Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783760 | G7K7B5 | 98.574 | 561 | 8 | 0 | 13 | 573 | 1 | 561 | 0.0 | 1159 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012240 | Msa0783760 | -0.815013 | 1.149250e-51 | -8.615850e-47 |
| Msa0027260 | Msa0783760 | -0.801911 | 7.199846e-49 | -8.615850e-47 |
| Msa0103000 | Msa0783760 | -0.800880 | 1.171291e-48 | -8.615850e-47 |
| Msa0647500 | Msa0783760 | -0.800674 | 1.290265e-48 | -8.615850e-47 |
| Msa0654760 | Msa0783760 | 0.825725 | 4.007614e-54 | -8.615850e-47 |
| Msa0677290 | Msa0783760 | -0.812889 | 3.378246e-51 | -8.615850e-47 |
| Msa0697670 | Msa0783760 | -0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0709500 | Msa0783760 | -0.804107 | 2.532197e-49 | -8.615850e-47 |
| Msa0717920 | Msa0783760 | 0.817520 | 3.160591e-52 | -8.615850e-47 |
| Msa0734660 | Msa0783760 | -0.816831 | 4.515539e-52 | -8.615850e-47 |
| Msa0738630 | Msa0783760 | 0.995563 | 1.563771e-217 | -8.615850e-47 |
| Msa0776220 | Msa0783760 | -0.812051 | 5.149780e-51 | -8.615850e-47 |
| Msa0783760 | Msa0790850 | -0.807264 | 5.502519e-50 | -8.615850e-47 |
| Msa0783760 | Msa0813320 | 0.821215 | 4.545200e-53 | -8.615850e-47 |
| Msa0783760 | Msa0813670 | -0.823033 | 1.722383e-53 | -8.615850e-47 |
| Msa0783760 | Msa0813720 | -0.809995 | 1.435972e-50 | -8.615850e-47 |
| Msa0783760 | Msa0818980 | 0.996917 | 4.206177e-234 | -8.615850e-47 |
| Msa0783760 | Msa0819030 | 0.994432 | 3.331477e-207 | -8.615850e-47 |
| Msa0783760 | Msa0836660 | 0.814147 | 1.786468e-51 | -8.615850e-47 |
| Msa0783760 | Msa0854120 | -0.818410 | 1.988850e-52 | -8.615850e-47 |
| Msa0783760 | Msa0867050 | 0.813565 | 2.400034e-51 | -8.615850e-47 |
| Msa0783760 | Msa0902760 | -0.822443 | 2.362360e-53 | -8.615850e-47 |
| Msa0783760 | Msa0967650 | 0.833806 | 4.316300e-56 | -8.615850e-47 |
| Msa0783760 | Msa1003310 | -0.804338 | 2.266236e-49 | -8.615850e-47 |
| Msa0783760 | Msa1013400 | -0.832771 | 7.817141e-56 | -8.615850e-47 |
| Msa0783760 | Msa1014500 | -0.809757 | 1.615723e-50 | -8.615850e-47 |
| Msa0783760 | Msa1040400 | -0.819464 | 1.145657e-52 | -8.615850e-47 |
| Msa0783760 | Msa1066490 | -0.804687 | 1.916846e-49 | -8.615850e-47 |
| Msa0783760 | Msa1081150 | -0.816511 | 5.326439e-52 | -8.615850e-47 |
| Msa0783760 | Msa1093530 | -0.821288 | 4.372128e-53 | -8.615850e-47 |
| Msa0783760 | Msa1104140 | -0.814042 | 1.883927e-51 | -8.615850e-47 |
| Msa0783760 | Msa1125760 | -0.808574 | 2.897341e-50 | -8.615850e-47 |
| Msa0783760 | Msa1126510 | -0.824051 | 9.949343e-54 | -8.615850e-47 |
| Msa0783760 | Msa1134110 | -0.800832 | 1.197772e-48 | -8.615850e-47 |
| Msa0783760 | Msa1166860 | -0.834150 | 3.540119e-56 | -8.615850e-47 |
| Msa0783760 | Msa1171360 | -0.804901 | 1.728952e-49 | -8.615850e-47 |
| Msa0783760 | Msa1181850 | -0.825662 | 4.147824e-54 | -8.615850e-47 |
| Msa0783760 | Msa1181860 | -0.819301 | 1.248185e-52 | -8.615850e-47 |
| Msa0783760 | Msa1187840 | -0.802621 | 5.142234e-49 | -8.615850e-47 |
| Msa0783760 | Msa1193070 | -0.804700 | 1.904877e-49 | -8.615850e-47 |
| Msa0783760 | Msa1207270 | -0.815707 | 8.054142e-52 | -8.615850e-47 |
| Msa0783760 | Msa1211890 | -0.804692 | 1.911856e-49 | -8.615850e-47 |
| Msa0783760 | Msa1218600 | -0.812151 | 4.898087e-51 | -8.615850e-47 |
| Msa0783760 | Msa1257510 | -0.804783 | 1.830511e-49 | -8.615850e-47 |
| Msa0783760 | Msa1283170 | -0.809633 | 1.718116e-50 | -8.615850e-47 |
| Msa0783760 | Msa1316780 | -0.800738 | 1.251627e-48 | -8.615850e-47 |
| Msa0783760 | Msa1379760 | -0.804593 | 2.005483e-49 | -8.615850e-47 |
| Msa0783760 | Msa1392200 | -0.810268 | 1.254340e-50 | -8.615850e-47 |
| Msa0783760 | Msa1396750 | 0.829366 | 5.358326e-55 | -8.615850e-47 |
| Msa0783760 | Msa1410430 | 0.814627 | 1.399310e-51 | -8.615850e-47 |
| Msa0783760 | Msa1417870 | -0.805030 | 1.625250e-49 | -8.615850e-47 |
| Msa0783760 | Msa1448690 | -0.807929 | 3.974605e-50 | -8.615850e-47 |
| Msa0140570 | Msa0783760 | -0.806156 | 9.430576e-50 | -8.615850e-47 |
| Msa0173740 | Msa0783760 | -0.801651 | 8.141744e-49 | -8.615850e-47 |
| Msa0173820 | Msa0783760 | -0.807173 | 5.751132e-50 | -8.615850e-47 |
| Msa0173830 | Msa0783760 | -0.817313 | 3.518971e-52 | -8.615850e-47 |
| Msa0174730 | Msa0783760 | -0.801314 | 9.544499e-49 | -8.615850e-47 |
