AlfalfaGEDB | Msa0342360

M. sativa cultivar zhongmu-4 / Msa0342360

KEGG: -
GO: -
PFAM: PF14966.9

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0342360	XP_013458796.1	95.610	205	8	1	1	205	1	204	3.52e-140	399

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002490	Msa0342360	0.806848	6.740247e-50	-8.615850e-47
Msa0004860	Msa0342360	0.804846	1.775398e-49	-8.615850e-47
Msa0004920	Msa0342360	0.814665	1.372231e-51	-8.615850e-47
Msa0015300	Msa0342360	0.837508	4.987138e-57	-8.615850e-47
Msa0017510	Msa0342360	0.813889	2.036615e-51	-8.615850e-47
Msa0040450	Msa0342360	0.801050	1.081119e-48	-8.615850e-47
Msa0044020	Msa0342360	0.804606	1.993116e-49	-8.615850e-47
Msa0046750	Msa0342360	0.803544	3.314607e-49	-8.615850e-47
Msa0051770	Msa0342360	0.825206	5.319105e-54	-8.615850e-47
Msa0053780	Msa0342360	0.810352	1.202693e-50	-8.615850e-47
Msa0064350	Msa0342360	0.807949	3.936361e-50	-8.615850e-47
Msa0067620	Msa0342360	0.800742	1.249326e-48	-8.615850e-47
Msa0076000	Msa0342360	0.837830	4.123244e-57	-8.615850e-47
Msa0077610	Msa0342360	0.828300	9.707709e-55	-8.615850e-47
Msa0077670	Msa0342360	0.812395	4.332057e-51	-8.615850e-47
Msa0094120	Msa0342360	0.810814	9.561099e-51	-8.615850e-47
Msa0110970	Msa0342360	0.812692	3.730251e-51	-8.615850e-47
Msa0124340	Msa0342360	0.812218	4.734598e-51	-8.615850e-47
Msa0128020	Msa0342360	0.802134	6.481094e-49	-8.615850e-47
Msa0140780	Msa0342360	0.814821	1.267120e-51	-8.615850e-47
Msa0157290	Msa0342360	0.813509	2.468652e-51	-8.615850e-47
Msa0157310	Msa0342360	0.817934	2.548483e-52	-8.615850e-47
Msa0173990	Msa0342360	0.805937	1.048905e-49	-8.615850e-47
Msa0184020	Msa0342360	0.816845	4.482981e-52	-8.615850e-47
Msa0184960	Msa0342360	0.987797	1.422985e-171	-8.615850e-47
Msa0186890	Msa0342360	0.824139	9.488306e-54	-8.615850e-47
Msa0188630	Msa0342360	0.803355	3.627321e-49	-8.615850e-47
Msa0189290	Msa0342360	0.814342	1.617810e-51	-8.615850e-47
Msa0191050	Msa0342360	0.828719	7.689536e-55	-8.615850e-47
Msa0193120	Msa0342360	0.811232	7.759380e-51	-8.615850e-47
Msa0205850	Msa0342360	0.820385	7.053030e-53	-8.615850e-47
Msa0220580	Msa0342360	0.817736	2.824383e-52	-8.615850e-47
Msa0225740	Msa0342360	0.814980	1.168538e-51	-8.615850e-47
Msa0231650	Msa0342360	0.824476	7.908940e-54	-8.615850e-47
Msa0233350	Msa0342360	0.832490	9.178067e-56	-8.615850e-47
Msa0242230	Msa0342360	0.803734	3.026673e-49	-8.615850e-47
Msa0243100	Msa0342360	0.821496	3.914125e-53	-8.615850e-47
Msa0243710	Msa0342360	0.803361	3.616443e-49	-8.615850e-47
Msa0246430	Msa0342360	0.800929	1.144488e-48	-8.615850e-47
Msa0248980	Msa0342360	0.803540	3.320593e-49	-8.615850e-47
Msa0258760	Msa0342360	0.804385	2.215979e-49	-8.615850e-47
Msa0265380	Msa0342360	0.803921	2.766917e-49	-8.615850e-47
Msa0270100	Msa0342360	0.821312	4.317065e-53	-8.615850e-47
Msa0275600	Msa0342360	0.802312	5.955964e-49	-8.615850e-47
Msa0282250	Msa0342360	0.828617	8.138812e-55	-8.615850e-47
Msa0287650	Msa0342360	0.837125	6.251289e-57	-8.615850e-47
Msa0298700	Msa0342360	0.815468	9.102408e-52	-8.615850e-47
Msa0311700	Msa0342360	0.807377	5.206427e-50	-8.615850e-47
Msa0323620	Msa0342360	0.806967	6.358654e-50	-8.615850e-47
Msa0342360	Msa0347360	0.807650	4.557497e-50	-8.615850e-47
Msa0342360	Msa0355270	0.827898	1.213232e-54	-8.615850e-47
Msa0342360	Msa0366240	0.813270	2.786532e-51	-8.615850e-47
Msa0342360	Msa0372660	0.827821	1.266102e-54	-8.615850e-47
Msa0342360	Msa0372670	0.815770	7.798332e-52	-8.615850e-47
Msa0342360	Msa0379640	0.801224	9.961244e-49	-8.615850e-47
Msa0342360	Msa0380040	0.812981	3.225100e-51	-8.615850e-47
Msa0342360	Msa0380740	0.802370	5.794123e-49	-8.615850e-47
Msa0342360	Msa0380890	0.804459	2.138259e-49	-8.615850e-47
Msa0342360	Msa0389340	0.803167	3.966067e-49	-8.615850e-47
Msa0342360	Msa0392940	0.804372	2.229317e-49	-8.615850e-47
Msa0342360	Msa0398710	0.804996	1.652069e-49	-8.615850e-47
Msa0342360	Msa0402330	0.825179	5.399036e-54	-8.615850e-47
Msa0342360	Msa0419820	0.814267	1.680483e-51	-8.615850e-47
Msa0342360	Msa0425010	0.810047	1.399335e-50	-8.615850e-47
Msa0342360	Msa0425220	0.803474	3.426048e-49	-8.615850e-47
Msa0342360	Msa0430620	0.808026	3.790936e-50	-8.615850e-47
Msa0342360	Msa0430790	0.802765	4.802564e-49	-8.615850e-47
Msa0342360	Msa0432770	0.818493	1.904544e-52	-8.615850e-47
Msa0342360	Msa0436050	0.802455	5.563867e-49	-8.615850e-47
Msa0342360	Msa0442670	0.967404	3.130745e-127	-8.615850e-47
Msa0342360	Msa0446020	0.810781	9.719286e-51	-8.615850e-47
Msa0342360	Msa0480000	0.809470	1.862133e-50	-8.615850e-47
Msa0342360	Msa0483860	0.804614	1.985145e-49	-8.615850e-47
Msa0342360	Msa0484780	0.811126	8.182670e-51	-8.615850e-47
Msa0342360	Msa0488400	0.966972	1.219561e-126	-8.615850e-47
Msa0342360	Msa0500360	0.813695	2.246824e-51	-8.615850e-47
Msa0342360	Msa0509390	0.801058	1.077129e-48	-8.615850e-47
Msa0342360	Msa0515010	0.812182	4.821233e-51	-8.615850e-47
Msa0342360	Msa0516320	0.802278	6.052756e-49	-8.615850e-47
Msa0342360	Msa0541860	0.822929	1.820460e-53	-8.615850e-47
Msa0342360	Msa0547360	0.814787	1.289221e-51	-8.615850e-47
Msa0342360	Msa0597330	0.813026	3.152805e-51	-8.615850e-47
Msa0342360	Msa0603540	0.807583	4.708714e-50	-8.615850e-47
Msa0342360	Msa0610430	0.808650	2.790402e-50	-8.615850e-47
Msa0342360	Msa0616020	0.834715	2.553305e-56	-8.615850e-47
Msa0342360	Msa0619070	0.801852	7.403262e-49	-8.615850e-47
Msa0342360	Msa0621490	0.802716	4.915999e-49	-8.615850e-47
Msa0342360	Msa0621590	0.808968	2.386017e-50	-8.615850e-47
Msa0342360	Msa0623700	0.829941	3.884236e-55	-8.615850e-47
