Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425220 | PNX99706.1 | 95.812 | 191 | 8 | 0 | 32 | 222 | 1 | 191 | 1.64e-133 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425220 | sp|Q86KL4|MCTS1_DICDI | 55.102 | 147 | 66 | 0 | 11 | 157 | 12 | 158 | 2.81e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425220 | A0A2K3N9K0 | 95.812 | 191 | 8 | 0 | 32 | 222 | 1 | 191 | 7.86e-134 | 383 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0425220 | 0.822421 | 2.390030e-53 | -8.615850e-47 |
| Msa0004860 | Msa0425220 | 0.803004 | 4.287816e-49 | -8.615850e-47 |
| Msa0008410 | Msa0425220 | 0.818932 | 1.514439e-52 | -8.615850e-47 |
| Msa0015300 | Msa0425220 | 0.812209 | 4.757506e-51 | -8.615850e-47 |
| Msa0025730 | Msa0425220 | 0.813395 | 2.616412e-51 | -8.615850e-47 |
| Msa0027260 | Msa0425220 | 0.810726 | 9.986260e-51 | -8.615850e-47 |
| Msa0032260 | Msa0425220 | 0.840598 | 7.897067e-58 | -8.615850e-47 |
| Msa0047160 | Msa0425220 | 0.802021 | 6.835821e-49 | -8.615850e-47 |
| Msa0047980 | Msa0425220 | 0.802506 | 5.432423e-49 | -8.615850e-47 |
| Msa0056470 | Msa0425220 | 0.812322 | 4.494145e-51 | -8.615850e-47 |
| Msa0057140 | Msa0425220 | 0.849354 | 3.413003e-60 | -8.615850e-47 |
| Msa0064350 | Msa0425220 | 0.819563 | 1.087803e-52 | -8.615850e-47 |
| Msa0064380 | Msa0425220 | 0.809353 | 1.972850e-50 | -8.615850e-47 |
| Msa0073480 | Msa0425220 | 0.831495 | 1.616616e-55 | -8.615850e-47 |
| Msa0074320 | Msa0425220 | 0.803595 | 3.233615e-49 | -8.615850e-47 |
| Msa0076000 | Msa0425220 | 0.830312 | 3.153009e-55 | -8.615850e-47 |
| Msa0082280 | Msa0425220 | 0.854797 | 9.687135e-62 | -8.615850e-47 |
| Msa0084940 | Msa0425220 | 0.821793 | 3.342677e-53 | -8.615850e-47 |
| Msa0094470 | Msa0425220 | 0.829390 | 5.289044e-55 | -8.615850e-47 |
| Msa0094950 | Msa0425220 | 0.800939 | 1.139167e-48 | -8.615850e-47 |
| Msa0127310 | Msa0425220 | 0.825929 | 3.585412e-54 | -8.615850e-47 |
| Msa0128860 | Msa0425220 | 0.804269 | 2.342239e-49 | -8.615850e-47 |
| Msa0129060 | Msa0425220 | 0.821783 | 3.360225e-53 | -8.615850e-47 |
| Msa0140650 | Msa0425220 | 0.814393 | 1.576201e-51 | -8.615850e-47 |
| Msa0155430 | Msa0425220 | 0.806885 | 6.619214e-50 | -8.615850e-47 |
| Msa0165950 | Msa0425220 | 0.817399 | 3.365783e-52 | -8.615850e-47 |
| Msa0167480 | Msa0425220 | 0.810205 | 1.294181e-50 | -8.615850e-47 |
| Msa0168720 | Msa0425220 | 0.800585 | 1.344885e-48 | -8.615850e-47 |
| Msa0174730 | Msa0425220 | 0.803716 | 3.052349e-49 | -8.615850e-47 |
| Msa0174770 | Msa0425220 | 0.853569 | 2.190958e-61 | -8.615850e-47 |
| Msa0174860 | Msa0425220 | 0.807078 | 6.025435e-50 | -8.615850e-47 |
| Msa0186890 | Msa0425220 | 0.810945 | 8.954577e-51 | -8.615850e-47 |
| Msa0187930 | Msa0425220 | 0.807053 | 6.099155e-50 | -8.615850e-47 |
| Msa0191050 | Msa0425220 | 0.846258 | 2.431610e-59 | -8.615850e-47 |
| Msa0194540 | Msa0425220 | 0.808992 | 2.358595e-50 | -8.615850e-47 |
| Msa0199690 | Msa0425220 | 0.849052 | 4.139921e-60 | -8.615850e-47 |
| Msa0199880 | Msa0425220 | 0.834562 | 2.789683e-56 | -8.615850e-47 |
| Msa0211840 | Msa0425220 | 0.816638 | 4.987553e-52 | -8.615850e-47 |
| Msa0211860 | Msa0425220 | 0.805531 | 1.276220e-49 | -8.615850e-47 |
| Msa0226470 | Msa0425220 | 0.815051 | 1.126693e-51 | -8.615850e-47 |
| Msa0227400 | Msa0425220 | 0.801302 | 9.600177e-49 | -8.615850e-47 |
| Msa0229760 | Msa0425220 | 0.811738 | 6.025864e-51 | -8.615850e-47 |
| Msa0231880 | Msa0425220 | 0.800168 | 1.635433e-48 | -8.615850e-47 |
| Msa0233350 | Msa0425220 | 0.844026 | 9.751387e-59 | -8.615850e-47 |
| Msa0236270 | Msa0425220 | 0.807097 | 5.970948e-50 | -8.615850e-47 |
| Msa0366890 | Msa0425220 | 0.851198 | 1.037695e-60 | -8.615850e-47 |
| Msa0369050 | Msa0425220 | 0.824259 | 8.892189e-54 | -8.615850e-47 |
| Msa0369220 | Msa0425220 | 0.820069 | 8.333703e-53 | -8.615850e-47 |
| Msa0369450 | Msa0425220 | 0.806529 | 7.869531e-50 | -8.615850e-47 |
| Msa0376300 | Msa0425220 | 0.828846 | 7.163533e-55 | -8.615850e-47 |
| Msa0376310 | Msa0425220 | 0.815901 | 7.288559e-52 | -8.615850e-47 |
| Msa0376690 | Msa0425220 | 0.920385 | 1.368934e-87 | -8.615850e-47 |
| Msa0378490 | Msa0425220 | 0.812374 | 4.378629e-51 | -8.615850e-47 |
| Msa0385580 | Msa0425220 | 0.810518 | 1.107764e-50 | -8.615850e-47 |
| Msa0387730 | Msa0425220 | 0.836002 | 1.207459e-56 | -8.615850e-47 |
| Msa0394400 | Msa0425220 | 0.816216 | 6.201258e-52 | -8.615850e-47 |
| Msa0402330 | Msa0425220 | 0.843837 | 1.095695e-58 | -8.615850e-47 |
| Msa0414800 | Msa0425220 | 0.843285 | 1.539791e-58 | -8.615850e-47 |
| Msa0425220 | Msa0441130 | 0.801915 | 7.186990e-49 | -8.615850e-47 |
| Msa0425220 | Msa0458060 | 0.840394 | 8.928315e-58 | -8.615850e-47 |
| Msa0425220 | Msa0471440 | 0.826426 | 2.730421e-54 | -8.615850e-47 |
| Msa0425220 | Msa0471590 | 0.864156 | 1.488818e-64 | -8.615850e-47 |
| Msa0425220 | Msa0477080 | 0.810411 | 1.167979e-50 | -8.615850e-47 |
| Msa0425220 | Msa0481480 | 0.827797 | 1.282837e-54 | -8.615850e-47 |
| Msa0425220 | Msa0481810 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
| Msa0425220 | Msa0508590 | 0.825361 | 4.887914e-54 | -8.615850e-47 |
| Msa0425220 | Msa0508630 | 0.836685 | 8.095951e-57 | -8.615850e-47 |
| Msa0425220 | Msa0521050 | 0.803286 | 3.748689e-49 | -8.615850e-47 |
