Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483860 | XP_029124621.1 | 100.000 | 57 | 0 | 0 | 1 | 57 | 418 | 474 | 1.29e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483860 | sp|Q9M9L0|APC11_ARATH | 100.000 | 56 | 0 | 0 | 1 | 56 | 28 | 83 | 5.58e-37 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483860 | A2Q2S8 | 100.000 | 57 | 0 | 0 | 1 | 57 | 39 | 95 | 7.69e-36 | 124 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0483860 | 0.802951 | 4.396689e-49 | -8.615850e-47 |
| Msa0002930 | Msa0483860 | 0.807046 | 6.118606e-50 | -8.615850e-47 |
| Msa0004860 | Msa0483860 | 0.801931 | 7.131592e-49 | -8.615850e-47 |
| Msa0004920 | Msa0483860 | 0.826498 | 2.625198e-54 | -8.615850e-47 |
| Msa0015300 | Msa0483860 | 0.805151 | 1.533170e-49 | -8.615850e-47 |
| Msa0017510 | Msa0483860 | 0.840434 | 8.715187e-58 | -8.615850e-47 |
| Msa0025730 | Msa0483860 | 0.811323 | 7.415627e-51 | -8.615850e-47 |
| Msa0030380 | Msa0483860 | 0.805142 | 1.539635e-49 | -8.615850e-47 |
| Msa0036430 | Msa0483860 | 0.804425 | 2.173349e-49 | -8.615850e-47 |
| Msa0037700 | Msa0483860 | 0.806933 | 6.467178e-50 | -8.615850e-47 |
| Msa0040450 | Msa0483860 | 0.829948 | 3.867969e-55 | -8.615850e-47 |
| Msa0051770 | Msa0483860 | 0.819545 | 1.098101e-52 | -8.615850e-47 |
| Msa0061080 | Msa0483860 | 0.811720 | 6.079343e-51 | -8.615850e-47 |
| Msa0067620 | Msa0483860 | 0.814735 | 1.324405e-51 | -8.615850e-47 |
| Msa0072370 | Msa0483860 | 0.817450 | 3.277163e-52 | -8.615850e-47 |
| Msa0076000 | Msa0483860 | 0.828675 | 7.879287e-55 | -8.615850e-47 |
| Msa0089630 | Msa0483860 | 0.807820 | 4.193866e-50 | -8.615850e-47 |
| Msa0094120 | Msa0483860 | 0.805613 | 1.226925e-49 | -8.615850e-47 |
| Msa0101700 | Msa0483860 | 0.804675 | 1.927943e-49 | -8.615850e-47 |
| Msa0103000 | Msa0483860 | 0.801787 | 7.635323e-49 | -8.615850e-47 |
| Msa0110970 | Msa0483860 | 0.827031 | 1.958213e-54 | -8.615850e-47 |
| Msa0124340 | Msa0483860 | 0.800258 | 1.568144e-48 | -8.615850e-47 |
| Msa0130570 | Msa0483860 | 0.804166 | 2.460654e-49 | -8.615850e-47 |
| Msa0136070 | Msa0483860 | 0.815464 | 9.121701e-52 | -8.615850e-47 |
| Msa0136100 | Msa0483860 | 0.809800 | 1.581995e-50 | -8.615850e-47 |
| Msa0140570 | Msa0483860 | 0.842394 | 2.656202e-58 | -8.615850e-47 |
| Msa0140780 | Msa0483860 | 0.806703 | 7.230393e-50 | -8.615850e-47 |
| Msa0142660 | Msa0483860 | 0.804314 | 2.292232e-49 | -8.615850e-47 |
| Msa0143430 | Msa0483860 | 0.802994 | 4.308066e-49 | -8.615850e-47 |
| Msa0145440 | Msa0483860 | 0.808213 | 3.459343e-50 | -8.615850e-47 |
| Msa0147560 | Msa0483860 | 0.802133 | 6.483211e-49 | -8.615850e-47 |
| Msa0150820 | Msa0483860 | 0.813207 | 2.877100e-51 | -8.615850e-47 |
| Msa0153420 | Msa0483860 | 0.805932 | 1.051518e-49 | -8.615850e-47 |
| Msa0157100 | Msa0483860 | 0.804079 | 2.565305e-49 | -8.615850e-47 |
| Msa0157290 | Msa0483860 | 0.840441 | 8.680328e-58 | -8.615850e-47 |
| Msa0160550 | Msa0483860 | 0.832997 | 6.868854e-56 | -8.615850e-47 |
| Msa0173740 | Msa0483860 | 0.812382 | 4.361414e-51 | -8.615850e-47 |
| Msa0173820 | Msa0483860 | 0.808285 | 3.338151e-50 | -8.615850e-47 |
| Msa0173990 | Msa0483860 | 0.834854 | 2.355930e-56 | -8.615850e-47 |
| Msa0184960 | Msa0483860 | 0.809523 | 1.813864e-50 | -8.615850e-47 |
| Msa0191050 | Msa0483860 | 0.808142 | 3.580978e-50 | -8.615850e-47 |
| Msa0193120 | Msa0483860 | 0.832044 | 1.183118e-55 | -8.615850e-47 |
| Msa0195460 | Msa0483860 | 0.803390 | 3.566597e-49 | -8.615850e-47 |
| Msa0195720 | Msa0483860 | 0.808232 | 3.426329e-50 | -8.615850e-47 |
| Msa0197660 | Msa0483860 | 0.802231 | 6.188621e-49 | -8.615850e-47 |
| Msa0197930 | Msa0483860 | 0.800488 | 1.407725e-48 | -8.615850e-47 |
| Msa0203030 | Msa0483860 | 0.805373 | 1.377480e-49 | -8.615850e-47 |
| Msa0220720 | Msa0483860 | 0.819218 | 1.303346e-52 | -8.615850e-47 |
| Msa0222620 | Msa0483860 | 0.812755 | 3.613794e-51 | -8.615850e-47 |
| Msa0225740 | Msa0483860 | 0.807140 | 5.846645e-50 | -8.615850e-47 |
| Msa0233350 | Msa0483860 | 0.817579 | 3.064843e-52 | -8.615850e-47 |
| Msa0237260 | Msa0483860 | 0.804827 | 1.791776e-49 | -8.615850e-47 |
| Msa0372660 | Msa0483860 | 0.809510 | 1.826269e-50 | -8.615850e-47 |
| Msa0372670 | Msa0483860 | 0.800174 | 1.631096e-48 | -8.615850e-47 |
| Msa0380740 | Msa0483860 | 0.811703 | 6.131228e-51 | -8.615850e-47 |
