.0% | |
| ! | GCTTTTCAGTCTTTCTTTTT+TGG | + | chr4_4:67730376-67730395 | None:intergenic | 30.0% |
| GTATGTATTATTCCTTTCTG+AGG | - | chr4_4:67730834-67730853 | Msa0697670:intron | 30.0% | |
| ! | ACATGCCAATTTTGCTTTAA+AGG | + | chr4_4:67731098-67731117 | None:intergenic | 30.0% |
| AGGAAAAATCTAAAAGGATG+AGG | - | chr4_4:67731340-67731359 | Msa0697670:intron | 30.0% | |
| GGAAAAATCTAAAAGGATGA+GGG | - | chr4_4:67731341-67731360 | Msa0697670:intron | 30.0% | |
| GAAAAATCTAAAAGGATGAG+GGG | - | chr4_4:67731342-67731361 | Msa0697670:intron | 30.0% | |
| CTTATTCAAGGCTATTCTTC+CGG | - | chr4_4:67727561-67727580 | Msa0697670:three_prime_UTR | 35.0% | |
| TTCTTCTTCTTCTTCTTCAC+CGG | + | chr4_4:67727583-67727602 | None:intergenic | 35.0% | |
| TTGTGCTTCTGAGTATGTTA+GGG | - | chr4_4:67728045-67728064 | Msa0697670:intron | 35.0% | |
| !! | CAATTTTAGGGGAACAAACT+TGG | + | chr4_4:67728516-67728535 | None:intergenic | 35.0% |
| ! | CAAGTTTGTTCCCCTAAAAT+TGG | - | chr4_4:67728514-67728533 | Msa0697670:intron | 35.0% |
| !! | TTGAGTTGCCTCCAATTTTA+GGG | + | chr4_4:67728528-67728547 | None:intergenic | 35.0% |
| !!! | TTTGAGTTGCCTCCAATTTT+AGG | + | chr4_4:67728529-67728548 | None:intergenic | 35.0% |
| GTCTCTTTAAGCTTGATTGT+TGG | - | chr4_4:67728610-67728629 | Msa0697670:intron | 35.0% | |
| CTCTTTGTTCTTAACCACTT+TGG | - | chr4_4:67728634-67728653 | Msa0697670:intron | 35.0% | |
| CAAAAGGAAGAAATCCAAAG+TGG | + | chr4_4:67728651-67728670 | None:intergenic | 35.0% | |
| ! | AGGATCTAGTGATTGCATTT+TGG | - | chr4_4:67728691-67728710 | Msa0697670:intron | 35.0% |
| ! | GGATCTAGTGATTGCATTTT+GGG | - | chr4_4:67728692-67728711 | Msa0697670:intron | 35.0% |
| GAGACAAGAAAACAAAGGTA+AGG | - | chr4_4:67728907-67728926 | Msa0697670:intron | 35.0% | |
| CAAAAAGGAAAAATCCGAAG+TGG | - | chr4_4:67728988-67729007 | Msa0697670:intron | 35.0% | |
| ACTTAAAGAGTCAATGCATG+TGG | - | chr4_4:67729045-67729064 | Msa0697670:intron | 35.0% | |
| ! | TATGAGTTGCCTCCAATTTT+AGG | - | chr4_4:67729117-67729136 | Msa0697670:intron | 35.0% |
| ! | ATGAGTTGCCTCCAATTTTA+GGG | - | chr4_4:67729118-67729137 | Msa0697670:intron | 35.0% |
| CACAGTAGTGATTATGCAAA+TGG | - | chr4_4:67729262-67729281 | Msa0697670:intron | 35.0% | |
| GTGATTATGCAAATGGTCTT+TGG | - | chr4_4:67729269-67729288 | Msa0697670:intron | 35.0% | |
| TTATCCCATAGCTATAGCAT+GGG | + | chr4_4:67729497-67729516 | None:intergenic | 35.0% | |
| ATAACACTGTTGCCATGTAA+CGG | - | chr4_4:67729513-67729532 | Msa0697670:intron | 35.0% | |
| GACATCCCTATTTGTATGAA+TGG | - | chr4_4:67729955-67729974 | Msa0697670:intron | 35.0% | |
| ATCCCTATTTGTATGAATGG+TGG | - | chr4_4:67729958-67729977 | Msa0697670:intron | 35.0% | |
| !! | TCGTAACACAGCTTTATTTC+AGG | + | chr4_4:67730004-67730023 | None:intergenic | 35.0% |
| !! | CGGATTTAACTTTTGCTGAT+TGG | - | chr4_4:67730107-67730126 | Msa0697670:intron | 35.0% |