| Msa0425220 | Msa0541860 | 0.809984 | 1.444256e-50 | -8.615850e-47 |
| Msa0425220 | Msa0552810 | 0.834562 | 2.790150e-56 | -8.615850e-47 |
| Msa0425220 | Msa0555450 | 0.800337 | 1.511085e-48 | -8.615850e-47 |
| Msa0425220 | Msa0558810 | 0.803369 | 3.603242e-49 | -8.615850e-47 |
| Msa0425220 | Msa0568820 | 0.815039 | 1.133723e-51 | -8.615850e-47 |
| Msa0425220 | Msa0581070 | 0.831975 | 1.230681e-55 | -8.615850e-47 |
| Msa0425220 | Msa0585960 | 0.817867 | 2.639278e-52 | -8.615850e-47 |
| Msa0425220 | Msa0589190 | 0.817850 | 2.662740e-52 | -8.615850e-47 |
| Msa0425220 | Msa0619070 | 0.825615 | 4.255980e-54 | -8.615850e-47 |
| Msa0425220 | Msa0621950 | 0.810102 | 1.362242e-50 | -8.615850e-47 |
| Msa0425220 | Msa0622960 | 0.801254 | 9.821380e-49 | -8.615850e-47 |
| Msa0425220 | Msa0623700 | 0.832500 | 9.125440e-56 | -8.615850e-47 |
| Msa0425220 | Msa0644860 | 0.815585 | 8.572443e-52 | -8.615850e-47 |
| Msa0425220 | Msa0647500 | 0.820756 | 5.798475e-53 | -8.615850e-47 |
| Msa0425220 | Msa0661300 | 0.813458 | 2.534202e-51 | -8.615850e-47 |
| Msa0425220 | Msa0663900 | 0.810922 | 9.059103e-51 | -8.615850e-47 |
| Msa0425220 | Msa0682780 | 0.811619 | 6.395145e-51 | -8.615850e-47 |
| Msa0425220 | Msa0687630 | 0.857218 | 1.895991e-62 | -8.615850e-47 |
| Msa0425220 | Msa0690150 | 0.800502 | 1.398604e-48 | -8.615850e-47 |
| Msa0425220 | Msa0690160 | 0.800469 | 1.420217e-48 | -8.615850e-47 |
| Msa0425220 | Msa0691900 | 0.843155 | 1.667438e-58 | -8.615850e-47 |
| Msa0425220 | Msa0692840 | 0.842320 | 2.779323e-58 | -8.615850e-47 |
| Msa0425220 | Msa0692940 | 0.848374 | 6.384230e-60 | -8.615850e-47 |
| Msa0425220 | Msa0697670 | 0.800275 | 1.555433e-48 | -8.615850e-47 |
| Msa0425220 | Msa0703230 | 0.806862 | 6.692787e-50 | -8.615850e-47 |
| Msa0425220 | Msa0706960 | 0.823988 | 1.029410e-53 | -8.615850e-47 |
| Msa0425220 | Msa0709500 | 0.825963 | 3.518523e-54 | -8.615850e-47 |
| Msa0425220 | Msa0713820 | 0.805816 | 1.112183e-49 | -8.615850e-47 |
| Msa0425220 | Msa0763070 | 0.811007 | 8.680713e-51 | -8.615850e-47 |
| Msa0425220 | Msa0790850 | 0.834545 | 2.816958e-56 | -8.615850e-47 |
| Msa0425220 | Msa0797120 | 0.803629 | 3.182689e-49 | -8.615850e-47 |
| Msa0425220 | Msa0808270 | 0.801544 | 8.565977e-49 | -8.615850e-47 |
| Msa0425220 | Msa0819030 | -0.808142 | 3.581588e-50 | -8.615850e-47 |
| Msa0425220 | Msa0831870 | 0.810356 | 1.200592e-50 | -8.615850e-47 |
| Msa0425220 | Msa0842830 | 0.812136 | 4.934267e-51 | -8.615850e-47 |
| Msa0425220 | Msa0847080 | 0.835941 | 1.251707e-56 | -8.615850e-47 |
| Msa0425220 | Msa0869120 | 0.803533 | 3.332203e-49 | -8.615850e-47 |
| Msa0425220 | Msa0876200 | 0.801820 | 7.517271e-49 | -8.615850e-47 |
| Msa0425220 | Msa0902760 | 0.819480 | 1.136316e-52 | -8.615850e-47 |
| Msa0425220 | Msa0926460 | 0.808396 | 3.161996e-50 | -8.615850e-47 |
| Msa0425220 | Msa0933290 | 0.811441 | 6.992068e-51 | -8.615850e-47 |
| Msa0425220 | Msa0965860 | 0.803526 | 3.342743e-49 | -8.615850e-47 |
| Msa0425220 | Msa0967370 | 0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa0425220 | Msa0968590 | 0.814359 | 1.604195e-51 | -8.615850e-47 |
| Msa0425220 | Msa0970030 | 0.825693 | 4.078355e-54 | -8.615850e-47 |
| Msa0425220 | Msa1013400 | 0.822092 | 2.850310e-53 | -8.615850e-47 |
| Msa0425220 | Msa1019240 | 0.818427 | 1.971820e-52 | -8.615850e-47 |
| Msa0425220 | Msa1019260 | 0.823337 | 1.462280e-53 | -8.615850e-47 |
| Msa0425220 | Msa1040890 | 0.804506 | 2.090954e-49 | -8.615850e-47 |
| Msa0425220 | Msa1046020 | 0.827993 | 1.150570e-54 | -8.615850e-47 |
| Msa0425220 | Msa1046060 | 0.814452 | 1.529858e-51 | -8.615850e-47 |
| Msa0425220 | Msa1050210 | 0.824900 | 6.282411e-54 | -8.615850e-47 |
| Msa0425220 | Msa1055410 | 0.804265 | 2.347311e-49 | -8.615850e-47 |
| Msa0425220 | Msa1081150 | 0.831476 | 1.634024e-55 | -8.615850e-47 |
| Msa0425220 | Msa1082700 | 0.801617 | 8.275905e-49 | -8.615850e-47 |
| Msa0425220 | Msa1084470 | 0.811510 | 6.753509e-51 | -8.615850e-47 |
| Msa0425220 | Msa1089840 | 0.842962 | 1.876592e-58 | -8.615850e-47 |
| Msa0425220 | Msa1091100 | 0.806036 | 9.996247e-50 | -8.615850e-47 |
| Msa0425220 | Msa1091530 | 0.821009 | 5.071200e-53 | -8.615850e-47 |
| Msa0425220 | Msa1093530 | 0.817318 | 3.508608e-52 | -8.615850e-47 |
| Msa0425220 | Msa1101600 | 0.832941 | 7.092985e-56 | -8.615850e-47 |
| Msa0425220 | Msa1104140 | 0.832124 | 1.130239e-55 | -8.615850e-47 |
| Msa0425220 | Msa1104210 | 0.818411 | 1.987429e-52 | -8.615850e-47 |
| Msa0425220 | Msa1119200 | 0.816022 | 6.849452e-52 | -8.615850e-47 |
| Msa0425220 | Msa1125760 | 0.804883 | 1.743904e-49 | -8.615850e-47 |
| Msa0425220 | Msa1126510 | 0.851837 | 6.841402e-61 | -8.615850e-47 |
| Msa0425220 | Msa1126770 | 0.860262 | 2.334498e-63 | -8.615850e-47 |
| Msa0425220 | Msa1127890 | 0.834618 | 2.700810e-56 | -8.615850e-47 |
| Msa0425220 | Msa1134090 | 0.813498 | 2.482551e-51 | -8.615850e-47 |
| Msa0425220 | Msa1143840 | 0.816284 | 5.987730e-52 | -8.615850e-47 |
| Msa0425220 | Msa1165870 | 0.834358 | 3.139614e-56 | -8.615850e-47 |
| Msa0425220 | Msa1165940 | 0.828218 | 1.016054e-54 | -8.615850e-47 |
| Msa0425220 | Msa1166330 | 0.833589 | 4.889179e-56 | -8.615850e-47 |
| Msa0425220 | Msa1166340 | 0.834939 | 2.241948e-56 | -8.615850e-47 |