| Msa0381550 | Msa0483860 | 0.804659 | 1.942548e-49 | -8.615850e-47 |
| Msa0385580 | Msa0483860 | 0.827151 | 1.833143e-54 | -8.615850e-47 |
| Msa0395960 | Msa0483860 | 0.805115 | 1.560217e-49 | -8.615850e-47 |
| Msa0398710 | Msa0483860 | 0.828447 | 8.947649e-55 | -8.615850e-47 |
| Msa0402330 | Msa0483860 | 0.804543 | 2.054011e-49 | -8.615850e-47 |
| Msa0402650 | Msa0483860 | 0.818617 | 1.785472e-52 | -8.615850e-47 |
| Msa0419820 | Msa0483860 | 0.826421 | 2.737535e-54 | -8.615850e-47 |
| Msa0424920 | Msa0483860 | 0.815280 | 1.002389e-51 | -8.615850e-47 |
| Msa0425010 | Msa0483860 | 0.802828 | 4.662263e-49 | -8.615850e-47 |
| Msa0430620 | Msa0483860 | 0.801867 | 7.351534e-49 | -8.615850e-47 |
| Msa0433640 | Msa0483860 | 0.806819 | 6.835442e-50 | -8.615850e-47 |
| Msa0443500 | Msa0483860 | 0.805390 | 1.365999e-49 | -8.615850e-47 |
| Msa0479660 | Msa0483860 | 0.818870 | 1.564252e-52 | -8.615850e-47 |
| Msa0481530 | Msa0483860 | 0.804071 | 2.576111e-49 | -8.615850e-47 |
| Msa0239800 | Msa0483860 | 0.804414 | 2.185468e-49 | -8.615850e-47 |
| Msa0243100 | Msa0483860 | 0.813180 | 2.916827e-51 | -8.615850e-47 |
| Msa0249690 | Msa0483860 | 0.802368 | 5.798508e-49 | -8.615850e-47 |
| Msa0262310 | Msa0483860 | 0.808414 | 3.134339e-50 | -8.615850e-47 |
| Msa0264150 | Msa0483860 | 0.821726 | 3.463147e-53 | -8.615850e-47 |
| Msa0264570 | Msa0483860 | 0.816369 | 5.730239e-52 | -8.615850e-47 |
| Msa0279790 | Msa0483860 | 0.818597 | 1.804320e-52 | -8.615850e-47 |
| Msa0280610 | Msa0483860 | 0.811603 | 6.445002e-51 | -8.615850e-47 |
| Msa0287650 | Msa0483860 | 0.811275 | 7.594717e-51 | -8.615850e-47 |
| Msa0299870 | Msa0483860 | 0.809355 | 1.971075e-50 | -8.615850e-47 |
| Msa0309770 | Msa0483860 | 0.808336 | 3.255844e-50 | -8.615850e-47 |
| Msa0311860 | Msa0483860 | 0.802665 | 5.036103e-49 | -8.615850e-47 |
| Msa0317510 | Msa0483860 | 0.801595 | 8.360741e-49 | -8.615850e-47 |
| Msa0320100 | Msa0483860 | 0.818660 | 1.745714e-52 | -8.615850e-47 |
| Msa0336420 | Msa0483860 | 0.818868 | 1.565425e-52 | -8.615850e-47 |
| Msa0337240 | Msa0483860 | 0.806433 | 8.244065e-50 | -8.615850e-47 |
| Msa0339250 | Msa0483860 | 0.823411 | 1.405412e-53 | -8.615850e-47 |
| Msa0342360 | Msa0483860 | 0.804614 | 1.985145e-49 | -8.615850e-47 |
| Msa0355270 | Msa0483860 | 0.805997 | 1.018665e-49 | -8.615850e-47 |
| Msa0358170 | Msa0483860 | 0.808017 | 3.807060e-50 | -8.615850e-47 |
| Msa0483860 | Msa0497490 | 0.808754 | 2.650913e-50 | -8.615850e-47 |
| Msa0483860 | Msa0500360 | 0.836758 | 7.756735e-57 | -8.615850e-47 |
| Msa0483860 | Msa0501460 | 0.805238 | 1.470310e-49 | -8.615850e-47 |
| Msa0483860 | Msa0507680 | 0.806335 | 8.647609e-50 | -8.615850e-47 |
| Msa0483860 | Msa0509390 | 0.805900 | 1.067465e-49 | -8.615850e-47 |
| Msa0483860 | Msa0516320 | 0.832558 | 8.826602e-56 | -8.615850e-47 |
| Msa0483860 | Msa0517330 | 0.818166 | 2.259009e-52 | -8.615850e-47 |
| Msa0483860 | Msa0520070 | 0.807930 | 3.974386e-50 | -8.615850e-47 |
| Msa0483860 | Msa0521500 | 0.804264 | 2.347878e-49 | -8.615850e-47 |
| Msa0483860 | Msa0523270 | 0.803291 | 3.739848e-49 | -8.615850e-47 |
| Msa0483860 | Msa0529680 | 0.807171 | 5.756928e-50 | -8.615850e-47 |
| Msa0483860 | Msa0531430 | 0.819394 | 1.188368e-52 | -8.615850e-47 |
| Msa0483860 | Msa0534590 | 0.800778 | 1.228822e-48 | -8.615850e-47 |
| Msa0483860 | Msa0541860 | 0.800064 | 1.717611e-48 | -8.615850e-47 |
| Msa0483860 | Msa0547720 | 0.801354 | 9.366513e-49 | -8.615850e-47 |
| Msa0483860 | Msa0555450 | 0.810723 | 1.000347e-50 | -8.615850e-47 |
| Msa0483860 | Msa0568820 | 0.807067 | 6.056269e-50 | -8.615850e-47 |
| Msa0483860 | Msa0571140 | 0.814696 | 1.350833e-51 | -8.615850e-47 |
| Msa0483860 | Msa0590800 | 0.809622 | 1.727684e-50 | -8.615850e-47 |
| Msa0483860 | Msa0597330 | 0.818745 | 1.669522e-52 | -8.615850e-47 |
| Msa0483860 | Msa0601850 | 0.813917 | 2.008007e-51 | -8.615850e-47 |
| Msa0483860 | Msa0607050 | 0.826386 | 2.790887e-54 | -8.615850e-47 |
| Msa0483860 | Msa0610430 | 0.820546 | 6.479798e-53 | -8.615850e-47 |
| Msa0483860 | Msa0611380 | 0.808405 | 3.147099e-50 | -8.615850e-47 |
| Msa0483860 | Msa0616020 | 0.806167 | 9.380933e-50 | -8.615850e-47 |
| Msa0483860 | Msa0616220 | 0.829910 | 3.952336e-55 | -8.615850e-47 |
| Msa0483860 | Msa0619070 | 0.805815 | 1.112640e-49 | -8.615850e-47 |