Msa0342360	Msa0633840	0.807700	4.446183e-50	-8.615850e-47
Msa0342360	Msa0638070	0.816306	5.917678e-52	-8.615850e-47
Msa0342360	Msa0638320	0.808604	2.854124e-50	-8.615850e-47
Msa0342360	Msa0643220	0.828195	1.029022e-54	-8.615850e-47
Msa0342360	Msa0657970	0.811410	7.100152e-51	-8.615850e-47
Msa0342360	Msa0663920	0.802884	4.539674e-49	-8.615850e-47
Msa0342360	Msa0677270	0.802127	6.502046e-49	-8.615850e-47
Msa0342360	Msa0682900	0.832001	1.212268e-55	-8.615850e-47
Msa0342360	Msa0697670	0.801015	1.099181e-48	-8.615850e-47
Msa0342360	Msa0703230	0.824680	7.077557e-54	-8.615850e-47
Msa0342360	Msa0705870	0.809733	1.635405e-50	-8.615850e-47
Msa0342360	Msa0708520	0.817484	3.219578e-52	-8.615850e-47
Msa0342360	Msa0709500	0.805405	1.356246e-49	-8.615850e-47
Msa0342360	Msa0720820	0.808042	3.761743e-50	-8.615850e-47
Msa0342360	Msa0724830	0.821407	4.104691e-53	-8.615850e-47
Msa0342360	Msa0743260	0.805553	1.262571e-49	-8.615850e-47
Msa0342360	Msa0744040	0.803707	3.065865e-49	-8.615850e-47
Msa0342360	Msa0750880	0.810454	1.143379e-50	-8.615850e-47
Msa0342360	Msa0760380	0.814370	1.594863e-51	-8.615850e-47
Msa0342360	Msa0761940	0.814160	1.774430e-51	-8.615850e-47
Msa0342360	Msa0763020	0.801891	7.267932e-49	-8.615850e-47
Msa0342360	Msa0763070	0.809175	2.154686e-50	-8.615850e-47
Msa0342360	Msa0765380	0.802071	6.675563e-49	-8.615850e-47
Msa0342360	Msa0770200	0.806403	8.365765e-50	-8.615850e-47
Msa0342360	Msa0790510	0.818342	2.060548e-52	-8.615850e-47
Msa0342360	Msa0790850	0.805832	1.103398e-49	-8.615850e-47
Msa0342360	Msa0801760	0.811373	7.232241e-51	-8.615850e-47
Msa0342360	Msa0803890	0.812386	4.351924e-51	-8.615850e-47
Msa0342360	Msa0824680	0.826673	2.383888e-54	-8.615850e-47
Msa0342360	Msa0841940	0.804076	2.569089e-49	-8.615850e-47
Msa0342360	Msa0850960	0.803470	3.433035e-49	-8.615850e-47
Msa0342360	Msa0869100	0.805369	1.380375e-49	-8.615850e-47
Msa0342360	Msa0874500	0.804252	2.362295e-49	-8.615850e-47
Msa0342360	Msa0876200	0.834320	3.208191e-56	-8.615850e-47
Msa0342360	Msa0878500	0.820206	7.753791e-53	-8.615850e-47
Msa0342360	Msa0880140	0.813001	3.192941e-51	-8.615850e-47
Msa0342360	Msa0888530	0.811576	6.534095e-51	-8.615850e-47
Msa0342360	Msa0894390	0.805350	1.392536e-49	-8.615850e-47
Msa0342360	Msa0920870	0.820053	8.401884e-53	-8.615850e-47
Msa0342360	Msa0923330	0.805305	1.423465e-49	-8.615850e-47
Msa0342360	Msa0935670	0.802239	6.165462e-49	-8.615850e-47
Msa0342360	Msa0944190	0.829283	5.614721e-55	-8.615850e-47
Msa0342360	Msa0945970	0.809169	2.160884e-50	-8.615850e-47
Msa0342360	Msa0958970	0.807260	5.512957e-50	-8.615850e-47
Msa0342360	Msa0970030	0.807878	4.076407e-50	-8.615850e-47
Msa0342360	Msa1003750	0.815117	1.089351e-51	-8.615850e-47
Msa0342360	Msa1013400	0.800059	1.721523e-48	-8.615850e-47
Msa0342360	Msa1023400	0.825904	3.635367e-54	-8.615850e-47
Msa0342360	Msa1040400	0.803993	2.673406e-49	-8.615850e-47
Msa0342360	Msa1040890	0.817954	2.521907e-52	-8.615850e-47
Msa0342360	Msa1046020	0.812172	4.845696e-51	-8.615850e-47
Msa0342360	Msa1046060	0.804045	2.608175e-49	-8.615850e-47
Msa0342360	Msa1082500	0.821813	3.307749e-53	-8.615850e-47
Msa0342360	Msa1083150	0.805239	1.469266e-49	-8.615850e-47
Msa0342360	Msa1097800	0.824516	7.738542e-54	-8.615850e-47
Msa0342360	Msa1111110	0.806280	8.879669e-50	-8.615850e-47
Msa0342360	Msa1125760	0.816351	5.784146e-52	-8.615850e-47
Msa0342360	Msa1127890	0.820565	6.413675e-53	-8.615850e-47
Msa0342360	Msa1131220	0.812042	5.173634e-51	-8.615850e-47
Msa0342360	Msa1147900	0.810241	1.271387e-50	-8.615850e-47
Msa0342360	Msa1151910	0.805192	1.502899e-49	-8.615850e-47
Msa0342360	Msa1165870	0.808806	2.584749e-50	-8.615850e-47
Msa0342360	Msa1171360	0.803097	4.102283e-49	-8.615850e-47
Msa0342360	Msa1178610	0.807813	4.207615e-50	-8.615850e-47
Msa0342360	Msa1187840	0.829809	4.182185e-55	-8.615850e-47
Msa0342360	Msa1190930	0.814501	1.492345e-51	-8.615850e-47
Msa0342360	Msa1199220	0.812594	3.919649e-51	-8.615850e-47
Msa0342360	Msa1199560	0.845174	4.788081e-59	-8.615850e-47
Msa0342360	Msa1203250	0.817098	3.932818e-52	-8.615850e-47
Msa0342360	Msa1214890	0.807507	4.886783e-50	-8.615850e-47
Msa0342360	Msa1218600	0.824742	6.846635e-54	-8.615850e-47
Msa0342360	Msa1222970	0.801219	9.984510e-49	-8.615850e-47
Msa0342360	Msa1233500	0.817632	2.981100e-52	-8.615850e-47
Msa0342360	Msa1233890	0.813811	2.118790e-51	-8.615850e-47
Msa0342360	Msa1242230	0.808756	2.648235e-50	-8.615850e-47
Msa0342360	Msa1242240	0.805204	1.494167e-49	-8.615850e-47
Msa0342360	Msa1251730	0.818898	1.541630e-52	-8.615850e-47
Msa0342360	Msa1269300	0.804081	2.562950e-49	-8.615850e-47
Msa0342360	Msa1270610	0.810326	1.218758e-50	-8.615850e-47
Msa0342360	Msa1270680	0.801344	9.411123e-49	-8.615850e-47
Msa0342360	Msa1271280	0.804554	2.043090e-49	-8.615850e-47
Msa0342360	Msa1275540	0.830069	3.613932e-55	-8.615850e-47
Msa0342360	Msa1279210	0.814854	1.246492e-51	-8.615850e-47
Msa0342360	Msa1281180	0.820489	6.676828e-53	-8.615850e-47
Msa0342360	Msa1283170	0.806819	6.833472e-50	-8.615850e-47
Msa0342360	Msa1284260	0.802024	6.826906e-49	-8.615850e-47
Msa0342360	Msa1288420	0.807148	5.822513e-50	-8.615850e-47
Msa0342360	Msa1294480	0.810843	9.420085e-51	-8.615850e-47
Msa0342360	Msa1300490	0.807367	5.232101e-50	-8.615850e-47
Msa0342360	Msa1304820	0.804503	2.093484e-49	-8.615850e-47
Msa0342360	Msa1314340	0.803320	3.688305e-49	-8.615850e-47
Msa0342360	Msa1316780	0.851753	7.225455e-61	-8.615850e-47
Msa0342360	Msa1316830	0.842789	2.086014e-58	-8.615850e-47