| Msa0425220 | Msa1166860 | 0.855760 | 5.080845e-62 | -8.615850e-47 |
| Msa0425220 | Msa1166870 | 0.800762 | 1.237558e-48 | -8.615850e-47 |
| Msa0425220 | Msa1171360 | 0.825920 | 3.601902e-54 | -8.615850e-47 |
| Msa0425220 | Msa1179950 | 0.824847 | 6.465738e-54 | -8.615850e-47 |
| Msa0425220 | Msa1179980 | 0.812217 | 4.737461e-51 | -8.615850e-47 |
| Msa0425220 | Msa1184370 | 0.804163 | 2.464823e-49 | -8.615850e-47 |
| Msa0425220 | Msa1187840 | 0.834626 | 2.687868e-56 | -8.615850e-47 |
| Msa0425220 | Msa1204250 | 0.800102 | 1.686662e-48 | -8.615850e-47 |
| Msa0425220 | Msa1207270 | 0.832309 | 1.017408e-55 | -8.615850e-47 |
| Msa0425220 | Msa1211890 | 0.810346 | 1.206617e-50 | -8.615850e-47 |
| Msa0425220 | Msa1218600 | 0.835094 | 2.049170e-56 | -8.615850e-47 |
| Msa0425220 | Msa1227690 | 0.827190 | 1.793947e-54 | -8.615850e-47 |
| Msa0425220 | Msa1237940 | 0.827778 | 1.296553e-54 | -8.615850e-47 |
| Msa0425220 | Msa1255040 | -0.818514 | 1.884390e-52 | -8.615850e-47 |
| Msa0425220 | Msa1257510 | 0.820581 | 6.358684e-53 | -8.615850e-47 |
| Msa0425220 | Msa1265630 | 0.802344 | 5.864730e-49 | -8.615850e-47 |
| Msa0425220 | Msa1269300 | 0.843385 | 1.447357e-58 | -8.615850e-47 |
| Msa0425220 | Msa1270690 | 0.804289 | 2.319997e-49 | -8.615850e-47 |
| Msa0425220 | Msa1275360 | 0.805668 | 1.194320e-49 | -8.615850e-47 |
| Msa0425220 | Msa1281190 | 0.808400 | 3.155311e-50 | -8.615850e-47 |
| Msa0425220 | Msa1283170 | 0.840835 | 6.843535e-58 | -8.615850e-47 |
| Msa0425220 | Msa1304820 | 0.845111 | 4.979443e-59 | -8.615850e-47 |
| Msa0425220 | Msa1306990 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
| Msa0425220 | Msa1307950 | 0.835951 | 1.244435e-56 | -8.615850e-47 |
| Msa0425220 | Msa1316780 | 0.825739 | 3.976838e-54 | -8.615850e-47 |
| Msa0425220 | Msa1316830 | 0.843613 | 1.258138e-58 | -8.615850e-47 |
| Msa0425220 | Msa1321630 | 0.800282 | 1.550209e-48 | -8.615850e-47 |
| Msa0425220 | Msa1345450 | 0.817835 | 2.682848e-52 | -8.615850e-47 |
| Msa0425220 | Msa1355970 | 0.806748 | 7.075024e-50 | -8.615850e-47 |
| Msa0425220 | Msa1356440 | 0.827359 | 1.634294e-54 | -8.615850e-47 |
| Msa0425220 | Msa1359390 | 0.801057 | 1.077247e-48 | -8.615850e-47 |
| Msa0425220 | Msa1361100 | 0.820645 | 6.148118e-53 | -8.615850e-47 |
| Msa0425220 | Msa1364910 | 0.810477 | 1.130563e-50 | -8.615850e-47 |
| Msa0425220 | Msa1365150 | 0.800157 | 1.644133e-48 | -8.615850e-47 |
| Msa0425220 | Msa1367880 | 0.803475 | 3.425751e-49 | -8.615850e-47 |
| Msa0425220 | Msa1370860 | 0.853424 | 2.411159e-61 | -8.615850e-47 |
| Msa0425220 | Msa1379760 | 0.809821 | 1.565743e-50 | -8.615850e-47 |
| Msa0425220 | Msa1386780 | 0.808581 | 2.886253e-50 | -8.615850e-47 |
| Msa0425220 | Msa1387420 | 0.822253 | 2.615285e-53 | -8.615850e-47 |
| Msa0425220 | Msa1392200 | 0.809215 | 2.112521e-50 | -8.615850e-47 |
| Msa0425220 | Msa1394290 | 0.806294 | 8.822061e-50 | -8.615850e-47 |
| Msa0425220 | Msa1397810 | 0.833218 | 6.051793e-56 | -8.615850e-47 |
| Msa0425220 | Msa1404010 | 0.817008 | 4.119369e-52 | -8.615850e-47 |
| Msa0425220 | Msa1404190 | 0.825807 | 3.832325e-54 | -8.615850e-47 |
| Msa0425220 | Msa1407460 | 0.828045 | 1.118423e-54 | -8.615850e-47 |
| Msa0425220 | Msa1433310 | 0.806455 | 8.156335e-50 | -8.615850e-47 |
| Msa0425220 | Msa1440000 | 0.801111 | 1.050260e-48 | -8.615850e-47 |
| Msa0425220 | Msa1442850 | 0.816320 | 5.875336e-52 | -8.615850e-47 |
| Msa0425220 | Msa1444310 | 0.808410 | 3.139838e-50 | -8.615850e-47 |
| Msa0425220 | Msa1448690 | 0.807763 | 4.311652e-50 | -8.615850e-47 |
| Msa0425220 | Msa1450280 | 0.826228 | 3.044211e-54 | -8.615850e-47 |
| Msa0425220 | Msa1457920 | 0.806500 | 7.982511e-50 | -8.615850e-47 |
| Msa0425220 | Msa1461280 | 0.848730 | 5.086907e-60 | -8.615850e-47 |
| Msa0425220 | Msa1465080 | 0.814511 | 1.484423e-51 | -8.615850e-47 |
| Msa0425220 | Msa1466300 | 0.813443 | 2.552548e-51 | -8.615850e-47 |
| Msa0242230 | Msa0425220 | 0.817993 | 2.471750e-52 | -8.615850e-47 |
| Msa0242410 | Msa0425220 | 0.807874 | 4.084992e-50 | -8.615850e-47 |
| Msa0244780 | Msa0425220 | 0.806370 | 8.501243e-50 | -8.615850e-47 |
| Msa0260240 | Msa0425220 | 0.807962 | 3.912149e-50 | -8.615850e-47 |
| Msa0260280 | Msa0425220 | 0.805672 | 1.192151e-49 | -8.615850e-47 |
| Msa0262310 | Msa0425220 | 0.817369 | 3.417421e-52 | -8.615850e-47 |
| Msa0264570 | Msa0425220 | 0.805293 | 1.431627e-49 | -8.615850e-47 |
| Msa0267970 | Msa0425220 | 0.945801 | 1.545523e-104 | -8.615850e-47 |
| Msa0268130 | Msa0425220 | 0.812597 | 3.914007e-51 | -8.615850e-47 |
| Msa0280430 | Msa0425220 | 0.827691 | 1.360170e-54 | -8.615850e-47 |
| Msa0280610 | Msa0425220 | 0.850141 | 2.056633e-60 | -8.615850e-47 |
| Msa0291520 | Msa0425220 | 0.817605 | 3.023189e-52 | -8.615850e-47 |
| Msa0298990 | Msa0425220 | 0.809174 | 2.155788e-50 | -8.615850e-47 |
| Msa0304590 | Msa0425220 | 0.833873 | 4.153537e-56 | -8.615850e-47 |
| Msa0304660 | Msa0425220 | 0.822762 | 1.991867e-53 | -8.615850e-47 |
| Msa0310030 | Msa0425220 | 0.801481 | 8.824714e-49 | -8.615850e-47 |
| Msa0314720 | Msa0425220 | 0.811127 | 8.178654e-51 | -8.615850e-47 |
| Msa0322890 | Msa0425220 | 0.833258 | 5.913507e-56 | -8.615850e-47 |
| Msa0331700 | Msa0425220 | 0.822917 | 1.833077e-53 | -8.615850e-47 |