| Msa0187930 | Msa0783760 | -0.800278 | 1.553583e-48 | -8.615850e-47 |
| Msa0193120 | Msa0783760 | -0.805386 | 1.368484e-49 | -8.615850e-47 |
| Msa0199880 | Msa0783760 | -0.806732 | 7.129727e-50 | -8.615850e-47 |
| Msa0220720 | Msa0783760 | -0.800406 | 1.462936e-48 | -8.615850e-47 |
| Msa0238070 | Msa0783760 | 0.839578 | 1.457273e-57 | -8.615850e-47 |
| Msa0366890 | Msa0783760 | -0.809749 | 1.622407e-50 | -8.615850e-47 |
| Msa0376450 | Msa0783760 | 0.834696 | 2.581152e-56 | -8.615850e-47 |
| Msa0395960 | Msa0783760 | -0.810800 | 9.626532e-51 | -8.615850e-47 |
| Msa0398950 | Msa0783760 | -0.801881 | 7.304658e-49 | -8.615850e-47 |
| Msa0430620 | Msa0783760 | -0.808273 | 3.358664e-50 | -8.615850e-47 |
| Msa0436050 | Msa0783760 | -0.804011 | 2.650989e-49 | -8.615850e-47 |
| Msa0465790 | Msa0783760 | -0.817321 | 3.504551e-52 | -8.615850e-47 |
| Msa0471440 | Msa0783760 | -0.825314 | 5.016050e-54 | -8.615850e-47 |
| Msa0471720 | Msa0783760 | 0.832473 | 9.264226e-56 | -8.615850e-47 |
| Msa0244780 | Msa0783760 | -0.802037 | 6.782952e-49 | -8.615850e-47 |
| Msa0264570 | Msa0783760 | -0.817332 | 3.483607e-52 | -8.615850e-47 |
| Msa0268130 | Msa0783760 | -0.811744 | 6.006722e-51 | -8.615850e-47 |
| Msa0280610 | Msa0783760 | -0.821248 | 4.466548e-53 | -8.615850e-47 |
| Msa0298990 | Msa0783760 | -0.810617 | 1.054321e-50 | -8.615850e-47 |
| Msa0337240 | Msa0783760 | -0.800410 | 1.460215e-48 | -8.615850e-47 |
| Msa0358170 | Msa0783760 | -0.812558 | 3.991974e-51 | -8.615850e-47 |
| Msa0483860 | Msa0783760 | -0.822340 | 2.496704e-53 | -8.615850e-47 |
| Msa0491020 | Msa0783760 | -0.811606 | 6.436471e-51 | -8.615850e-47 |
| Msa0516510 | Msa0783760 | 0.831284 | 1.820999e-55 | -8.615850e-47 |
| Msa0561540 | Msa0783760 | 0.819199 | 1.316777e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783760 | MtrunA17_Chr5g0437931 | 98.417 | 379 | 6 | 0 | 13 | 391 | 1 | 379 | 0.0 | 782 |
| Msa0783760 | MtrunA17_Chr3g0114311 | 63.186 | 565 | 141 | 6 | 13 | 573 | 1 | 502 | 0.0 | 654 |
| Msa0783760 | MtrunA17_Chr3g0114321 | 66.667 | 483 | 133 | 5 | 13 | 491 | 1 | 459 | 0.0 | 632 |
| Msa0783760 | MtrunA17_Chr5g0437921 | 98.684 | 152 | 2 | 0 | 422 | 573 | 1 | 152 | 2.82e-106 | 315 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0783760 | AT3G10980.1 | 59.298 | 570 | 206 | 10 | 17 | 572 | 6 | 563 | 0.0 | 631 |
| Msa0783760 | AT5G05350.1 | 56.929 | 534 | 199 | 7 | 42 | 572 | 20 | 525 | 0.0 | 598 |
Find 118 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGTTCTAGCAGTTTCTTTA+TGG | 0.127897 | 5_2:-67922575 | Msa0783760:CDS |
| ATCTTATGCGTTGCTGTTTC+AGG | 0.172175 | 5_2:-67923738 | Msa0783760:CDS |
| CGCATAAGATCCACGCAAAA+AGG | 0.191675 | 5_2:+67923751 | None:intergenic |
| CTAAGTTTGGCGATATCTTT+TGG | 0.228804 | 5_2:+67923540 | None:intergenic |
| CTAGGTAAAGATTATGATTC+TGG | 0.262677 | 5_2:-67923297 | Msa0783760:CDS |
| GCATTCCTTGCCGACTTCTT+TGG | 0.266606 | 5_2:+67923669 | None:intergenic |
| TTTCGGCAAGCCTGCGGTTT+CGG | 0.267613 | 5_2:-67922827 | Msa0783760:CDS |
| TTGAAGAAGTTGATCCTATT+AGG | 0.274814 | 5_2:+67923960 | None:intergenic |
| AATTATACCTCTTTCTCATT+TGG | 0.282202 | 5_2:+67922869 | None:intergenic |
| AGTGGCAAGACGCTTGAATT+TGG | 0.310045 | 5_2:+67923920 | None:intergenic |
| CACTTTGGCTATTCTGTTGT+TGG | 0.321220 | 5_2:-67922798 | Msa0783760:CDS |
| GCAGTACTCCTTTCTAAGTT+TGG | 0.322615 | 5_2:+67923527 | None:intergenic |
| TTGTGCATTTGGTTGGAATA+TGG | 0.330037 | 5_2:-67923076 | Msa0783760:CDS |
| CCTACTTATGACTTCTGTTT+CGG | 0.336304 | 5_2:-67922844 | Msa0783760:CDS |
| GTGGAGGAATACTTGACATT+TGG | 0.338866 | 5_2:-67923140 | Msa0783760:CDS |
| TCGAGAACTTGAAATATCTA+TGG | 0.347292 | 5_2:+67924043 | None:intergenic |
| AGGAGAACTTGTCCCAGATT+TGG | 0.348843 | 5_2:+67922645 | None:intergenic |
| GGTGTGTCATCAACCAAATC+TGG | 0.354088 | 5_2:-67922658 | Msa0783760:CDS |
| ATTGAGGAATGTAACAATAA+TGG | 0.360036 | 5_2:-67924089 | Msa0783760:CDS |
| CATTGAGTGCTATTCCTAAT+AGG | 0.364914 | 5_2:-67923974 | Msa0783760:CDS |
| ACTTCATAACATAATGGTTT+CGG | 0.365084 | 5_2:-67924135 | Msa0783760:CDS |
| ATGGTTTCGGTTGATAATAA+TGG | 0.365993 | 5_2:-67924122 | Msa0783760:CDS |
| ATCGGTGCACCTGCAATTGC+TGG | 0.371089 | 5_2:-67923342 | Msa0783760:CDS |
| CACTTTGTGGTCTAAACTTA+GGG | 0.372572 | 5_2:-67923419 | Msa0783760:CDS |