Msa0342360	Msa1320740	0.806983	6.310016e-50	-8.615850e-47
Msa0342360	Msa1322860	0.803243	3.825921e-49	-8.615850e-47
Msa0342360	Msa1328700	0.837448	5.166700e-57	-8.615850e-47
Msa0342360	Msa1331910	0.805380	1.372845e-49	-8.615850e-47
Msa0342360	Msa1336710	0.822712	2.046033e-53	-8.615850e-47
Msa0342360	Msa1340020	0.822143	2.772912e-53	-8.615850e-47
Msa0342360	Msa1340650	0.826922	2.079637e-54	-8.615850e-47
Msa0342360	Msa1343070	0.816723	4.773704e-52	-8.615850e-47
Msa0342360	Msa1351730	0.805584	1.244189e-49	-8.615850e-47
Msa0342360	Msa1353060	0.813330	2.703891e-51	-8.615850e-47
Msa0342360	Msa1356440	0.805915	1.059819e-49	-8.615850e-47
Msa0342360	Msa1371430	0.822040	2.930665e-53	-8.615850e-47
Msa0342360	Msa1385670	0.812262	4.632717e-51	-8.615850e-47
Msa0342360	Msa1397810	0.831394	1.711419e-55	-8.615850e-47
Msa0342360	Msa1400190	0.802034	6.794223e-49	-8.615850e-47
Msa0342360	Msa1404730	0.806853	6.721414e-50	-8.615850e-47
Msa0342360	Msa1415640	0.818552	1.846588e-52	-8.615850e-47
Msa0342360	Msa1424450	0.808269	3.365752e-50	-8.615850e-47
Msa0342360	Msa1440000	0.802257	6.111581e-49	-8.615850e-47
Msa0342360	Msa1449820	0.804400	2.200017e-49	-8.615850e-47
Msa0342360	Msa1457910	0.824837	6.500689e-54	-8.615850e-47
Msa0342360	Msa1461280	0.819797	9.618532e-53	-8.615850e-47
Msa0342360	Msa1466300	0.827602	1.428532e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0342360	MtrunA17_Chr3g0078281	95.610	205	8	1	1	205	1	204	3.24e-144	399

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0342360	AT5G04910.1	69.780	182	55	0	24	205	41	222	1.20e-83	247

Find 58 sgRNAs with CRISPR-Local

Find 323 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGGAAGAAGATTTGGAATT+TGG	0.083112	2_4:-64647566	Msa0342360:CDS
GATTGTAATGGATGGTTATT+TGG	0.208831	2_4:-64643187	Msa0342360:three_prime_UTR
ACAAGTAATTTATATTAAAA+TGG	0.239680	2_4:-64643264	Msa0342360:three_prime_UTR
ACGAAGCAAAACAGCGATTT+TGG	0.256682	2_4:+64647493	None:intergenic
CGGAGTGATGGAAGAAGATT+TGG	0.282022	2_4:-64647573	Msa0342360:exon
AAGGAGATCACTGAAGCTTC+TGG	0.308239	2_4:-64643538	Msa0342360:CDS
CATGACTTCTGGAGGGGAAT+TGG	0.328109	2_4:-64646232	Msa0342360:CDS
ACACAAGAAGGGTGCCGTTT+TGG	0.333658	2_4:-64647643	Msa0342360:five_prime_UTR
TGGAAGAAGATTTGGAATTT+GGG	0.347258	2_4:-64647565	Msa0342360:CDS
TGCTCAGTGCTAACAGATAT+TGG	0.350928	2_4:-64643352	Msa0342360:three_prime_UTR
AGCGAGTGAGTTGAATAAAA+AGG	0.367800	2_4:-64647604	Msa0342360:five_prime_UTR
CCTGTTCTTGAACAGCTCTA+AGG	0.384342	2_4:+64645977	None:intergenic
AGATCAATGCGGCTATAGTC+AGG	0.401278	2_4:+64646009	None:intergenic
ACTTTATTACTTGATTGTAA+TGG	0.416431	2_4:-64643199	Msa0342360:three_prime_UTR
TTGTAAATTTGCAATTATCA+TGG	0.426145	2_4:+64643590	None:intergenic
CCTTAGAGCTGTTCAAGAAC+AGG	0.429245	2_4:-64645977	Msa0342360:CDS
GTTTCTTCCCTTTGCCAAAA+CGG	0.431987	2_4:+64647629	None:intergenic
AGATTTGGAATTTGGGAAGA+AGG	0.436083	2_4:-64647558	Msa0342360:CDS
AAGCTTATTCCAAACTCAAA+AGG	0.441845	2_4:-64647439	Msa0342360:intron
GCATGAGTGTGTCCATGTTA+AGG	0.447012	2_4:-64643557	Msa0342360:CDS
CCGCTTTCTTTAACAGCTGA+AGG	0.459259	2_4:+64643638	None:intergenic
ATCATGGCTTACCAGTCGTT+CGG	0.468178	2_4:+64643606	None:intergenic
GAAACAACGACTCCATTTCA+CGG	0.488812	2_4:+64646037	None:intergenic
TGAAGCTATTAGAGGTGTCC+AGG	0.497762	2_4:-64643470	Msa0342360:CDS
TTTCTTTATGATAAATGAGT+AGG	0.497898	2_4:-64643121	Msa0342360:three_prime_UTR
TGGACACACTCATGCTCTGT+TGG	0.499630	2_4:+64643565	None:intergenic
TTTAGCATAGGTCCGTGAAA+TGG	0.500168	2_4:-64646049	Msa0342360:intron
AGGAGATCACTGAAGCTTCT+GGG	0.504065	2_4:-64643537	Msa0342360:CDS
TGCAGAAATGAAACTACGCT+TGG	0.509383	2_4:+64643021	None:intergenic
GGAAAAGCAGAAACTACATC+TGG	0.524115	2_4:-64645956	Msa0342360:intron
CAGTGCTAACAGATATTGGC+AGG	0.530419	2_4:-64643348	Msa0342360:three_prime_UTR
AATTTACAAACGACACAAGA+AGG	0.535507	2_4:-64647655	Msa0342360:five_prime_UTR
TGATGACCATGACAGCATCC+TGG	0.539396	2_4:+64643452	None:intergenic
GGGTCGGCCATCCGAACGAC+TGG	0.546391	2_4:-64643617	Msa0342360:CDS
TATTACTTGATTGTAATGGA+TGG	0.548701	2_4:-64643195	Msa0342360:three_prime_UTR
TGGCAGGTGTTTACAACCAG+TGG	0.551061	2_4:-64643332	Msa0342360:three_prime_UTR
TGTGCCTATGTACATTCCAC+TGG	0.555149	2_4:+64643316	None:intergenic
AGGTGTCCAGGATGCTGTCA+TGG	0.560024	2_4:-64643458	Msa0342360:CDS
CTTCAGCTGTTAAAGAAAGC+GGG	0.562359	2_4:-64643637	Msa0342360:CDS
CTTCAGTGATCTCCTTAACA+TGG	0.563538	2_4:+64643545	None:intergenic
GCTGTGAATGAAGCTATTAG+AGG	0.564398	2_4:-64643478	Msa0342360:CDS
GCTTATCAGCAGCTTTGCAG+TGG	0.569257	2_4:-64646210	Msa0342360:CDS
ACTTGAAGCAGAGTAATACT+TGG	0.577210	2_4:-64643392	Msa0342360:exon
CCTTCAGCTGTTAAAGAAAG+CGG	0.588320	2_4:-64643638	Msa0342360:CDS
TGGGACTGAAGAAGCAGAAG+CGG	0.588338	2_4:-64643518	Msa0342360:CDS
ATTCACAGCATTATCATACT+CGG	0.588368	2_4:+64643492	None:intergenic
CGCTTTCTTTAACAGCTGAA+GGG	0.591750	2_4:+64643639	None:intergenic
TTCGATAAACGACGACACAA+TGG	0.594243	2_4:-64647534	Msa0342360:CDS
CTGACTACATGACTTCTGGA+GGG	0.596770	2_4:-64646239	Msa0342360:CDS
ACAACCAGTGGAATGTACAT+AGG	0.597483	2_4:-64643320	Msa0342360:three_prime_UTR
TCTGACTACATGACTTCTGG+AGG	0.598390	2_4:-64646240	Msa0342360:CDS
ATTTACAAACGACACAAGAA+GGG	0.598401	2_4:-64647654	Msa0342360:five_prime_UTR
TGGCTTACCAGTCGTTCGGA+TGG	0.598843	2_4:+64643610	None:intergenic
TGACTACATGACTTCTGGAG+GGG	0.607829	2_4:-64646238	Msa0342360:CDS
AGGGGAAGATGTAAAGAACA+TGG	0.610490	2_4:+64643093	None:intergenic
GATCAATGCGGCTATAGTCA+GGG	0.644027	2_4:+64646010	None:intergenic