| Msa0337650 | Msa0425220 | 0.822630 | 2.137766e-53 | -8.615850e-47 |
| Msa0342360 | Msa0425220 | 0.803474 | 3.426048e-49 | -8.615850e-47 |
| Msa0355270 | Msa0425220 | 0.846025 | 2.813933e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425220 | MtrunA17_Chr3g0127251 | 96.795 | 156 | 5 | 0 | 4 | 159 | 4 | 159 | 2.73e-110 | 314 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0425220 | AT1G09150.1 | 82.051 | 156 | 28 | 0 | 4 | 159 | 4 | 159 | 1.77e-92 | 269 |
Find 58 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTAATTTCTTCATTATATC+TGG | 0.192913 | 3_2:+75613474 | None:intergenic |
| CACCTCTTATAGTTGCTAAA+TGG | 0.288298 | 3_2:-75614774 | Msa0425220:intron |
| AAAGCAATCAACAAGGGAAT+TGG | 0.322873 | 3_2:-75612739 | Msa0425220:CDS |
| ATTATCTCAATGATGGTCTT+TGG | 0.327245 | 3_2:-75612702 | Msa0425220:CDS |
| TGTCCTGGTCTTACATCTCC+TGG | 0.329472 | 3_2:-75613402 | Msa0425220:CDS |
| AAATATGAACTTTACATTGA+TGG | 0.334633 | 3_2:+75614559 | None:intergenic |
| GGGTGTTCTGGATGAGGAAG+TGG | 0.336037 | 3_2:-75613379 | Msa0425220:CDS |
| AACTATAAGAGGTGACTTCT+TGG | 0.338003 | 3_2:+75614783 | None:intergenic |
| TGGTGCAATAAGATTTGTTT+TGG | 0.351364 | 3_2:-75613442 | Msa0425220:CDS |
| AAAATTTCTAGTATTGTGTT+AGG | 0.353397 | 3_2:-75612036 | Msa0425220:three_prime_UTR |
| AAGCAATCAACAAGGGAATT+GGG | 0.354037 | 3_2:-75612738 | Msa0425220:CDS |
| CGCTTATGATCCCTAAAATC+TGG | 0.363912 | 3_2:+75612361 | None:intergenic |
| GTGTTCTGGATGAGGAAGTG+GGG | 0.404683 | 3_2:-75613377 | Msa0425220:CDS |
| TGGATCAAGTTCCAGAAAAC+AGG | 0.408316 | 3_2:+75612381 | None:intergenic |
| GAGAGCCGCGATGCCAACTT+AGG | 0.431618 | 3_2:-75612412 | Msa0425220:CDS |
| AACCATTTAGCAACTATAAG+AGG | 0.435947 | 3_2:+75614772 | None:intergenic |
| GGTGTTCTGGATGAGGAAGT+GGG | 0.436303 | 3_2:-75613378 | Msa0425220:CDS |
| GTCCTGGTCTTACATCTCCT+GGG | 0.439119 | 3_2:-75613401 | Msa0425220:CDS |
| TCCAACACTGGTTCAAGTCC+TGG | 0.460743 | 3_2:+75614817 | None:intergenic |
| CAAACAAAATAAAGATCAAA+TGG | 0.460987 | 3_2:+75612134 | None:intergenic |
| AAGAAGTTCAACTACTTTCG+TGG | 0.462951 | 3_2:-75612769 | Msa0425220:CDS |
| ACTATAAGAGGTGACTTCTT+GGG | 0.475825 | 3_2:+75614784 | None:intergenic |
| GCGTGGTTCAGCCACTCAAT+AGG | 0.477544 | 3_2:+75612184 | None:intergenic |
| CACACAAGTTTATTCAAAGA+TGG | 0.478881 | 3_2:-75612162 | Msa0425220:three_prime_UTR |
| AAACAGCATGCCCTTGCCAT+TGG | 0.482054 | 3_2:-75613216 | Msa0425220:CDS |
| TTTCTCATTTCAGGCCATCA+TGG | 0.485619 | 3_2:-75613247 | Msa0425220:intron |
| TAGTCAGAACCATCTCAATC+TGG | 0.488658 | 3_2:-75614652 | Msa0425220:CDS |
| TGTTCTGGATGAGGAAGTGG+GGG | 0.494533 | 3_2:-75613376 | Msa0425220:CDS |
| AGTCGCAAGGTAGGCATGTA+CGG | 0.512614 | 3_2:+75614585 | None:intergenic |
| AGAGCCGCGATGCCAACTTA+GGG | 0.516621 | 3_2:-75612411 | Msa0425220:CDS |
| AACTTGCATTATCTCAATGA+TGG | 0.525811 | 3_2:-75612709 | Msa0425220:CDS |
| ATTACTAAACTGCAGTATCC+AGG | 0.527390 | 3_2:-75614835 | Msa0425220:intron |
| CAAAATAAAGATCAAATGGC+AGG | 0.532151 | 3_2:+75612138 | None:intergenic |
| ACAGGACTGCATCCCTAAGT+TGG | 0.534258 | 3_2:+75612399 | None:intergenic |
| CTCATGTAAACAGTAAAGAA+AGG | 0.535169 | 3_2:-75612314 | Msa0425220:three_prime_UTR |
| GAACCATCTCAATCTGGTTG+TGG | 0.552638 | 3_2:-75614646 | Msa0425220:CDS |
| ATGTAACTTGTGGAATACAC+TGG | 0.559241 | 3_2:-75612245 | Msa0425220:three_prime_UTR |
| GGTGCAAACATAATGTGTCC+TGG | 0.560571 | 3_2:-75613417 | Msa0425220:CDS |
| GTATAATAAAACAAACTAGC+AGG | 0.560702 | 3_2:+75612336 | None:intergenic |
| TCCTGGTCTTACATCTCCTG+GGG | 0.566559 | 3_2:-75613400 | Msa0425220:CDS |
| TCCAGGACTTGAACCAGTGT+TGG | 0.569000 | 3_2:-75614818 | Msa0425220:CDS |
| TCTCAATGATGGTCTTTGGA+AGG | 0.575361 | 3_2:-75612698 | Msa0425220:intron |
| AGCAATCAACAAGGGAATTG+GGG | 0.580148 | 3_2:-75612737 | Msa0425220:CDS |
| ACGTCAAAGTATTGCAGATG+AGG | 0.585598 | 3_2:-75615102 | Msa0425220:intron |
| AGTTCTGTACTCCTATTGAG+TGG | 0.595563 | 3_2:-75612195 | Msa0425220:three_prime_UTR |
| TGATGGAGAAGTCGCAAGGT+AGG | 0.596779 | 3_2:+75614576 | None:intergenic |
| TTTCAGGCCATCATGGCTGA+AGG | 0.607923 | 3_2:-75613240 | Msa0425220:intron |
| TCACCACAACCAGATTGAGA+TGG | 0.615908 | 3_2:+75614643 | None:intergenic |
| ACATTGATGGAGAAGTCGCA+AGG | 0.629589 | 3_2:+75614572 | None:intergenic |
| TTTGAATAAACTTGTGTGCG+TGG | 0.643292 | 3_2:+75612167 | None:intergenic |
| TTCAGAAAAGCAATCAACAA+GGG | 0.652972 | 3_2:-75612745 | Msa0425220:CDS |
| GGAAGTATATCATCCAACAC+TGG | 0.658326 | 3_2:+75614805 | None:intergenic |
| TGTAACTTGTGGAATACACT+GGG | 0.662827 | 3_2:-75612244 | Msa0425220:three_prime_UTR |
| TTTCAGAAAAGCAATCAACA+AGG | 0.684568 | 3_2:-75612746 | Msa0425220:CDS |
| CCTGGTCTTACATCTCCTGG+GGG | 0.695202 | 3_2:-75613399 | Msa0425220:CDS |
| AAACAAATCTTATTGCACCA+CGG | 0.718835 | 3_2:+75613445 | None:intergenic |
| GCATCCCTAAGTTGGCATCG+CGG | 0.749002 | 3_2:+75612407 | None:intergenic |
| AAGAAATTACAAGTTGACCG+TGG | 0.749697 | 3_2:-75613462 | Msa0425220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACAAAAAAAAAAAAAAA+AGG | + | chr3_2:75612132-75612151 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGTGT+TGG | - | chr3_2:75612131-75612150 | Msa0425220:three_prime_UTR | 10.0% |
| !! | AAATGATAATTGATAAATTA+CGG | + | chr3_2:75613573-75613592 | None:intergenic | 10.0% |