| GCACTTTGTGGTCTAAACTT+AGG | 0.372663 | 5_2:-67923420 | Msa0783760:CDS |
| AGGATCAACTTCTTCAAAAT+CGG | 0.383821 | 5_2:-67923954 | Msa0783760:CDS |
| AAGAAACTGCTAGAACTTAG+AGG | 0.389392 | 5_2:+67922580 | None:intergenic |
| TTTGCTCAATATGCACTTTG+TGG | 0.392887 | 5_2:-67923432 | Msa0783760:CDS |
| AGATGACAATAGAATGGATT+AGG | 0.399686 | 5_2:-67923791 | Msa0783760:CDS |
| CTTTGTATCACCGGCGGAGT+TGG | 0.401446 | 5_2:+67922472 | None:intergenic |
| GCTTAGACTTCATAACATAA+TGG | 0.404890 | 5_2:-67924141 | Msa0783760:CDS |
| TGGAGGAATACTTGACATTT+GGG | 0.407333 | 5_2:-67923139 | Msa0783760:CDS |
| CTTGACGGTTTGAAAGTAGA+AGG | 0.422675 | 5_2:+67922604 | None:intergenic |
| TTTATCATCTACAATATGAT+AGG | 0.429440 | 5_2:+67922741 | None:intergenic |
| GAGCGCCCGGCCATCGGTGT+TGG | 0.439028 | 5_2:-67923384 | Msa0783760:CDS |
| GCCAAGATGAAAATCCAAAA+GGG | 0.440423 | 5_2:+67922991 | None:intergenic |
| ATATTGAGGATGACACTGTT+AGG | 0.445757 | 5_2:-67922960 | Msa0783760:CDS |
| CTTGCTCAAGAAATGCGAAC+GGG | 0.448066 | 5_2:-67922769 | Msa0783760:CDS |
| GTATATAGACCAGCAATTGC+AGG | 0.456063 | 5_2:+67923333 | None:intergenic |
| AGGCAATGTCTAGTAGGTGC+TGG | 0.460261 | 5_2:-67922940 | Msa0783760:CDS |
| ACAAGATGGTAGAATAACTT+TGG | 0.464879 | 5_2:+67923582 | None:intergenic |
| AGAAAGGAGTACTGCAAGAA+TGG | 0.467535 | 5_2:-67923519 | Msa0783760:CDS |
| AATATGGAGAGACTTGGCTT+TGG | 0.469184 | 5_2:-67923060 | Msa0783760:CDS |
| CTTGGCTGCTGTTAATATTG+AGG | 0.476409 | 5_2:-67922974 | Msa0783760:CDS |
| CTAGAACTTAGAGGACTTGA+CGG | 0.477113 | 5_2:+67922589 | None:intergenic |
| ATCCTGTTCCTTGTCATGAC+TGG | 0.479597 | 5_2:-67923711 | Msa0783760:CDS |
| TGTATCACCGGCGGAGTTGG+TGG | 0.481477 | 5_2:+67922475 | None:intergenic |
| AATCTTTACCTAGAGGACTA+AGG | 0.482009 | 5_2:+67923307 | None:intergenic |
| TCGCGACGCAGAGGTGAAAT+CGG | 0.484106 | 5_2:+67922682 | None:intergenic |
| TCATGAATGGAAACACATAA+TGG | 0.490549 | 5_2:-67923484 | Msa0783760:CDS |
| TACCAGTCATGACAAGGAAC+AGG | 0.492780 | 5_2:+67923709 | None:intergenic |
| GAACTTATAAGCCTCATGAA+TGG | 0.495861 | 5_2:-67923497 | Msa0783760:CDS |
| CATATTCCAACACCGATGGC+CGG | 0.496400 | 5_2:+67923378 | None:intergenic |
| TGAAGAAGATGACAATAGAA+TGG | 0.501131 | 5_2:-67923797 | Msa0783760:CDS |
| AGATATCGCCAAACTTAGAA+AGG | 0.504835 | 5_2:-67923535 | Msa0783760:CDS |
| ACGGAAGATAGTGGACCATC+TGG | 0.504935 | 5_2:+67922541 | None:intergenic |
| GGAGATTCTCTTTGTATCAC+CGG | 0.509159 | 5_2:+67922463 | None:intergenic |
| GGAGGATCCAAATGAGAAAG+AGG | 0.509367 | 5_2:-67922876 | Msa0783760:CDS |
| AGTATTCCTCCACTCCACTT+TGG | 0.512153 | 5_2:+67923150 | None:intergenic |
| ATATTCCAACACCGATGGCC+GGG | 0.512263 | 5_2:+67923379 | None:intergenic |
| AGCCAAGATGAAAATCCAAA+AGG | 0.513987 | 5_2:+67922990 | None:intergenic |
| TATACAATCCTTAGTCCTCT+AGG | 0.515282 | 5_2:-67923315 | Msa0783760:CDS |
| TCTGGGACAAGTTCTCCTCT+TGG | 0.516682 | 5_2:-67922640 | Msa0783760:CDS |
| GGAATAGCACTCAATGTGCT+CGG | 0.531235 | 5_2:+67923981 | None:intergenic |
| GGTTGGAATATGGAGAGACT+TGG | 0.540609 | 5_2:-67923066 | Msa0783760:CDS |
| CGGTTTCGGACTGCACACTT+TGG | 0.541886 | 5_2:-67922813 | Msa0783760:CDS |
| ATCTTGTACTTCTGTGCCGA+TGG | 0.543050 | 5_2:-67923566 | Msa0783760:CDS |
| CAAGCGTCTTGCCACTCAGA+TGG | 0.543275 | 5_2:-67923913 | Msa0783760:CDS |
| TTATGCGTTGCTGTTTCAGG+TGG | 0.547321 | 5_2:-67923735 | Msa0783760:CDS |
| GGCAATGTCTAGTAGGTGCT+GGG | 0.548348 | 5_2:-67922939 | Msa0783760:CDS |
| ATAATGGTAGTGGTAATTCT+CGG | 0.552969 | 5_2:-67923468 | Msa0783760:CDS |
| TAATGGTAAAGATGAAATTG+AGG | 0.553613 | 5_2:-67924105 | Msa0783760:CDS |
| ATTATGTGTTTCCATTCATG+AGG | 0.556074 | 5_2:+67923486 | None:intergenic |
| GAATAGCACTCAATGTGCTC+GGG | 0.557900 | 5_2:+67923982 | None:intergenic |
| CCGAAACAGAAGTCATAAGT+AGG | 0.558846 | 5_2:+67922844 | None:intergenic |
| TTCAAGTTCTCGAAGAGCAA+TGG | 0.559290 | 5_2:-67924033 | Msa0783760:CDS |
| AAGGCACAGATTGTGAAGCC+TGG | 0.561142 | 5_2:+67923889 | None:intergenic |
| AGATCTGAGCGCCCGGCCAT+CGG | 0.567721 | 5_2:-67923390 | Msa0783760:CDS |
| ATGGAAACACATAATGGTAG+TGG | 0.568927 | 5_2:-67923478 | Msa0783760:CDS |
| AGAAGTCGGCAAGGAATGCA+TGG | 0.573813 | 5_2:-67923665 | Msa0783760:CDS |
| CTTCTGTTTCGGCAAGCCTG+CGG | 0.574737 | 5_2:-67922833 | Msa0783760:CDS |