AGCTGTTAAAGAAAGCGGGT+CGG	0.673250	2_4:-64643633	Msa0342360:CDS
GGATTTGTGCTAGATCAATG+CGG	0.738873	2_4:+64645998	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATACTTATAAAATAGATATA+AGG	+	chr2_4:64643356-64643375	None:intergenic	10.0%
!!	ACAAGTAATTTATATTAAAA+TGG	-	chr2_4:64647424-64647443	Msa0342360:intron	10.0%
!!!	TAATTTTTAAAATAGCAAAA+GGG	+	chr2_4:64647617-64647636	None:intergenic	10.0%
!!!	ATAATTTTTAAAATAGCAAA+AGG	+	chr2_4:64647618-64647637	None:intergenic	10.0%
!!!	TTAAATTTCTAGATTTATGT+TGG	-	chr2_4:64644216-64644235	Msa0342360:intron	15.0%
!!!	TGAATTTTCATAATAGAAAA+AGG	+	chr2_4:64644327-64644346	None:intergenic	15.0%
!!	AATTCATACAATGTATTAAT+AGG	-	chr2_4:64644341-64644360	Msa0342360:intron	15.0%
!!	ATTCATACAATGTATTAATA+GGG	-	chr2_4:64644342-64644361	Msa0342360:intron	15.0%
!!!	TTATCTTTTTACTTTAGTTT+TGG	+	chr2_4:64646454-64646473	None:intergenic	15.0%
!!	AAAACTAAAGTAAAAAGATA+AGG	-	chr2_4:64646453-64646472	Msa0342360:intron	15.0%
!!!	AATTTTTAAAATAGCAAAAG+GGG	+	chr2_4:64647616-64647635	None:intergenic	15.0%
!!!	TATGTTGGTTGTTTTTTAAA+AGG	-	chr2_4:64644231-64644250	Msa0342360:intron	20.0%
!!!	TTCTTTTTATATCTTCTATC+TGG	-	chr2_4:64644864-64644883	Msa0342360:intron	20.0%
!!!	TCTTTTTATATCTTCTATCT+GGG	-	chr2_4:64644865-64644884	Msa0342360:intron	20.0%
!!	TATAGTTGATTAAATAGAAC+AGG	+	chr2_4:64645052-64645071	None:intergenic	20.0%
!!	TTGAACATACATGAAATTAA+AGG	+	chr2_4:64645156-64645175	None:intergenic	20.0%
!!!	GCTGATTTAACTAAAAAAAA+AGG	+	chr2_4:64645242-64645261	None:intergenic	20.0%
!!	TTCTTAAGGTAATACTATTA+GGG	+	chr2_4:64645513-64645532	None:intergenic	20.0%
!!	TTTCTTAAGGTAATACTATT+AGG	+	chr2_4:64645514-64645533	None:intergenic	20.0%
!!	AAAAAAACAGTAATGATTTG+AGG	-	chr2_4:64646759-64646778	Msa0342360:intron	20.0%
!!	AAAAAACAGTAATGATTTGA+GGG	-	chr2_4:64646760-64646779	Msa0342360:intron	20.0%
!!	AATACAAAACACTTGAATTT+AGG	+	chr2_4:64646996-64647015	None:intergenic	20.0%
!!	TTGTAAATTTGCAATTATCA+TGG	+	chr2_4:64647101-64647120	None:intergenic	20.0%
!!	ACTTTATTACTTGATTGTAA+TGG	-	chr2_4:64647489-64647508	Msa0342360:CDS	20.0%
!!	TTTCTTTATGATAAATGAGT+AGG	-	chr2_4:64647567-64647586	Msa0342360:CDS	20.0%
!	TGAATAAAAAGGCGAAAAAT+CGG	-	chr2_4:64643095-64643114	Msa0342360:three_prime_UTR	25.0%
!!	AGTTGAATTTTTGTGCAATT+TGG	+	chr2_4:64643299-64643318	None:intergenic	25.0%
!!	ATATTGACTGTGTAAAAGTA+CGG	+	chr2_4:64643544-64643563	None:intergenic	25.0%
!	AATTAAATATACCGTAACAC+CGG	+	chr2_4:64643934-64643953	None:intergenic	25.0%
!	GTAAGTTAACTTCAATCTTA+GGG	-	chr2_4:64644277-64644296	Msa0342360:intron	25.0%
!	CAATGTCATTATGAAACATT+TGG	+	chr2_4:64644403-64644422	None:intergenic	25.0%
!	GTTTAATGATTGCTCAAAAA+AGG	-	chr2_4:64644513-64644532	Msa0342360:intron	25.0%
!	TGAAAGAAAACGATAATGTT+AGG	+	chr2_4:64644552-64644571	None:intergenic	25.0%
!!	TATCTTTTCTGATTTAGCAT+AGG	-	chr2_4:64644627-64644646	Msa0342360:intron	25.0%
!!	TGATGTTTTATGTGCATTAT+TGG	-	chr2_4:64644931-64644950	Msa0342360:intron	25.0%
!	GTTAAAATATTAGCTAAACC+TGG	-	chr2_4:64645199-64645218	Msa0342360:intron	25.0%
!	TAATTCAAAAACTTCAGTTC+TGG	-	chr2_4:64645407-64645426	Msa0342360:intron	25.0%
!!	ACATCTTTTGATATGTTTCA+CGG	-	chr2_4:64645561-64645580	Msa0342360:intron	25.0%
!	AACCATTAGAAAAGATTTAG+AGG	+	chr2_4:64645710-64645729	None:intergenic	25.0%
!!	GTTTCTCTAATAGTTTTCTT+AGG	-	chr2_4:64645727-64645746	Msa0342360:intron	25.0%
!!!	TAGAAAAGTTGGTAGAAAAT+AGG	+	chr2_4:64645852-64645871	None:intergenic	25.0%
!	AAGTAAAAAGATAAGGACTT+AGG	-	chr2_4:64646460-64646479	Msa0342360:intron	25.0%
!	AGTAAAAAGATAAGGACTTA+GGG	-	chr2_4:64646461-64646480	Msa0342360:intron	25.0%
!!	ATTTTGTTGAATCACTTGAA+CGG	-	chr2_4:64646805-64646824	Msa0342360:intron	25.0%
!!!	ATTCTGCTTACTTTTAATTG+TGG	-	chr2_4:64646932-64646951	Msa0342360:intron	25.0%
!!	TATTACTTGATTGTAATGGA+TGG	-	chr2_4:64647493-64647512	Msa0342360:CDS	25.0%
	ATTTACAAACGACACAAGAA+GGG	-	chr2_4:64643034-64643053	Msa0342360:three_prime_UTR	30.0%
!	ATGGAAGAAGATTTGGAATT+TGG	-	chr2_4:64643122-64643141	Msa0342360:three_prime_UTR	30.0%
!	TGGAAGAAGATTTGGAATTT+GGG	-	chr2_4:64643123-64643142	Msa0342360:three_prime_UTR	30.0%
	AAGCTTATTCCAAACTCAAA+AGG	-	chr2_4:64643249-64643268	Msa0342360:three_prime_UTR	30.0%
!	TGAATTTTTGTGCAATTTGG+CGG	+	chr2_4:64643296-64643315	None:intergenic	30.0%
!	ATCTTTTGATCTGTAACCTA+TGG	-	chr2_4:64643374-64643393	Msa0342360:three_prime_UTR	30.0%
!!	TATGTGTGTGTTTGTTATCA+CGG	-	chr2_4:64643573-64643592	Msa0342360:CDS	30.0%
	TAGCTTCTGTAAAATCACTA+TGG	+	chr2_4:64643623-64643642	None:intergenic	30.0%
	ATAGCCTATGTTTAGTATCA+CGG	+	chr2_4:64643700-64643719	None:intergenic	30.0%
	TATATCAATGTTGTCAACAG+TGG	-	chr2_4:64643717-64643736	Msa0342360:intron	30.0%
	TCAAAATTCCAAAAACATGC+TGG	+	chr2_4:64644007-64644026	None:intergenic	30.0%
	CGTAAGTTAACTTCAATCTT+AGG	-	chr2_4:64644276-64644295	Msa0342360:intron	30.0%
	CAATGTATTAATAGGGCTAT+TGG	-	chr2_4:64644349-64644368	Msa0342360:intron	30.0%
	TGACATTGAAATTTGACACT+TGG	-	chr2_4:64644415-64644434	Msa0342360:intron	30.0%
	AAGAAATGTGCTTAAACTAG+GGG	+	chr2_4:64644762-64644781	None:intergenic	30.0%
	GAAGAAATGTGCTTAAACTA+GGG	+	chr2_4:64644763-64644782	None:intergenic	30.0%
	AGAAGAAATGTGCTTAAACT+AGG	+	chr2_4:64644764-64644783	None:intergenic	30.0%
	CATTCATACAGAATGATCAT+AGG	+	chr2_4:64644827-64644846	None:intergenic	30.0%
	CTCTTTGACCATTAAATCTT+CGG	-	chr2_4:64644969-64644988	Msa0342360:intron	30.0%
	AAGAATAGCCGAAGATTTAA+TGG	+	chr2_4:64644980-64644999	None:intergenic	30.0%
	ATTTGACTAAACATTCCAAC+AGG	+	chr2_4:64645103-64645122	None:intergenic	30.0%