| Msa0483860 | Msa0620240 | 0.814297 | 1.655073e-51 | -8.615850e-47 |
| Msa0483860 | Msa0621490 | 0.806201 | 9.230107e-50 | -8.615850e-47 |
| Msa0483860 | Msa0623700 | 0.812959 | 3.261313e-51 | -8.615850e-47 |
| Msa0483860 | Msa0631120 | 0.815243 | 1.021270e-51 | -8.615850e-47 |
| Msa0483860 | Msa0633840 | 0.806477 | 8.070808e-50 | -8.615850e-47 |
| Msa0483860 | Msa0647500 | 0.816188 | 6.290816e-52 | -8.615850e-47 |
| Msa0483860 | Msa0657970 | 0.828723 | 7.670860e-55 | -8.615850e-47 |
| Msa0483860 | Msa0661190 | -0.809299 | 2.026557e-50 | -8.615850e-47 |
| Msa0483860 | Msa0662500 | 0.832340 | 9.997119e-56 | -8.615850e-47 |
| Msa0483860 | Msa0663390 | 0.805893 | 1.071579e-49 | -8.615850e-47 |
| Msa0483860 | Msa0682900 | 0.804373 | 2.228103e-49 | -8.615850e-47 |
| Msa0483860 | Msa0690150 | 0.829345 | 5.423264e-55 | -8.615850e-47 |
| Msa0483860 | Msa0696640 | 0.800408 | 1.461579e-48 | -8.615850e-47 |
| Msa0483860 | Msa0697670 | 0.803774 | 2.969049e-49 | -8.615850e-47 |
| Msa0483860 | Msa0699550 | 0.829855 | 4.074420e-55 | -8.615850e-47 |
| Msa0483860 | Msa0703230 | 0.801283 | 9.684909e-49 | -8.615850e-47 |
| Msa0483860 | Msa0708520 | 0.825680 | 4.106956e-54 | -8.615850e-47 |
| Msa0483860 | Msa0709500 | 0.863393 | 2.569984e-64 | -8.615850e-47 |
| Msa0483860 | Msa0716840 | 0.803891 | 2.807686e-49 | -8.615850e-47 |
| Msa0483860 | Msa0717260 | 0.803795 | 2.939334e-49 | -8.615850e-47 |
| Msa0483860 | Msa0720820 | 0.815633 | 8.366937e-52 | -8.615850e-47 |
| Msa0483860 | Msa0724830 | 0.812946 | 3.281586e-51 | -8.615850e-47 |
| Msa0483860 | Msa0734660 | 0.830262 | 3.242102e-55 | -8.615850e-47 |
| Msa0483860 | Msa0738630 | -0.828449 | 8.937531e-55 | -8.615850e-47 |
| Msa0483860 | Msa0743720 | 0.818559 | 1.840155e-52 | -8.615850e-47 |
| Msa0483860 | Msa0750880 | 0.802856 | 4.600832e-49 | -8.615850e-47 |
| Msa0483860 | Msa0761940 | 0.822395 | 2.424178e-53 | -8.615850e-47 |
| Msa0483860 | Msa0763070 | 0.802337 | 5.886485e-49 | -8.615850e-47 |
| Msa0483860 | Msa0765380 | 0.803622 | 3.192313e-49 | -8.615850e-47 |
| Msa0483860 | Msa0776220 | 0.806313 | 8.742040e-50 | -8.615850e-47 |
| Msa0483860 | Msa0783760 | -0.822340 | 2.496704e-53 | -8.615850e-47 |
| Msa0483860 | Msa0790660 | -0.808731 | 2.681362e-50 | -8.615850e-47 |
| Msa0483860 | Msa0790850 | 0.859999 | 2.802650e-63 | -8.615850e-47 |
| Msa0483860 | Msa0790990 | 0.800551 | 1.366817e-48 | -8.615850e-47 |
| Msa0483860 | Msa0794670 | 0.805604 | 1.231823e-49 | -8.615850e-47 |
| Msa0483860 | Msa0796530 | 0.844143 | 9.075188e-59 | -8.615850e-47 |
| Msa0483860 | Msa0803890 | 0.824580 | 7.472991e-54 | -8.615850e-47 |
| Msa0483860 | Msa0808270 | 0.813790 | 2.141044e-51 | -8.615850e-47 |
| Msa0483860 | Msa0813670 | 0.833726 | 4.518159e-56 | -8.615850e-47 |
| Msa0483860 | Msa0813720 | 0.815941 | 7.140506e-52 | -8.615850e-47 |
| Msa0483860 | Msa0813740 | 0.804587 | 2.010898e-49 | -8.615850e-47 |
| Msa0483860 | Msa0818980 | -0.824521 | 7.716953e-54 | -8.615850e-47 |
| Msa0483860 | Msa0819030 | -0.831825 | 1.340355e-55 | -8.615850e-47 |
| Msa0483860 | Msa0824680 | 0.822851 | 1.898601e-53 | -8.615850e-47 |
| Msa0483860 | Msa0841940 | 0.811837 | 5.733745e-51 | -8.615850e-47 |
| Msa0483860 | Msa0853540 | 0.806215 | 9.164559e-50 | -8.615850e-47 |
| Msa0483860 | Msa0858840 | 0.801333 | 9.462330e-49 | -8.615850e-47 |
| Msa0483860 | Msa0867050 | -0.804855 | 1.767520e-49 | -8.615850e-47 |
| Msa0483860 | Msa0867220 | 0.815039 | 1.133675e-51 | -8.615850e-47 |
| Msa0483860 | Msa0871270 | 0.808162 | 3.546579e-50 | -8.615850e-47 |
| Msa0483860 | Msa0876200 | 0.844173 | 8.909219e-59 | -8.615850e-47 |
| Msa0483860 | Msa0878500 | 0.810497 | 1.119127e-50 | -8.615850e-47 |
| Msa0483860 | Msa0880140 | 0.841377 | 4.931514e-58 | -8.615850e-47 |
| Msa0483860 | Msa0880440 | 0.809072 | 2.266832e-50 | -8.615850e-47 |
| Msa0483860 | Msa0888530 | 0.801952 | 7.061376e-49 | -8.615850e-47 |
| Msa0483860 | Msa0902760 | 0.842141 | 3.099626e-58 | -8.615850e-47 |
| Msa0483860 | Msa0944190 | 0.819533 | 1.104723e-52 | -8.615850e-47 |
| Msa0483860 | Msa0968590 | 0.826322 | 2.891271e-54 | -8.615850e-47 |
| Msa0483860 | Msa0968680 | 0.810922 | 9.056380e-51 | -8.615850e-47 |
| Msa0483860 | Msa0970030 | 0.840371 | 9.050568e-58 | -8.615850e-47 |
| Msa0483860 | Msa0979010 | 0.803699 | 3.077128e-49 | -8.615850e-47 |