| GTGTGTCATCAACCAAATCT+GGG | 0.575863 | 5_2:-67922657 | Msa0783760:CDS |
| ATTTCACCTCTGCGTCGCGA+AGG | 0.576158 | 5_2:-67922679 | Msa0783760:CDS |
| AAGCTATGTGAACTCGGAGA+AGG | 0.576858 | 5_2:+67923870 | None:intergenic |
| TTCTGTGATTCCAAAGAAGT+CGG | 0.578176 | 5_2:-67923679 | Msa0783760:CDS |
| TCTCTTAAGCTATGTGAACT+CGG | 0.578236 | 5_2:+67923864 | None:intergenic |
| ATGGAATATCATAGTCCAGA+TGG | 0.578861 | 5_2:-67922556 | Msa0783760:CDS |
| GTATAAAAGATCTGAGCGCC+CGG | 0.584269 | 5_2:-67923397 | Msa0783760:CDS |
| TGGATCGGACGAAGAATCAC+AGG | 0.586235 | 5_2:-67923277 | Msa0783760:CDS |
| ACTGTTAGGCAATGTCTAGT+AGG | 0.586758 | 5_2:-67922946 | Msa0783760:CDS |
| CATACAGAAAAGCATAAAAG+TGG | 0.591275 | 5_2:+67923017 | None:intergenic |
| TTGCTCAAGAAATGCGAACG+GGG | 0.591460 | 5_2:-67922768 | Msa0783760:CDS |
| TCTTGCCACTCAGATGGACC+AGG | 0.594178 | 5_2:-67923907 | Msa0783760:CDS |
| GCAGAGGTGAAATCGGCGGT+TGG | 0.594442 | 5_2:+67922689 | None:intergenic |
| AATGATTCCACCAACTCCGC+CGG | 0.599929 | 5_2:-67922482 | Msa0783760:CDS |
| GTGCTCGGGAACTTTCTACC+AGG | 0.603559 | 5_2:+67923996 | None:intergenic |
| TCTTGCTCAAGAAATGCGAA+CGG | 0.603658 | 5_2:-67922770 | Msa0783760:CDS |
| TAAAGATTATGATTCTGGAT+CGG | 0.607721 | 5_2:-67923292 | Msa0783760:CDS |
| CCAAGATGAAAATCCAAAAG+GGG | 0.608853 | 5_2:+67922992 | None:intergenic |
| TGCTCAAGAAATGCGAACGG+GGG | 0.610733 | 5_2:-67922767 | Msa0783760:CDS |
| GATTAGGAACCCGATGAACA+TGG | 0.611445 | 5_2:-67923775 | Msa0783760:CDS |
| TGAGACTGAAATCATTTGAG+AGG | 0.616878 | 5_2:-67923221 | Msa0783760:CDS |
| CAGTCGAAAATAGACCAAAG+TGG | 0.632679 | 5_2:-67923164 | Msa0783760:CDS |
| AATAGACCAAAGTGGAGTGG+AGG | 0.635594 | 5_2:-67923156 | Msa0783760:CDS |
| ATGGTGACAGATGAAAATCC+TGG | 0.643050 | 5_2:-67924014 | Msa0783760:CDS |
| ATCGGCACAGAAGTACAAGA+TGG | 0.645219 | 5_2:+67923568 | None:intergenic |
| GACACACCTTCGCGACGCAG+AGG | 0.651096 | 5_2:+67922673 | None:intergenic |
| TGATTCCAAAGAAGTCGGCA+AGG | 0.653679 | 5_2:-67923674 | Msa0783760:CDS |
| AGTGTGCAGTCCGAAACCGC+AGG | 0.654614 | 5_2:+67922817 | None:intergenic |
| TCAACATACCAGTCATGACA+AGG | 0.654796 | 5_2:+67923703 | None:intergenic |
| GATTCTCTTTGTATCACCGG+CGG | 0.656253 | 5_2:+67922466 | None:intergenic |
| GAAAATAGACCAAAGTGGAG+TGG | 0.658100 | 5_2:-67923159 | Msa0783760:CDS |
| TATACATATTCCAACACCGA+TGG | 0.667440 | 5_2:+67923374 | None:intergenic |
| GGAGACGAGTTGACACCAAG+AGG | 0.669536 | 5_2:+67922625 | None:intergenic |
| GAATCATAATCTTTACCTAG+AGG | 0.677371 | 5_2:+67923300 | None:intergenic |
| CAAGATGAAAATCCAAAAGG+GGG | 0.678756 | 5_2:+67922993 | None:intergenic |
| CGACGCAGAGGTGAAATCGG+CGG | 0.690132 | 5_2:+67922685 | None:intergenic |
| TGAAGCCTGGTCCATCTGAG+TGG | 0.740360 | 5_2:+67923902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAGATCTTTTTTTTTTT+TGG | - | chr5_2:67922796-67922815 | Msa0783760:CDS | 10.0% |
| !! | ATGAAAAAATCAAAAATTGA+AGG | + | chr5_2:67922602-67922621 | None:intergenic | 15.0% |
| !!! | AATTTTTGATTTTTTCATCT+GGG | - | chr5_2:67922604-67922623 | Msa0783760:CDS | 15.0% |
| !!! | TATGTTGCTATTATTAAAAT+TGG | - | chr5_2:67922690-67922709 | Msa0783760:CDS | 15.0% |
| !! | TTTATTAAGATCTATTTACT+AGG | - | chr5_2:67922899-67922918 | Msa0783760:CDS | 15.0% |
| !! | TATAACAAAAACTATTAAGA+AGG | - | chr5_2:67923205-67923224 | Msa0783760:CDS | 15.0% |
| !!! | CAATTTTTGATTTTTTCATC+TGG | - | chr5_2:67922603-67922622 | Msa0783760:CDS | 20.0% |
| !! | TGCTATTATTAAAATTGGAT+TGG | - | chr5_2:67922695-67922714 | Msa0783760:CDS | 20.0% |
| !!! | ATTAAAATTGGATTGGATAT+TGG | - | chr5_2:67922702-67922721 | Msa0783760:CDS | 20.0% |
| !!! | TTAAAATTGGATTGGATATT+GGG | - | chr5_2:67922703-67922722 | Msa0783760:CDS | 20.0% |
| !! | ATGTGAATTGTGAATTTAAT+TGG | - | chr5_2:67922759-67922778 | Msa0783760:CDS | 20.0% |
| !!! | AAGATCTTTTTTTTTTTTGG+TGG | - | chr5_2:67922799-67922818 | Msa0783760:CDS | 20.0% |
| !!! | TTCTATCATTTTTCTACAAT+AGG | + | chr5_2:67923069-67923088 | None:intergenic | 20.0% |
| !!! | GTTTTTGTTATAGTTTTTCT+AGG | + | chr5_2:67923197-67923216 | None:intergenic | 20.0% |
| !! | TGATATATGATAGAACATTA+TGG | - | chr5_2:67923258-67923277 | Msa0783760:CDS | 20.0% |
| !! | TTTATCATCTACAATATGAT+AGG | + | chr5_2:67924900-67924919 | None:intergenic | 20.0% |