	AATTAAAGGAACATCCTTGA+GGG	+	chr2_4:64645142-64645161	None:intergenic	30.0%
	AAATTAAAGGAACATCCTTG+AGG	+	chr2_4:64645143-64645162	None:intergenic	30.0%
	CCTTAATCTTGGTATAAACA+AGG	+	chr2_4:64645282-64645301	None:intergenic	30.0%
!	CCTTGTTTATACCAAGATTA+AGG	-	chr2_4:64645279-64645298	Msa0342360:intron	30.0%
!	CATAATTCTTTTCCGAAAAC+AGG	+	chr2_4:64645343-64645362	None:intergenic	30.0%
	TTCGGAAAAGAATTATGAAC+TGG	-	chr2_4:64645346-64645365	Msa0342360:intron	30.0%
	TCGGAAAAGAATTATGAACT+GGG	-	chr2_4:64645347-64645366	Msa0342360:intron	30.0%
	ACATAAATGTAGCATGTCTT+TGG	+	chr2_4:64645485-64645504	None:intergenic	30.0%
	TCTTTGATAGAACATTATGG+CGG	+	chr2_4:64645663-64645682	None:intergenic	30.0%
	TGGTCTTTGATAGAACATTA+TGG	+	chr2_4:64645666-64645685	None:intergenic	30.0%
	GTTCTATCAAAGACCATATT+TGG	-	chr2_4:64645670-64645689	Msa0342360:intron	30.0%
!	GACCTCTAAATCTTTTCTAA+TGG	-	chr2_4:64645705-64645724	Msa0342360:intron	30.0%
!	TCTACCAACTTTTCTACTAT+AGG	-	chr2_4:64645856-64645875	Msa0342360:intron	30.0%
	TTACACGGTTTAGATATCTT+GGG	+	chr2_4:64646188-64646207	None:intergenic	30.0%
	ATATCTAAACCGTGTAACTT+GGG	-	chr2_4:64646191-64646210	Msa0342360:CDS	30.0%
	ACTTCAGTAAAAGGAGAAAT+GGG	+	chr2_4:64646254-64646273	None:intergenic	30.0%
	AACTTCAGTAAAAGGAGAAA+TGG	+	chr2_4:64646255-64646274	None:intergenic	30.0%
	TGGAATGTAACTTCAGTAAA+AGG	+	chr2_4:64646263-64646282	None:intergenic	30.0%
	TAGAAACAAGACGGAATATA+TGG	+	chr2_4:64646283-64646302	None:intergenic	30.0%
!!!	TTTAGTTTTGGATGTACTGA+CGG	+	chr2_4:64646442-64646461	None:intergenic	30.0%
	TATTGTTATGGGAAAATCTC+CGG	-	chr2_4:64646503-64646522	Msa0342360:intron	30.0%
	TGTGTTAAGTCTAATCAATC+AGG	+	chr2_4:64646717-64646736	None:intergenic	30.0%
!	TTGACCTTGAAAATTTTGCT+CGG	-	chr2_4:64646881-64646900	Msa0342360:intron	30.0%
!	TTATCCGAGCAAAATTTTCA+AGG	+	chr2_4:64646888-64646907	None:intergenic	30.0%
	AAGTAAGCAGAATAACTAAC+TGG	+	chr2_4:64646925-64646944	None:intergenic	30.0%
	ATTCACAGCATTATCATACT+CGG	+	chr2_4:64647199-64647218	None:intergenic	30.0%
!!	GATTGTAATGGATGGTTATT+TGG	-	chr2_4:64647501-64647520	Msa0342360:CDS	30.0%
!	AGCGAGTGAGTTGAATAAAA+AGG	-	chr2_4:64643084-64643103	Msa0342360:three_prime_UTR	35.0%
!	AGATTTGGAATTTGGGAAGA+AGG	-	chr2_4:64643130-64643149	Msa0342360:three_prime_UTR	35.0%
!!!	AGTAACGAACCTTTTGAGTT+TGG	+	chr2_4:64643261-64643280	None:intergenic	35.0%
!!!	ACTGAGTCATTTTTAGCCAT+AGG	+	chr2_4:64643393-64643412	None:intergenic	35.0%
	TAACAATCATCTTGCTCTCT+GGG	+	chr2_4:64643423-64643442	None:intergenic	35.0%
	ATAACAATCATCTTGCTCTC+TGG	+	chr2_4:64643424-64643443	None:intergenic	35.0%
!	AAGCTACAAAGTGTAGCTTT+TGG	-	chr2_4:64643637-64643656	Msa0342360:CDS	35.0%
!!	AGCTTTTGGAAAATCACGAT+AGG	-	chr2_4:64643651-64643670	Msa0342360:intron	35.0%
!	AAATCTTGCCAGCATGTTTT+TGG	-	chr2_4:64643996-64644015	Msa0342360:intron	35.0%
!!	TTTGACCTAATTCTGAGATG+TGG	-	chr2_4:64644022-64644041	Msa0342360:intron	35.0%
	TAGTACCACATCTCAGAATT+AGG	+	chr2_4:64644030-64644049	None:intergenic	35.0%
	TGATGCAGCAGTCAAAATAA+TGG	+	chr2_4:64644068-64644087	None:intergenic	35.0%
	TAACAGAGTAAATCAGTCTG+TGG	+	chr2_4:64644134-64644153	None:intergenic	35.0%
!	TTTTCTGACTACATGACTTC+TGG	-	chr2_4:64644445-64644464	Msa0342360:intron	35.0%
	TGCATTATTGGTATATCGAG+TGG	-	chr2_4:64644943-64644962	Msa0342360:intron	35.0%
	GCATTATTGGTATATCGAGT+GGG	-	chr2_4:64644944-64644963	Msa0342360:intron	35.0%
	ACATAGTAACTTGATCCTGT+TGG	-	chr2_4:64645085-64645104	Msa0342360:intron	35.0%
	CATGTATGTTCAACCTGTTA+AGG	-	chr2_4:64645163-64645182	Msa0342360:intron	35.0%
	GCTACATTTAGATATTCACC+AGG	+	chr2_4:64645220-64645239	None:intergenic	35.0%
!	TACCTCAAATCACCTGTTTT+CGG	-	chr2_4:64645328-64645347	Msa0342360:intron	35.0%
	AATTACCCTAATCCAACCAA+GGG	+	chr2_4:64645378-64645397	None:intergenic	35.0%
	AAATTACCCTAATCCAACCA+AGG	+	chr2_4:64645379-64645398	None:intergenic	35.0%
	AAAATCAGACAACTTCTCTG+TGG	-	chr2_4:64645433-64645452	Msa0342360:intron	35.0%
	TAAATGTAGCATGTCTTTGG+TGG	+	chr2_4:64645482-64645501	None:intergenic	35.0%
	ACCTTAAGAAAAATCCCCAA+AGG	-	chr2_4:64645523-64645542	Msa0342360:intron	35.0%
	CCTTAAGAAAAATCCCCAAA+GGG	-	chr2_4:64645524-64645543	Msa0342360:intron	35.0%
	AATATATTGACCACCCTTTG+GGG	+	chr2_4:64645540-64645559	None:intergenic	35.0%
	CAATATATTGACCACCCTTT+GGG	+	chr2_4:64645541-64645560	None:intergenic	35.0%
	TCAATATATTGACCACCCTT+TGG	+	chr2_4:64645542-64645561	None:intergenic	35.0%
!	CAATGAGTTGGATCCAAATA+TGG	+	chr2_4:64645686-64645705	None:intergenic	35.0%
	AGATTTAGAGGTCAATGAGT+TGG	+	chr2_4:64645698-64645717	None:intergenic	35.0%
	AAGAAGAGTAGATCAAATGG+AGG	+	chr2_4:64645782-64645801	None:intergenic	35.0%
	GGTAAGAAGAGTAGATCAAA+TGG	+	chr2_4:64645785-64645804	None:intergenic	35.0%
	TTGATCTACTCTTCTTACCA+CGG	-	chr2_4:64645786-64645805	Msa0342360:intron	35.0%
	GAAAATAGGCTTAGATGGTT+TGG	+	chr2_4:64645838-64645857	None:intergenic	35.0%
	TGGTAGAAAATAGGCTTAGA+TGG	+	chr2_4:64645843-64645862	None:intergenic	35.0%
	AGCACCTATAGTAGAAAAGT+TGG	+	chr2_4:64645863-64645882	None:intergenic	35.0%
	AGACTAGACATGATAGGATT+AGG	+	chr2_4:64645915-64645934	None:intergenic	35.0%
	AGCTGAAAGGAAAGTTCTAT+CGG	+	chr2_4:64646050-64646069	None:intergenic	35.0%
	AACTTTCCTTTCAGCTTAAG+TGG	-	chr2_4:64646054-64646073	Msa0342360:intron	35.0%
!	AAAGTACCACTTAAGCTGAA+AGG	+	chr2_4:64646063-64646082	None:intergenic	35.0%
	TACATCATCGTATTCAAGCT+GGG	+	chr2_4:64646128-64646147	None:intergenic	35.0%
!!	TTCTCCGTCATTTTGTACTA+TGG	-	chr2_4:64646161-64646180	Msa0342360:intron	35.0%
	GTTACACGGTTTAGATATCT+TGG	+	chr2_4:64646189-64646208	None:intergenic	35.0%