| ! | TTTTGGCCATTGACATCATT+GGG | - | chr4_4:67730240-67730259 | Msa0697670:intron | 35.0% |
| !! | AAGTACAGGAAGCATCATTA+AGG | + | chr4_4:67730283-67730302 | None:intergenic | 35.0% |
| ! | ATAATTTGCCATTGCTGCAT+CGG | + | chr4_4:67730598-67730617 | None:intergenic | 35.0% |
| AAAGCAAAATTGGCATGTAG+AGG | - | chr4_4:67731100-67731119 | Msa0697670:intron | 35.0% | |
| ACATACTGTTTCATGTGTGT+GGG | - | chr4_4:67731127-67731146 | Msa0697670:intron | 35.0% | |
| ATTATCTGTGTTTCCTACGT+AGG | - | chr4_4:67731430-67731449 | Msa0697670:CDS | 35.0% | |
| CAGCATTTCGTAATCTTGTT+CGG | + | chr4_4:67731621-67731640 | None:intergenic | 35.0% | |
| AAGATTACGAAATGCTGTGA+TGG | - | chr4_4:67731624-67731643 | Msa0697670:intron | 35.0% | |
| CATTCATGCAATTGATGCAA+CGG | - | chr4_4:67731675-67731694 | Msa0697670:five_prime_UTR | 35.0% | |
| ! | GTTCTGGACTATACTCAGTA+GGG | - | chr4_4:67727501-67727520 | Msa0697670:three_prime_UTR | 40.0% |
| GAAGAGGTTCAATAACTAGG+AGG | + | chr4_4:67727843-67727862 | None:intergenic | 40.0% | |
| CTATGGTTAAGGAATTGAGG+AGG | + | chr4_4:67727895-67727914 | None:intergenic | 40.0% | |
| !!! | CGTTGATGATCATTTTGTGG+TGG | + | chr4_4:67727934-67727953 | None:intergenic | 40.0% |
| !!! | CCTCGTTGATGATCATTTTG+TGG | + | chr4_4:67727937-67727956 | None:intergenic | 40.0% |
| CCACAAAATGATCATCAACG+AGG | - | chr4_4:67727934-67727953 | Msa0697670:CDS | 40.0% | |
| ATGATCATCAACGAGGTTCA+AGG | - | chr4_4:67727941-67727960 | Msa0697670:CDS | 40.0% | |
| CTTGTGCTTCTGAGTATGTT+AGG | - | chr4_4:67728044-67728063 | Msa0697670:intron | 40.0% | |
| TGAGTATGTTAGGGTCTGTT+TGG | - | chr4_4:67728054-67728073 | Msa0697670:intron | 40.0% | |
| GTTTGTTCCCCTAAAATTGG+AGG | - | chr4_4:67728517-67728536 | Msa0697670:intron | 40.0% | |
| ! | TGAGTTGCCTCCAATTTTAG+GGG | + | chr4_4:67729119-67729138 | None:intergenic | 40.0% |
| GCTTAAAGAGACAATGCATG+TGG | + | chr4_4:67728602-67728621 | None:intergenic | 40.0% | |
| CAATAGTAGGTTGTGGCAAA+AGG | + | chr4_4:67728667-67728686 | None:intergenic | 40.0% | |
| ! | CTTTTGCCACAACCTACTAT+TGG | - | chr4_4:67728665-67728684 | Msa0697670:intron | 40.0% |
| !! | TAACAGTGTTGCTTGGAATG+AGG | + | chr4_4:67728771-67728790 | None:intergenic | 40.0% |
| CACCTAAATGCAAAGAGACA+AGG | - | chr4_4:67728933-67728952 | Msa0697670:intron | 40.0% | |
| CTCCTTGTCTCTTTGCATTT+AGG | + | chr4_4:67728938-67728957 | None:intergenic | 40.0% | |
| AGAGACAAGGAGATTGACAT+TGG | - | chr4_4:67728946-67728965 | Msa0697670:intron | 40.0% | |
| CTCTTTGTTCTTGACCACTT+CGG | + | chr4_4:67729005-67729024 | None:intergenic | 40.0% | |
| TTGGAGGCAACTCATAGTTA+TGG | + | chr4_4:67729113-67729132 | None:intergenic | 40.0% | |
| ! | TGAGTTGCCTCCAATTTTAG+GGG | - | chr4_4:67729119-67729138 | Msa0697670:intron | 40.0% |
| CAAGCTTCTTCCCCTAAAAT+TGG | + | chr4_4:67729132-67729151 | None:intergenic | 40.0% | |
| !! | CAATTTTAGGGGAAGAAGCT+TGG | - | chr4_4:67729130-67729149 | Msa0697670:intron | 40.0% |
