Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702500 | XP_003629947.1 | 93.243 | 444 | 2 | 1 | 1 | 416 | 1 | 444 | 0.0 | 841 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702500 | sp|Q96254|GDI1_ARATH | 81.081 | 444 | 56 | 1 | 1 | 416 | 1 | 444 | 0.0 | 739 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702500 | G7L8T3 | 93.243 | 444 | 2 | 1 | 1 | 416 | 1 | 444 | 0.0 | 841 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0043990 | Msa0702500 | 0.803277 | 3.764933e-49 | -8.615850e-47 |
| Msa0052180 | Msa0702500 | -0.800491 | 1.405593e-48 | -8.615850e-47 |
| Msa0061130 | Msa0702500 | -0.800112 | 1.679417e-48 | -8.615850e-47 |
| Msa0086370 | Msa0702500 | 0.815206 | 1.040940e-51 | -8.615850e-47 |
| Msa0097220 | Msa0702500 | -0.833601 | 4.857152e-56 | -8.615850e-47 |
| Msa0702500 | Msa0713570 | -0.800628 | 1.318278e-48 | -8.615850e-47 |
| Msa0702500 | Msa0755550 | -0.804455 | 2.142140e-49 | -8.615850e-47 |
| Msa0702500 | Msa0813610 | 0.822055 | 2.907222e-53 | -8.615850e-47 |
| Msa0702500 | Msa0817880 | -0.808633 | 2.813913e-50 | -8.615850e-47 |
| Msa0702500 | Msa0835050 | -0.803984 | 2.684769e-49 | -8.615850e-47 |
| Msa0702500 | Msa0854230 | 0.837520 | 4.951972e-57 | -8.615850e-47 |
| Msa0702500 | Msa1034690 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0702500 | Msa1058550 | -0.814236 | 1.707136e-51 | -8.615850e-47 |
| Msa0702500 | Msa1082640 | -0.827102 | 1.883273e-54 | -8.615850e-47 |
| Msa0702500 | Msa1111910 | 0.805132 | 1.547333e-49 | -8.615850e-47 |
| Msa0702500 | Msa1156100 | -0.804521 | 2.075761e-49 | -8.615850e-47 |
| Msa0702500 | Msa1269730 | -0.800747 | 1.246367e-48 | -8.615850e-47 |
| Msa0702500 | Msa1437590 | 0.806802 | 6.893317e-50 | -8.615850e-47 |
| Msa0702500 | Msa1439000 | -0.805045 | 1.613614e-49 | -8.615850e-47 |
| Msa0702500 | Msa1447140 | 0.809375 | 1.952094e-50 | -8.615850e-47 |
| Msa0702500 | Msa1463640 | 0.844128 | 9.155859e-59 | -8.615850e-47 |
| Msa0122930 | Msa0702500 | -0.804175 | 2.451013e-49 | -8.615850e-47 |
| Msa0136090 | Msa0702500 | 0.806795 | 6.916334e-50 | -8.615850e-47 |
| Msa0185540 | Msa0702500 | -0.810944 | 8.961036e-51 | -8.615850e-47 |
| Msa0230920 | Msa0702500 | 0.805330 | 1.406273e-49 | -8.615850e-47 |
| Msa0476140 | Msa0702500 | -0.816376 | 5.709570e-52 | -8.615850e-47 |
| Msa0336460 | Msa0702500 | 0.801041 | 1.085727e-48 | -8.615850e-47 |
| Msa0336520 | Msa0702500 | 0.801726 | 7.860714e-49 | -8.615850e-47 |
| Msa0524710 | Msa0702500 | 0.806201 | 9.229135e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702500 | MtrunA17_Chr8g0380591 | 93.243 | 444 | 2 | 1 | 1 | 416 | 1 | 444 | 0.0 | 841 |
| Msa0702500 | MtrunA17_Chr4g0049891 | 76.835 | 436 | 73 | 1 | 1 | 408 | 1 | 436 | 0.0 | 693 |
| Msa0702500 | MtrunA17_Chr5g0406991 | 27.575 | 301 | 182 | 10 | 59 | 328 | 140 | 435 | 4.22e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0702500 | AT2G44100.1 | 81.081 | 444 | 56 | 1 | 1 | 416 | 1 | 444 | 0.0 | 739 |
| Msa0702500 | AT3G59920.1 | 80.856 | 444 | 57 | 1 | 1 | 416 | 1 | 444 | 0.0 | 736 |
| Msa0702500 | AT2G44100.2 | 80.930 | 430 | 54 | 1 | 1 | 402 | 1 | 430 | 0.0 | 717 |
| Msa0702500 | AT5G09550.1 | 75.676 | 444 | 80 | 1 | 1 | 416 | 1 | 444 | 0.0 | 699 |
| Msa0702500 | AT3G06540.1 | 24.688 | 320 | 198 | 12 | 59 | 338 | 137 | 453 | 1.51e-16 | 82.0 |
Find 126 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGACACGACAACTATTTA+TGG | 0.160220 | 4_4:+74143143 | Msa0702500:three_prime_UTR |
| TAGCTTTATTTGTTTAATTT+TGG | 0.161390 | 4_4:+74143046 | Msa0702500:three_prime_UTR |
| TTGACCCATGACAGAAAATT+TGG | 0.184972 | 4_4:+74137476 | Msa0702500:intron |
| CACTTCCCTTAATCTTATTC+AGG | 0.214984 | 4_4:+74136071 | Msa0702500:CDS |
| GATGATCAAGGAAAGGTTAT+TGG | 0.226106 | 4_4:+74139162 | Msa0702500:CDS |
| GGCTTTGAAGTCCCCACTTA+TGG | 0.233527 | 4_4:+74136861 | Msa0702500:CDS |
| TTTGGGTGTTTAGTTCATTA+TGG | 0.255862 | 4_4:+74136595 | Msa0702500:intron |
| GCACGGCTTAGCGCTGTTTA+TGG | 0.259796 | 4_4:+74137943 | Msa0702500:CDS |
| CGATCTTGATTTGATTTGAT+TGG | 0.276344 | 4_4:-74135787 | None:intergenic |
| AGTATATCTACCTTGCATTC+AGG | 0.307677 | 4_4:-74137988 | None:intergenic |
| AACATGTATACGTTGATAAC+TGG | 0.312028 | 4_4:+74142154 | Msa0702500:CDS |
| CCAGGTTTCAGTTCAATTGC+AGG | 0.316392 | 4_4:-74141906 | None:intergenic |
| AGAATACGATGTAATCGTTC+TGG | 0.319703 | 4_4:+74135861 | Msa0702500:CDS |
| ATATATCCTTTGTATGGTTT+AGG | 0.331062 | 4_4:+74137783 | Msa0702500:CDS |
| AAACCTGGAATTGACCTTCT+AGG | 0.335092 | 4_4:+74141921 | Msa0702500:CDS |
| TCGTTGTAAAGTGCAAAGTA+TGG | 0.345660 | 4_4:-74142849 | None:intergenic |
| GATTGGGAGTCGTTGGTGTT+GGG | 0.351697 | 4_4:-74139568 | None:intergenic |
| TGTAGAACAGATTTGTTTGC+AGG | 0.358078 | 4_4:+74142939 | Msa0702500:three_prime_UTR |
| GGACTTCATTGGTCATGCTT+TGG | 0.364793 | 4_4:+74137517 | Msa0702500:CDS |
| TCTAGGGTGGGTTCATTGAC+TGG | 0.390022 | 4_4:-74141987 | None:intergenic |
| CGATTGGGAGTCGTTGGTGT+TGG | 0.396158 | 4_4:-74139569 | None:intergenic |
| TATTCTCCCACAAAAGCAAC+TGG | 0.403427 | 4_4:+74139600 | Msa0702500:CDS |
| GCTTTGAAGTCCCCACTTAT+GGG | 0.406357 | 4_4:+74136862 | Msa0702500:CDS |
| GAGTCTCTTGCACGATTTCA+AGG | 0.410458 | 4_4:+74137747 | Msa0702500:CDS |
| ATTACGCACAAGCGAGCATC+TGG | 0.410887 | 4_4:-74142977 | None:intergenic |
| CCTTACATATATCCTTTGTA+TGG | 0.411629 | 4_4:+74137777 | Msa0702500:CDS |
| TCTTTACTCTTCTGCAGCAC+TGG | 0.413041 | 4_4:-74142780 | None:intergenic |
| ACATTTAACAAACGAGCAAT+TGG | 0.419428 | 4_4:-74143100 | None:intergenic |
| TGACTTACATGTCTGACTTT+CGG | 0.427909 | 4_4:-74139624 | None:intergenic |
| CTGCGATCTCCGATCGAAGA+TGG | 0.428438 | 4_4:+74135834 | Msa0702500:exon |
| ACCTTGTTGGTCAAGTATGA+TGG | 0.428877 | 4_4:-74139234 | None:intergenic |
| GAGTCGTTGGTGTTGGGGAT+CGG | 0.429569 | 4_4:-74139562 | None:intergenic |
| GGTCCTAGAAGGTCAATTCC+AGG | 0.437493 | 4_4:-74141924 | None:intergenic |