| ! | TATCAGCATATTTGATTACT+AGG | - | chr5_2:67922649-67922668 | Msa0783760:CDS | 25.0% |
| ! | ATCAGCATATTTGATTACTA+GGG | - | chr5_2:67922650-67922669 | Msa0783760:CDS | 25.0% |
| !!! | ATCTTTTTTTTTTTTGGTGG+TGG | - | chr5_2:67922802-67922821 | Msa0783760:CDS | 25.0% |
| ! | GATAATGCATAAAATATGCA+AGG | + | chr5_2:67922847-67922866 | None:intergenic | 25.0% |
| ! | TAGTGATTAATGAGTTAGAT+AGG | - | chr5_2:67923231-67923250 | Msa0783760:CDS | 25.0% |
| ! | AGTGATTAATGAGTTAGATA+GGG | - | chr5_2:67923232-67923251 | Msa0783760:CDS | 25.0% |
| ! | TATATGATAGAACATTATGG+TGG | - | chr5_2:67923261-67923280 | Msa0783760:CDS | 25.0% |
| ! | AACCTTACAAATCAATAGTA+CGG | + | chr5_2:67923459-67923478 | None:intergenic | 25.0% |
| ! | ACTTCATAACATAATGGTTT+CGG | - | chr5_2:67923503-67923522 | Msa0783760:CDS | 25.0% |
| ! | TAATGGTAAAGATGAAATTG+AGG | - | chr5_2:67923533-67923552 | Msa0783760:CDS | 25.0% |
| ! | ATTGAGGAATGTAACAATAA+TGG | - | chr5_2:67923549-67923568 | Msa0783760:CDS | 25.0% |
| !! | ATATGTATAACTTTTGCGAT+CGG | - | chr5_2:67924278-67924297 | Msa0783760:intron | 25.0% |
| ! | TAAAGATTATGATTCTGGAT+CGG | - | chr5_2:67924346-67924365 | Msa0783760:intron | 25.0% |
| ! | AATTATACCTCTTTCTCATT+TGG | + | chr5_2:67924772-67924791 | None:intergenic | 25.0% |
| CAAAACAGAGAAACAAGAAA+TGG | + | chr5_2:67922487-67922506 | None:intergenic | 30.0% | |
| CTCTCAATATAACTCTTACT+TGG | - | chr5_2:67922507-67922526 | Msa0783760:CDS | 30.0% | |
| ! | TTGAAGGCATATGAAGAAAT+GGG | + | chr5_2:67922586-67922605 | None:intergenic | 30.0% |
| ! | ATTGAAGGCATATGAAGAAA+TGG | + | chr5_2:67922587-67922606 | None:intergenic | 30.0% |
| TGCATAAAATATGCAAGGTT+GGG | + | chr5_2:67922842-67922861 | None:intergenic | 30.0% | |
| ATGCATAAAATATGCAAGGT+TGG | + | chr5_2:67922843-67922862 | None:intergenic | 30.0% | |
| AATATTAGAGAGTGAGAGTT+GGG | - | chr5_2:67923034-67923053 | Msa0783760:CDS | 30.0% | |
| AAATGATAGAAACTTGACCT+AGG | - | chr5_2:67923078-67923097 | Msa0783760:CDS | 30.0% | |
| AGTAAGGAGAATATATCAGA+TGG | - | chr5_2:67923139-67923158 | Msa0783760:CDS | 30.0% | |
| TGGTGTTTAATCGATGTAAT+CGG | - | chr5_2:67923281-67923300 | Msa0783760:CDS | 30.0% | |
| ACCTTACAAATCAATAGTAC+GGG | + | chr5_2:67923458-67923477 | None:intergenic | 30.0% | |
| GCTTAGACTTCATAACATAA+TGG | - | chr5_2:67923497-67923516 | Msa0783760:CDS | 30.0% | |
| !! | ATGGTTTCGGTTGATAATAA+TGG | - | chr5_2:67923516-67923535 | Msa0783760:CDS | 30.0% |
| TCGAGAACTTGAAATATCTA+TGG | + | chr5_2:67923598-67923617 | None:intergenic | 30.0% | |
| ! | TTGAAGAAGTTGATCCTATT+AGG | + | chr5_2:67923681-67923700 | None:intergenic | 30.0% |
| AGGATCAACTTCTTCAAAAT+CGG | - | chr5_2:67923684-67923703 | Msa0783760:CDS | 30.0% | |
| TGAAGAAGATGACAATAGAA+TGG | - | chr5_2:67923841-67923860 | Msa0783760:CDS | 30.0% | |
| ! | AGATGACAATAGAATGGATT+AGG | - | chr5_2:67923847-67923866 | Msa0783760:CDS | 30.0% |
| ACAAGATGGTAGAATAACTT+TGG | + | chr5_2:67924059-67924078 | None:intergenic | 30.0% | |
| ATTATGTGTTTCCATTCATG+AGG | + | chr5_2:67924155-67924174 | None:intergenic | 30.0% | |
| TCATGAATGGAAACACATAA+TGG | - | chr5_2:67924154-67924173 | Msa0783760:intron | 30.0% | |
| !! | ATAATGGTAGTGGTAATTCT+CGG | - | chr5_2:67924170-67924189 | Msa0783760:intron | 30.0% |
| GAATCATAATCTTTACCTAG+AGG | + | chr5_2:67924341-67924360 | None:intergenic | 30.0% | |
| CTAGGTAAAGATTATGATTC+TGG | - | chr5_2:67924341-67924360 | Msa0783760:intron | 30.0% | |
| !! | TTCTGTACTTTTTGTGCATT+TGG | - | chr5_2:67924551-67924570 | Msa0783760:intron | 30.0% |
| ! | CATACAGAAAAGCATAAAAG+TGG | + | chr5_2:67924624-67924643 | None:intergenic | 30.0% |
| ! | CACTTTTATGCTTTTCTGTA+TGG | - | chr5_2:67924622-67924641 | Msa0783760:intron | 30.0% |
| !!! | GGGATTGTTCTATGTTTTTT+CGG | - | chr5_2:67924719-67924738 | Msa0783760:intron | 30.0% |
| ! | AAGTTCTAGCAGTTTCTTTA+TGG | - | chr5_2:67925063-67925082 | Msa0783760:intron | 30.0% |
| ! | TTCAGAAAGCTCTTCTTTTA+CGG | + | chr5_2:67925119-67925138 | None:intergenic | 30.0% |
| !!! | CTCTTGTTTTCTCAGTTCTT+AGG | - | chr5_2:67922545-67922564 | Msa0783760:CDS | 35.0% |
| !!! | TTTTTTTTTTTGGTGGTGGC+CGG | - | chr5_2:67922806-67922825 | Msa0783760:CDS | 35.0% |
| GCATAAAATATGCAAGGTTG+GGG | + | chr5_2:67922841-67922860 | None:intergenic | 35.0% | |