| !! | TATAATATATTAAAAATCAG+CGG | + | chr3_2:75614701-75614720 | None:intergenic | 10.0% |
| !!! | TACTAGAAATTTTAAATAAA+TGG | + | chr3_2:75615157-75615176 | None:intergenic | 10.0% |
| !! | CATATATTATCTTGATTAAA+AGG | + | chr3_2:75613327-75613346 | None:intergenic | 15.0% |
| !! | CATATATTATCTTGATTAAA+AGG | + | chr3_2:75613327-75613346 | None:intergenic | 15.0% |
| !! | AGAATAAAATAAAGATTGTT+AGG | + | chr3_2:75614725-75614744 | None:intergenic | 15.0% |
| !!! | ATTTTATTCTATATTGTAGA+TGG | - | chr3_2:75614735-75614754 | Msa0425220:intron | 15.0% |
| !! | AATAAAAAAGATGCATAGTT+TGG | + | chr3_2:75612302-75612321 | None:intergenic | 20.0% |
| !! | AAATATGAACTTTACATTGA+TGG | + | chr3_2:75612644-75612663 | None:intergenic | 20.0% |
| !! | TTTGTAATATTCTTTCATCT+GGG | - | chr3_2:75612682-75612701 | Msa0425220:intron | 20.0% |
| !!! | TTTTTTGAGTAATGCATATA+TGG | - | chr3_2:75612741-75612760 | Msa0425220:CDS | 20.0% |
| !! | TATGGATATAAACTACTTAT+AGG | - | chr3_2:75612759-75612778 | Msa0425220:CDS | 20.0% |
| !! | ATGCATATATAAAGTAAAAG+AGG | + | chr3_2:75613032-75613051 | None:intergenic | 20.0% |
| !! | TGTAATTTCTTCATTATATC+TGG | + | chr3_2:75613729-75613748 | None:intergenic | 20.0% |
| !! | CCATTAAAATTTATACTACA+TGG | + | chr3_2:75614313-75614332 | None:intergenic | 20.0% |
| !!! | CCATGTAGTATAAATTTTAA+TGG | - | chr3_2:75614310-75614329 | Msa0425220:intron | 20.0% |
| !! | TAATAAGTACATGAATACAA+AGG | + | chr3_2:75614548-75614567 | None:intergenic | 20.0% |
| !! | AAATAAGTATACATACATAG+TGG | - | chr3_2:75614567-75614586 | Msa0425220:intron | 20.0% |
| !!! | TCTTATCTCTTTTGTTTATT+TGG | - | chr3_2:75614637-75614656 | Msa0425220:CDS | 20.0% |
| !!! | CTTTTGTTTATTTGGAATTT+TGG | - | chr3_2:75614645-75614664 | Msa0425220:CDS | 20.0% |
| !! | CAAACAAAATAAAGATCAAA+TGG | + | chr3_2:75615069-75615088 | None:intergenic | 20.0% |
| !!! | CATTTGATCTTTATTTTGTT+TGG | - | chr3_2:75615067-75615086 | Msa0425220:intron | 20.0% |
| !!! | AAAATTTCTAGTATTGTGTT+AGG | - | chr3_2:75615164-75615183 | Msa0425220:CDS | 20.0% |
| ! | CATACAATTAGTGATATCTA+AGG | + | chr3_2:75612167-75612186 | None:intergenic | 25.0% |
| ! | TAGATATCACTAATTGTATG+TGG | - | chr3_2:75612167-75612186 | Msa0425220:three_prime_UTR | 25.0% |
| ! | AGATATCACTAATTGTATGT+GGG | - | chr3_2:75612168-75612187 | Msa0425220:three_prime_UTR | 25.0% |
| !! | TCGTGATTCTGATAATTTTA+TGG | - | chr3_2:75612252-75612271 | Msa0425220:three_prime_UTR | 25.0% |
| ! | TAGGTTAATTAATAGTCACA+TGG | + | chr3_2:75612344-75612363 | None:intergenic | 25.0% |
| ! | ATACTGCAGTTTAGTAATTT+AGG | + | chr3_2:75612363-75612382 | None:intergenic | 25.0% |
| ! | GTTTGTAATATTCTTTCATC+TGG | - | chr3_2:75612681-75612700 | Msa0425220:intron | 25.0% |
| !! | GAATACATGATAATGTTGAT+TGG | - | chr3_2:75612899-75612918 | Msa0425220:intron | 25.0% |
| ! | TATGTGTTGAAGATATTATC+TGG | + | chr3_2:75613081-75613100 | None:intergenic | 25.0% |
| ! | ATTAAAACTAGCAAAACTCT+TGG | + | chr3_2:75613174-75613193 | None:intergenic | 25.0% |
| ! | TATCTTGATTAAAAGGTTTG+AGG | + | chr3_2:75613320-75613339 | None:intergenic | 25.0% |
| ! | TATCTTGATTAAAAGGTTTG+AGG | + | chr3_2:75613320-75613339 | None:intergenic | 25.0% |
| !!! | CTTCCTACATTTTAAAAAAG+AGG | + | chr3_2:75613546-75613565 | None:intergenic | 25.0% |
| ! | AAACAATCTACAAAACACAA+TGG | + | chr3_2:75613870-75613889 | None:intergenic | 25.0% |
| ! | TGAGAAAAATACATGATATG+AGG | + | chr3_2:75613940-75613959 | None:intergenic | 25.0% |
| !! | TCATGTATTTTTCTCATTTC+AGG | - | chr3_2:75613944-75613963 | Msa0425220:intron | 25.0% |
| !! | TGACATTTTTGTAAATCCAA+TGG | + | chr3_2:75614003-75614022 | None:intergenic | 25.0% |
| ! | TAGAGATTAGAGATAAGATA+TGG | - | chr3_2:75614370-75614389 | Msa0425220:intron | 25.0% |
| ! | TATAACTTAATTGAGCTTAC+CGG | - | chr3_2:75614672-75614691 | Msa0425220:intron | 25.0% |
| ! | GTATAATAAAACAAACTAGC+AGG | + | chr3_2:75614867-75614886 | None:intergenic | 25.0% |
| !! | TGTAGATTTTATGTAACTTG+TGG | - | chr3_2:75614945-75614964 | Msa0425220:intron | 25.0% |
| !!! | TGATCTTTATTTTGTTTGGT+AGG | - | chr3_2:75615071-75615090 | Msa0425220:intron | 25.0% |
| ! | TTTCAGATTTTCATCTGAAG+AGG | - | chr3_2:75612032-75612051 | Msa0425220:three_prime_UTR | 30.0% |
| TTGAAGCTTAAACAGAATCA+CGG | + | chr3_2:75612201-75612220 | None:intergenic | 30.0% | |
| AACCATTTAGCAACTATAAG+AGG | + | chr3_2:75612431-75612450 | None:intergenic | 30.0% | |
| ! | TTGTAGTTCTATTTGCTTTG+AGG | - | chr3_2:75612461-75612480 | Msa0425220:intron | 30.0% |
| TCACGAACACTAAAAAACAA+AGG | + | chr3_2:75612591-75612610 | None:intergenic | 30.0% | |
| !!! | TTGTTTTTTAGTGTTCGTGA+TGG | - | chr3_2:75612591-75612610 | Msa0425220:intron | 30.0% |
| TAATATTCTTTCATCTGGGA+GGG | - | chr3_2:75612686-75612705 | Msa0425220:intron | 30.0% | |
| ACATATGGTGAATACTGAAT+AGG | - | chr3_2:75612804-75612823 | Msa0425220:intron | 30.0% | |
| AGAGAAAAACAATAGCTGTT+TGG | - | chr3_2:75612851-75612870 | Msa0425220:intron | 30.0% | |
| CTCTATACTAGAAAGTTTCT+CGG | + | chr3_2:75612880-75612899 | None:intergenic | 30.0% | |
| ! | ACATGATAATGTTGATTGGT+TGG | - | chr3_2:75612903-75612922 | Msa0425220:intron | 30.0% |
| ACTACCACTCAATAATAAGA+CGG | + | chr3_2:75613126-75613145 | None:intergenic | 30.0% | |