| Msa0483860 | Msa0993290 | 0.816034 | 6.807713e-52 | -8.615850e-47 |
| Msa0483860 | Msa0993600 | 0.818448 | 1.950370e-52 | -8.615850e-47 |
| Msa0483860 | Msa1003310 | 0.871745 | 5.407565e-67 | -8.615850e-47 |
| Msa0483860 | Msa1003630 | 0.814629 | 1.397484e-51 | -8.615850e-47 |
| Msa0483860 | Msa1003750 | 0.854025 | 1.619663e-61 | -8.615850e-47 |
| Msa0483860 | Msa1006840 | 0.805130 | 1.548703e-49 | -8.615850e-47 |
| Msa0483860 | Msa1007610 | -0.810106 | 1.359238e-50 | -8.615850e-47 |
| Msa0483860 | Msa1010110 | 0.807508 | 4.885484e-50 | -8.615850e-47 |
| Msa0483860 | Msa1013400 | 0.853218 | 2.762720e-61 | -8.615850e-47 |
| Msa0483860 | Msa1023400 | 0.815661 | 8.246567e-52 | -8.615850e-47 |
| Msa0483860 | Msa1040400 | 0.846827 | 1.700599e-59 | -8.615850e-47 |
| Msa0483860 | Msa1046470 | 0.930883 | 8.544797e-94 | -8.615850e-47 |
| Msa0483860 | Msa1066490 | 0.814704 | 1.345393e-51 | -8.615850e-47 |
| Msa0483860 | Msa1079590 | 0.802178 | 6.345740e-49 | -8.615850e-47 |
| Msa0483860 | Msa1081150 | 0.827927 | 1.193551e-54 | -8.615850e-47 |
| Msa0483860 | Msa1082500 | 0.804657 | 1.944570e-49 | -8.615850e-47 |
| Msa0483860 | Msa1082700 | 0.803242 | 3.828351e-49 | -8.615850e-47 |
| Msa0483860 | Msa1083150 | 0.833078 | 6.556174e-56 | -8.615850e-47 |
| Msa0483860 | Msa1093530 | 0.840466 | 8.549265e-58 | -8.615850e-47 |
| Msa0483860 | Msa1104140 | 0.802617 | 5.154220e-49 | -8.615850e-47 |
| Msa0483860 | Msa1111630 | 0.803638 | 3.167917e-49 | -8.615850e-47 |
| Msa0483860 | Msa1125760 | 0.864084 | 1.568456e-64 | -8.615850e-47 |
| Msa0483860 | Msa1127890 | 0.820200 | 7.778386e-53 | -8.615850e-47 |
| Msa0483860 | Msa1133000 | 0.814924 | 1.202747e-51 | -8.615850e-47 |
| Msa0483860 | Msa1134110 | 0.809607 | 1.740879e-50 | -8.615850e-47 |
| Msa0483860 | Msa1139810 | 0.826296 | 2.932855e-54 | -8.615850e-47 |
| Msa0483860 | Msa1147900 | 0.813545 | 2.424893e-51 | -8.615850e-47 |
| Msa0483860 | Msa1165870 | 0.816528 | 5.280577e-52 | -8.615850e-47 |
| Msa0483860 | Msa1171360 | 0.861965 | 7.081719e-64 | -8.615850e-47 |
| Msa0483860 | Msa1172670 | 0.818827 | 1.600073e-52 | -8.615850e-47 |
| Msa0483860 | Msa1179460 | 0.810836 | 9.456822e-51 | -8.615850e-47 |
| Msa0483860 | Msa1187840 | 0.850450 | 1.685228e-60 | -8.615850e-47 |
| Msa0483860 | Msa1194030 | 0.800097 | 1.691289e-48 | -8.615850e-47 |
| Msa0483860 | Msa1203250 | 0.813270 | 2.785909e-51 | -8.615850e-47 |
| Msa0483860 | Msa1207270 | 0.820082 | 8.274821e-53 | -8.615850e-47 |
| Msa0483860 | Msa1209460 | 0.808579 | 2.889782e-50 | -8.615850e-47 |
| Msa0483860 | Msa1211890 | 0.806270 | 8.923187e-50 | -8.615850e-47 |
| Msa0483860 | Msa1218600 | 0.847228 | 1.320208e-59 | -8.615850e-47 |
| Msa0483860 | Msa1237940 | 0.812327 | 4.483161e-51 | -8.615850e-47 |
| Msa0483860 | Msa1238930 | 0.815400 | 9.426301e-52 | -8.615850e-47 |
| Msa0483860 | Msa1255040 | -0.831877 | 1.301340e-55 | -8.615850e-47 |
| Msa0483860 | Msa1275360 | 0.802143 | 6.451156e-49 | -8.615850e-47 |
| Msa0483860 | Msa1275540 | 0.807392 | 5.170198e-50 | -8.615850e-47 |
| Msa0483860 | Msa1281180 | 0.810529 | 1.101890e-50 | -8.615850e-47 |
| Msa0483860 | Msa1283170 | 0.814697 | 1.350264e-51 | -8.615850e-47 |
| Msa0483860 | Msa1294480 | 0.801909 | 7.208666e-49 | -8.615850e-47 |
| Msa0483860 | Msa1316780 | 0.826968 | 2.026874e-54 | -8.615850e-47 |
| Msa0483860 | Msa1316830 | 0.824692 | 7.033801e-54 | -8.615850e-47 |
| Msa0483860 | Msa1353060 | 0.805792 | 1.124790e-49 | -8.615850e-47 |
| Msa0483860 | Msa1356440 | 0.841518 | 4.527607e-58 | -8.615850e-47 |
| Msa0483860 | Msa1385670 | 0.810496 | 1.120110e-50 | -8.615850e-47 |
| Msa0483860 | Msa1397810 | 0.814704 | 1.345077e-51 | -8.615850e-47 |
| Msa0483860 | Msa1410430 | -0.806336 | 8.644949e-50 | -8.615850e-47 |
| Msa0483860 | Msa1411070 | 0.838181 | 3.349329e-57 | -8.615850e-47 |
| Msa0483860 | Msa1417870 | 0.835652 | 1.481314e-56 | -8.615850e-47 |
| Msa0483860 | Msa1424750 | 0.814446 | 1.534056e-51 | -8.615850e-47 |
| Msa0483860 | Msa1426030 | 0.806694 | 7.264454e-50 | -8.615850e-47 |
| Msa0483860 | Msa1457440 | 0.830862 | 2.312515e-55 | -8.615850e-47 |
| Msa0483860 | Msa1457920 | 0.820653 | 6.121035e-53 | -8.615850e-47 |
| Msa0483860 | Msa1466300 | 0.809345 | 1.981071e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483860 | MtrunA17_Chr4g0001531 | 100.000 | 57 | 0 | 0 | 1 | 57 | 1 | 57 | 7.78e-39 | 122 |