| CTGAATAAGATTAAGGGAAG+TGG | 0.439368 | 4_4:-74136070 | None:intergenic |
| AAAGCCTCCATGTCATTTGA+AGG | 0.440668 | 4_4:-74136844 | None:intergenic |
| TCTCACAATGTTTGCCCAAA+GGG | 0.442192 | 4_4:+74141840 | Msa0702500:CDS |
| GTCTTGCTAACTTGTGCTCC+TGG | 0.444079 | 4_4:+74143193 | Msa0702500:three_prime_UTR |
| TCGAAATAAAGCAGTTGTCT+AGG | 0.450436 | 4_4:-74142004 | None:intergenic |
| CCTGCAATTGAACTGAAACC+TGG | 0.453263 | 4_4:+74141906 | Msa0702500:CDS |
| CTCTTCACAGTGTCTAGTGC+TGG | 0.455178 | 4_4:-74137572 | None:intergenic |
| AAGACACGACAACTATTTAT+GGG | 0.459161 | 4_4:+74143144 | Msa0702500:three_prime_UTR |
| GATAACACTGTGGACTTCAT+TGG | 0.464458 | 4_4:+74137506 | Msa0702500:CDS |
| GAGAATAACTTGCACCGATT+GGG | 0.465079 | 4_4:-74139584 | None:intergenic |
| GATGTAATCGTTCTGGGAAC+TGG | 0.470059 | 4_4:+74135868 | Msa0702500:CDS |
| TTCAGACTGCTTCTTCTACT+CGG | 0.478139 | 4_4:-74135723 | None:intergenic |
| ATGGATAGAAATGATTATTA+CGG | 0.478912 | 4_4:+74136039 | Msa0702500:CDS |
| TCTCATCAACAGGTCCTAGA+AGG | 0.482856 | 4_4:-74141935 | None:intergenic |
| TTTCAAATATTCCCATAAGT+GGG | 0.483406 | 4_4:-74136873 | None:intergenic |
| GGAGAATAACTTGCACCGAT+TGG | 0.484322 | 4_4:-74139585 | None:intergenic |
| ATCGGAGATCGCAGTCGAAA+GGG | 0.491725 | 4_4:-74135825 | None:intergenic |
| GAATACGATGTAATCGTTCT+GGG | 0.496229 | 4_4:+74135862 | Msa0702500:CDS |
| CGAAATAAAGCAGTTGTCTA+GGG | 0.502383 | 4_4:-74142003 | None:intergenic |
| CTCTATTTCAAAGCTGTGGA+TGG | 0.502434 | 4_4:+74136668 | Msa0702500:CDS |
| TCACTTTGAATCAACAGTAC+TGG | 0.502679 | 4_4:+74142123 | Msa0702500:CDS |
| GTTATTGGCGTCACGTCTGA+AGG | 0.507245 | 4_4:+74139177 | Msa0702500:CDS |
| GTTTAGTTCATTATGGCCAA+TGG | 0.508001 | 4_4:+74136602 | Msa0702500:intron |
| CAGGTGGAATTTGATGATCA+AGG | 0.509665 | 4_4:+74139150 | Msa0702500:intron |
| CCATACAAAGGATATATGTA+AGG | 0.512388 | 4_4:-74137777 | None:intergenic |
| ATTGGGAGTCGTTGGTGTTG+GGG | 0.515858 | 4_4:-74139567 | None:intergenic |
| AGTGGTCTTCTCTCCGTCGA+TGG | 0.517094 | 4_4:+74135910 | Msa0702500:CDS |
| AACCCTCACTAATGTGCCAT+TGG | 0.520084 | 4_4:-74136618 | None:intergenic |
| CGTTGGTGTTGGGGATCGGA+TGG | 0.525316 | 4_4:-74139558 | None:intergenic |
| ACCATTTCAACAGGTGAGGA+AGG | 0.530785 | 4_4:+74139501 | Msa0702500:intron |
| TTTCAACAGGTGAGGAAGGT+TGG | 0.530894 | 4_4:+74139505 | Msa0702500:intron |
| GATCGGAGATCGCAGTCGAA+AGG | 0.536746 | 4_4:-74135826 | None:intergenic |
| GCTGATCCTAAAACTCATGA+TGG | 0.539416 | 4_4:+74136943 | Msa0702500:CDS |
| TCCTAAAACTCATGATGGGA+TGG | 0.544577 | 4_4:+74136948 | Msa0702500:CDS |
| ACAGGTGAGGAAGGTTGGTA+AGG | 0.545562 | 4_4:+74139510 | Msa0702500:intron |
| TTCTCACAATGTTTGCCCAA+AGG | 0.554054 | 4_4:+74141839 | Msa0702500:CDS |
| TTGCACCGATTGGGAGTCGT+TGG | 0.554833 | 4_4:-74139575 | None:intergenic |
| TGGTTTAGGAGAGCTTCCTC+AGG | 0.555597 | 4_4:+74137797 | Msa0702500:CDS |
| GTTGAATAAACCTGAATGCA+AGG | 0.558302 | 4_4:+74137978 | Msa0702500:CDS |
| GAGAATACGAGCAACAGAAT+AGG | 0.558919 | 4_4:-74141821 | None:intergenic |
| TATTGGTACAGGCATTTGCA+CGG | 0.559199 | 4_4:+74137926 | Msa0702500:intron |
| CAAGGTACCTTCAAATGACA+TGG | 0.560179 | 4_4:+74136837 | Msa0702500:CDS |
| GGAAGGTTGGTAAGGTTGCA+AGG | 0.561162 | 4_4:+74139518 | Msa0702500:CDS |
| AGTCTCTTGCACGATTTCAA+GGG | 0.561340 | 4_4:+74137748 | Msa0702500:CDS |
| CGGCTTAGCGCTGTTTATGG+AGG | 0.561599 | 4_4:+74137946 | Msa0702500:CDS |
| AATTGCTTAAAGAGTGCACC+AGG | 0.561913 | 4_4:-74143211 | None:intergenic |
| CAACACCAACGACTCCCAAT+CGG | 0.563999 | 4_4:+74139570 | Msa0702500:CDS |
| GGAATTTGATGATCAAGGAA+AGG | 0.566365 | 4_4:+74139155 | Msa0702500:CDS |
| TTCAAATATTCCCATAAGTG+GGG | 0.568438 | 4_4:-74136872 | None:intergenic |
| TTATGTTCAAGATTATAATG+AGG | 0.568766 | 4_4:+74136921 | Msa0702500:CDS |
| CTTGACAAGAGTCACTACTA+AGG | 0.569477 | 4_4:+74136972 | Msa0702500:CDS |
| CTTTGTCTTTAACAAAGCAA+AGG | 0.569984 | 4_4:+74136694 | Msa0702500:CDS |
| TGGCCAATGGCACATTAGTG+AGG | 0.571838 | 4_4:+74136615 | Msa0702500:CDS |
| AATAAAGCAGTTGTCTAGGG+TGG | 0.573026 | 4_4:-74142000 | None:intergenic |
| GTATCTCTATTTCAAAGCTG+TGG | 0.574401 | 4_4:+74136664 | Msa0702500:CDS |
| GTCTCTTGCACGATTTCAAG+GGG | 0.577654 | 4_4:+74137749 | Msa0702500:CDS |
| GTAGAACAGATTTGTTTGCA+GGG | 0.578944 | 4_4:+74142940 | Msa0702500:three_prime_UTR |
| ACGCACAAGCGAGCATCTGG+AGG | 0.583998 | 4_4:-74142974 | None:intergenic |
| AGTCCACAGTGTTATCATCA+AGG | 0.587304 | 4_4:-74137499 | None:intergenic |
| CGCACAAGCGAGCATCTGGA+GGG | 0.587744 | 4_4:-74142973 | None:intergenic |
| GGCCAATGGCACATTAGTGA+GGG | 0.588085 | 4_4:+74136616 | Msa0702500:CDS |
| GGTTACTTTGAGGCCATCGA+CGG | 0.588114 | 4_4:-74135923 | None:intergenic |
| CTGATCCTAAAACTCATGAT+GGG | 0.593086 | 4_4:+74136944 | Msa0702500:CDS |
| GAGTAGAAGAAGCAGTCTGA+AGG | 0.594056 | 4_4:+74135725 | Msa0702500:five_prime_UTR |
| TGTCTGTTATGTGTTGCCGA+TGG | 0.594973 | 4_4:+74142823 | Msa0702500:three_prime_UTR |
| TACTGTTGATTCAAAGTGAG+TGG | 0.602582 | 4_4:-74142119 | None:intergenic |
| GAAGGTTGGTAAGGTTGCAA+GGG | 0.604709 | 4_4:+74139519 | Msa0702500:CDS |
| ATAAAGCAGTTGTCTAGGGT+GGG | 0.607677 | 4_4:-74141999 | None:intergenic |
| TTATTGGCGTCACGTCTGAA+GGG | 0.608673 | 4_4:+74139178 | Msa0702500:CDS |
| GGGGATCGGATGGCTCATGA+TGG | 0.613814 | 4_4:-74139548 | None:intergenic |
| ATTCTTCATCCATCTTCGAT+CGG | 0.620407 | 4_4:-74135843 | None:intergenic |
| GTATACGTTGATAACTGGAA+AGG | 0.621367 | 4_4:+74142159 | Msa0702500:CDS |
| GATAGAAATGATTATTACGG+AGG | 0.624916 | 4_4:+74136042 | Msa0702500:CDS |
| TCGGAGATCGCAGTCGAAAG+GGG | 0.628674 | 4_4:-74135824 | None:intergenic |
| TTATCAACGTATACATGTTG+AGG | 0.629009 | 4_4:-74142150 | None:intergenic |
| TATTGGCGTCACGTCTGAAG+GGG | 0.631609 | 4_4:+74139179 | Msa0702500:CDS |
| CGGAGATCGCAGTCGAAAGG+GGG | 0.635039 | 4_4:-74135823 | None:intergenic |
| TTACTCTTCTGCAGCACTGG+CGG | 0.636142 | 4_4:-74142777 | None:intergenic |
| GTGCAAAGTATGGATTCCAT+CGG | 0.639245 | 4_4:-74142839 | None:intergenic |