| CAATATTAGAGAGTGAGAGT+TGG | - | chr5_2:67923033-67923052 | Msa0783760:CDS | 35.0% | |
| ATATTAGAGAGTGAGAGTTG+GGG | - | chr5_2:67923035-67923054 | Msa0783760:CDS | 35.0% | |
| !! | ACCCGTACTATTGATTTGTA+AGG | - | chr5_2:67923454-67923473 | Msa0783760:CDS | 35.0% |
| ! | CATTGAGTGCTATTCCTAAT+AGG | - | chr5_2:67923664-67923683 | Msa0783760:CDS | 35.0% |
| TCTCTTAAGCTATGTGAACT+CGG | + | chr5_2:67923777-67923796 | None:intergenic | 35.0% | |
| ! | TGTTTTCAAAGAAACTCGAC+TGG | - | chr5_2:67923811-67923830 | Msa0783760:CDS | 35.0% |
| ! | GTTTTCAAAGAAACTCGACT+GGG | - | chr5_2:67923812-67923831 | Msa0783760:CDS | 35.0% |
| TTCTGTGATTCCAAAGAAGT+CGG | - | chr5_2:67923959-67923978 | Msa0783760:CDS | 35.0% | |
| ! | CGATATCTTTTGGATTCCAT+CGG | + | chr5_2:67924091-67924110 | None:intergenic | 35.0% |
| ! | CTAAGTTTGGCGATATCTTT+TGG | + | chr5_2:67924101-67924120 | None:intergenic | 35.0% |
| AGATATCGCCAAACTTAGAA+AGG | - | chr5_2:67924103-67924122 | Msa0783760:CDS | 35.0% | |
| GAACTTATAAGCCTCATGAA+TGG | - | chr5_2:67924141-67924160 | Msa0783760:CDS | 35.0% | |
| ATGGAAACACATAATGGTAG+TGG | - | chr5_2:67924160-67924179 | Msa0783760:intron | 35.0% | |
| TTTGCTCAATATGCACTTTG+TGG | - | chr5_2:67924206-67924225 | Msa0783760:intron | 35.0% | |
| CACTTTGTGGTCTAAACTTA+GGG | - | chr5_2:67924219-67924238 | Msa0783760:intron | 35.0% | |
| TATACATATTCCAACACCGA+TGG | + | chr5_2:67924267-67924286 | None:intergenic | 35.0% | |
| TATACAATCCTTAGTCCTCT+AGG | - | chr5_2:67924323-67924342 | Msa0783760:intron | 35.0% | |
| AATCTTTACCTAGAGGACTA+AGG | + | chr5_2:67924334-67924353 | None:intergenic | 35.0% | |
| TGAGACTGAAATCATTTGAG+AGG | - | chr5_2:67924417-67924436 | Msa0783760:intron | 35.0% | |
| TGGAGGAATACTTGACATTT+GGG | - | chr5_2:67924499-67924518 | Msa0783760:intron | 35.0% | |
| !! | GTACTTTTTGTGCATTTGGT+TGG | - | chr5_2:67924555-67924574 | Msa0783760:intron | 35.0% |
| TTGTGCATTTGGTTGGAATA+TGG | - | chr5_2:67924562-67924581 | Msa0783760:intron | 35.0% | |
| CAAGATGAAAATCCAAAAGG+GGG | + | chr5_2:67924648-67924667 | None:intergenic | 35.0% | |
| CCAAGATGAAAATCCAAAAG+GGG | + | chr5_2:67924649-67924668 | None:intergenic | 35.0% | |
| GCCAAGATGAAAATCCAAAA+GGG | + | chr5_2:67924650-67924669 | None:intergenic | 35.0% | |
| AGCCAAGATGAAAATCCAAA+AGG | + | chr5_2:67924651-67924670 | None:intergenic | 35.0% | |
| ATATTGAGGATGACACTGTT+AGG | - | chr5_2:67924678-67924697 | Msa0783760:intron | 35.0% | |
| !!! | TGTTTTTTCGGTATGCTCTA+TGG | - | chr5_2:67924731-67924750 | Msa0783760:intron | 35.0% |
| CCTACTTATGACTTCTGTTT+CGG | - | chr5_2:67924794-67924813 | Msa0783760:intron | 35.0% | |
| AAGAAACTGCTAGAACTTAG+AGG | + | chr5_2:67925061-67925080 | None:intergenic | 35.0% | |
| ATGGAATATCATAGTCCAGA+TGG | - | chr5_2:67925082-67925101 | Msa0783760:intron | 35.0% | |
| ! | TCTTCTTTTACGGAAGATAG+TGG | + | chr5_2:67925109-67925128 | None:intergenic | 35.0% |
| !!! | TTTTTTTTTTGGTGGTGGCC+GGG | - | chr5_2:67922807-67922826 | Msa0783760:CDS | 40.0% |
| !! | TGAGCTTAGCTAAGTTGGTT+TGG | + | chr5_2:67922869-67922888 | None:intergenic | 40.0% |
| CAGAGATGAAGATGTTGTGT+TGG | - | chr5_2:67922972-67922991 | Msa0783760:CDS | 40.0% | |
| AAACTTGACCTAGGTGATGT+GGG | - | chr5_2:67923087-67923106 | Msa0783760:CDS | 40.0% | |
| !! | GACGTGTTGATTCTGTAGTA+AGG | - | chr5_2:67923123-67923142 | Msa0783760:CDS | 40.0% |
| CAACCTTTATCTCGCTATGT+GGG | + | chr5_2:67923308-67923327 | None:intergenic | 40.0% | |
| GGTACAGAACAAATACTGCA+AGG | + | chr5_2:67923437-67923456 | None:intergenic | 40.0% | |
| ! | TTCAAGTTCTCGAAGAGCAA+TGG | - | chr5_2:67923605-67923624 | Msa0783760:CDS | 40.0% |
| ATGGTGACAGATGAAAATCC+TGG | - | chr5_2:67923624-67923643 | Msa0783760:CDS | 40.0% | |
| GCATAAGATCCACGCAAAAA+GGG | + | chr5_2:67923889-67923908 | None:intergenic | 40.0% | |
| !! | ATCTTATGCGTTGCTGTTTC+AGG | - | chr5_2:67923900-67923919 | Msa0783760:CDS | 40.0% |
| TCAACATACCAGTCATGACA+AGG | + | chr5_2:67923938-67923957 | None:intergenic | 40.0% | |
| GCAGTACTCCTTTCTAAGTT+TGG | + | chr5_2:67924114-67924133 | None:intergenic | 40.0% | |
| !! | AGAAAGGAGTACTGCAAGAA+TGG | - | chr5_2:67924119-67924138 | Msa0783760:CDS | 40.0% |
| GCACTTTGTGGTCTAAACTT+AGG | - | chr5_2:67924218-67924237 | Msa0783760:intron | 40.0% | |