| Msa0483860 | MtrunA17_Chr7g0214441 | 100.000 | 57 | 0 | 0 | 1 | 57 | 1 | 57 | 7.78e-39 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483860 | AT3G05870.1 | 100.000 | 56 | 0 | 0 | 1 | 56 | 31 | 86 | 5.19e-38 | 120 |
| Msa0483860 | AT3G05870.2 | 100.000 | 56 | 0 | 0 | 1 | 56 | 31 | 86 | 5.19e-38 | 120 |
| Msa0483860 | AT3G05870.6 | 100.000 | 56 | 0 | 0 | 1 | 56 | 31 | 86 | 5.19e-38 | 120 |
| Msa0483860 | AT3G05870.4 | 100.000 | 56 | 0 | 0 | 1 | 56 | 34 | 89 | 6.68e-38 | 120 |
| Msa0483860 | AT3G05870.3 | 100.000 | 56 | 0 | 0 | 1 | 56 | 34 | 89 | 6.68e-38 | 120 |
| Msa0483860 | AT3G05870.5 | 100.000 | 56 | 0 | 0 | 1 | 56 | 34 | 89 | 6.68e-38 | 120 |
| Msa0483860 | AT3G05870.7 | 100.000 | 56 | 0 | 0 | 1 | 56 | 22 | 77 | 9.44e-38 | 120 |
Find 40 sgRNAs with CRISPR-Local
Find 137 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATTTGATCATTTCTAT+TGG | 0.277487 | 3_4:-688858 | Msa0483860:three_prime_UTR |
| TGAAATTAGAGTTTCTAAAT+TGG | 0.278981 | 3_4:-688778 | Msa0483860:three_prime_UTR |
| CGTCGGGAATGGCAATTTAA+AGG | 0.290239 | 3_4:-688974 | Msa0483860:CDS |
| ATTTACATTGTATCTTGAAA+TGG | 0.311304 | 3_4:-689036 | Msa0483860:CDS |
| CTGATAATGAAGTTAGGGTT+TGG | 0.352667 | 3_4:+691121 | None:intergenic |
| GATGGCATGTTGTTGCTTCA+TGG | 0.372099 | 3_4:-690799 | Msa0483860:five_prime_UTR |
| ATGTTGTTGCTTCATGGACT+TGG | 0.375530 | 3_4:-690793 | Msa0483860:five_prime_UTR |
| TGTCCTGATTGTAAACTTCC+TGG | 0.394301 | 3_4:-690719 | Msa0483860:CDS |
| ATACATACGTTTGAATTTGC+GGG | 0.399310 | 3_4:-691223 | Msa0483860:five_prime_UTR |
| AAAGAAGATTTGAATTGAAA+AGG | 0.400354 | 3_4:+691147 | None:intergenic |
| CTATTGGATTGGATTTCTGC+TGG | 0.407759 | 3_4:-691000 | Msa0483860:five_prime_UTR |
| TTTACATTGTATCTTGAAAT+GGG | 0.412787 | 3_4:-689035 | Msa0483860:CDS |
| TAATATCTCCATTGTTTCCA+TGG | 0.415568 | 3_4:-688804 | Msa0483860:three_prime_UTR |
| TATACATACGTTTGAATTTG+CGG | 0.415740 | 3_4:-691224 | Msa0483860:five_prime_UTR |
| ATTTGTAGGATGGCCTTTGA+TGG | 0.417636 | 3_4:-690746 | Msa0483860:exon |
| GCCATTCCCGACGACACATT+GGG | 0.449214 | 3_4:+688984 | None:intergenic |
| GTCCTGATTGTAAACTTCCT+GGG | 0.462403 | 3_4:-690718 | Msa0483860:CDS |
| AAACTCTAATTTCAATCCCA+TGG | 0.474150 | 3_4:+688787 | None:intergenic |
| ACTAGACAAGACAAAGGAAA+AGG | 0.484810 | 3_4:-691200 | Msa0483860:five_prime_UTR |
| ATGAAACATGTGGAATTTGT+AGG | 0.488299 | 3_4:-690760 | Msa0483860:five_prime_UTR |
| TTTGAAGCAAAAGCACAAAC+AGG | 0.490100 | 3_4:+691051 | None:intergenic |
| TGCCATTCCCGACGACACAT+TGG | 0.494237 | 3_4:+688983 | None:intergenic |
| GCCCAATGTGTCGTCGGGAA+TGG | 0.498823 | 3_4:-688985 | Msa0483860:CDS |
| TGTTGTTGCTTCATGGACTT+GGG | 0.505473 | 3_4:-690792 | Msa0483860:five_prime_UTR |
| AATATCTCCATTGTTTCCAT+GGG | 0.512610 | 3_4:-688803 | Msa0483860:three_prime_UTR |
| CACATTGCCCAATGTGTCGT+CGG | 0.513658 | 3_4:-688991 | Msa0483860:CDS |
| TCCCCAGGAAGTTTACAATC+AGG | 0.518100 | 3_4:+690716 | None:intergenic |
| CATTGGGCAATGTGCTTGTG+AGG | 0.523053 | 3_4:+689000 | None:intergenic |
| TTTCAATCCCATGGAAACAA+TGG | 0.523838 | 3_4:+688796 | None:intergenic |
| GGATGTATTGCTTATGAATG+AGG | 0.540581 | 3_4:-688837 | Msa0483860:three_prime_UTR |
| ACATTGCCCAATGTGTCGTC+GGG | 0.540781 | 3_4:-688990 | Msa0483860:CDS |
| TTCATGGACTTGGGATGCAC+AGG | 0.541212 | 3_4:-690783 | Msa0483860:five_prime_UTR |
| GATTTGAATTGAAAAGGAGA+AGG | 0.548938 | 3_4:+691153 | None:intergenic |
| TCCTGATTGTAAACTTCCTG+GGG | 0.574605 | 3_4:-690717 | Msa0483860:CDS |
| CTGAGTGGACAGTCATCCCC+AGG | 0.578584 | 3_4:+690701 | None:intergenic |
| ATCAGGACAGCATCCATCAA+AGG | 0.590910 | 3_4:+690733 | None:intergenic |
| CTAGACAAGACAAAGGAAAA+GGG | 0.599308 | 3_4:-691199 | Msa0483860:five_prime_UTR |
| TGCGGGACTAGACAAGACAA+AGG | 0.697609 | 3_4:-691206 | Msa0483860:five_prime_UTR |
| AACATGTGGAATTTGTAGGA+TGG | 0.713439 | 3_4:-690756 | Msa0483860:exon |
| GATGCACAGGATGAAACATG+TGG | 0.727134 | 3_4:-690770 | Msa0483860:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAACTAATGAATAAATATT+AGG | + | chr3_4:689082-689101 | None:intergenic | 15.0% |
| !! | TCATTCAATAAAATAAACAA+TGG | + | chr3_4:689726-689745 | None:intergenic | 15.0% |
| !! | TTATCTAAATGTTAAAACAA+AGG | + | chr3_4:689752-689771 | None:intergenic | 15.0% |
| !! | AATATATTATTTGATATGTC+AGG | + | chr3_4:690813-690832 | None:intergenic | 15.0% |