| GTTATCCCATAGCTATAGCA+TGG | + | chr4_4:67729498-67729517 | None:intergenic | 40.0% | |
| TCAATTTGCATCCGTAGATG+GGG | + | chr4_4:67729937-67729956 | None:intergenic | 40.0% | |
| GTCAATTTGCATCCGTAGAT+GGG | + | chr4_4:67729938-67729957 | None:intergenic | 40.0% | |
| TGTCAATTTGCATCCGTAGA+TGG | + | chr4_4:67729939-67729958 | None:intergenic | 40.0% | |
| ATGTCAATGGCCAAAACTTG+AGG | + | chr4_4:67730236-67730255 | None:intergenic | 40.0% | |
| !! | GTTTTGGCCATTGACATCAT+TGG | - | chr4_4:67730239-67730258 | Msa0697670:intron | 40.0% |
| AGATGCATTCTGTTCAGGAA+AGG | + | chr4_4:67730456-67730475 | None:intergenic | 40.0% | |
| TTTCCTGAACAGAATGCATC+TGG | - | chr4_4:67730455-67730474 | Msa0697670:intron | 40.0% | |
| AGGCAAAAGCTCAACTAGTT+GGG | - | chr4_4:67730677-67730696 | Msa0697670:intron | 40.0% | |
| CGAGTAAGAAGTGACATCAA+TGG | - | chr4_4:67730709-67730728 | Msa0697670:intron | 40.0% | |
| GTAAGAAGTGACATCAATGG+AGG | - | chr4_4:67730712-67730731 | Msa0697670:intron | 40.0% | |
| !! | TCCTTTCTGAGGTAGTAGTT+AGG | - | chr4_4:67730845-67730864 | Msa0697670:intron | 40.0% |
| TCCTAACTACTACCTCAGAA+AGG | + | chr4_4:67730849-67730868 | None:intergenic | 40.0% | |
| CAGACTACATGCAGTATACT+TGG | + | chr4_4:67730907-67730926 | None:intergenic | 40.0% | |
| GCTAATACATGAACACCTCT+TGG | + | chr4_4:67730970-67730989 | None:intergenic | 40.0% | |
| CACATACTGTTTCATGTGTG+TGG | - | chr4_4:67731126-67731145 | Msa0697670:intron | 40.0% | |
| TATAGAATGTGTGTGCAGTG+TGG | - | chr4_4:67731204-67731223 | Msa0697670:CDS | 40.0% | |
| GATCGTTGATCCTTTCTTCT+TGG | + | chr4_4:67731313-67731332 | None:intergenic | 40.0% | |
| AGGATCAACGATCAAAGACA+AGG | - | chr4_4:67731320-67731339 | Msa0697670:intron | 40.0% | |
| !! | GGTTCTGGACTATACTCAGT+AGG | - | chr4_4:67727500-67727519 | Msa0697670:three_prime_UTR | 45.0% |
| ATGGATCTATCCCCCAAAGA+TGG | + | chr4_4:67727693-67727712 | None:intergenic | 45.0% | |
| TTAAGGAATTGAGGAGGTCC+TGG | + | chr4_4:67727889-67727908 | None:intergenic | 45.0% | |
| GCGCTATGGTTAAGGAATTG+AGG | + | chr4_4:67727898-67727917 | None:intergenic | 45.0% | |
| CAATTCCTTAACCATAGCGC+TGG | - | chr4_4:67727898-67727917 | Msa0697670:CDS | 45.0% | |
| ATTCTCCAGCGCTATGGTTA+AGG | + | chr4_4:67727906-67727925 | None:intergenic | 45.0% | |
| GATTGAATTCTCCAGCGCTA+TGG | + | chr4_4:67727912-67727931 | None:intergenic | 45.0% | |
| ATCATCAACGAGGTTCAAGG+CGG | - | chr4_4:67727944-67727963 | Msa0697670:CDS | 45.0% | |
| ! | GCTTTGCATGTTGCTTCAGT+TGG | - | chr4_4:67728413-67728432 | Msa0697670:CDS | 45.0% |
| CTAGATCCTTCGCCAATAGT+AGG | + | chr4_4:67728680-67728699 | None:intergenic | 45.0% | |
| AGTCTGAACGAGTTACCTGA+TGG | - | chr4_4:67728862-67728881 | Msa0697670:intron | 45.0% | |
| AACGAGTTACCTGATGGAGA+TGG | - | chr4_4:67728868-67728887 | Msa0697670:intron | 45.0% | |