| GTATATAGACCAGCAATTGC+AGG | + | chr5_2:67924308-67924327 | None:intergenic | 40.0% | |
| CAGTCGAAAATAGACCAAAG+TGG | - | chr5_2:67924474-67924493 | Msa0783760:intron | 40.0% | |
| GAAAATAGACCAAAGTGGAG+TGG | - | chr5_2:67924479-67924498 | Msa0783760:intron | 40.0% | |
| GTGGAGGAATACTTGACATT+TGG | - | chr5_2:67924498-67924517 | Msa0783760:intron | 40.0% | |
| AATATGGAGAGACTTGGCTT+TGG | - | chr5_2:67924578-67924597 | Msa0783760:intron | 40.0% | |
| ! | CCCCTTTTGGATTTTCATCT+TGG | - | chr5_2:67924646-67924665 | Msa0783760:intron | 40.0% |
| CTTGGCTGCTGTTAATATTG+AGG | - | chr5_2:67924664-67924683 | Msa0783760:intron | 40.0% | |
| ACTGTTAGGCAATGTCTAGT+AGG | - | chr5_2:67924692-67924711 | Msa0783760:intron | 40.0% | |
| !! | TTTTTCGGTATGCTCTATGG+TGG | - | chr5_2:67924734-67924753 | Msa0783760:intron | 40.0% |
| ! | GTATGCTCTATGGTGGTTTT+TGG | - | chr5_2:67924741-67924760 | Msa0783760:intron | 40.0% |
| CCGAAACAGAAGTCATAAGT+AGG | + | chr5_2:67924797-67924816 | None:intergenic | 40.0% | |
| CACTTTGGCTATTCTGTTGT+TGG | - | chr5_2:67924840-67924859 | Msa0783760:intron | 40.0% | |
| TCTTGCTCAAGAAATGCGAA+CGG | - | chr5_2:67924868-67924887 | Msa0783760:intron | 40.0% | |
| GTGTGTCATCAACCAAATCT+GGG | - | chr5_2:67924981-67925000 | Msa0783760:intron | 40.0% | |
| CTTGACGGTTTGAAAGTAGA+AGG | + | chr5_2:67925037-67925056 | None:intergenic | 40.0% | |
| CTAGAACTTAGAGGACTTGA+CGG | + | chr5_2:67925052-67925071 | None:intergenic | 40.0% | |
| GGAGATTCTCTTTGTATCAC+CGG | + | chr5_2:67925178-67925197 | None:intergenic | 40.0% | |
| AAGGTTGGGGTTCAAAATCC+CGG | + | chr5_2:67922828-67922847 | None:intergenic | 45.0% | |
| GAAACTTGACCTAGGTGATG+TGG | - | chr5_2:67923086-67923105 | Msa0783760:CDS | 45.0% | |
| GAGAGTAGACGAATCACTAG+AGG | - | chr5_2:67923161-67923180 | Msa0783760:CDS | 45.0% | |
| CCAACCTTTATCTCGCTATG+TGG | + | chr5_2:67923309-67923328 | None:intergenic | 45.0% | |
| CCACATAGCGAGATAAAGGT+TGG | - | chr5_2:67923306-67923325 | Msa0783760:CDS | 45.0% | |
| GAATAGCACTCAATGTGCTC+GGG | + | chr5_2:67923659-67923678 | None:intergenic | 45.0% | |
| GGAATAGCACTCAATGTGCT+CGG | + | chr5_2:67923660-67923679 | None:intergenic | 45.0% | |
| AGTGGCAAGACGCTTGAATT+TGG | + | chr5_2:67923721-67923740 | None:intergenic | 45.0% | |
| AAGCTATGTGAACTCGGAGA+AGG | + | chr5_2:67923771-67923790 | None:intergenic | 45.0% | |
| GATTAGGAACCCGATGAACA+TGG | - | chr5_2:67923863-67923882 | Msa0783760:CDS | 45.0% | |
| CAAAAAGGGCCATGTTCATC+GGG | + | chr5_2:67923875-67923894 | None:intergenic | 45.0% | |
| GCAAAAAGGGCCATGTTCAT+CGG | + | chr5_2:67923876-67923895 | None:intergenic | 45.0% | |
| CGCATAAGATCCACGCAAAA+AGG | + | chr5_2:67923890-67923909 | None:intergenic | 45.0% | |
| !! | TTATGCGTTGCTGTTTCAGG+TGG | - | chr5_2:67923903-67923922 | Msa0783760:CDS | 45.0% |
| ATCCTGTTCCTTGTCATGAC+TGG | - | chr5_2:67923927-67923946 | Msa0783760:CDS | 45.0% | |
| TACCAGTCATGACAAGGAAC+AGG | + | chr5_2:67923932-67923951 | None:intergenic | 45.0% | |
| TGATTCCAAAGAAGTCGGCA+AGG | - | chr5_2:67923964-67923983 | Msa0783760:CDS | 45.0% | |
| ! | ATCGGCACAGAAGTACAAGA+TGG | + | chr5_2:67924073-67924092 | None:intergenic | 45.0% |
| ATCTTGTACTTCTGTGCCGA+TGG | - | chr5_2:67924072-67924091 | Msa0783760:CDS | 45.0% | |
| GTATAAAAGATCTGAGCGCC+CGG | - | chr5_2:67924241-67924260 | Msa0783760:intron | 45.0% | |
| AATAGACCAAAGTGGAGTGG+AGG | - | chr5_2:67924482-67924501 | Msa0783760:intron | 45.0% | |
| AGTATTCCTCCACTCCACTT+TGG | + | chr5_2:67924491-67924510 | None:intergenic | 45.0% | |
| GGTTGGAATATGGAGAGACT+TGG | - | chr5_2:67924572-67924591 | Msa0783760:intron | 45.0% | |
| ! | TTTTCTGTATGGCCCCCTTT+TGG | - | chr5_2:67924633-67924652 | Msa0783760:intron | 45.0% |
| !! | TGCTCTATGGTGGTTTTTGG+AGG | - | chr5_2:67924744-67924763 | Msa0783760:intron | 45.0% |
| GGAGGATCCAAATGAGAAAG+AGG | - | chr5_2:67924762-67924781 | Msa0783760:intron | 45.0% | |
| CTTGCTCAAGAAATGCGAAC+GGG | - | chr5_2:67924869-67924888 | Msa0783760:intron | 45.0% | |
| TTGCTCAAGAAATGCGAACG+GGG | - | chr5_2:67924870-67924889 | Msa0783760:intron | 45.0% | |
| GGTGTGTCATCAACCAAATC+TGG | - | chr5_2:67924980-67924999 | Msa0783760:intron | 45.0% | |
| AGGAGAACTTGTCCCAGATT+TGG | + | chr5_2:67924996-67925015 | None:intergenic | 45.0% | |