| GAGAGAACATAAAGATCATA+CGG | - | chr3_2:75613200-75613219 | Msa0425220:CDS | 30.0% | |
| ! | AAAGTTTTCTCAGTTCTCAA+AGG | + | chr3_2:75613274-75613293 | None:intergenic | 30.0% |
| ! | AGGTTTGAGGAGTATAAATA+GGG | + | chr3_2:75613307-75613326 | None:intergenic | 30.0% |
| ! | AAGGTTTGAGGAGTATAAAT+AGG | + | chr3_2:75613308-75613327 | None:intergenic | 30.0% |
| TCTCAAGGTTATCTAAATGT+GGG | + | chr3_2:75613412-75613431 | None:intergenic | 30.0% | |
| ACATTTAGATAACCTTGAGA+CGG | - | chr3_2:75613412-75613431 | Msa0425220:CDS | 30.0% | |
| ! | AAACAAACCATTCTAGGAAA+TGG | - | chr3_2:75613446-75613465 | Msa0425220:CDS | 30.0% |
| TAATGACCAAAGTGAGAAAA+TGG | + | chr3_2:75613509-75613528 | None:intergenic | 30.0% | |
| TTTAAAAAAGAGGACGAATG+CGG | + | chr3_2:75613536-75613555 | None:intergenic | 30.0% | |
| !!! | CGTCCTCTTTTTTAAAATGT+AGG | - | chr3_2:75613540-75613559 | Msa0425220:intron | 30.0% |
| ! | GAAACTCTTCCATGTTTTAT+AGG | + | chr3_2:75613621-75613640 | None:intergenic | 30.0% |
| TAAAACATGGAAGAGTTTCT+AGG | - | chr3_2:75613622-75613641 | Msa0425220:intron | 30.0% | |
| AAACAAATCTTATTGCACCA+CGG | + | chr3_2:75613758-75613777 | None:intergenic | 30.0% | |
| !! | TGGTGCAATAAGATTTGTTT+TGG | - | chr3_2:75613758-75613777 | Msa0425220:intron | 30.0% |
| !!! | TGCAATAAGATTTGTTTTGG+CGG | - | chr3_2:75613761-75613780 | Msa0425220:intron | 30.0% |
| ! | TTTTGTAAATCCAATGGCAA+GGG | + | chr3_2:75613997-75614016 | None:intergenic | 30.0% |
| ! | TTTTTGTAAATCCAATGGCA+AGG | + | chr3_2:75613998-75614017 | None:intergenic | 30.0% |
| AAGAGGCTCTTCATTTATTT+GGG | + | chr3_2:75614104-75614123 | None:intergenic | 30.0% | |
| AAAGAGGCTCTTCATTTATT+TGG | + | chr3_2:75614105-75614124 | None:intergenic | 30.0% | |
| ! | TAAAGTGGAAAACTTGTTTG+TGG | + | chr3_2:75614287-75614306 | None:intergenic | 30.0% |
| TATACTACATGGCAATAAAG+TGG | + | chr3_2:75614302-75614321 | None:intergenic | 30.0% | |
| !!! | TAGCCCTATGTTTTATTTGA+GGG | + | chr3_2:75614341-75614360 | None:intergenic | 30.0% |
| !!! | TTAGCCCTATGTTTTATTTG+AGG | + | chr3_2:75614342-75614361 | None:intergenic | 30.0% |
| AATAAAACATAGGGCTAATG+TGG | - | chr3_2:75614344-75614363 | Msa0425220:intron | 30.0% | |
| CAATCATCAAAACTGAAACT+AGG | + | chr3_2:75614400-75614419 | None:intergenic | 30.0% | |
| TTTCAGAAAAGCAATCAACA+AGG | - | chr3_2:75614454-75614473 | Msa0425220:intron | 30.0% | |
| TTCAGAAAAGCAATCAACAA+GGG | - | chr3_2:75614455-75614474 | Msa0425220:intron | 30.0% | |
| AACTTGCATTATCTCAATGA+TGG | - | chr3_2:75614491-75614510 | Msa0425220:intron | 30.0% | |
| ATTATCTCAATGATGGTCTT+TGG | - | chr3_2:75614498-75614517 | Msa0425220:intron | 30.0% | |
| TATTAAAAATCAGCGGTAAC+CGG | + | chr3_2:75614694-75614713 | None:intergenic | 30.0% | |
| CTCATGTAAACAGTAAAGAA+AGG | - | chr3_2:75614886-75614905 | Msa0425220:intron | 30.0% | |
| CACACAAGTTTATTCAAAGA+TGG | - | chr3_2:75615038-75615057 | Msa0425220:intron | 30.0% | |
| CAAAATAAAGATCAAATGGC+AGG | + | chr3_2:75615065-75615084 | None:intergenic | 30.0% | |
| !!! | TCTTTATTTTGTTTGGTAGG+AGG | - | chr3_2:75615074-75615093 | Msa0425220:intron | 30.0% |
| TCACTAATTGTATGTGGGTT+TGG | - | chr3_2:75612173-75612192 | Msa0425220:three_prime_UTR | 35.0% | |
| !!! | ATGTTGTTTTTGCCTAACCA+CGG | - | chr3_2:75612222-75612241 | Msa0425220:three_prime_UTR | 35.0% |
| TTGGTGAATGAATGCATGTT+TGG | + | chr3_2:75612283-75612302 | None:intergenic | 35.0% | |
| ATTACTAAACTGCAGTATCC+AGG | - | chr3_2:75612365-75612384 | Msa0425220:CDS | 35.0% | |
| ACTATAAGAGGTGACTTCTT+GGG | + | chr3_2:75612419-75612438 | None:intergenic | 35.0% | |
| AACTATAAGAGGTGACTTCT+TGG | + | chr3_2:75612420-75612439 | None:intergenic | 35.0% | |
| CACCTCTTATAGTTGCTAAA+TGG | - | chr3_2:75612426-75612445 | Msa0425220:CDS | 35.0% | |
| GTAATATTCTTTCATCTGGG+AGG | - | chr3_2:75612685-75612704 | Msa0425220:intron | 35.0% | |
| AATATTCTTTCATCTGGGAG+GGG | - | chr3_2:75612687-75612706 | Msa0425220:intron | 35.0% | |
| TTCACCATATGTGTTGAACA+CGG | + | chr3_2:75612796-75612815 | None:intergenic | 35.0% | |
| AACTGTACTGTTCATACCAA+AGG | - | chr3_2:75612939-75612958 | Msa0425220:intron | 35.0% | |
| ACTGTACTGTTCATACCAAA+GGG | - | chr3_2:75612940-75612959 | Msa0425220:intron | 35.0% | |
| AGCAACATCAATGTTCTGAT+CGG | - | chr3_2:75612974-75612993 | Msa0425220:intron | 35.0% | |
| ! | GGTTTGAGGAGTATAAATAG+GGG | + | chr3_2:75613306-75613325 | None:intergenic | 35.0% |
| CTCAAGGTTATCTAAATGTG+GGG | + | chr3_2:75613411-75613430 | None:intergenic | 35.0% | |
| GTCTCAAGGTTATCTAAATG+TGG | + | chr3_2:75613413-75613432 | None:intergenic | 35.0% | |
| ! | AAACCATTCTAGGAAATGGA+GGG | - | chr3_2:75613450-75613469 | Msa0425220:CDS | 35.0% |
| ! | GTGCTTTTGGTCAAAGTATA+GGG | + | chr3_2:75613599-75613618 | None:intergenic | 35.0% |
| ! | CCATGTTTTATAGGTGCTTT+TGG | + | chr3_2:75613612-75613631 | None:intergenic | 35.0% |
| !! | CCAAAAGCACCTATAAAACA+TGG | - | chr3_2:75613609-75613628 | Msa0425220:intron | 35.0% |
| ! | AAGAAATTACAAGTTGACCG+TGG | - | chr3_2:75613738-75613757 | Msa0425220:intron | 35.0% |
| !!! | GCAATAAGATTTGTTTTGGC+GGG | - | chr3_2:75613762-75613781 | Msa0425220:intron | 35.0% |
| ! | ATGTCAACCAGAGAGTATAA+TGG | + | chr3_2:75614146-75614165 | None:intergenic | 35.0% |
| AGCTCCCTCAAATAAAACAT+AGG | - | chr3_2:75614334-75614353 | Msa0425220:intron | 35.0% | |