| GTCTCATAACCATCTCCATC+AGG | + | chr4_4:67728880-67728899 | None:intergenic | 45.0% | |
| !! | GTTGCAGAGGCACTAAAAGA+AGG | - | chr4_4:67729067-67729086 | Msa0697670:intron | 45.0% |
| GCTTCTTCCCCTAAAATTGG+AGG | + | chr4_4:67729129-67729148 | None:intergenic | 45.0% | |
| TCACTACTGTGTGCTTCAGA+TGG | + | chr4_4:67729253-67729272 | None:intergenic | 45.0% | |
| AGGTTCCCATGCTATAGCTA+TGG | - | chr4_4:67729489-67729508 | Msa0697670:intron | 45.0% | |
| GGTTCCCATGCTATAGCTAT+GGG | - | chr4_4:67729490-67729509 | Msa0697670:intron | 45.0% | |
| GGAACATTGACACCGTTACA+TGG | + | chr4_4:67729528-67729547 | None:intergenic | 45.0% | |
| TGAGGAATGGGGCACAATTT+GGG | + | chr4_4:67729557-67729576 | None:intergenic | 45.0% | |
| AAGAAAATCTCCCCATGGTG+AGG | + | chr4_4:67729575-67729594 | None:intergenic | 45.0% | |
| TGGAGAAGAAAATCTCCCCA+TGG | + | chr4_4:67729580-67729599 | None:intergenic | 45.0% | |
| TCAATGGCCAAAACTTGAGG+AGG | + | chr4_4:67730233-67730252 | None:intergenic | 45.0% | |
| TGCATTCTGTTCAGGAAAGG+AGG | + | chr4_4:67730453-67730472 | None:intergenic | 45.0% | |
| AAGCCAGATGCATTCTGTTC+AGG | + | chr4_4:67730461-67730480 | None:intergenic | 45.0% | |
| GGTTAAATCCGATGCAGCAA+TGG | - | chr4_4:67730587-67730606 | Msa0697670:intron | 45.0% | |
| GAGGCAAAAGCTCAACTAGT+TGG | - | chr4_4:67730676-67730695 | Msa0697670:intron | 45.0% | |
| ! | AGCATCTTCAGCATTGGGAT+TGG | + | chr4_4:67730800-67730819 | None:intergenic | 45.0% |
| TCTGCAGCATCTTCAGCATT+GGG | + | chr4_4:67730805-67730824 | None:intergenic | 45.0% | |
| ! | AAGATGCTGCAGAGCTTTTG+AGG | - | chr4_4:67730812-67730831 | Msa0697670:intron | 45.0% |
| CTCCTATGCAAGTTTGCAGT+AGG | - | chr4_4:67730936-67730955 | Msa0697670:intron | 45.0% | |
| CACCTACTGCAAACTTGCAT+AGG | + | chr4_4:67730941-67730960 | None:intergenic | 45.0% | |
| CAGTAGGTGTATCTTCCAAG+AGG | - | chr4_4:67730952-67730971 | Msa0697670:intron | 45.0% | |
| ! | AACTTGCTCGCAGCATTATG+AGG | - | chr4_4:67731033-67731052 | Msa0697670:intron | 45.0% |
| TCCAACTCGCATGAGATGAT+TGG | + | chr4_4:67731368-67731387 | None:intergenic | 45.0% | |
| TCACAGCATGAAACCTACGT+AGG | + | chr4_4:67731446-67731465 | None:intergenic | 45.0% | |
| ! | AACACTGTCGCAAACTTGCT+GGG | + | chr4_4:67731476-67731495 | None:intergenic | 45.0% |
| !! | AAATAAATAAATAAATAGAA+TGG | + | chr4_4:67728009-67728028 | None:intergenic | 5.0% |
| GAACCACTTCGCAGTTCGTT+CGG | + | chr4_4:67727485-67727504 | None:intergenic | 50.0% | |
| AACGAACTGCGAAGTGGTTC+TGG | - | chr4_4:67727485-67727504 | Msa0697670:three_prime_UTR | 50.0% | |
| AAGTCGGAATCGTGGATGTG+AGG | + | chr4_4:67727615-67727634 | None:intergenic | 50.0% | |
| AGTTGTAGTCCGTGTCGTCT+TGG | + | chr4_4:67727644-67727663 | None:intergenic | 50.0% | |
| CAAAGATGGATGTGATGCGG+CGG | + | chr4_4:67727679-67727698 | None:intergenic | 50.0% | |
| GCCGCATCACATCCATCTTT+GGG | - | chr4_4:67727678-67727697 | Msa0697670:three_prime_UTR | 50.0% | |