| !! | AAAGAAGATTTGAATTGAAA+AGG | + | chr3_4:688801-688820 | None:intergenic | 20.0% |
| !!! | ATTTTCTGATAATGAAGTTA+GGG | + | chr3_4:688832-688851 | None:intergenic | 20.0% |
| !!! | AATAAATTAAAAGCACAAAC+AGG | + | chr3_4:689384-689403 | None:intergenic | 20.0% |
| !! | TTGTTTGTATAAAGTGAAAA+GGG | + | chr3_4:689555-689574 | None:intergenic | 20.0% |
| !! | ATTGTTTGTATAAAGTGAAA+AGG | + | chr3_4:689556-689575 | None:intergenic | 20.0% |
| !! | TAAAATAGTAAACTCTCATT+TGG | - | chr3_4:689610-689629 | Msa0483860:intron | 20.0% |
| !! | AGAAGAATCAACATAAATTT+CGG | + | chr3_4:690116-690135 | None:intergenic | 20.0% |
| !! | TACATTCAGTAAAATTAGAA+AGG | + | chr3_4:690465-690484 | None:intergenic | 20.0% |
| !! | ATTTACATTGTATCTTGAAA+TGG | - | chr3_4:690909-690928 | Msa0483860:intron | 20.0% |
| !! | TTTACATTGTATCTTGAAAT+GGG | - | chr3_4:690910-690929 | Msa0483860:intron | 20.0% |
| !!! | CAATGTAATTTTGTTTTTCA+TGG | - | chr3_4:691010-691029 | Msa0483860:five_prime_UTR | 20.0% |
| !!! | AAGTAACTAAGATCTTTTTA+AGG | - | chr3_4:691060-691079 | Msa0483860:five_prime_UTR | 20.0% |
| !!! | AGTAACTAAGATCTTTTTAA+GGG | - | chr3_4:691061-691080 | Msa0483860:five_prime_UTR | 20.0% |
| !! | TGTAATTTGATCATTTCTAT+TGG | - | chr3_4:691087-691106 | Msa0483860:five_prime_UTR | 20.0% |
| !! | TGAAATTAGAGTTTCTAAAT+TGG | - | chr3_4:691167-691186 | Msa0483860:five_prime_UTR | 20.0% |
| !!! | ATATATTTTTTCATCCTTTG+TGG | + | chr3_4:691209-691228 | None:intergenic | 20.0% |
| ! | TATACATACGTTTGAATTTG+CGG | - | chr3_4:688721-688740 | Msa0483860:three_prime_UTR | 25.0% |
| !!! | CATTTTCTGATAATGAAGTT+AGG | + | chr3_4:688833-688852 | None:intergenic | 25.0% |
| ! | ATCTCTAACTAACTTTATAC+AGG | - | chr3_4:688984-689003 | Msa0483860:CDS | 25.0% |
| !!! | AATATTAGGTTGATTTCACT+AGG | + | chr3_4:689068-689087 | None:intergenic | 25.0% |
| ! | TCAGTAAGTTACATTATCTT+GGG | - | chr3_4:689263-689282 | Msa0483860:intron | 25.0% |
| ! | GTCATTGAAATATGTTGAAA+TGG | - | chr3_4:689463-689482 | Msa0483860:intron | 25.0% |
| ! | TGAAAAGGGTTAATTCTTAT+TGG | + | chr3_4:689541-689560 | None:intergenic | 25.0% |
| ! | TCATGGTAACATATATATCA+CGG | + | chr3_4:689811-689830 | None:intergenic | 25.0% |
| ! | ACTAATTTCATCAATATTCC+AGG | - | chr3_4:689964-689983 | Msa0483860:intron | 25.0% |
| ! | AACATTCTTCTTAACAGAAT+AGG | - | chr3_4:690067-690086 | Msa0483860:intron | 25.0% |
| ! | AATGGATGAGATACTTTAAA+GGG | + | chr3_4:690166-690185 | None:intergenic | 25.0% |
| ! | AAATGGATGAGATACTTTAA+AGG | + | chr3_4:690167-690186 | None:intergenic | 25.0% |
| !!! | TAAAGTATCTCATCCATTTT+TGG | - | chr3_4:690168-690187 | Msa0483860:intron | 25.0% |
| ! | TTTACCACGTCATTAATATA+TGG | - | chr3_4:690248-690267 | Msa0483860:intron | 25.0% |
| ! | TTACCACGTCATTAATATAT+GGG | - | chr3_4:690249-690268 | Msa0483860:intron | 25.0% |
| ! | ATACCTATAAACAACATTTG+TGG | - | chr3_4:690496-690515 | Msa0483860:intron | 25.0% |
| !! | AAACCACAAATGTTGTTTAT+AGG | + | chr3_4:690502-690521 | None:intergenic | 25.0% |
| !! | TTTATAAAGCTTTATGCTCA+AGG | - | chr3_4:690593-690612 | Msa0483860:intron | 25.0% |
| !!! | CATGATTGAGAATTTTTCAA+GGG | - | chr3_4:690634-690653 | Msa0483860:intron | 25.0% |
| !!! | TTTGTTTTTCATGGAAAACT+AGG | - | chr3_4:691019-691038 | Msa0483860:five_prime_UTR | 25.0% |
| !!! | TTGTTTTTCATGGAAAACTA+GGG | - | chr3_4:691020-691039 | Msa0483860:five_prime_UTR | 25.0% |
| ATACATACGTTTGAATTTGC+GGG | - | chr3_4:688722-688741 | Msa0483860:three_prime_UTR | 30.0% | |
| GATTTGAATTGAAAAGGAGA+AGG | + | chr3_4:688795-688814 | None:intergenic | 30.0% | |
| GGTTGAATGCAAAAATGAAA+AGG | + | chr3_4:688876-688895 | None:intergenic | 30.0% | |
| !! | TGACTTAGTTTTCTCTCTAT+TGG | - | chr3_4:688929-688948 | Msa0483860:three_prime_UTR | 30.0% |
| ! | TAGTTTTCTCTCTATTGGAT+TGG | - | chr3_4:688934-688953 | Msa0483860:three_prime_UTR | 30.0% |
| CTAACTTTATACAGGTTGTT+TGG | - | chr3_4:688992-689011 | Msa0483860:CDS | 30.0% | |
| CTTATCTCATCAAATGTAGA+TGG | - | chr3_4:689128-689147 | Msa0483860:intron | 30.0% | |
| ATGAAACATGTGGAATTTGT+AGG | - | chr3_4:689185-689204 | Msa0483860:intron | 30.0% | |
| AGATAATGTAACTTACTGAG+TGG | + | chr3_4:689262-689281 | None:intergenic | 30.0% | |
| CTCAGTAAGTTACATTATCT+TGG | - | chr3_4:689262-689281 | Msa0483860:intron | 30.0% | |