| GCTCCCTCAAATAAAACATA+GGG | - | chr3_2:75614335-75614354 | Msa0425220:intron | 35.0% | |
| AAGAAGTTCAACTACTTTCG+TGG | - | chr3_2:75614431-75614450 | Msa0425220:intron | 35.0% | |
| AAAGCAATCAACAAGGGAAT+TGG | - | chr3_2:75614461-75614480 | Msa0425220:intron | 35.0% | |
| AAGCAATCAACAAGGGAATT+GGG | - | chr3_2:75614462-75614481 | Msa0425220:intron | 35.0% | |
| ! | TGGAACTTGATCCAGATTTT+AGG | - | chr3_2:75614828-75614847 | Msa0425220:intron | 35.0% |
| ! | GGAACTTGATCCAGATTTTA+GGG | - | chr3_2:75614829-75614848 | Msa0425220:intron | 35.0% |
| ! | ATGTAACTTGTGGAATACAC+TGG | - | chr3_2:75614955-75614974 | Msa0425220:intron | 35.0% |
| ! | TGTAACTTGTGGAATACACT+GGG | - | chr3_2:75614956-75614975 | Msa0425220:intron | 35.0% |
| TTTGAATAAACTTGTGTGCG+TGG | + | chr3_2:75615036-75615055 | None:intergenic | 35.0% | |
| !! | ACGTCAAAGTATTGCAGATG+AGG | - | chr3_2:75612098-75612117 | Msa0425220:three_prime_UTR | 40.0% |
| ! | GGAAGTATATCATCCAACAC+TGG | + | chr3_2:75612398-75612417 | None:intergenic | 40.0% |
| ! | GGTTCTGACTACAAGAACAA+CGG | + | chr3_2:75612539-75612558 | None:intergenic | 40.0% |
| TAGTCAGAACCATCTCAATC+TGG | - | chr3_2:75612548-75612567 | Msa0425220:intron | 40.0% | |
| TGATCCGTGTTCAACACATA+TGG | - | chr3_2:75612789-75612808 | Msa0425220:intron | 40.0% | |
| GTTCATACCAAAGGGCTATA+AGG | - | chr3_2:75612948-75612967 | Msa0425220:intron | 40.0% | |
| CTTTCTCTCAAGCATAGTGA+TGG | - | chr3_2:75613052-75613071 | Msa0425220:intron | 40.0% | |
| ! | TCTGCCGTCTTATTATTGAG+TGG | - | chr3_2:75613119-75613138 | Msa0425220:intron | 40.0% |
| TTCTCAGTTCTCAAAGGTTC+AGG | + | chr3_2:75613268-75613287 | None:intergenic | 40.0% | |
| TTTAGATAACCTTGAGACGG+AGG | - | chr3_2:75613415-75613434 | Msa0425220:CDS | 40.0% | |
| TTAGATAACCTTGAGACGGA+GGG | - | chr3_2:75613416-75613435 | Msa0425220:CDS | 40.0% | |
| ! | CAAACCATTCTAGGAAATGG+AGG | - | chr3_2:75613449-75613468 | Msa0425220:CDS | 40.0% |
| ! | AACCATTCTAGGAAATGGAG+GGG | - | chr3_2:75613451-75613470 | Msa0425220:CDS | 40.0% |
| ! | ACAAGCCATTGTTATTGCCT+TGG | - | chr3_2:75613478-75613497 | Msa0425220:CDS | 40.0% |
| AACCACCAAGGCAATAACAA+TGG | + | chr3_2:75613486-75613505 | None:intergenic | 40.0% | |
| ! | GTGGTTCCATTTTCTCACTT+TGG | - | chr3_2:75613500-75613519 | Msa0425220:intron | 40.0% |
| ! | CTTTTGGTCAAAGTATAGGG+AGG | + | chr3_2:75613596-75613615 | None:intergenic | 40.0% |
| ! | GGTGCTTTTGGTCAAAGTAT+AGG | + | chr3_2:75613600-75613619 | None:intergenic | 40.0% |
| TTTCTCATTTCAGGCCATCA+TGG | - | chr3_2:75613953-75613972 | Msa0425220:intron | 40.0% | |
| ! | CCAGAGAGTATAATGGTAAG+AGG | + | chr3_2:75614139-75614158 | None:intergenic | 40.0% |
| CCTCTTACCATTATACTCTC+TGG | - | chr3_2:75614136-75614155 | Msa0425220:intron | 40.0% | |
| ! | AACTTGTTTGTGGAAGGAAG+TGG | + | chr3_2:75614277-75614296 | None:intergenic | 40.0% |
| ! | GTGGAAAACTTGTTTGTGGA+AGG | + | chr3_2:75614283-75614302 | None:intergenic | 40.0% |
| AGCAATCAACAAGGGAATTG+GGG | - | chr3_2:75614463-75614482 | Msa0425220:intron | 40.0% | |
| TCTCAATGATGGTCTTTGGA+AGG | - | chr3_2:75614502-75614521 | Msa0425220:intron | 40.0% | |
| TATTTGATGTGCTACCATCG+TGG | - | chr3_2:75614610-75614629 | Msa0425220:CDS | 40.0% | |
| AGAGATAAGAAAAGCCACGA+TGG | + | chr3_2:75614627-75614646 | None:intergenic | 40.0% | |
| TGGATCAAGTTCCAGAAAAC+AGG | + | chr3_2:75614822-75614841 | None:intergenic | 40.0% | |
| CGCTTATGATCCCTAAAATC+TGG | + | chr3_2:75614842-75614861 | None:intergenic | 40.0% | |
| AGTTCTGTACTCCTATTGAG+TGG | - | chr3_2:75615005-75615024 | Msa0425220:intron | 40.0% | |
| !!! | TTGTTTTTGCCTAACCACGG+TGG | - | chr3_2:75612225-75612244 | Msa0425220:three_prime_UTR | 45.0% |
| GAACCATCTCAATCTGGTTG+TGG | - | chr3_2:75612554-75612573 | Msa0425220:intron | 45.0% | |
| TCACCACAACCAGATTGAGA+TGG | + | chr3_2:75612560-75612579 | None:intergenic | 45.0% | |
| ACATTGATGGAGAAGTCGCA+AGG | + | chr3_2:75612631-75612650 | None:intergenic | 45.0% | |
| TGCTCAACCTTATAGCCCTT+TGG | + | chr3_2:75612958-75612977 | None:intergenic | 45.0% | |
| GGGGGAAAACAAACCATTCT+AGG | - | chr3_2:75613440-75613459 | Msa0425220:CDS | 45.0% | |
| ! | ACCATTCTAGGAAATGGAGG+GGG | - | chr3_2:75613452-75613471 | Msa0425220:CDS | 45.0% |
| ! | AGCCATTGTTATTGCCTTGG+TGG | - | chr3_2:75613481-75613500 | Msa0425220:intron | 45.0% |
| GTGAGAAAATGGAACCACCA+AGG | + | chr3_2:75613498-75613517 | None:intergenic | 45.0% | |
| CAGACATTATGCTCTGCAGT+TGG | - | chr3_2:75613653-75613672 | Msa0425220:intron | 45.0% | |
| GGTGCAAACATAATGTGTCC+TGG | - | chr3_2:75613783-75613802 | Msa0425220:intron | 45.0% | |
| AAACACAATGGCAGTACCAC+AGG | + | chr3_2:75613858-75613877 | None:intergenic | 45.0% | |
| ! | CTGTTTTCCTTCAGCCATGA+TGG | + | chr3_2:75613970-75613989 | None:intergenic | 45.0% |
| ! | AGAGGCAGAGTTTCTGAAAG+AGG | + | chr3_2:75614121-75614140 | None:intergenic | 45.0% |
| AGAGGTGGAGCTACATGTTT+AGG | - | chr3_2:75614240-75614259 | Msa0425220:intron | 45.0% | |
| GTGGAGCTACATGTTTAGGT+GGG | - | chr3_2:75614244-75614263 | Msa0425220:intron | 45.0% | |
| TGGAGCTACATGTTTAGGTG+GGG | - | chr3_2:75614245-75614264 | Msa0425220:intron | 45.0% | |
| TCCAGGACTTGAACCAGTGT+TGG | - | chr3_2:75612382-75612401 | Msa0425220:CDS | 50.0% | |
| !! | TCCAACACTGGTTCAAGTCC+TGG | + | chr3_2:75612386-75612405 | None:intergenic | 50.0% |