| CCCCAAAGATGGATGTGATG+CGG | + | chr4_4:67727682-67727701 | None:intergenic | 50.0% | |
| CCGCATCACATCCATCTTTG+GGG | - | chr4_4:67727679-67727698 | Msa0697670:three_prime_UTR | 50.0% | |
| CGCATCACATCCATCTTTGG+GGG | - | chr4_4:67727680-67727699 | Msa0697670:three_prime_UTR | 50.0% | |
| GTCGAATGCAGAAGGAAGAC+CGG | + | chr4_4:67727748-67727767 | None:intergenic | 50.0% | |
| !! | GAGAAAGCGTCGAATGCAGA+AGG | + | chr4_4:67727756-67727775 | None:intergenic | 50.0% |
| GCATCATCGCAAGGAGAAGA+GGG | - | chr4_4:67727966-67727985 | Msa0697670:intron | 50.0% | |
| GAGAAGAGGGATTTACCCAC+TGG | - | chr4_4:67727979-67727998 | Msa0697670:intron | 50.0% | |
| !! | GTTGCAGAGGCACTAAGAGA+AGG | + | chr4_4:67728580-67728599 | None:intergenic | 50.0% |
| GACAATGCATGTGGTTGCAG+AGG | + | chr4_4:67728593-67728612 | None:intergenic | 50.0% | |
| CCTTCGCCAATAGTAGGTTG+TGG | + | chr4_4:67728674-67728693 | None:intergenic | 50.0% | |
| CCACAACCTACTATTGGCGA+AGG | - | chr4_4:67728671-67728690 | Msa0697670:intron | 50.0% | |
| GTCAATGCATGTGGTTGCAG+AGG | - | chr4_4:67729054-67729073 | Msa0697670:intron | 50.0% | |
| GTGAGGAATGGGGCACAATT+TGG | + | chr4_4:67729558-67729577 | None:intergenic | 50.0% | |
| ATCTCCCCATGGTGAGGAAT+GGG | + | chr4_4:67729569-67729588 | None:intergenic | 50.0% | |
| AATCTCCCCATGGTGAGGAA+TGG | + | chr4_4:67729570-67729589 | None:intergenic | 50.0% | |
| GGGACTTTCTTCCCCATCTA+CGG | - | chr4_4:67729923-67729942 | Msa0697670:intron | 50.0% | |
| ! | GTGACCACCTCCTCAAGTTT+TGG | - | chr4_4:67730223-67730242 | Msa0697670:intron | 50.0% |
| ATGGCCAAAACTTGAGGAGG+TGG | + | chr4_4:67730230-67730249 | None:intergenic | 50.0% | |
| TGTCGATGTGGGTGCATATC+TGG | - | chr4_4:67730639-67730658 | Msa0697670:intron | 50.0% | |
| ! | ACCGTGAGCACATCTGAAAC+AGG | - | chr4_4:67730754-67730773 | Msa0697670:intron | 50.0% |
| GCCTGTTTCAGATGTGCTCA+CGG | + | chr4_4:67730758-67730777 | None:intergenic | 50.0% | |
| ! | GCACATCTGAAACAGGCAAG+CGG | - | chr4_4:67730761-67730780 | Msa0697670:intron | 50.0% |
| ! | CACATCTGAAACAGGCAAGC+GGG | - | chr4_4:67730762-67730781 | Msa0697670:intron | 50.0% |
| !! | GCATTGGGATTGGTTGCAGT+TGG | + | chr4_4:67730790-67730809 | None:intergenic | 50.0% |
| CTCTGCAGCATCTTCAGCAT+TGG | + | chr4_4:67730806-67730825 | None:intergenic | 50.0% | |
| TTCTTCTTGGCCTCTGCACT+TGG | + | chr4_4:67731300-67731319 | None:intergenic | 50.0% | |
| AGTGCAGAGGCCAAGAAGAA+AGG | - | chr4_4:67731300-67731319 | Msa0697670:intron | 50.0% | |
| GCCAATCATCTCATGCGAGT+TGG | - | chr4_4:67731364-67731383 | Msa0697670:intron | 50.0% | |
| GTGAAACAGAGATGCAGCTG+AGG | - | chr4_4:67731391-67731410 | Msa0697670:intron | 50.0% | |
| CAACACTGTCGCAAACTTGC+TGG | + | chr4_4:67731477-67731496 | None:intergenic | 50.0% | |
| TGACCGAACGAACTGCGAAG+TGG | - | chr4_4:67727479-67727498 | Msa0697670:three_prime_UTR | 55.0% | |