| TTTGTAATAGACTGTTGTTG+AGG | 0.641267 | 4_4:+74135757 | Msa0702500:five_prime_UTR |
| AGACACTGTGAAGAGAATGA+AGG | 0.644888 | 4_4:+74137580 | Msa0702500:CDS |
| GCACAAGCGAGCATCTGGAG+GGG | 0.644983 | 4_4:-74142972 | None:intergenic |
| TATTGCATTTGTATCAACTG+AGG | 0.650673 | 4_4:+74141869 | Msa0702500:CDS |
| AGCTCTCCTAAACCATACAA+AGG | 0.658728 | 4_4:-74137789 | None:intergenic |
| ATTCTCCCACAAAAGCAACT+GGG | 0.662559 | 4_4:+74139601 | Msa0702500:CDS |
| GCAACACATAACAGACACAA+AGG | 0.678923 | 4_4:-74142817 | None:intergenic |
| TCCATCATACTTGACCAACA+AGG | 0.680703 | 4_4:+74139233 | Msa0702500:CDS |
| CTCAAAGAATGCATTCTCAG+TGG | 0.682881 | 4_4:+74135892 | Msa0702500:CDS |
| GGTACCTTCAAATGACATGG+AGG | 0.738325 | 4_4:+74136840 | Msa0702500:CDS |
| CGGCACTGAGATCCACAGTG+AGG | 0.743753 | 4_4:-74142757 | None:intergenic |
| TCTCTTGCACGATTTCAAGG+GGG | 0.764721 | 4_4:+74137750 | Msa0702500:CDS |
| TGGCCTTGATGATAACACTG+TGG | 0.769317 | 4_4:+74137496 | Msa0702500:CDS |
| ACAGGTTCTAGACCTCACTG+TGG | 0.826301 | 4_4:+74142745 | Msa0702500:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAAAAATAAATATT+AGG | - | chr4_4:74136574-74136593 | None:intergenic | 0.0% |
| !!! | ATTTATTTTTTTAATTTTTT+TGG | + | chr4_4:74136577-74136596 | Msa0702500:intron | 0.0% |
| !!! | TTTATTTTTTTAATTTTTTT+GGG | + | chr4_4:74136578-74136597 | Msa0702500:intron | 0.0% |
| !!! | TTTTTATTATTTTTTTGCTT+AGG | + | chr4_4:74136008-74136027 | Msa0702500:intron | 10.0% |
| !!! | TTTCTTGTTTTTAATTATTT+CGG | + | chr4_4:74136293-74136312 | Msa0702500:intron | 10.0% |
| !! | AAAAAAAAAATTGAAATTAG+TGG | + | chr4_4:74139403-74139422 | Msa0702500:intron | 10.0% |
| !! | AATTAATTAAAGCATAATTT+AGG | - | chr4_4:74139915-74139934 | None:intergenic | 10.0% |
| !!! | CTAAATAATATTTTTAAACT+AGG | - | chr4_4:74140441-74140460 | None:intergenic | 10.0% |
| !! | AAAATAAATGAATAACCTTA+GGG | - | chr4_4:74136268-74136287 | None:intergenic | 15.0% |
| !! | ATAATTAAAAACAAGAAAAG+CGG | - | chr4_4:74136291-74136310 | None:intergenic | 15.0% |
| !! | ATCTATAAATGGAAATATAA+TGG | - | chr4_4:74137047-74137066 | None:intergenic | 15.0% |
| !!! | TAATTTATTTTTTTTACGCT+GGG | - | chr4_4:74138705-74138724 | None:intergenic | 15.0% |
| !!! | TTAATTTATTTTTTTTACGC+TGG | - | chr4_4:74138706-74138725 | None:intergenic | 15.0% |
| !! | ACAATAATAACTATAAAGTA+AGG | - | chr4_4:74139055-74139074 | None:intergenic | 15.0% |
| !!! | AAGTTAACAATTTTTCTTAA+AGG | + | chr4_4:74140051-74140070 | Msa0702500:intron | 15.0% |
| !!! | AGTTAACAATTTTTCTTAAA+GGG | + | chr4_4:74140052-74140071 | Msa0702500:intron | 15.0% |
| !!! | AATAAATTATCTTTGCATTT+TGG | - | chr4_4:74141693-74141712 | None:intergenic | 15.0% |
| !! | AAAAATAAAACAATGTAACA+AGG | - | chr4_4:74141784-74141803 | None:intergenic | 15.0% |
| !!! | TTGTTTTATTTTTTTTGTCA+TGG | + | chr4_4:74141791-74141810 | Msa0702500:intron | 15.0% |
| !!! | TGTTTTATTTTTTTTGTCAT+GGG | + | chr4_4:74141792-74141811 | Msa0702500:intron | 15.0% |
| !!! | ACATTTTAATAAAAGTGTAT+CGG | - | chr4_4:74142475-74142494 | None:intergenic | 15.0% |
| !!! | TTTACTGTTAATTTCATTTT+GGG | - | chr4_4:74142586-74142605 | None:intergenic | 15.0% |
| !!! | TTATATAAGTTGTTTTGTTT+TGG | + | chr4_4:74142896-74142915 | Msa0702500:three_prime_UTR | 15.0% |
| !!! | TAGCTTTATTTGTTTAATTT+TGG | + | chr4_4:74143046-74143065 | Msa0702500:three_prime_UTR | 15.0% |
| !! | AAAATCAAACATGATTTGAT+TGG | - | chr4_4:74135991-74136010 | None:intergenic | 20.0% |
| !! | ATGGATAGAAATGATTATTA+CGG | + | chr4_4:74136039-74136058 | Msa0702500:CDS | 20.0% |
| !!! | TTTTACCTGAATAAGATTAA+GGG | - | chr4_4:74136079-74136098 | None:intergenic | 20.0% |
| !!! | TTTTTACCTGAATAAGATTA+AGG | - | chr4_4:74136080-74136099 | None:intergenic | 20.0% |
| !! | GAAAATAAATGAATAACCTT+AGG | - | chr4_4:74136269-74136288 | None:intergenic | 20.0% |
| !! | TTCAGTTTAAAAATCAAGTT+AGG | + | chr4_4:74136416-74136435 | Msa0702500:intron | 20.0% |
| !! | TTATGTTCAAGATTATAATG+AGG | + | chr4_4:74136921-74136940 | Msa0702500:CDS | 20.0% |
| !! | TATAAATGGAAATATAATGG+AGG | - | chr4_4:74137044-74137063 | None:intergenic | 20.0% |
| !! | CATTGAATTGAATCTATAAA+TGG | - | chr4_4:74137058-74137077 | None:intergenic | 20.0% |
| !! | TTAAAGAAGATACCATATTA+AGG | - | chr4_4:74137158-74137177 | None:intergenic | 20.0% |
| !! | ATATTACCATATGTATTTGT+AGG | + | chr4_4:74137363-74137382 | Msa0702500:intron | 20.0% |
| !! | TATTACCATATGTATTTGTA+GGG | + | chr4_4:74137364-74137383 | Msa0702500:intron | 20.0% |
| !!! | TTGTTATTCTTTCTGAATTA+TGG | + | chr4_4:74137627-74137646 | Msa0702500:intron | 20.0% |
| !! | TGTTATTCTTTCTGAATTAT+GGG | + | chr4_4:74137628-74137647 | Msa0702500:intron | 20.0% |
| !! | TAACTATAAGTAGGAAATAT+AGG | - | chr4_4:74137721-74137740 | None:intergenic | 20.0% |
| !!! | TATTTATCTTTTATTGGTAC+AGG | + | chr4_4:74137915-74137934 | Msa0702500:intron | 20.0% |
| !!! | ATTTTCTTCTAAATATGTTG+AGG | - | chr4_4:74138174-74138193 | None:intergenic | 20.0% |
| !! | TATGTAAAAAATTAGTCACT+CGG | + | chr4_4:74138301-74138320 | Msa0702500:intron | 20.0% |
| !! | TTCTTTCTTTAATCTATCTA+TGG | - | chr4_4:74138392-74138411 | None:intergenic | 20.0% |
| !! | TAGATAGATTAAAGAAAGAA+AGG | + | chr4_4:74138392-74138411 | Msa0702500:intron | 20.0% |
| !!! | TAATATAATCAAGGCTATTT+TGG | - | chr4_4:74138576-74138595 | None:intergenic | 20.0% |
| !! | ATGATGTGTATATTTGTAAA+AGG | - | chr4_4:74138823-74138842 | None:intergenic | 20.0% |
| !! | AATAACTATAAAGTAAGGAT+CGG | - | chr4_4:74139050-74139069 | None:intergenic | 20.0% |
| !!! | AATTATTTTGCTTTAATTCC+AGG | + | chr4_4:74139131-74139150 | Msa0702500:intron | 20.0% |
| !!! | ATTGATTTTTATTACCTTGT+TGG | - | chr4_4:74139250-74139269 | None:intergenic | 20.0% |
| !!! | TTTTTTCTAACTTCAAGTAA+GGG | - | chr4_4:74139389-74139408 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTAACTTCAAGTA+AGG | - | chr4_4:74139390-74139409 | None:intergenic | 20.0% |