	GATATCTAAACCGTGTAACT+TGG	-	chr2_4:64646190-64646209	Msa0342360:CDS	35.0%
	TATCTAAACCGTGTAACTTG+GGG	-	chr2_4:64646192-64646211	Msa0342360:CDS	35.0%
	ATATCATACCCCAAGTTACA+CGG	+	chr2_4:64646203-64646222	None:intergenic	35.0%
!	TCTGCAAAAAGCATACATCT+CGG	-	chr2_4:64646396-64646415	Msa0342360:intron	35.0%
	TAACAATAGGATTGCACCAA+GGG	+	chr2_4:64646491-64646510	None:intergenic	35.0%
	ATAACAATAGGATTGCACCA+AGG	+	chr2_4:64646492-64646511	None:intergenic	35.0%
	TTGGTGCAATCCTATTGTTA+TGG	-	chr2_4:64646491-64646510	Msa0342360:intron	35.0%
	TGGTGCAATCCTATTGTTAT+GGG	-	chr2_4:64646492-64646511	Msa0342360:intron	35.0%
!	GGAGATTTTCCCATAACAAT+AGG	+	chr2_4:64646504-64646523	None:intergenic	35.0%
!!	ATCCTGGATAGCTCTAATAT+AGG	-	chr2_4:64646572-64646591	Msa0342360:intron	35.0%
	TTGCTCGGATAACATGATAA+CGG	-	chr2_4:64646896-64646915	Msa0342360:intron	35.0%
!!	CTTTTAATTGTGGACGTGAT+TGG	-	chr2_4:64646942-64646961	Msa0342360:intron	35.0%
	ACTTGAAGCAGAGTAATACT+TGG	-	chr2_4:64647296-64647315	Msa0342360:intron	35.0%
	GTTTCTTCCCTTTGCCAAAA+CGG	+	chr2_4:64643062-64643081	None:intergenic	40.0%
	TTCGATAAACGACGACACAA+TGG	-	chr2_4:64643154-64643173	Msa0342360:three_prime_UTR	40.0%
!	AAGCAAAACAGCGATTTTGG+TGG	+	chr2_4:64643195-64643214	None:intergenic	40.0%
!	ACGAAGCAAAACAGCGATTT+TGG	+	chr2_4:64643198-64643217	None:intergenic	40.0%
!	GTTATGTTAGTTTCCGCTTC+CGG	-	chr2_4:64643459-64643478	Msa0342360:CDS	40.0%
!	ACTGTGTAAAAGTACGGTGT+AGG	+	chr2_4:64643538-64643557	None:intergenic	40.0%
!!	TGTGTGTTTGTTATCACGGT+GGG	-	chr2_4:64643577-64643596	Msa0342360:CDS	40.0%
	ACTATGGATCGTCATGATTC+TGG	+	chr2_4:64643607-64643626	None:intergenic	40.0%
!	AATATACCGTAACACCGGTT+AGG	+	chr2_4:64643929-64643948	None:intergenic	40.0%
	CTGGCAAGATTTACACGTTT+GGG	+	chr2_4:64643988-64644007	None:intergenic	40.0%
!	TCTGAGATGTGGTACTATAG+CGG	-	chr2_4:64644033-64644052	Msa0342360:intron	40.0%
	TGAAATTTGACACTTGGCAG+TGG	-	chr2_4:64644421-64644440	Msa0342360:intron	40.0%
	TTTAGCATAGGTCCGTGAAA+TGG	-	chr2_4:64644639-64644658	Msa0342360:intron	40.0%
	GAAACAACGACTCCATTTCA+CGG	+	chr2_4:64644654-64644673	None:intergenic	40.0%
	GGATTTGTGCTAGATCAATG+CGG	+	chr2_4:64644693-64644712	None:intergenic	40.0%
	GGAAAAGCAGAAACTACATC+TGG	-	chr2_4:64644732-64644751	Msa0342360:intron	40.0%
	ATTGAAGTTTCGTACCCTCA+AGG	-	chr2_4:64645125-64645144	Msa0342360:intron	40.0%
	CAAACAAAGAGAGCCTTAAC+AGG	+	chr2_4:64645179-64645198	None:intergenic	40.0%
	CTGTTAAGGCTCTCTTTGTT+TGG	-	chr2_4:64645177-64645196	Msa0342360:intron	40.0%
	GGACGAAAAAGCCTTAATCT+TGG	+	chr2_4:64645293-64645312	None:intergenic	40.0%
	GAGGTAGCATGTCATAAAGA+AGG	+	chr2_4:64645314-64645333	None:intergenic	40.0%
	TTCCGAAAACAGGTGATTTG+AGG	+	chr2_4:64645333-64645352	None:intergenic	40.0%
	TAACACCCTTGGTTGGATTA+GGG	-	chr2_4:64645370-64645389	Msa0342360:intron	40.0%
	TCTGTGGTCATCTGTTAACT+TGG	-	chr2_4:64645449-64645468	Msa0342360:intron	40.0%
!!	CCCTTTGGGGATTTTTCTTA+AGG	+	chr2_4:64645527-64645546	None:intergenic	40.0%
	TAAGAAAAATCCCCAAAGGG+TGG	-	chr2_4:64645527-64645546	Msa0342360:intron	40.0%
	AGTCAGGTTAAAAGAGGTAG+AGG	+	chr2_4:64645757-64645776	None:intergenic	40.0%
	ACATCATTAGAGAGAGAGTG+GGG	+	chr2_4:64645888-64645907	None:intergenic	40.0%
	GACATCATTAGAGAGAGAGT+GGG	+	chr2_4:64645889-64645908	None:intergenic	40.0%
	TGACATCATTAGAGAGAGAG+TGG	+	chr2_4:64645890-64645909	None:intergenic	40.0%
	GTGGTAAGACTAGACATGAT+AGG	+	chr2_4:64645921-64645940	None:intergenic	40.0%
	GTACATCATCGTATTCAAGC+TGG	+	chr2_4:64646129-64646148	None:intergenic	40.0%
	GGGTCCATAGTACAAAATGA+CGG	+	chr2_4:64646168-64646187	None:intergenic	40.0%
	ATCTCCAACTTTCACCTCTA+AGG	-	chr2_4:64646224-64646243	Msa0342360:CDS	40.0%
	TCTACCTTAGAGGTGAAAGT+TGG	+	chr2_4:64646231-64646250	None:intergenic	40.0%
!!	ATTCCGTCTTGTTTCTACTC+AGG	-	chr2_4:64646286-64646305	Msa0342360:intron	40.0%
	TATCCAGGATATGTATGAGG+GGG	+	chr2_4:64646562-64646581	None:intergenic	40.0%
	CTATCCAGGATATGTATGAG+GGG	+	chr2_4:64646563-64646582	None:intergenic	40.0%
	GCTATCCAGGATATGTATGA+GGG	+	chr2_4:64646564-64646583	None:intergenic	40.0%
	AGCTATCCAGGATATGTATG+AGG	+	chr2_4:64646565-64646584	None:intergenic	40.0%
	TGCCTATATTAGAGCTATCC+AGG	+	chr2_4:64646577-64646596	None:intergenic	40.0%
	GCTTTCCACAAAATCTCTCT+AGG	-	chr2_4:64646621-64646640	Msa0342360:intron	40.0%
!	GAGTACCTAGAGAGATTTTG+TGG	+	chr2_4:64646629-64646648	None:intergenic	40.0%
!	AGAAATCCGTGATTTGGAGA+AGG	+	chr2_4:64646661-64646680	None:intergenic	40.0%
	GTTGAATCACTTGAACGGAA+CGG	-	chr2_4:64646810-64646829	Msa0342360:intron	40.0%
!!	CTTTGCTGTTCTTTCTCAAG+TGG	-	chr2_4:64646842-64646861	Msa0342360:intron	40.0%
	CACTTGAATTTAGGTGAGTG+CGG	+	chr2_4:64646987-64647006	None:intergenic	40.0%
	CGCTTTCTTTAACAGCTGAA+GGG	+	chr2_4:64647052-64647071	None:intergenic	40.0%
	CCTTCAGCTGTTAAAGAAAG+CGG	-	chr2_4:64647050-64647069	Msa0342360:intron	40.0%
	CTTCAGCTGTTAAAGAAAGC+GGG	-	chr2_4:64647051-64647070	Msa0342360:intron	40.0%
	CTTCAGTGATCTCCTTAACA+TGG	+	chr2_4:64647146-64647165	None:intergenic	40.0%
	GCTGTGAATGAAGCTATTAG+AGG	-	chr2_4:64647210-64647229	Msa0342360:intron	40.0%
	TGCTCAGTGCTAACAGATAT+TGG	-	chr2_4:64647336-64647355	Msa0342360:intron	40.0%
	ACAACCAGTGGAATGTACAT+AGG	-	chr2_4:64647368-64647387	Msa0342360:intron	40.0%
	AGGGGAAGATGTAAAGAACA+TGG	+	chr2_4:64647598-64647617	None:intergenic	40.0%
	AAGGCGAAAAATCGGAGTGA+TGG	-	chr2_4:64643103-64643122	Msa0342360:three_prime_UTR	45.0%
!	CGGAGTGATGGAAGAAGATT+TGG	-	chr2_4:64643115-64643134	Msa0342360:three_prime_UTR	45.0%
	ACATTAAACGAGGAGGTCTC+GGG	+	chr2_4:64643492-64643511	None:intergenic	45.0%