| GTCGTCTTGGTCGTCGAAGT+CGG | + | chr4_4:67727631-67727650 | None:intergenic | 55.0% | |
| CTTCGACGACCAAGACGACA+CGG | - | chr4_4:67727632-67727651 | Msa0697670:three_prime_UTR | 55.0% | |
| CGCCGCATCACATCCATCTT+TGG | - | chr4_4:67727677-67727696 | Msa0697670:three_prime_UTR | 55.0% | |
| TGCAGAAGGAAGACCGGAAG+CGG | + | chr4_4:67727742-67727761 | None:intergenic | 55.0% | |
| TTCAAGGCGGCATCATCGCA+AGG | - | chr4_4:67727957-67727976 | Msa0697670:intron | 55.0% | |
| GGCATCATCGCAAGGAGAAG+AGG | - | chr4_4:67727965-67727984 | Msa0697670:intron | 55.0% | |
| GGAATGGGGCACAATTTGGG+CGG | + | chr4_4:67729554-67729573 | None:intergenic | 55.0% | |
| TTGTGCCCCATTCCTCACCA+TGG | - | chr4_4:67729560-67729579 | Msa0697670:intron | 55.0% | |
| TGTGCCCCATTCCTCACCAT+GGG | - | chr4_4:67729561-67729580 | Msa0697670:intron | 55.0% | |
| TCTCCCCATGGTGAGGAATG+GGG | + | chr4_4:67729568-67729587 | None:intergenic | 55.0% | |
| ACTGCGGATCTGCAAGGATG+GGG | + | chr4_4:67729604-67729623 | None:intergenic | 55.0% | |
| GACTGCGGATCTGCAAGGAT+GGG | + | chr4_4:67729605-67729624 | None:intergenic | 55.0% | |
| !! | TACTCTGGGACAGTTTCCCG+CGG | - | chr4_4:67729863-67729882 | Msa0697670:intron | 55.0% |
| GATGTGGGTGCATATCTGGC+AGG | - | chr4_4:67730643-67730662 | Msa0697670:intron | 55.0% | |
| TCAGATGTGCTCACGGTAGC+TGG | + | chr4_4:67730751-67730770 | None:intergenic | 55.0% | |
| CGTGCACTGGAGTAGGTCTT+GGG | + | chr4_4:67731234-67731253 | None:intergenic | 55.0% | |
| ACGTGCACTGGAGTAGGTCT+TGG | + | chr4_4:67731235-67731254 | None:intergenic | 55.0% | |
| AAGACCTACTCCAGTGCACG+TGG | - | chr4_4:67731234-67731253 | Msa0697670:CDS | 55.0% | |
| CATTCCACGTGCACTGGAGT+AGG | + | chr4_4:67731241-67731260 | None:intergenic | 55.0% | |
| CTACTCCAGTGCACGTGGAA+TGG | - | chr4_4:67731239-67731258 | Msa0697670:CDS | 55.0% | |
| GGAATGGTCTGCCCTGTATG+TGG | - | chr4_4:67731255-67731274 | Msa0697670:CDS | 55.0% | |
| GAGGGCGATCACCACATACA+GGG | + | chr4_4:67731269-67731288 | None:intergenic | 55.0% | |
| TTGGCCTCTGCACTTGGATC+CGG | + | chr4_4:67731294-67731313 | None:intergenic | 55.0% | |
| GGTCGTCGAAGTCGGAATCG+TGG | + | chr4_4:67727623-67727642 | None:intergenic | 60.0% | |
| ATGTGATGCGGCGGAGGGTT+CGG | + | chr4_4:67727670-67727689 | None:intergenic | 60.0% | |
| GATGGATGTGATGCGGCGGA+GGG | + | chr4_4:67727675-67727694 | None:intergenic | 60.0% | |
| AGATGGATGTGATGCGGCGG+AGG | + | chr4_4:67727676-67727695 | None:intergenic | 60.0% | |
| ! | TGGGGGATGGTGGTCGAAGA+TGG | + | chr4_4:67727712-67727731 | None:intergenic | 60.0% |
| AAGCGGAAGGAAGTGGGGGA+TGG | + | chr4_4:67727725-67727744 | None:intergenic | 60.0% | |
| ACCGGAAGCGGAAGGAAGTG+GGG | + | chr4_4:67727730-67727749 | None:intergenic | 60.0% | |
| GACCGGAAGCGGAAGGAAGT+GGG | + | chr4_4:67727731-67727750 | None:intergenic | 60.0% | |
| AGACCGGAAGCGGAAGGAAG+TGG | + | chr4_4:67727732-67727751 | None:intergenic | 60.0% | |