| GATTCTCTTTGTATCACCGG+CGG | + | chr5_2:67925175-67925194 | None:intergenic | 45.0% | |
| GCTCGTGAGCTTAGCTAAGT+TGG | + | chr5_2:67922874-67922893 | None:intergenic | 50.0% | |
| TCTACATGCCCACATCACCT+AGG | + | chr5_2:67923098-67923117 | None:intergenic | 50.0% | |
| AGACGAATCACTAGAGGCAG+AGG | - | chr5_2:67923167-67923186 | Msa0783760:CDS | 50.0% | |
| GGTCCCACATAGCGAGATAA+AGG | - | chr5_2:67923302-67923321 | Msa0783760:CDS | 50.0% | |
| AAGGCACAGATTGTGAAGCC+TGG | + | chr5_2:67923752-67923771 | None:intergenic | 50.0% | |
| ! | TGAACATGGCCCTTTTTGCG+TGG | - | chr5_2:67923877-67923896 | Msa0783760:CDS | 50.0% |
| !! | GCATTCCTTGCCGACTTCTT+TGG | + | chr5_2:67923972-67923991 | None:intergenic | 50.0% |
| AGAAGTCGGCAAGGAATGCA+TGG | - | chr5_2:67923973-67923992 | Msa0783760:CDS | 50.0% | |
| ATATTCCAACACCGATGGCC+GGG | + | chr5_2:67924262-67924281 | None:intergenic | 50.0% | |
| CATATTCCAACACCGATGGC+CGG | + | chr5_2:67924263-67924282 | None:intergenic | 50.0% | |
| TGGATCGGACGAAGAATCAC+AGG | - | chr5_2:67924361-67924380 | Msa0783760:intron | 50.0% | |
| AGGCAATGTCTAGTAGGTGC+TGG | - | chr5_2:67924698-67924717 | Msa0783760:intron | 50.0% | |
| GGCAATGTCTAGTAGGTGCT+GGG | - | chr5_2:67924699-67924718 | Msa0783760:intron | 50.0% | |
| TGCTCAAGAAATGCGAACGG+GGG | - | chr5_2:67924871-67924890 | Msa0783760:intron | 50.0% | |
| ! | TCTGGGACAAGTTCTCCTCT+TGG | - | chr5_2:67924998-67925017 | Msa0783760:intron | 50.0% |
| !! | ACGGAAGATAGTGGACCATC+TGG | + | chr5_2:67925100-67925119 | None:intergenic | 50.0% |
| AATGATTCCACCAACTCCGC+CGG | - | chr5_2:67925156-67925175 | Msa0783760:intron | 50.0% | |
| GTGCTCGGGAACTTTCTACC+AGG | + | chr5_2:67923645-67923664 | None:intergenic | 55.0% | |
| CAAGCGTCTTGCCACTCAGA+TGG | - | chr5_2:67923725-67923744 | Msa0783760:CDS | 55.0% | |
| TCTTGCCACTCAGATGGACC+AGG | - | chr5_2:67923731-67923750 | Msa0783760:CDS | 55.0% | |
| TGAAGCCTGGTCCATCTGAG+TGG | + | chr5_2:67923739-67923758 | None:intergenic | 55.0% | |
| ATCGGTGCACCTGCAATTGC+TGG | - | chr5_2:67924296-67924315 | Msa0783760:intron | 55.0% | |
| CTTCTGTTTCGGCAAGCCTG+CGG | - | chr5_2:67924805-67924824 | Msa0783760:intron | 55.0% | |
| TTTCGGCAAGCCTGCGGTTT+CGG | - | chr5_2:67924811-67924830 | Msa0783760:intron | 55.0% | |
| CGGTTTCGGACTGCACACTT+TGG | - | chr5_2:67924825-67924844 | Msa0783760:intron | 55.0% | |
| TCGCGACGCAGAGGTGAAAT+CGG | + | chr5_2:67924959-67924978 | None:intergenic | 55.0% | |
| ATTTCACCTCTGCGTCGCGA+AGG | - | chr5_2:67924959-67924978 | Msa0783760:intron | 55.0% | |
| ! | GGAGACGAGTTGACACCAAG+AGG | + | chr5_2:67925016-67925035 | None:intergenic | 55.0% |
| CTTTGTATCACCGGCGGAGT+TGG | + | chr5_2:67925169-67925188 | None:intergenic | 55.0% | |
| AGTGTGCAGTCCGAAACCGC+AGG | + | chr5_2:67924824-67924843 | None:intergenic | 60.0% | |
| GCAGAGGTGAAATCGGCGGT+TGG | + | chr5_2:67924952-67924971 | None:intergenic | 60.0% | |
| CGACGCAGAGGTGAAATCGG+CGG | + | chr5_2:67924956-67924975 | None:intergenic | 60.0% | |
| TGTATCACCGGCGGAGTTGG+TGG | + | chr5_2:67925166-67925185 | None:intergenic | 60.0% | |
| AGATCTGAGCGCCCGGCCAT+CGG | - | chr5_2:67924248-67924267 | Msa0783760:intron | 65.0% | |
| GACACACCTTCGCGACGCAG+AGG | + | chr5_2:67924968-67924987 | None:intergenic | 65.0% | |
| GAGCGCCCGGCCATCGGTGT+TGG | - | chr5_2:67924254-67924273 | Msa0783760:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 67922459 | 67925201 | 67922459 | ID=Msa0783760;Name=Msa0783760 |
| chr5_2 | mRNA | 67922459 | 67925201 | 67922459 | ID=Msa0783760-mRNA-1;Parent=Msa0783760;Name=Msa0783760-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0|0|1|0|0|3|0|573 |
| chr5_2 | exon | 67925195 | 67925201 | 67925195 | ID=Msa0783760-mRNA-1:exon:20384;Parent=Msa0783760-mRNA-1 |
| chr5_2 | exon | 67925094 | 67925100 | 67925094 | ID=Msa0783760-mRNA-1:exon:20383;Parent=Msa0783760-mRNA-1 |
| chr5_2 | exon | 67922459 | 67924166 | 67922459 | ID=Msa0783760-mRNA-1:exon:20382;Parent=Msa0783760-mRNA-1 |
| chr5_2 | CDS | 67925195 | 67925201 | 67925195 | ID=Msa0783760-mRNA-1:cds;Parent=Msa0783760-mRNA-1 |
| chr5_2 | CDS | 67925094 | 67925100 | 67925094 | ID=Msa0783760-mRNA-1:cds;Parent=Msa0783760-mRNA-1 |
| chr5_2 | CDS | 67922459 | 67924166 | 67922459 | ID=Msa0783760-mRNA-1:cds;Parent=Msa0783760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