| !!! | TTTTGATTAAAACAATGTTG+CGG | - | chr4_4:74139476-74139495 | None:intergenic | 20.0% |
| !! | AAACTGAATATTGAATTCTA+TGG | - | chr4_4:74140228-74140247 | None:intergenic | 20.0% |
| !! | AATATAACTTATTAACCTGA+AGG | - | chr4_4:74140475-74140494 | None:intergenic | 20.0% |
| !! | TTAAATTATTATACTGCTCT+TGG | + | chr4_4:74140506-74140525 | Msa0702500:intron | 20.0% |
| !!! | TGAATTATGGTTTCATATTT+TGG | + | chr4_4:74141207-74141226 | Msa0702500:intron | 20.0% |
| !!! | CTTTTATAGTATTGTTTACT+AGG | - | chr4_4:74141608-74141627 | None:intergenic | 20.0% |
| !! | CTAGTAAACAATACTATAAA+AGG | + | chr4_4:74141606-74141625 | Msa0702500:intron | 20.0% |
| !!! | ATTTTGGTATACATTGTATA+TGG | - | chr4_4:74141677-74141696 | None:intergenic | 20.0% |
| !! | TGCAAAGATAATTTATTGTT+TGG | + | chr4_4:74141696-74141715 | Msa0702500:intron | 20.0% |
| !!! | GTTTACTGTTAATTTCATTT+TGG | - | chr4_4:74142587-74142606 | None:intergenic | 20.0% |
| !!! | TTGTTTAATTTTGGTACAAA+TGG | + | chr4_4:74143055-74143074 | Msa0702500:three_prime_UTR | 20.0% |
| ! | TAATATTGATATGAACCCTA+AGG | + | chr4_4:74136250-74136269 | Msa0702500:intron | 25.0% |
| ! | TTTCAAATATTCCCATAAGT+GGG | - | chr4_4:74136876-74136895 | None:intergenic | 25.0% |
| !! | TTTTCAAATATTCCCATAAG+TGG | - | chr4_4:74136877-74136896 | None:intergenic | 25.0% |
| ! | AGTTCAAAACAAATTTCCAA+AGG | - | chr4_4:74137117-74137136 | None:intergenic | 25.0% |
| ! | TATACTTTCGTTCTTAGTAT+AGG | - | chr4_4:74137404-74137423 | None:intergenic | 25.0% |
| ! | AAAGTATAACTTTGTGTGAA+TGG | + | chr4_4:74137416-74137435 | Msa0702500:intron | 25.0% |
| ! | ATATATCCTTTGTATGGTTT+AGG | + | chr4_4:74137783-74137802 | Msa0702500:CDS | 25.0% |
| ! | AATAACTTTAGTCCATACAT+TGG | - | chr4_4:74138128-74138147 | None:intergenic | 25.0% |
| !! | ATACAAAGACTTTTATTGAG+CGG | + | chr4_4:74138232-74138251 | Msa0702500:intron | 25.0% |
| ! | CAGTGCTAATAATATAATCA+AGG | - | chr4_4:74138585-74138604 | None:intergenic | 25.0% |
| !!! | CGTTTTAATGCCTTAAAAAA+TGG | - | chr4_4:74138610-74138629 | None:intergenic | 25.0% |
| ! | AAAAGAAAGTGAATAGAAAG+TGG | - | chr4_4:74138855-74138874 | None:intergenic | 25.0% |
| !!! | TTTGTTAACTAGCTTTCAAA+TGG | + | chr4_4:74139019-74139038 | Msa0702500:intron | 25.0% |
| ! | ACTGCAATATTTCTTTCTAA+AGG | + | chr4_4:74139356-74139375 | Msa0702500:intron | 25.0% |
| !!! | TTTTTAATTTTCCTAACAGC+AGG | - | chr4_4:74139675-74139694 | None:intergenic | 25.0% |
| !!! | TTCTCTAAAATATGTCTCAT+GGG | - | chr4_4:74139983-74140002 | None:intergenic | 25.0% |
| !!! | ATTCTCTAAAATATGTCTCA+TGG | - | chr4_4:74139984-74140003 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATATGAGAC+AGG | + | chr4_4:74140089-74140108 | Msa0702500:intron | 25.0% |
| !! | TTTAAACTAGGTTGAATACT+AGG | - | chr4_4:74140429-74140448 | None:intergenic | 25.0% |
| ! | CCTATTTATGCTAATATACT+AGG | - | chr4_4:74141501-74141520 | None:intergenic | 25.0% |
| ! | CCTAGTATATTAGCATAAAT+AGG | + | chr4_4:74141498-74141517 | Msa0702500:intron | 25.0% |
| !!! | TAAAAGGTTCTTTTCTAGTT+AGG | + | chr4_4:74141622-74141641 | Msa0702500:intron | 25.0% |
| !!! | AAAAGGTTCTTTTCTAGTTA+GGG | + | chr4_4:74141623-74141642 | Msa0702500:intron | 25.0% |
| !! | ATGCAATAAATTTTCCCTTT+GGG | - | chr4_4:74141857-74141876 | None:intergenic | 25.0% |
| !! | AATGCAATAAATTTTCCCTT+TGG | - | chr4_4:74141858-74141877 | None:intergenic | 25.0% |
| ! | TCAAAAAATATCTCATCAAC+AGG | - | chr4_4:74141948-74141967 | None:intergenic | 25.0% |
| ! | CATAAAACTAAATTGTCACT+TGG | - | chr4_4:74142197-74142216 | None:intergenic | 25.0% |
| !! | TTTATGTGCTTGATTTTACT+TGG | + | chr4_4:74142211-74142230 | Msa0702500:intron | 25.0% |
| !! | TCGAACATATCATTATCTTT+TGG | + | chr4_4:74142280-74142299 | Msa0702500:intron | 25.0% |
| !!! | TTTCAAGTTGCATTGAATTT+TGG | + | chr4_4:74142321-74142340 | Msa0702500:intron | 25.0% |
| ! | CACATTAAGAATTCAAAATC+AGG | - | chr4_4:74142715-74142734 | None:intergenic | 25.0% |
| !! | CTGATTTTGAATTCTTAATG+TGG | + | chr4_4:74142713-74142732 | Msa0702500:intron | 25.0% |
| TTTGTAATAGACTGTTGTTG+AGG | + | chr4_4:74135757-74135776 | Msa0702500:five_prime_UTR | 30.0% | |
| !! | CGATCTTGATTTGATTTGAT+TGG | - | chr4_4:74135790-74135809 | None:intergenic | 30.0% |
| GATAGAAATGATTATTACGG+AGG | + | chr4_4:74136042-74136061 | Msa0702500:CDS | 30.0% | |
| TTATTTGTATGATTCAGCTC+TGG | + | chr4_4:74136171-74136190 | Msa0702500:intron | 30.0% | |
| !! | GATTCAGCTAGAATTGATTT+TGG | - | chr4_4:74136501-74136520 | None:intergenic | 30.0% |
| ! | TTTGGGTGTTTAGTTCATTA+TGG | + | chr4_4:74136595-74136614 | Msa0702500:intron | 30.0% |
| CTTTGTCTTTAACAAAGCAA+AGG | + | chr4_4:74136694-74136713 | Msa0702500:CDS | 30.0% | |
| ! | CTCTACACATTGATTACATT+GGG | + | chr4_4:74136740-74136759 | Msa0702500:intron | 30.0% |
| ! | TTACATTGGGAAATCTGTTT+TGG | + | chr4_4:74136753-74136772 | Msa0702500:intron | 30.0% |
| !!! | TGATGTATTGATTGCGTTTT+TGG | + | chr4_4:74136788-74136807 | Msa0702500:intron | 30.0% |
| TTCAAATATTCCCATAAGTG+GGG | - | chr4_4:74136875-74136894 | None:intergenic | 30.0% | |
| TGTGGTGATTTACGATAAAT+TGG | + | chr4_4:74137277-74137296 | Msa0702500:intron | 30.0% | |
| AAAGCTTCATCTATTCCATT+TGG | + | chr4_4:74137661-74137680 | Msa0702500:intron | 30.0% | |
| AATAAAGCTAAGGATCCAAA+TGG | - | chr4_4:74137679-74137698 | None:intergenic | 30.0% | |
| CTCTGCATATAACTATAAGT+AGG | - | chr4_4:74137730-74137749 | None:intergenic | 30.0% | |
| CCATACAAAGGATATATGTA+AGG | - | chr4_4:74137780-74137799 | None:intergenic | 30.0% | |
| CCTTACATATATCCTTTGTA+TGG | + | chr4_4:74137777-74137796 | Msa0702500:CDS | 30.0% | |
| TGTGAATTAGAAGAGAACAA+GGG | - | chr4_4:74138042-74138061 | None:intergenic | 30.0% | |
| !!! | CAGTAGAAACATGTTTTGAT+TGG | + | chr4_4:74138101-74138120 | Msa0702500:intron | 30.0% |
| ! | TACAAAGACTTTTATTGAGC+GGG | + | chr4_4:74138233-74138252 | Msa0702500:intron | 30.0% |
| AAATTAGTCACTCGGTTATT+TGG | + | chr4_4:74138309-74138328 | Msa0702500:intron | 30.0% | |