| GAAGGAAGACCGGAAGCGGA+AGG | + | chr4_4:67727738-67727757 | None:intergenic | 60.0% | |
| TGGGGCACAATTTGGGCGGT+GGG | + | chr4_4:67729550-67729569 | None:intergenic | 60.0% | |
| ATGGGGCACAATTTGGGCGG+TGG | + | chr4_4:67729551-67729570 | None:intergenic | 60.0% | |
| GTGCCCCATTCCTCACCATG+GGG | - | chr4_4:67729562-67729581 | Msa0697670:intron | 60.0% | |
| CGGATCTGCAAGGATGGGGA+TGG | + | chr4_4:67729600-67729619 | None:intergenic | 60.0% | |
| GGACTGCGGATCTGCAAGGA+TGG | + | chr4_4:67729606-67729625 | None:intergenic | 60.0% | |
| ACAGGGACTGCGGATCTGCA+AGG | + | chr4_4:67729610-67729629 | None:intergenic | 60.0% | |
| TTGCAGATCCGCAGTCCCTG+TGG | - | chr4_4:67729609-67729628 | Msa0697670:intron | 60.0% | |
| CATGCTGATGGGGTCCCCAA+AGG | + | chr4_4:67729635-67729654 | None:intergenic | 60.0% | |
| !! | ACTCTGGGACAGTTTCCCGC+GGG | - | chr4_4:67729864-67729883 | Msa0697670:intron | 60.0% |
| CGTGAGGCTAGTACGAGGAC+GGG | + | chr4_4:67729903-67729922 | None:intergenic | 60.0% | |
| CCGTGAGGCTAGTACGAGGA+CGG | + | chr4_4:67729904-67729923 | None:intergenic | 60.0% | |
| ! | CCGTCCTCGTACTAGCCTCA+CGG | - | chr4_4:67729901-67729920 | Msa0697670:intron | 60.0% |
| ! | CGTCCTCGTACTAGCCTCAC+GGG | - | chr4_4:67729902-67729921 | Msa0697670:intron | 60.0% |
| ! | GTCCTCGTACTAGCCTCACG+GGG | - | chr4_4:67729903-67729922 | Msa0697670:intron | 60.0% |
| TGGGGAAGAAAGTCCCCGTG+AGG | + | chr4_4:67729919-67729938 | None:intergenic | 60.0% | |
| GGGTGCATATCTGGCAGGTG+CGG | - | chr4_4:67730648-67730667 | Msa0697670:intron | 60.0% | |
| TCTGGCAGGTGCGGTAGTAG+AGG | - | chr4_4:67730657-67730676 | Msa0697670:intron | 60.0% | |
| !! | CGGTAGCTGGTGTTGGTGGT+TGG | + | chr4_4:67730738-67730757 | None:intergenic | 60.0% |
| ! | CTCACGGTAGCTGGTGTTGG+TGG | + | chr4_4:67730742-67730761 | None:intergenic | 60.0% |
| GTGCTCACGGTAGCTGGTGT+TGG | + | chr4_4:67730745-67730764 | None:intergenic | 60.0% | |
| GCAGACCATTCCACGTGCAC+TGG | + | chr4_4:67731247-67731266 | None:intergenic | 60.0% | |
| GGAGGGCGATCACCACATAC+AGG | + | chr4_4:67731270-67731289 | None:intergenic | 60.0% | |
| CGGAAGGAAGTGGGGGATGG+TGG | + | chr4_4:67727722-67727741 | None:intergenic | 65.0% | |
| CCGGAAGCGGAAGGAAGTGG+GGG | + | chr4_4:67727729-67727748 | None:intergenic | 65.0% | |
| CCCCCACTTCCTTCCGCTTC+CGG | - | chr4_4:67727726-67727745 | Msa0697670:three_prime_UTR | 65.0% | |
| GGGGCACAATTTGGGCGGTG+GGG | + | chr4_4:67729549-67729568 | None:intergenic | 65.0% | |
| TCCGCAGTCCCTGTGGCCTT+TGG | - | chr4_4:67729616-67729635 | Msa0697670:intron | 65.0% | |
| CCCAAAGGCCACAGGGACTG+CGG | + | chr4_4:67729620-67729639 | None:intergenic | 65.0% | |
| CCGCAGTCCCTGTGGCCTTT+GGG | - | chr4_4:67729617-67729636 | Msa0697670:intron | 65.0% | |
| CGCAGTCCCTGTGGCCTTTG+GGG | - | chr4_4:67729618-67729637 | Msa0697670:intron | 65.0% | |
| TGGGGTCCCCAAAGGCCACA+GGG | + | chr4_4:67729627-67729646 | None:intergenic | 65.0% | |