| ATTATCTTGGGATTTGTCTT+TGG | - | chr3_4:689275-689294 | Msa0483860:intron | 30.0% | |
| AATTCAGCACAATAGAAAAG+TGG | + | chr3_4:689436-689455 | None:intergenic | 30.0% | |
| !! | CTTATAAGAGTGTTATGAAG+TGG | - | chr3_4:689587-689606 | Msa0483860:intron | 30.0% |
| TAGTAAACTCTCATTTGGAT+TGG | - | chr3_4:689615-689634 | Msa0483860:intron | 30.0% | |
| ATGGAATTTAACAACACTTC+AGG | + | chr3_4:689707-689726 | None:intergenic | 30.0% | |
| AACATATATATCACGGTAGT+TGG | + | chr3_4:689804-689823 | None:intergenic | 30.0% | |
| ACAATTGCATGATAGTTTCA+TGG | + | chr3_4:689828-689847 | None:intergenic | 30.0% | |
| AAATAGATGCTGTAAAAAGC+AGG | - | chr3_4:689879-689898 | Msa0483860:intron | 30.0% | |
| AATAGATGCTGTAAAAAGCA+GGG | - | chr3_4:689880-689899 | Msa0483860:intron | 30.0% | |
| ! | GTACTTATTGGTTATGTTGT+AGG | + | chr3_4:690024-690043 | None:intergenic | 30.0% |
| GAACAAAATTAGGCCAAAAA+TGG | + | chr3_4:690184-690203 | None:intergenic | 30.0% | |
| AAACCCATATATTAATGACG+TGG | + | chr3_4:690255-690274 | None:intergenic | 30.0% | |
| !!! | GATTTTTAGTTGAAACCAGT+TGG | + | chr3_4:690318-690337 | None:intergenic | 30.0% |
| ! | AATGTTGTTTATAGGTATCC+AGG | + | chr3_4:690494-690513 | None:intergenic | 30.0% |
| ! | GCATGATTGAGAATTTTTCA+AGG | - | chr3_4:690633-690652 | Msa0483860:intron | 30.0% |
| TAATATCTCCATTGTTTCCA+TGG | - | chr3_4:691141-691160 | Msa0483860:five_prime_UTR | 30.0% | |
| AATATCTCCATTGTTTCCAT+GGG | - | chr3_4:691142-691161 | Msa0483860:five_prime_UTR | 30.0% | |
| AAACTCTAATTTCAATCCCA+TGG | + | chr3_4:691161-691180 | None:intergenic | 30.0% | |
| ACTAGACAAGACAAAGGAAA+AGG | - | chr3_4:688745-688764 | Msa0483860:three_prime_UTR | 35.0% | |
| CTAGACAAGACAAAGGAAAA+GGG | - | chr3_4:688746-688765 | Msa0483860:three_prime_UTR | 35.0% | |
| ! | CTGATAATGAAGTTAGGGTT+TGG | + | chr3_4:688827-688846 | None:intergenic | 35.0% |
| ! | TTTGAAGCAAAAGCACAAAC+AGG | + | chr3_4:688897-688916 | None:intergenic | 35.0% |
| AACATGTGGAATTTGTAGGA+TGG | - | chr3_4:689189-689208 | Msa0483860:intron | 35.0% | |
| CAATAGAAAAGTGGACAAAC+AGG | + | chr3_4:689427-689446 | None:intergenic | 35.0% | |
| ATAGATGCTGTAAAAAGCAG+GGG | - | chr3_4:689881-689900 | Msa0483860:intron | 35.0% | |
| CCACAAGATTGTGTACTTAT+TGG | + | chr3_4:690036-690055 | None:intergenic | 35.0% | |
| CCAATAAGTACACAATCTTG+TGG | - | chr3_4:690033-690052 | Msa0483860:intron | 35.0% | |
| !! | CTTCTCTAAGATGACTATGT+TGG | - | chr3_4:690131-690150 | Msa0483860:intron | 35.0% |
| GAGTCAAGAGGAACAAAATT+AGG | + | chr3_4:690194-690213 | None:intergenic | 35.0% | |
| TTTCTCACATAAGAGTCAAG+AGG | + | chr3_4:690206-690225 | None:intergenic | 35.0% | |
| ! | CTGATTGCATGATAGTGTAA+TGG | + | chr3_4:690295-690314 | None:intergenic | 35.0% |
| AGCTCAAAAGGCAATAAAAG+GGG | + | chr3_4:690411-690430 | None:intergenic | 35.0% | |
| GAGCTCAAAAGGCAATAAAA+GGG | + | chr3_4:690412-690431 | None:intergenic | 35.0% | |
| AGAGCTCAAAAGGCAATAAA+AGG | + | chr3_4:690413-690432 | None:intergenic | 35.0% | |
| TTACTGAATGTAGATAAGCC+TGG | - | chr3_4:690473-690492 | Msa0483860:intron | 35.0% | |
| TGTGTTATCACTGACATTCA+TGG | - | chr3_4:690564-690583 | Msa0483860:intron | 35.0% | |
| GTGTTATCACTGACATTCAT+GGG | - | chr3_4:690565-690584 | Msa0483860:intron | 35.0% | |
| ! | ATGTATTGATGCAATGTTCC+GGG | + | chr3_4:690743-690762 | None:intergenic | 35.0% |
| ! | GATGTATTGATGCAATGTTC+CGG | + | chr3_4:690744-690763 | None:intergenic | 35.0% |
| GGATGTATTGCTTATGAATG+AGG | - | chr3_4:691108-691127 | Msa0483860:five_prime_UTR | 35.0% | |
| TTTCAATCCCATGGAAACAA+TGG | + | chr3_4:691152-691171 | None:intergenic | 35.0% | |
| !! | CATGTTTGTTTTCTCCACAA+AGG | - | chr3_4:691192-691211 | Msa0483860:five_prime_UTR | 35.0% |
| ! | CTATTGGATTGGATTTCTGC+TGG | - | chr3_4:688945-688964 | Msa0483860:three_prime_UTR | 40.0% |
| CTTTATACAGGTTGTTTGGC+TGG | - | chr3_4:688996-689015 | Msa0483860:CDS | 40.0% | |
| ! | ATGTTGTTGCTTCATGGACT+TGG | - | chr3_4:689152-689171 | Msa0483860:intron | 40.0% |
| ! | TGTTGTTGCTTCATGGACTT+GGG | - | chr3_4:689153-689172 | Msa0483860:intron | 40.0% |
| ATTTGTAGGATGGCCTTTGA+TGG | - | chr3_4:689199-689218 | Msa0483860:intron | 40.0% | |
| TGTCCTGATTGTAAACTTCC+TGG | - | chr3_4:689226-689245 | Msa0483860:intron | 40.0% | |
| GTCCTGATTGTAAACTTCCT+GGG | - | chr3_4:689227-689246 | Msa0483860:intron | 40.0% | |
| TCCTGATTGTAAACTTCCTG+GGG | - | chr3_4:689228-689247 | Msa0483860:intron | 40.0% | |