| AGATTAAAGAAAGAAAGGCT+AGG | + | chr4_4:74138397-74138416 | Msa0702500:intron | 30.0% | |
| GATTAAAGAAAGAAAGGCTA+GGG | + | chr4_4:74138398-74138417 | Msa0702500:intron | 30.0% | |
| !!! | CTTTTTTATGTGTTGCCAAA+GGG | - | chr4_4:74138455-74138474 | None:intergenic | 30.0% |
| ! | TTGGACTTTTCTCATGAAAT+TGG | - | chr4_4:74138557-74138576 | None:intergenic | 30.0% |
| ! | CATGTAGCTAATACTTTTCA+AGG | + | chr4_4:74138787-74138806 | Msa0702500:intron | 30.0% |
| ! | AGAAGATTTTTGTGGTTGTT+TGG | - | chr4_4:74138881-74138900 | None:intergenic | 30.0% |
| ! | GGAAAGTAAGAAGATTTTTG+TGG | - | chr4_4:74138889-74138908 | None:intergenic | 30.0% |
| GTATAAGGAAAGAATGATAG+TGG | - | chr4_4:74138910-74138929 | None:intergenic | 30.0% | |
| ! | GTGAAAGGAATGAAAGTATA+AGG | - | chr4_4:74138925-74138944 | None:intergenic | 30.0% |
| GTTTAAGGAAAGAAAGTGAA+AGG | - | chr4_4:74138940-74138959 | None:intergenic | 30.0% | |
| GCTAGTTACATTCTTTCTTT+CGG | + | chr4_4:74139101-74139120 | Msa0702500:intron | 30.0% | |
| ! | TATTTTGCTTTAATTCCAGG+TGG | + | chr4_4:74139134-74139153 | Msa0702500:intron | 30.0% |
| !!! | ACAAACAAGTTTTTTGCACT+TGG | - | chr4_4:74139211-74139230 | None:intergenic | 30.0% |
| ! | ATATCTGAAATGACACTTGA+TGG | + | chr4_4:74139446-74139465 | Msa0702500:intron | 30.0% |
| AAAATTTCCACCATTTCAAC+AGG | + | chr4_4:74139492-74139511 | Msa0702500:intron | 30.0% | |
| GTAAAATATTTCCTGCTGTT+AGG | + | chr4_4:74139661-74139680 | Msa0702500:intron | 30.0% | |
| CAATGACTTTGGATTTCTTA+GGG | + | chr4_4:74139726-74139745 | Msa0702500:intron | 30.0% | |
| ACTCAAAGTTCTCACAAATA+TGG | - | chr4_4:74139762-74139781 | None:intergenic | 30.0% | |
| TGCTTATATTCAAGACTAGA+GGG | - | chr4_4:74139819-74139838 | None:intergenic | 30.0% | |
| TTGCTTATATTCAAGACTAG+AGG | - | chr4_4:74139820-74139839 | None:intergenic | 30.0% | |
| ! | AAACGATTTTCATGTATGAG+TGG | - | chr4_4:74140138-74140157 | None:intergenic | 30.0% |
| !! | TTCTATGGCTTTGTTGAATA+TGG | - | chr4_4:74140213-74140232 | None:intergenic | 30.0% |
| TTGAAAAGCTGATATGATTG+TGG | + | chr4_4:74140264-74140283 | Msa0702500:intron | 30.0% | |
| ! | CTTAATAGTTCTGCTTAACT+GGG | + | chr4_4:74140368-74140387 | Msa0702500:intron | 30.0% |
| TACTAGTTATACGCTTATAC+TGG | + | chr4_4:74140403-74140422 | Msa0702500:intron | 30.0% | |
| TTAGTATAAATAGGACCTTC+AGG | + | chr4_4:74140457-74140476 | Msa0702500:intron | 30.0% | |
| ! | AATTGCAATCACTAGGTTTT+GGG | + | chr4_4:74140767-74140786 | Msa0702500:intron | 30.0% |
| TAGTTGTAGAATTCTACAAC+AGG | + | chr4_4:74141091-74141110 | Msa0702500:intron | 30.0% | |
| TATGGAGAACATGTTATTGT+AGG | + | chr4_4:74141148-74141167 | Msa0702500:intron | 30.0% | |
| ATGGAGAACATGTTATTGTA+GGG | + | chr4_4:74141149-74141168 | Msa0702500:intron | 30.0% | |
| TCAGAAACATACAATGTTAG+TGG | + | chr4_4:74141444-74141463 | Msa0702500:intron | 30.0% | |
| !! | TACAATGTTAGTGGTCTTAT+TGG | + | chr4_4:74141453-74141472 | Msa0702500:intron | 30.0% |
| TTAGCATAAATAGGACCATT+AGG | + | chr4_4:74141507-74141526 | Msa0702500:intron | 30.0% | |
| ATATTGAAATGCTGACCTAA+TGG | - | chr4_4:74141525-74141544 | None:intergenic | 30.0% | |
| GAATGATTGCAAATATCCAT+AGG | - | chr4_4:74141653-74141672 | None:intergenic | 30.0% | |
| !!! | TTATTTTTTTTGTCATGGGC+AGG | + | chr4_4:74141796-74141815 | Msa0702500:intron | 30.0% |
| TATTGCATTTGTATCAACTG+AGG | + | chr4_4:74141869-74141888 | Msa0702500:CDS | 30.0% | |
| TTATCAACGTATACATGTTG+AGG | - | chr4_4:74142153-74142172 | None:intergenic | 30.0% | |
| !! | AACATGTATACGTTGATAAC+TGG | + | chr4_4:74142154-74142173 | Msa0702500:CDS | 30.0% |
| GATAATTTACTAGTGACTGT+CGG | + | chr4_4:74142512-74142531 | Msa0702500:intron | 30.0% | |
| TGAAATTAACAGTAAACCCA+TGG | + | chr4_4:74142590-74142609 | Msa0702500:intron | 30.0% | |
| TTAATGTGGTGAATTTGAAC+AGG | + | chr4_4:74142727-74142746 | Msa0702500:intron | 30.0% | |
| ACATTTAACAAACGAGCAAT+TGG | - | chr4_4:74143103-74143122 | None:intergenic | 30.0% | |
| AAGACACGACAACTATTTAT+GGG | + | chr4_4:74143144-74143163 | Msa0702500:three_prime_UTR | 30.0% | |
| ATTCTTCATCCATCTTCGAT+CGG | - | chr4_4:74135846-74135865 | None:intergenic | 35.0% | |
| AGAATACGATGTAATCGTTC+TGG | + | chr4_4:74135861-74135880 | Msa0702500:CDS | 35.0% | |
| GAATACGATGTAATCGTTCT+GGG | + | chr4_4:74135862-74135881 | Msa0702500:CDS | 35.0% | |
| !! | TTGAAGTGTTGGTTACTTTG+AGG | - | chr4_4:74135936-74135955 | None:intergenic | 35.0% |
| ! | TGAAATCAGTGTTGAAGTGT+TGG | - | chr4_4:74135947-74135966 | None:intergenic | 35.0% |
| ! | TTTTGCTTAGGTTCTTCACA+TGG | + | chr4_4:74136020-74136039 | Msa0702500:intron | 35.0% |
| CTGAATAAGATTAAGGGAAG+TGG | - | chr4_4:74136073-74136092 | None:intergenic | 35.0% | |
| CACTTCCCTTAATCTTATTC+AGG | + | chr4_4:74136071-74136090 | Msa0702500:CDS | 35.0% | |
| AGTGAGAGTTGAATGTAAAG+TGG | + | chr4_4:74136360-74136379 | Msa0702500:intron | 35.0% | |
| !! | TCAGCTAGAATTGATTTTGG+AGG | - | chr4_4:74136498-74136517 | None:intergenic | 35.0% |
| ! | GTTTAGTTCATTATGGCCAA+TGG | + | chr4_4:74136602-74136621 | Msa0702500:intron | 35.0% |
| GTATCTCTATTTCAAAGCTG+TGG | + | chr4_4:74136664-74136683 | Msa0702500:CDS | 35.0% | |
| ! | GCTCTACACATTGATTACAT+TGG | + | chr4_4:74136739-74136758 | Msa0702500:intron | 35.0% |
| !!! | TGTATTGATTGCGTTTTTGG+TGG | + | chr4_4:74136791-74136810 | Msa0702500:intron | 35.0% |
| !!! | GTATTGATTGCGTTTTTGGT+GGG | + | chr4_4:74136792-74136811 | Msa0702500:intron | 35.0% |
| !! | GTGGGAAATTCCACTTTTAT+AGG | + | chr4_4:74136810-74136829 | Msa0702500:intron | 35.0% |
| !! | TCCACTTTTATAGGTTCACA+AGG | + | chr4_4:74136819-74136838 | Msa0702500:intron | 35.0% |
| ACCTTGTGAACCTATAAAAG+TGG | - | chr4_4:74136823-74136842 | None:intergenic | 35.0% | |
| AAATGAAAAACTTGCGTGCA+CGG | - | chr4_4:74136903-74136922 | None:intergenic | 35.0% | |
| CTGATCCTAAAACTCATGAT+GGG | + | chr4_4:74136944-74136963 | Msa0702500:CDS | 35.0% | |