| ATGGGGTCCCCAAAGGCCAC+AGG | + | chr4_4:67729628-67729647 | None:intergenic | 65.0% | |
| !! | CTCTGGGACAGTTTCCCGCG+GGG | - | chr4_4:67729865-67729884 | Msa0697670:intron | 65.0% |
| GTCCCCGTGAGGCTAGTACG+AGG | + | chr4_4:67729908-67729927 | None:intergenic | 65.0% | |
| ATGTGGTGATCGCCCTCCGC+CGG | - | chr4_4:67731272-67731291 | Msa0697670:CDS | 65.0% | |
| CTGCACTTGGATCCGGCGGA+GGG | + | chr4_4:67731287-67731306 | None:intergenic | 65.0% | |
| TCTGCACTTGGATCCGGCGG+AGG | + | chr4_4:67731288-67731307 | None:intergenic | 65.0% | |
| TCCGCCGGATCCAAGTGCAG+AGG | - | chr4_4:67731287-67731306 | Msa0697670:intron | 65.0% | |
| GCCTCTGCACTTGGATCCGG+CGG | + | chr4_4:67731291-67731310 | None:intergenic | 65.0% | |
| TGATGCGGCGGAGGGTTCGG+CGG | + | chr4_4:67727667-67727686 | None:intergenic | 70.0% | |
| TGGGACAGTTTCCCGCGGGG+CGG | - | chr4_4:67729868-67729887 | Msa0697670:intron | 70.0% | |
| GGATTATACGCCCGCCCCGC+GGG | + | chr4_4:67729882-67729901 | None:intergenic | 70.0% | |
| GGGATTATACGCCCGCCCCG+CGG | + | chr4_4:67729883-67729902 | None:intergenic | 70.0% | |
| GGGACAGTTTCCCGCGGGGC+GGG | - | chr4_4:67729869-67729888 | Msa0697670:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 67727470 | 67731713 | 67727470 | ID=Msa0697670;Name=Msa0697670 |
| chr4_4 | mRNA | 67727470 | 67731713 | 67727470 | ID=Msa0697670-mRNA-1;Parent=Msa0697670;Name=Msa0697670-mRNA-1;_AED=0.20;_eAED=0.20;_QI=56|1|1|1|0.75|0.6|5|285|245 |
| chr4_4 | exon | 67727470 | 67727974 | 67727470 | ID=Msa0697670-mRNA-1:exon:20063;Parent=Msa0697670-mRNA-1 |
| chr4_4 | exon | 67728350 | 67728518 | 67728350 | ID=Msa0697670-mRNA-1:exon:20062;Parent=Msa0697670-mRNA-1 |
| chr4_4 | exon | 67731183 | 67731300 | 67731183 | ID=Msa0697670-mRNA-1:exon:20061;Parent=Msa0697670-mRNA-1 |
| chr4_4 | exon | 67731404 | 67731642 | 67731404 | ID=Msa0697670-mRNA-1:exon:20060;Parent=Msa0697670-mRNA-1 |
| chr4_4 | exon | 67731666 | 67731713 | 67731666 | ID=Msa0697670-mRNA-1:exon:20059;Parent=Msa0697670-mRNA-1 |
| chr4_4 | five_prime_UTR | 67731666 | 67731713 | 67731666 | ID=Msa0697670-mRNA-1:five_prime_utr;Parent=Msa0697670-mRNA-1 |
| chr4_4 | five_prime_UTR | 67731635 | 67731642 | 67731635 | ID=Msa0697670-mRNA-1:five_prime_utr;Parent=Msa0697670-mRNA-1 |
| chr4_4 | CDS | 67731404 | 67731634 | 67731404 | ID=Msa0697670-mRNA-1:cds;Parent=Msa0697670-mRNA-1 |
| chr4_4 | CDS | 67731183 | 67731300 | 67731183 | ID=Msa0697670-mRNA-1:cds;Parent=Msa0697670-mRNA-1 |
| chr4_4 | CDS | 67728350 | 67728518 | 67728350 | ID=Msa0697670-mRNA-1:cds;Parent=Msa0697670-mRNA-1 |
| chr4_4 | CDS | 67727755 | 67727974 | 67727755 | ID=Msa0697670-mRNA-1:cds;Parent=Msa0697670-mRNA-1 |
| chr4_4 | three_prime_UTR | 67727470 | 67727754 | 67727470 | ID=Msa0697670-mRNA-1:three_prime_utr;Parent=Msa0697670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