| CTGAGCTGAAGAAAAGTAGT+AGG | - | chr3_4:689912-689931 | Msa0483860:intron | 40.0% | |
| CTGCATGTAAAGAGCTCAAA+AGG | + | chr3_4:690423-690442 | None:intergenic | 40.0% | |
| ! | CTTTTGAGCTCTTTACATGC+AGG | - | chr3_4:690421-690440 | Msa0483860:intron | 40.0% |
| AAAGGAGGAAGACATCAAAG+TGG | + | chr3_4:690719-690738 | None:intergenic | 40.0% | |
| ! | TGTATTGATGCAATGTTCCG+GGG | + | chr3_4:690742-690761 | None:intergenic | 40.0% |
| ! | AAACTGCACATAGTGGGAAA+AGG | + | chr3_4:690865-690884 | None:intergenic | 40.0% |
| ! | TTTTCCCACTATGTGCAGTT+TGG | - | chr3_4:690864-690883 | Msa0483860:intron | 40.0% |
| TTTCCCACTATGTGCAGTTT+GGG | - | chr3_4:690865-690884 | Msa0483860:intron | 40.0% | |
| ! | GATGGCATGTTGTTGCTTCA+TGG | - | chr3_4:689146-689165 | Msa0483860:intron | 45.0% |
| GATGCACAGGATGAAACATG+TGG | - | chr3_4:689175-689194 | Msa0483860:intron | 45.0% | |
| ATCAGGACAGCATCCATCAA+AGG | + | chr3_4:689215-689234 | None:intergenic | 45.0% | |
| TCCCCAGGAAGTTTACAATC+AGG | + | chr3_4:689232-689251 | None:intergenic | 45.0% | |
| TTGACTGAGACGTGGAACAA+AGG | + | chr3_4:689990-690009 | None:intergenic | 45.0% | |
| !! | ATATCGACTTGACTGAGACG+TGG | + | chr3_4:689998-690017 | None:intergenic | 45.0% |
| CGTCTCAGTCAAGTCGATAT+AGG | - | chr3_4:689998-690017 | Msa0483860:intron | 45.0% | |
| CTATCATGCAATCAGCCAAC+TGG | - | chr3_4:690300-690319 | Msa0483860:intron | 45.0% | |
| AGGGGAACTCATTGTGTACA+AGG | + | chr3_4:690393-690412 | None:intergenic | 45.0% | |
| TTCCCACTATGTGCAGTTTG+GGG | - | chr3_4:690866-690885 | Msa0483860:intron | 45.0% | |
| CGTCGGGAATGGCAATTTAA+AGG | - | chr3_4:690971-690990 | Msa0483860:intron | 45.0% | |
| TGCGGGACTAGACAAGACAA+AGG | - | chr3_4:688739-688758 | Msa0483860:three_prime_UTR | 50.0% | |
| TACAGGTTGTTTGGCTGGTG+TGG | - | chr3_4:689001-689020 | Msa0483860:CDS | 50.0% | |
| TTGTTTGGCTGGTGTGGTTC+TGG | - | chr3_4:689007-689026 | Msa0483860:CDS | 50.0% | |
| TTCATGGACTTGGGATGCAC+AGG | - | chr3_4:689162-689181 | Msa0483860:intron | 50.0% | |
| TGATGTCTTCCTCCTTTCCC+CGG | - | chr3_4:690722-690741 | Msa0483860:CDS | 50.0% | |
| TGATGCAATGTTCCGGGGAA+AGG | + | chr3_4:690737-690756 | None:intergenic | 50.0% | |
| CACCCCAAACTGCACATAGT+GGG | + | chr3_4:690871-690890 | None:intergenic | 50.0% | |
| CATTGGGCAATGTGCTTGTG+AGG | + | chr3_4:690948-690967 | None:intergenic | 50.0% | |
| CACATTGCCCAATGTGTCGT+CGG | - | chr3_4:690954-690973 | Msa0483860:intron | 50.0% | |
| ACATTGCCCAATGTGTCGTC+GGG | - | chr3_4:690955-690974 | Msa0483860:intron | 50.0% | |
| TGAGACGTGGAACAAAGGCC+TGG | + | chr3_4:689985-690004 | None:intergenic | 55.0% | |
| TGCAATGTTCCGGGGAAAGG+AGG | + | chr3_4:690734-690753 | None:intergenic | 55.0% | |
| GCACCCCAAACTGCACATAG+TGG | + | chr3_4:690872-690891 | None:intergenic | 55.0% | |
| GCCATTCCCGACGACACATT+GGG | + | chr3_4:690964-690983 | None:intergenic | 55.0% | |
| TGCCATTCCCGACGACACAT+TGG | + | chr3_4:690965-690984 | None:intergenic | 55.0% | |
| CTGAGTGGACAGTCATCCCC+AGG | + | chr3_4:689247-689266 | None:intergenic | 60.0% | |
| GCCCAATGTGTCGTCGGGAA+TGG | - | chr3_4:690960-690979 | Msa0483860:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 688721 | 691246 | 688721 | ID=Msa0483860;Name=Msa0483860 |
| chr3_4 | mRNA | 688721 | 691246 | 688721 | ID=Msa0483860-mRNA-1;Parent=Msa0483860;Name=Msa0483860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=317|1|1|1|0.5|0.66|3|249|57 |
| chr3_4 | exon | 688721 | 689085 | 688721 | ID=Msa0483860-mRNA-1:exon:237;Parent=Msa0483860-mRNA-1 |
| chr3_4 | exon | 690702 | 690820 | 690702 | ID=Msa0483860-mRNA-1:exon:236;Parent=Msa0483860-mRNA-1 |
| chr3_4 | exon | 690991 | 691246 | 690991 | ID=Msa0483860-mRNA-1:exon:235;Parent=Msa0483860-mRNA-1 |
| chr3_4 | five_prime_UTR | 690991 | 691246 | 690991 | ID=Msa0483860-mRNA-1:five_prime_utr;Parent=Msa0483860-mRNA-1 |
| chr3_4 | five_prime_UTR | 690760 | 690820 | 690760 | ID=Msa0483860-mRNA-1:five_prime_utr;Parent=Msa0483860-mRNA-1 |
| chr3_4 | CDS | 690702 | 690759 | 690702 | ID=Msa0483860-mRNA-1:cds;Parent=Msa0483860-mRNA-1 |
| chr3_4 | CDS | 688970 | 689085 | 688970 | ID=Msa0483860-mRNA-1:cds;Parent=Msa0483860-mRNA-1 |
| chr3_4 | three_prime_UTR | 688721 | 688969 | 688721 | ID=Msa0483860-mRNA-1:three_prime_utr;Parent=Msa0483860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