	GACATTAAACGAGGAGGTCT+CGG	+	chr2_4:64643493-64643512	None:intergenic	45.0%
	CTAAGCGACATTAAACGAGG+AGG	+	chr2_4:64643499-64643518	None:intergenic	45.0%
	GAGCTAAGCGACATTAAACG+AGG	+	chr2_4:64643502-64643521	None:intergenic	45.0%
	AAAGTACGGTGTAGGTAGCT+CGG	+	chr2_4:64643530-64643549	None:intergenic	45.0%
!!	GTGTGTGTTTGTTATCACGG+TGG	-	chr2_4:64643576-64643595	Msa0342360:CDS	45.0%
	CTCGCCGTGATACTAAACAT+AGG	-	chr2_4:64643693-64643712	Msa0342360:intron	45.0%
	GTTTGACTCAAAGCATGTCG+TGG	-	chr2_4:64643760-64643779	Msa0342360:intron	45.0%
!!!	GCTTTTCAGTTCGGTGTTTC+AGG	+	chr2_4:64643966-64643985	None:intergenic	45.0%
!	CACGTTTGGGCTTTTCAGTT+CGG	+	chr2_4:64643975-64643994	None:intergenic	45.0%
	GCTGGCAAGATTTACACGTT+TGG	+	chr2_4:64643989-64644008	None:intergenic	45.0%
	GGCAGAACCATCTAGTATAG+CGG	+	chr2_4:64644092-64644111	None:intergenic	45.0%
	TCTGACTACATGACTTCTGG+AGG	-	chr2_4:64644448-64644467	Msa0342360:intron	45.0%
	CTGACTACATGACTTCTGGA+GGG	-	chr2_4:64644449-64644468	Msa0342360:intron	45.0%
!	TGACTACATGACTTCTGGAG+GGG	-	chr2_4:64644450-64644469	Msa0342360:intron	45.0%
	GATCAATGCGGCTATAGTCA+GGG	+	chr2_4:64644681-64644700	None:intergenic	45.0%
	AGATCAATGCGGCTATAGTC+AGG	+	chr2_4:64644682-64644701	None:intergenic	45.0%
	CCTGTTCTTGAACAGCTCTA+AGG	+	chr2_4:64644714-64644733	None:intergenic	45.0%
	CCTTAGAGCTGTTCAAGAAC+AGG	-	chr2_4:64644711-64644730	Msa0342360:intron	45.0%
	TATGAACTGGGTAACACCCT+TGG	-	chr2_4:64645359-64645378	Msa0342360:intron	45.0%
	GTAACACCCTTGGTTGGATT+AGG	-	chr2_4:64645369-64645388	Msa0342360:intron	45.0%
	AACGCCTTATCCCACTAAGT+GGG	-	chr2_4:64645616-64645635	Msa0342360:intron	45.0%
	GAGGAGAGTCAGGTTAAAAG+AGG	+	chr2_4:64645763-64645782	None:intergenic	45.0%
	AGATCAAATGGAGGAGAGTC+AGG	+	chr2_4:64645773-64645792	None:intergenic	45.0%
	CATCATTAGAGAGAGAGTGG+GGG	+	chr2_4:64645887-64645906	None:intergenic	45.0%
	CGAGAGTAAAGTAAGCGTAG+CGG	+	chr2_4:64645968-64645987	None:intergenic	45.0%
	CGCTTACTTTACTCTCGTGT+TGG	-	chr2_4:64645971-64645990	Msa0342360:CDS	45.0%
!	GTTGTATGGTACGGAGTGTT+GGG	+	chr2_4:64646007-64646026	None:intergenic	45.0%
	TGTTGTATGGTACGGAGTGT+TGG	+	chr2_4:64646008-64646027	None:intergenic	45.0%
	TCCGTACCATACAACATTGC+CGG	-	chr2_4:64646012-64646031	Msa0342360:CDS	45.0%
	ACCGGCAATGTTGTATGGTA+CGG	+	chr2_4:64646016-64646035	None:intergenic	45.0%
	CTTATCGCACAAAACACCTG+AGG	-	chr2_4:64646083-64646102	Msa0342360:intron	45.0%
	TTGAAATGGAGAAGAGCCTC+AGG	+	chr2_4:64646102-64646121	None:intergenic	45.0%
	TTCAAGCTGGGTGGTTGAAA+TGG	+	chr2_4:64646116-64646135	None:intergenic	45.0%
	ATCATCGTATTCAAGCTGGG+TGG	+	chr2_4:64646125-64646144	None:intergenic	45.0%
	GAGAAATGGGTCTACCTTAG+AGG	+	chr2_4:64646241-64646260	None:intergenic	45.0%
!	GCAGATGATGTAGTCTTGCT+TGG	+	chr2_4:64646381-64646400	None:intergenic	45.0%
!!	TACATCTCGGTGCTAACTCT+TGG	-	chr2_4:64646409-64646428	Msa0342360:intron	45.0%
!	AGAGATTTTGTGGAAAGCCC+TGG	+	chr2_4:64646619-64646638	None:intergenic	45.0%
	CATACGCCTTCTCCAAATCA+CGG	-	chr2_4:64646652-64646671	Msa0342360:intron	45.0%
	CGTACGAGAAATCCGTGATT+TGG	+	chr2_4:64646667-64646686	None:intergenic	45.0%
	CCGCTTTCTTTAACAGCTGA+AGG	+	chr2_4:64647053-64647072	None:intergenic	45.0%
	AGCTGTTAAAGAAAGCGGGT+CGG	-	chr2_4:64647055-64647074	Msa0342360:intron	45.0%
	ATCATGGCTTACCAGTCGTT+CGG	+	chr2_4:64647085-64647104	None:intergenic	45.0%
	GCATGAGTGTGTCCATGTTA+AGG	-	chr2_4:64647131-64647150	Msa0342360:intron	45.0%
	AAGGAGATCACTGAAGCTTC+TGG	-	chr2_4:64647150-64647169	Msa0342360:intron	45.0%
	AGGAGATCACTGAAGCTTCT+GGG	-	chr2_4:64647151-64647170	Msa0342360:intron	45.0%
!!	TGAAGCTATTAGAGGTGTCC+AGG	-	chr2_4:64647218-64647237	Msa0342360:intron	45.0%
	CAGTGCTAACAGATATTGGC+AGG	-	chr2_4:64647340-64647359	Msa0342360:intron	45.0%
	TGTGCCTATGTACATTCCAC+TGG	+	chr2_4:64647375-64647394	None:intergenic	45.0%
!!!	ACACAAGAAGGGTGCCGTTT+TGG	-	chr2_4:64643045-64643064	Msa0342360:three_prime_UTR	50.0%
!!!	AAGGGTGCCGTTTTGGCAAA+GGG	-	chr2_4:64643052-64643071	Msa0342360:three_prime_UTR	50.0%
!	GAGAAGCCTAACCGGTGTTA+CGG	-	chr2_4:64643920-64643939	Msa0342360:intron	50.0%
	GCATCAGCCGCTATACTAGA+TGG	-	chr2_4:64644082-64644101	Msa0342360:intron	50.0%
	ATCAGTCTGTGGCGTCTACA+TGG	+	chr2_4:64644123-64644142	None:intergenic	50.0%
!	CATGACTTCTGGAGGGGAAT+TGG	-	chr2_4:64644456-64644475	Msa0342360:intron	50.0%
	GCTTATCAGCAGCTTTGCAG+TGG	-	chr2_4:64644478-64644497	Msa0342360:intron	50.0%
	AACTGGGTAACACCCTTGGT+TGG	-	chr2_4:64645363-64645382	Msa0342360:intron	50.0%
!	AGCATGTCTTTGGTGGTCAC+TGG	+	chr2_4:64645475-64645494	None:intergenic	50.0%
	CAACGCCTTATCCCACTAAG+TGG	-	chr2_4:64645615-64645634	Msa0342360:intron	50.0%
	ACGCCTTATCCCACTAAGTG+GGG	-	chr2_4:64645617-64645636	Msa0342360:intron	50.0%
	CTTATCCCACTAAGTGGGGT+CGG	-	chr2_4:64645621-64645640	Msa0342360:intron	50.0%
	TCTTCTTACCACGGCGTCTA+CGG	-	chr2_4:64645795-64645814	Msa0342360:intron	50.0%
	AGGATGTTGCGTTGGATGAG+TGG	+	chr2_4:64645940-64645959	None:intergenic	50.0%
!	AAGTAAGCGTAGCGGAGATG+AGG	+	chr2_4:64645960-64645979	None:intergenic	50.0%
	GTCAGACCGGCAATGTTGTA+TGG	+	chr2_4:64646021-64646040	None:intergenic	50.0%
	CCGCCTGAGTAGAAACAAGA+CGG	+	chr2_4:64646292-64646311	None:intergenic	50.0%
!!	CCGTCTTGTTTCTACTCAGG+CGG	-	chr2_4:64646289-64646308	Msa0342360:intron	50.0%
!	AGGCAAGCCTTAGAAGCGTA+CGG	+	chr2_4:64646318-64646337	None:intergenic	50.0%
	TAAACGGGAGGCTAGAGACT+TGG	+	chr2_4:64646341-64646360	None:intergenic	50.0%
	AGTCGAGGGAGGAGTTAAAC+GGG	+	chr2_4:64646356-64646375	None:intergenic	50.0%
	GAGTCGAGGGAGGAGTTAAA+CGG	+	chr2_4:64646357-64646376	None:intergenic	50.0%