| GAGTACTAAGGCAATACAAA+GGG | - | chr4_4:74137086-74137105 | None:intergenic | 35.0% | |
| ! | AGAGTACTAAGGCAATACAA+AGG | - | chr4_4:74137087-74137106 | None:intergenic | 35.0% |
| ! | AAGGACTATACAGAGTACTA+AGG | - | chr4_4:74137098-74137117 | None:intergenic | 35.0% |
| TAGTACTCTGTATAGTCCTT+TGG | + | chr4_4:74137098-74137117 | Msa0702500:intron | 35.0% | |
| CATATTAAGGTCGAAAGACA+TGG | - | chr4_4:74137145-74137164 | None:intergenic | 35.0% | |
| CATGTCTTTCGACCTTAATA+TGG | + | chr4_4:74137143-74137162 | Msa0702500:intron | 35.0% | |
| GAATTCAAATTCCAAGCTTG+TGG | + | chr4_4:74137259-74137278 | Msa0702500:intron | 35.0% | |
| ACCATATGTATTTGTAGGGT+AGG | + | chr4_4:74137368-74137387 | Msa0702500:intron | 35.0% | |
| ACCTACCCTACAAATACATA+TGG | - | chr4_4:74137372-74137391 | None:intergenic | 35.0% | |
| TTGACCCATGACAGAAAATT+TGG | + | chr4_4:74137476-74137495 | Msa0702500:intron | 35.0% | |
| ! | AAGGCCAAATTTTCTGTCAT+GGG | - | chr4_4:74137483-74137502 | None:intergenic | 35.0% |
| AAGTAGGAAATATAGGCCAA+TGG | - | chr4_4:74137714-74137733 | None:intergenic | 35.0% | |
| ! | TGTTAGATTTGTTCTGCTCA+TGG | + | chr4_4:74137883-74137902 | Msa0702500:intron | 35.0% |
| GTTGAATAAACCTGAATGCA+AGG | + | chr4_4:74137978-74137997 | Msa0702500:CDS | 35.0% | |
| AGTATATCTACCTTGCATTC+AGG | - | chr4_4:74137991-74138010 | None:intergenic | 35.0% | |
| GTGTGAATTAGAAGAGAACA+AGG | - | chr4_4:74138043-74138062 | None:intergenic | 35.0% | |
| ATTCACACTAATGTGTGACT+TGG | + | chr4_4:74138055-74138074 | Msa0702500:intron | 35.0% | |
| !!! | GTTTTGATTGGTCCAATGTA+TGG | + | chr4_4:74138113-74138132 | Msa0702500:intron | 35.0% |
| TCCAAACACACCAATGTATT+GGG | - | chr4_4:74138368-74138387 | None:intergenic | 35.0% | |
| ATCCAAACACACCAATGTAT+TGG | - | chr4_4:74138369-74138388 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTATGTGTTGCCAA+AGG | - | chr4_4:74138456-74138475 | None:intergenic | 35.0% |
| CCTTTGGCAACACATAAAAA+AGG | + | chr4_4:74138453-74138472 | Msa0702500:intron | 35.0% | |
| !!! | TGGAAAGAAAGTTTTGAGGT+GGG | + | chr4_4:74138478-74138497 | Msa0702500:intron | 35.0% |
| !!! | TAGCACTGTGCCATTTTTTA+AGG | + | chr4_4:74138597-74138616 | Msa0702500:intron | 35.0% |
| GAAAGTGAATAGAAAGTGGA+AGG | - | chr4_4:74138851-74138870 | None:intergenic | 35.0% | |
| GGTTTGCAGAAGAATGTTTA+AGG | - | chr4_4:74138955-74138974 | None:intergenic | 35.0% | |
| TAAGAGACTATGGGTATGTT+TGG | - | chr4_4:74138976-74138995 | None:intergenic | 35.0% | |
| CAACGAGTTTAAGAGACTAT+GGG | - | chr4_4:74138985-74139004 | None:intergenic | 35.0% | |
| TCAACGAGTTTAAGAGACTA+TGG | - | chr4_4:74138986-74139005 | None:intergenic | 35.0% | |
| ! | GGAATTTGATGATCAAGGAA+AGG | + | chr4_4:74139155-74139174 | Msa0702500:CDS | 35.0% |
| GATGATCAAGGAAAGGTTAT+TGG | + | chr4_4:74139162-74139181 | Msa0702500:CDS | 35.0% | |
| AGTTTCACTATAACCTGAAC+TGG | - | chr4_4:74139295-74139314 | None:intergenic | 35.0% | |
| ACTATTAGCATAGCGACTTT+AGG | - | chr4_4:74139334-74139353 | None:intergenic | 35.0% | |
| TGACTTACATGTCTGACTTT+CGG | - | chr4_4:74139627-74139646 | None:intergenic | 35.0% | |
| CTAAGTTCTTCCAATGACTT+TGG | + | chr4_4:74139715-74139734 | Msa0702500:intron | 35.0% | |
| CCTAAGAAATCCAAAGTCAT+TGG | - | chr4_4:74139728-74139747 | None:intergenic | 35.0% | |
| CCAATGACTTTGGATTTCTT+AGG | + | chr4_4:74139725-74139744 | Msa0702500:intron | 35.0% | |
| ! | AACAAAATCGTCGTGTTTTG+TGG | + | chr4_4:74139838-74139857 | Msa0702500:intron | 35.0% |
| TTGCTTATATATGAGACAGG+AGG | + | chr4_4:74140092-74140111 | Msa0702500:intron | 35.0% | |
| TGCTTATATATGAGACAGGA+GGG | + | chr4_4:74140093-74140112 | Msa0702500:intron | 35.0% | |
| !! | GCAATGTTTTGGATATCAGT+TGG | - | chr4_4:74140173-74140192 | None:intergenic | 35.0% |
| ! | ATCTAGTCATCGCAATGTTT+TGG | - | chr4_4:74140184-74140203 | None:intergenic | 35.0% |
| AAAAGCTGATATGATTGTGG+TGG | + | chr4_4:74140267-74140286 | Msa0702500:intron | 35.0% | |
| AAAGCTGATATGATTGTGGT+GGG | + | chr4_4:74140268-74140287 | Msa0702500:intron | 35.0% | |
| ! | GCTTAATAGTTCTGCTTAAC+TGG | + | chr4_4:74140367-74140386 | Msa0702500:intron | 35.0% |
| GGGAAGAAAAGAACAAAAGA+GGG | - | chr4_4:74140539-74140558 | None:intergenic | 35.0% | |
| TTATATTCTTGTCCAACCGA+TGG | + | chr4_4:74140584-74140603 | Msa0702500:intron | 35.0% | |
| AACAGCTTAAGTAGAGAAAG+AGG | - | chr4_4:74140620-74140639 | None:intergenic | 35.0% | |
| TTAGCACTAGATCAGTTAAG+TGG | - | chr4_4:74140690-74140709 | None:intergenic | 35.0% | |
| TTCCCCAAATTGATCTACTT+GGG | + | chr4_4:74140731-74140750 | Msa0702500:intron | 35.0% | |
| TACCCAAGTAGATCAATTTG+GGG | - | chr4_4:74140736-74140755 | None:intergenic | 35.0% | |
| GTACCCAAGTAGATCAATTT+GGG | - | chr4_4:74140737-74140756 | None:intergenic | 35.0% | |
| AGTACCCAAGTAGATCAATT+TGG | - | chr4_4:74140738-74140757 | None:intergenic | 35.0% | |
| ! | CAATTGCAATCACTAGGTTT+TGG | + | chr4_4:74140766-74140785 | Msa0702500:intron | 35.0% |
| GAGCTGCTCAACTATTTATA+TGG | + | chr4_4:74140888-74140907 | Msa0702500:intron | 35.0% | |
| TTATTAAGGCCGAGTAGATT+TGG | - | chr4_4:74141051-74141070 | None:intergenic | 35.0% | |
| AGACAGGAGAAGGATTATTA+AGG | - | chr4_4:74141065-74141084 | None:intergenic | 35.0% | |
| TCAAAAAGTCCCATGCTTAT+TGG | - | chr4_4:74141190-74141209 | None:intergenic | 35.0% | |
| ! | GCATGGGACTTTTTGAATTA+TGG | + | chr4_4:74141194-74141213 | Msa0702500:intron | 35.0% |
| CAACTAAGAGAGGATTCTAA+TGG | + | chr4_4:74141420-74141439 | Msa0702500:intron | 35.0% | |
| TGCTAATATACTAGGTCAAC+AGG | - | chr4_4:74141493-74141512 | None:intergenic | 35.0% | |
| CGAAATAAAGCAGTTGTCTA+GGG | - | chr4_4:74142006-74142025 | None:intergenic | 35.0% | |
| TCGAAATAAAGCAGTTGTCT+AGG | - | chr4_4:74142007-74142026 | None:intergenic | 35.0% | |
| !! | TACTGTTGATTCAAAGTGAG+TGG | - | chr4_4:74142122-74142141 | None:intergenic | 35.0% |
| TCACTTTGAATCAACAGTAC+TGG | + | chr4_4:74142123-74142142 | Msa0702500:CDS | 35.0% | |