| AGTCGCAAGGTAGGCATGTA+CGG | + | chr3_2:75612618-75612637 | None:intergenic | 50.0% | |
| TGATGGAGAAGTCGCAAGGT+AGG | + | chr3_2:75612627-75612646 | None:intergenic | 50.0% | |
| ATAACCTTGAGACGGAGGGA+GGG | - | chr3_2:75613420-75613439 | Msa0425220:CDS | 50.0% | |
| TCCCCCTCCATTTCCTAGAA+TGG | + | chr3_2:75613456-75613475 | None:intergenic | 50.0% | |
| !! | TGTCCTGGTCTTACATCTCC+TGG | - | chr3_2:75613798-75613817 | Msa0425220:intron | 50.0% |
| !! | GTCCTGGTCTTACATCTCCT+GGG | - | chr3_2:75613799-75613818 | Msa0425220:intron | 50.0% |
| !! | TCCTGGTCTTACATCTCCTG+GGG | - | chr3_2:75613800-75613819 | Msa0425220:intron | 50.0% |
| ! | GGTGTTCTGGATGAGGAAGT+GGG | - | chr3_2:75613822-75613841 | Msa0425220:intron | 50.0% |
| ! | GTGTTCTGGATGAGGAAGTG+GGG | - | chr3_2:75613823-75613842 | Msa0425220:intron | 50.0% |
| ! | TGTTCTGGATGAGGAAGTGG+GGG | - | chr3_2:75613824-75613843 | Msa0425220:intron | 50.0% |
| TTTCAGGCCATCATGGCTGA+AGG | - | chr3_2:75613960-75613979 | Msa0425220:intron | 50.0% | |
| AAACAGCATGCCCTTGCCAT+TGG | - | chr3_2:75613984-75614003 | Msa0425220:intron | 50.0% | |
| CCTCTAATTGCACGAGGTTG+TGG | + | chr3_2:75614225-75614244 | None:intergenic | 50.0% | |
| CCACAACCTCGTGCAATTAG+AGG | - | chr3_2:75614222-75614241 | Msa0425220:intron | 50.0% | |
| CAACCTCGTGCAATTAGAGG+TGG | - | chr3_2:75614225-75614244 | Msa0425220:intron | 50.0% | |
| GGTGGAGCTACATGTTTAGG+TGG | - | chr3_2:75614243-75614262 | Msa0425220:intron | 50.0% | |
| GGAGCTACATGTTTAGGTGG+GGG | - | chr3_2:75614246-75614265 | Msa0425220:intron | 50.0% | |
| ACAGGACTGCATCCCTAAGT+TGG | + | chr3_2:75614804-75614823 | None:intergenic | 50.0% | |
| ! | AGGGATGCAGTCCTGTTTTC+TGG | - | chr3_2:75614808-75614827 | Msa0425220:CDS | 50.0% |
| AGAATCACGATGAGCCACCG+TGG | + | chr3_2:75612242-75612261 | None:intergenic | 55.0% | |
| GATAACCTTGAGACGGAGGG+AGG | - | chr3_2:75613419-75613438 | Msa0425220:CDS | 55.0% | |
| TAACCTTGAGACGGAGGGAG+GGG | - | chr3_2:75613421-75613440 | Msa0425220:CDS | 55.0% | |
| !! | CCTGGTCTTACATCTCCTGG+GGG | - | chr3_2:75613801-75613820 | Msa0425220:intron | 55.0% |
| !! | TACATCTCCTGGGGGTGTTC+TGG | - | chr3_2:75613809-75613828 | Msa0425220:intron | 55.0% |
| ! | GGGTGTTCTGGATGAGGAAG+TGG | - | chr3_2:75613821-75613840 | Msa0425220:intron | 55.0% |
| GCTCCACCTCTAATTGCACG+AGG | + | chr3_2:75614231-75614250 | None:intergenic | 55.0% | |
| AGAGCCGCGATGCCAACTTA+GGG | - | chr3_2:75614789-75614808 | Msa0425220:CDS | 55.0% | |
| ! | GCATCCCTAAGTTGGCATCG+CGG | + | chr3_2:75614796-75614815 | None:intergenic | 55.0% |
| GCGTGGTTCAGCCACTCAAT+AGG | + | chr3_2:75615019-75615038 | None:intergenic | 55.0% | |
| CACGATGAGCCACCGTGGTT+AGG | + | chr3_2:75612237-75612256 | None:intergenic | 60.0% | |
| AACCTTGAGACGGAGGGAGG+GGG | - | chr3_2:75613422-75613441 | Msa0425220:CDS | 60.0% | |
| CCCCCAGGAGATGTAAGACC+AGG | + | chr3_2:75613804-75613823 | None:intergenic | 60.0% | |
| !! | TCCTGGGGGTGTTCTGGATG+AGG | - | chr3_2:75613815-75613834 | Msa0425220:intron | 60.0% |
| TCCTCATCCAGAACACCCCC+AGG | + | chr3_2:75613819-75613838 | None:intergenic | 60.0% | |
| AGTGGGGGCAGAATGTCCTG+TGG | - | chr3_2:75613839-75613858 | Msa0425220:intron | 60.0% | |
| GAGAGCCGCGATGCCAACTT+AGG | - | chr3_2:75614788-75614807 | Msa0425220:CDS | 60.0% | |
| TTCCCCCTCCCTCCGTCTCA+AGG | + | chr3_2:75613427-75613446 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 75612027 | 75615195 | 75612027 | ID=Msa0425220;Name=Msa0425220 |
| chr3_2 | mRNA | 75612027 | 75615195 | 75612027 | ID=Msa0425220-mRNA-1;Parent=Msa0425220;Name=Msa0425220-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.83|0.71|1|0.66|0.85|7|324|223 |
| chr3_2 | exon | 75612027 | 75612468 | 75612027 | ID=Msa0425220-mRNA-1:exon:19408;Parent=Msa0425220-mRNA-1 |
| chr3_2 | exon | 75612699 | 75612788 | 75612699 | ID=Msa0425220-mRNA-1:exon:19407;Parent=Msa0425220-mRNA-1 |
| chr3_2 | exon | 75613189 | 75613256 | 75613189 | ID=Msa0425220-mRNA-1:exon:19406;Parent=Msa0425220-mRNA-1 |
| chr3_2 | exon | 75613362 | 75613498 | 75613362 | ID=Msa0425220-mRNA-1:exon:19405;Parent=Msa0425220-mRNA-1 |
| chr3_2 | exon | 75614574 | 75614671 | 75614574 | ID=Msa0425220-mRNA-1:exon:19404;Parent=Msa0425220-mRNA-1 |
| chr3_2 | exon | 75614775 | 75614842 | 75614775 | ID=Msa0425220-mRNA-1:exon:19403;Parent=Msa0425220-mRNA-1 |
| chr3_2 | exon | 75615103 | 75615195 | 75615103 | ID=Msa0425220-mRNA-1:exon:19402;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75615103 | 75615195 | 75615103 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75614775 | 75614842 | 75614775 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75614574 | 75614671 | 75614574 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75613362 | 75613498 | 75613362 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75613189 | 75613256 | 75613189 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75612699 | 75612788 | 75612699 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | CDS | 75612351 | 75612468 | 75612351 | ID=Msa0425220-mRNA-1:cds;Parent=Msa0425220-mRNA-1 |
| chr3_2 | three_prime_UTR | 75612027 | 75612350 | 75612027 | ID=Msa0425220-mRNA-1:three_prime_utr;Parent=Msa0425220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