!	AGTCTTGCTTGGTGAGTCGA+GGG	+	chr2_4:64646370-64646389	None:intergenic	50.0%
!	TAGTCTTGCTTGGTGAGTCG+AGG	+	chr2_4:64646371-64646390	None:intergenic	50.0%
	AAGGACTTAGGGTTGACCCT+TGG	-	chr2_4:64646472-64646491	Msa0342360:intron	50.0%
	AAGCCCCCTCATACATATCC+TGG	-	chr2_4:64646556-64646575	Msa0342360:intron	50.0%
	GAAAGCCCTGGAGAAGAAAG+GGG	+	chr2_4:64646607-64646626	None:intergenic	50.0%
	GGAAAGCCCTGGAGAAGAAA+GGG	+	chr2_4:64646608-64646627	None:intergenic	50.0%
	TGGAAAGCCCTGGAGAAGAA+AGG	+	chr2_4:64646609-64646628	None:intergenic	50.0%
!!	CAAGTGGTGTTGCTTGCAGT+TGG	-	chr2_4:64646858-64646877	Msa0342360:intron	50.0%
	TGGACACACTCATGCTCTGT+TGG	+	chr2_4:64647126-64647145	None:intergenic	50.0%
	TGGGACTGAAGAAGCAGAAG+CGG	-	chr2_4:64647170-64647189	Msa0342360:intron	50.0%
	TGATGACCATGACAGCATCC+TGG	+	chr2_4:64647239-64647258	None:intergenic	50.0%
	TGGCAGGTGTTTACAACCAG+TGG	-	chr2_4:64647356-64647375	Msa0342360:intron	50.0%
!!!	GAAGGGTGCCGTTTTGGCAA+AGG	-	chr2_4:64643051-64643070	Msa0342360:three_prime_UTR	55.0%
	CTCGGGTTTATCTCCGGAAG+CGG	+	chr2_4:64643475-64643494	None:intergenic	55.0%
	GGAGGTCTCGGGTTTATCTC+CGG	+	chr2_4:64643481-64643500	None:intergenic	55.0%
	TACGGTGTAGGTAGCTCGGT+TGG	+	chr2_4:64643526-64643545	None:intergenic	55.0%
	GACAGCGAGAGAAGCCTAAC+CGG	-	chr2_4:64643912-64643931	Msa0342360:intron	55.0%
	GGCGTCTACATGGCACACAA+TGG	+	chr2_4:64644113-64644132	None:intergenic	55.0%
	CGACCCCACTTAGTGGGATA+AGG	+	chr2_4:64645623-64645642	None:intergenic	55.0%
	TGTAGCCGACCCCACTTAGT+GGG	+	chr2_4:64645629-64645648	None:intergenic	55.0%
	ATGTAGCCGACCCCACTTAG+TGG	+	chr2_4:64645630-64645649	None:intergenic	55.0%
	ACTAAGTGGGGTCGGCTACA+TGG	-	chr2_4:64645629-64645648	Msa0342360:intron	55.0%
	CTTCTTACCACGGCGTCTAC+GGG	-	chr2_4:64645796-64645815	Msa0342360:intron	55.0%
	CGGAGATGAGGATGTTGCGT+TGG	+	chr2_4:64645948-64645967	None:intergenic	55.0%
!!	GTATGGTACGGAGTGTTGGG+CGG	+	chr2_4:64646004-64646023	None:intergenic	55.0%
	CTATCGGACAGCAGTCAGAC+CGG	+	chr2_4:64646034-64646053	None:intergenic	55.0%
	GCGGAAACCGTACGCTTCTA+AGG	-	chr2_4:64646308-64646327	Msa0342360:intron	55.0%
	TAGTGTGAGGACGCAGGATG+GGG	+	chr2_4:64646532-64646551	None:intergenic	55.0%
	CTAGTGTGAGGACGCAGGAT+GGG	+	chr2_4:64646533-64646552	None:intergenic	55.0%
	ACTAGTGTGAGGACGCAGGA+TGG	+	chr2_4:64646534-64646553	None:intergenic	55.0%
	TTCGACTAGTGTGAGGACGC+AGG	+	chr2_4:64646538-64646557	None:intergenic	55.0%
	TCCTCACCCCTTTCTTCTCC+AGG	-	chr2_4:64646598-64646617	Msa0342360:intron	55.0%
	CCTCACCCCTTTCTTCTCCA+GGG	-	chr2_4:64646599-64646618	Msa0342360:intron	55.0%
	TGGCTTACCAGTCGTTCGGA+TGG	+	chr2_4:64647081-64647100	None:intergenic	55.0%
	AGGTGTCCAGGATGCTGTCA+TGG	-	chr2_4:64647230-64647249	Msa0342360:intron	55.0%
	ACGGGAGGCTAGAGACTTGG+AGG	+	chr2_4:64646338-64646357	None:intergenic	60.0%
	CGAGGGAGGAGTTAAACGGG+AGG	+	chr2_4:64646353-64646372	None:intergenic	60.0%
!	CTTGCTTGGTGAGTCGAGGG+AGG	+	chr2_4:64646367-64646386	None:intergenic	60.0%
	AGGACGCAGGATGGGGATAC+CGG	+	chr2_4:64646525-64646544	None:intergenic	60.0%
	AGGGGGCTTCGACTAGTGTG+AGG	+	chr2_4:64646545-64646564	None:intergenic	60.0%
	CCCTGGAGAAGAAAGGGGTG+AGG	+	chr2_4:64646602-64646621	None:intergenic	60.0%
	GAGAAGACCCGTAGACGCCG+TGG	+	chr2_4:64645806-64645825	None:intergenic	65.0%
	GGGTCGGCCATCCGAACGAC+TGG	-	chr2_4:64647071-64647090	Msa0342360:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr2_4	gene	64643034	64647676	64643034	ID=Msa0342360;Name=Msa0342360
chr2_4	mRNA	64643034	64647676	64643034	ID=Msa0342360-mRNA-1;Parent=Msa0342360;Name=Msa0342360-mRNA-1;_AED=0.13;_eAED=0.13;_QI=88\|1\|1\|1\|1\|1\|4\|365\|205
chr2_4	exon	64643034	64643668	64643034	ID=Msa0342360-mRNA-1:exon:20753;Parent=Msa0342360-mRNA-1
chr2_4	exon	64645957	64646061	64645957	ID=Msa0342360-mRNA-1:exon:20752;Parent=Msa0342360-mRNA-1
chr2_4	exon	64646176	64646269	64646176	ID=Msa0342360-mRNA-1:exon:20751;Parent=Msa0342360-mRNA-1
chr2_4	exon	64647440	64647676	64647440	ID=Msa0342360-mRNA-1:exon:20750;Parent=Msa0342360-mRNA-1
chr2_4	five_prime_UTR	64647589	64647676	64647589	ID=Msa0342360-mRNA-1:five_prime_utr;Parent=Msa0342360-mRNA-1
chr2_4	CDS	64647440	64647588	64647440	ID=Msa0342360-mRNA-1:cds;Parent=Msa0342360-mRNA-1
chr2_4	CDS	64646176	64646269	64646176	ID=Msa0342360-mRNA-1:cds;Parent=Msa0342360-mRNA-1
chr2_4	CDS	64645957	64646061	64645957	ID=Msa0342360-mRNA-1:cds;Parent=Msa0342360-mRNA-1
chr2_4	CDS	64643399	64643668	64643399	ID=Msa0342360-mRNA-1:cds;Parent=Msa0342360-mRNA-1
chr2_4	three_prime_UTR	64643034	64643398	64643034	ID=Msa0342360-mRNA-1:three_prime_utr;Parent=Msa0342360-mRNA-1

Gene Sequence

>Msa0342360

ATGGAAGAAGATTTGGAATTTGGGAAGAAGGTTTCGATAAACGACGACACAATGGAAGTAGTAGTTGATTCCACCAAAATCGCTGTTTTGCTTCGTAGTTTTCTCGATATTCAACAACGCAGAGCTCAAGCTTATTCCAAACTCAAAAGTGGATTTTCTGACTACATGACTTCTGGAGGGGAATTGGCTTATCAGCAGCTTTGCAGTGGAATCACATCAGAGTTTAATGATTGCTCAAAAAAGGTCCGTGAAATGGAGTCGTTGTTTCAGAGCCCTGACTATAGCCGCATTGATCTAGCACAAATCCTTAGAGCTGTTCAAGAACAGGAAAAGCAGAAACTACATCTGACAGCTACCCTTCAGCTGTTAAAGAAAGCGGGTCGGCCATCCGAACGACTGGTAAGCCATGATAATTGCAAATTTACAAAGCCAACAGAGCATGAGTGTGTCCATGTTAAGGAGATCACTGAAGCTTCTGGGACTGAAGAAGCAGAAGCGGATGCCGAGTATGATAATGCTGTGAATGAAGCTATTAGAGGTGTCCAGGATGCTGTCATGGTCATCAATGAACATCTAGAAGAAGTCAGATATGAGATTGAAGCACTTGAAGCAGAGTAA

Protein sequence

>Msa0342360

MEEDLEFGKKVSINDDTMEVVVDSTKIAVLLRSFLDIQQRRAQAYSKLKSGFSDYMTSGGELAYQQLCSGITSEFNDCSKKVREMESLFQSPDYSRIDLAQILRAVQEQEKQKLHLTATLQLLKKAGRPSERLVSHDNCKFTKPTEHECVHVKEITEASGTEEAEADAEYDNAVNEAIRGVQDAVMVINEHLEEVRYEIEALEAE*