| !! | GTATACGTTGATAACTGGAA+AGG | + | chr4_4:74142159-74142178 | Msa0702500:CDS | 35.0% |
| CTGCTATTGTTACGCTATAA+CGG | + | chr4_4:74142251-74142270 | Msa0702500:intron | 35.0% | |
| TGTCAGGAATAAGAAAGATG+AGG | - | chr4_4:74142354-74142373 | None:intergenic | 35.0% | |
| TCGTTGTAAAGTGCAAAGTA+TGG | - | chr4_4:74142852-74142871 | None:intergenic | 35.0% | |
| ! | TGTAGAACAGATTTGTTTGC+AGG | + | chr4_4:74142939-74142958 | Msa0702500:three_prime_UTR | 35.0% |
| ! | GTAGAACAGATTTGTTTGCA+GGG | + | chr4_4:74142940-74142959 | Msa0702500:three_prime_UTR | 35.0% |
| CAAGACACGACAACTATTTA+TGG | + | chr4_4:74143143-74143162 | Msa0702500:three_prime_UTR | 35.0% | |
| TTCAGACTGCTTCTTCTACT+CGG | - | chr4_4:74135726-74135745 | None:intergenic | 40.0% | |
| CTCAAAGAATGCATTCTCAG+TGG | + | chr4_4:74135892-74135911 | Msa0702500:CDS | 40.0% | |
| !! | TTCAGCTCTGGAAGAAATTC+AGG | + | chr4_4:74136183-74136202 | Msa0702500:intron | 40.0% |
| !! | TCAGCTCTGGAAGAAATTCA+GGG | + | chr4_4:74136184-74136203 | Msa0702500:intron | 40.0% |
| TCTTTGCTAGAACCCAAATG+AGG | - | chr4_4:74136227-74136246 | None:intergenic | 40.0% | |
| TACAATTCCTAGCTTCACGT+CGG | + | chr4_4:74136447-74136466 | Msa0702500:intron | 40.0% | |
| CTCTATTTCAAAGCTGTGGA+TGG | + | chr4_4:74136668-74136687 | Msa0702500:CDS | 40.0% | |
| ! | CAAGGTACCTTCAAATGACA+TGG | + | chr4_4:74136837-74136856 | Msa0702500:CDS | 40.0% |
| ! | AAAGCCTCCATGTCATTTGA+AGG | - | chr4_4:74136847-74136866 | None:intergenic | 40.0% |
| GCTGATCCTAAAACTCATGA+TGG | + | chr4_4:74136943-74136962 | Msa0702500:CDS | 40.0% | |
| ! | TCCTAAAACTCATGATGGGA+TGG | + | chr4_4:74136948-74136967 | Msa0702500:CDS | 40.0% |
| ! | TCCATCCCATCATGAGTTTT+AGG | - | chr4_4:74136952-74136971 | None:intergenic | 40.0% |
| CTTGACAAGAGTCACTACTA+AGG | + | chr4_4:74136972-74136991 | Msa0702500:CDS | 40.0% | |
| TACTAAGGCAATACAAAGGG+TGG | - | chr4_4:74137083-74137102 | None:intergenic | 40.0% | |
| ATCGTAAATCACCACAAGCT+TGG | - | chr4_4:74137273-74137292 | None:intergenic | 40.0% | |
| ! | CAAGGCCAAATTTTCTGTCA+TGG | - | chr4_4:74137484-74137503 | None:intergenic | 40.0% |
| AGTCCACAGTGTTATCATCA+AGG | - | chr4_4:74137502-74137521 | None:intergenic | 40.0% | |
| GATAACACTGTGGACTTCAT+TGG | + | chr4_4:74137506-74137525 | Msa0702500:CDS | 40.0% | |
| AGACACTGTGAAGAGAATGA+AGG | + | chr4_4:74137580-74137599 | Msa0702500:CDS | 40.0% | |
| AAGCGCACACAATAAAGCTA+AGG | - | chr4_4:74137689-74137708 | None:intergenic | 40.0% | |
| TATTGTGTGCGCTTATCCAT+TGG | + | chr4_4:74137695-74137714 | Msa0702500:intron | 40.0% | |
| AGTCTCTTGCACGATTTCAA+GGG | + | chr4_4:74137748-74137767 | Msa0702500:CDS | 40.0% | |
| AGCTCTCCTAAACCATACAA+AGG | - | chr4_4:74137792-74137811 | None:intergenic | 40.0% | |
| CGGATAAACAGATGTAGACA+GGG | - | chr4_4:74137826-74137845 | None:intergenic | 40.0% | |
| ACGGATAAACAGATGTAGAC+AGG | - | chr4_4:74137827-74137846 | None:intergenic | 40.0% | |
| ATTCTCAACAGGAGATAGAG+CGG | - | chr4_4:74137857-74137876 | None:intergenic | 40.0% | |
| TCTATCTCCTGTTGAGAATG+TGG | + | chr4_4:74137858-74137877 | Msa0702500:intron | 40.0% | |
| TAACACACCACATTCTCAAC+AGG | - | chr4_4:74137868-74137887 | None:intergenic | 40.0% | |
| TATTGGTACAGGCATTTGCA+CGG | + | chr4_4:74137926-74137945 | Msa0702500:intron | 40.0% | |
| TGAATCCAACCCCAATACAT+TGG | + | chr4_4:74138355-74138374 | Msa0702500:intron | 40.0% | |
| CCAAACACACCAATGTATTG+GGG | - | chr4_4:74138367-74138386 | None:intergenic | 40.0% | |
| AAGAAAGGCTAGGGAAAGAA+AGG | + | chr4_4:74138407-74138426 | Msa0702500:intron | 40.0% | |
| ! | TTTTATGTGTTGCCAAAGGG+TGG | - | chr4_4:74138452-74138471 | None:intergenic | 40.0% |
| GGCAACACATAAAAAAGGTG+TGG | + | chr4_4:74138458-74138477 | Msa0702500:intron | 40.0% | |
| ! | GGTGTGGAAAGAAAGTTTTG+AGG | + | chr4_4:74138474-74138493 | Msa0702500:intron | 40.0% |
| !!! | GTGGAAAGAAAGTTTTGAGG+TGG | + | chr4_4:74138477-74138496 | Msa0702500:intron | 40.0% |
| !!! | TGTGGAAAGGTTTTGAGTGT+GGG | - | chr4_4:74138505-74138524 | None:intergenic | 40.0% |
| ! | TCTCATGAAATTGGTGCCTT+TGG | - | chr4_4:74138548-74138567 | None:intergenic | 40.0% |
| GCATCATGTACAAGCATACT+AGG | + | chr4_4:74138640-74138659 | Msa0702500:intron | 40.0% | |
| CTTGATCATCAAATTCCACC+TGG | - | chr4_4:74139152-74139171 | None:intergenic | 40.0% | |
| ! | CAGGTGGAATTTGATGATCA+AGG | + | chr4_4:74139150-74139169 | Msa0702500:intron | 40.0% |
| TCCATCATACTTGACCAACA+AGG | + | chr4_4:74139233-74139252 | Msa0702500:CDS | 40.0% | |
| ACCTTGTTGGTCAAGTATGA+TGG | - | chr4_4:74139237-74139256 | None:intergenic | 40.0% | |
| !! | GAGAATAACTTGCACCGATT+GGG | - | chr4_4:74139587-74139606 | None:intergenic | 40.0% |
| TATTCTCCCACAAAAGCAAC+TGG | + | chr4_4:74139600-74139619 | Msa0702500:CDS | 40.0% | |
| ATTCTCCCACAAAAGCAACT+GGG | + | chr4_4:74139601-74139620 | Msa0702500:CDS | 40.0% | |
| GACTTTGGATTTCTTAGGGA+TGG | + | chr4_4:74139730-74139749 | Msa0702500:intron | 40.0% | |
| GGATTTCTTAGGGATGGTAA+TGG | + | chr4_4:74139736-74139755 | Msa0702500:intron | 40.0% | |
| ! | TCTCATGGGAACTTGTTTCA+TGG | - | chr4_4:74139969-74139988 | None:intergenic | 40.0% |
| CGGGAAGAAAAGAACAAAAG+AGG | - | chr4_4:74140540-74140559 | None:intergenic | 40.0% | |
| GGGAACATATCTCAATGTGT+TGG | - | chr4_4:74140716-74140735 | None:intergenic | 40.0% | |
| GTTCCCCAAATTGATCTACT+TGG | + | chr4_4:74140730-74140749 | Msa0702500:intron | 40.0% | |
| CACTGTCAATTGCAATCACT+AGG | + | chr4_4:74140760-74140779 | Msa0702500:intron | 40.0% | |
| TTTGCAAATGAACAGCACCA+GGG | - | chr4_4:74140841-74140860 | None:intergenic | 40.0% | |
| ATTTGCAAATGAACAGCACC+AGG | - | chr4_4:74140842-74140861 | None:intergenic | 40.0% | |
| GTTGAGCAGCTCTACAATTA+GGG | - | chr4_4:74140880-74140899 | None:intergenic | 40.0% | |
| AGTTGAGCAGCTCTACAATT+AGG | - | chr4_4:74140881-74140900 | None:intergenic | 40.0% | |
| CTCACTCTCAGATAATCCAT+CGG | + | chr4_4:74140933-74140952 | Msa0702500:intron | 40.0% | |
| ATCCTTTCTCGAAGGATGTA+AGG | + | chr4_4:74141025-74141044 | Msa0702500:intron | 40.0% | |
| GATGTAAGGCCAAATCTACT+CGG | + | chr4_4:74141039-74141058 | Msa0702500:intron | 40.0% | |
| TCTACAACTAGAACAGAGAC+AGG | - | chr4_4:74141081-74141100 | None:intergenic | 40.0% | |
| AAACTCCATACTGGGAAACA+TGG | - | chr4_4:74141117-74141136 | None:intergenic | 40.0% | |
| TGTTTCCCAGTATGGAGTTT+CGG | + | chr4_4:74141117-74141136 | Msa0702500:intron | 40.0% | |
| TAAACCCGAAACTCCATACT+GGG | - | chr4_4:74141125-74141144 | None:intergenic | 40.0% | |
| ATAAACCCGAAACTCCATAC+TGG | - | chr4_4:74141126-74141145 | None:intergenic | 40.0% | |
| !! | GGAGTTTCGGGTTTATTGTA+TGG | + | chr4_4:74141130-74141149 | Msa0702500:intron | 40.0% |
| ATGCTTATTGGACATCAGGA+TGG | - | chr4_4:74141178-74141197 | None:intergenic | 40.0% | |
| ATCCTGATGTCCAATAAGCA+TGG | + | chr4_4:74141177-74141196 | Msa0702500:intron | 40.0% | |
| TCCTGATGTCCAATAAGCAT+GGG | + | chr4_4:74141178-74141197 | Msa0702500:intron | 40.0% | |
| !! | GTCTGGGATAGCATTGTTTT+CGG | - | chr4_4:74141360-74141379 | None:intergenic | 40.0% |
| TGCTTCTACTCAACTAAGAG+AGG | + | chr4_4:74141410-74141429 | Msa0702500:intron | 40.0% | |
| !!! | GGTTCTTTTCTAGTTAGGGT+AGG | + | chr4_4:74141627-74141646 | Msa0702500:intron | 40.0% |
| GAGAATACGAGCAACAGAAT+AGG | - | chr4_4:74141824-74141843 | None:intergenic | 40.0% | |
| TTCTCACAATGTTTGCCCAA+AGG | + | chr4_4:74141839-74141858 | Msa0702500:CDS | 40.0% | |
| TCTCACAATGTTTGCCCAAA+GGG | + | chr4_4:74141840-74141859 | Msa0702500:CDS | 40.0% | |
| AAACCTGGAATTGACCTTCT+AGG | + | chr4_4:74141921-74141940 | Msa0702500:CDS | 40.0% | |
| ! | ATAAAGCAGTTGTCTAGGGT+GGG | - | chr4_4:74142002-74142021 | None:intergenic | 40.0% |
| AATAAAGCAGTTGTCTAGGG+TGG | - | chr4_4:74142003-74142022 | None:intergenic | 40.0% | |
| ! | CAAATTTTCAGCCATACAGC+TGG | - | chr4_4:74142379-74142398 | None:intergenic | 40.0% |
| AATTTACTAGTGACTGTCGG+TGG | + | chr4_4:74142515-74142534 | Msa0702500:intron | 40.0% | |
| ATTTACTAGTGACTGTCGGT+GGG | + | chr4_4:74142516-74142535 | Msa0702500:intron | 40.0% | |
| GATTTCCATGCTTAGCCAAA+GGG | - | chr4_4:74142638-74142657 | None:intergenic | 40.0% | |
| AGATTTCCATGCTTAGCCAA+AGG | - | chr4_4:74142639-74142658 | None:intergenic | 40.0% | |
| !! | CTCGAATCTCGATTGTTTTG+TGG | + | chr4_4:74142681-74142700 | Msa0702500:intron | 40.0% |
| GCAACACATAACAGACACAA+AGG | - | chr4_4:74142820-74142839 | None:intergenic | 40.0% | |
| GTGCAAAGTATGGATTCCAT+CGG | - | chr4_4:74142842-74142861 | None:intergenic | 40.0% | |
| ! | AATTGCTTAAAGAGTGCACC+AGG | - | chr4_4:74143214-74143233 | None:intergenic | 40.0% |
| GAGTAGAAGAAGCAGTCTGA+AGG | + | chr4_4:74135725-74135744 | Msa0702500:five_prime_UTR | 45.0% | |
| !! | GATGTAATCGTTCTGGGAAC+TGG | + | chr4_4:74135868-74135887 | Msa0702500:CDS | 45.0% |
| !! | CAGCTCTGGAAGAAATTCAG+GGG | + | chr4_4:74136185-74136204 | Msa0702500:intron | 45.0% |
| TTGCTAGAACCCAAATGAGG+AGG | - | chr4_4:74136224-74136243 | None:intergenic | 45.0% | |
| AACCCTCACTAATGTGCCAT+TGG | - | chr4_4:74136621-74136640 | None:intergenic | 45.0% | |
| GGTACCTTCAAATGACATGG+AGG | + | chr4_4:74136840-74136859 | Msa0702500:CDS | 45.0% | |
| !! | GCTTTGAAGTCCCCACTTAT+GGG | + | chr4_4:74136862-74136881 | Msa0702500:CDS | 45.0% |
| CTGTCATGGGTCAACAAGAA+AGG | - | chr4_4:74137470-74137489 | None:intergenic | 45.0% | |
| ! | TGGCCTTGATGATAACACTG+TGG | + | chr4_4:74137496-74137515 | Msa0702500:CDS | 45.0% |
| GGACTTCATTGGTCATGCTT+TGG | + | chr4_4:74137517-74137536 | Msa0702500:CDS | 45.0% | |
| GAGAATGAAGGTAAGTGTGC+TGG | + | chr4_4:74137592-74137611 | Msa0702500:intron | 45.0% | |
| GAGTCTCTTGCACGATTTCA+AGG | + | chr4_4:74137747-74137766 | Msa0702500:CDS | 45.0% | |
| GTCTCTTGCACGATTTCAAG+GGG | + | chr4_4:74137749-74137768 | Msa0702500:CDS | 45.0% | |
| TCTCTTGCACGATTTCAAGG+GGG | + | chr4_4:74137750-74137769 | Msa0702500:CDS | 45.0% | |
| ACACACCAATGTATTGGGGT+TGG | - | chr4_4:74138363-74138382 | None:intergenic | 45.0% | |
| CCCCAATACATTGGTGTGTT+TGG | + | chr4_4:74138364-74138383 | Msa0702500:intron | 45.0% | |
| TACAGTACCTTTCCACCCTT+TGG | + | chr4_4:74138437-74138456 | Msa0702500:intron | 45.0% | |
| !!! | GTGTGGAAAGGTTTTGAGTG+TGG | - | chr4_4:74138506-74138525 | None:intergenic | 45.0% |
| CCTTTCCACACATCCATGAA+CGG | + | chr4_4:74138515-74138534 | Msa0702500:intron | 45.0% | |
| TGTTTCCGTTCATGGATGTG+TGG | - | chr4_4:74138523-74138542 | None:intergenic | 45.0% | |
| CTTTGGCATGTTTCCGTTCA+TGG | - | chr4_4:74138531-74138550 | None:intergenic | 45.0% | |
| CATGAACGGAAACATGCCAA+AGG | + | chr4_4:74138529-74138548 | Msa0702500:intron | 45.0% | |
| TTATTGGCGTCACGTCTGAA+GGG | + | chr4_4:74139178-74139197 | Msa0702500:CDS | 45.0% | |
| TGACTACTTGCAACCAGTTC+AGG | + | chr4_4:74139279-74139298 | Msa0702500:intron | 45.0% | |
| TTCCACCATTTCAACAGGTG+AGG | + | chr4_4:74139497-74139516 | Msa0702500:intron | 45.0% | |
| TTCCTCACCTGTTGAAATGG+TGG | - | chr4_4:74139502-74139521 | None:intergenic | 45.0% | |
| ACCATTTCAACAGGTGAGGA+AGG | + | chr4_4:74139501-74139520 | Msa0702500:intron | 45.0% | |
| ACCTTCCTCACCTGTTGAAA+TGG | - | chr4_4:74139505-74139524 | None:intergenic | 45.0% | |
| TTTCAACAGGTGAGGAAGGT+TGG | + | chr4_4:74139505-74139524 | Msa0702500:intron | 45.0% | |
| !! | GAAGGTTGGTAAGGTTGCAA+GGG | + | chr4_4:74139519-74139538 | Msa0702500:CDS | 45.0% |
| ! | GGAGAATAACTTGCACCGAT+TGG | - | chr4_4:74139588-74139607 | None:intergenic | 45.0% |
| AGCACTGTTGCAATGCAAAC+GGG | - | chr4_4:74140559-74140578 | None:intergenic | 45.0% | |
| CAGCACTGTTGCAATGCAAA+CGG | - | chr4_4:74140560-74140579 | None:intergenic | 45.0% | |
| TTGTCCAACCGATGGCTATT+TGG | + | chr4_4:74140592-74140611 | Msa0702500:intron | 45.0% | |
| AAGAGGCTCCAAATAGCCAT+CGG | - | chr4_4:74140603-74140622 | None:intergenic | 45.0% | |
| GGGAGAGGTAATGAAGTTTG+TGG | - | chr4_4:74140805-74140824 | None:intergenic | 45.0% | |
| TTGCAAATGAACAGCACCAG+GGG | - | chr4_4:74140840-74140859 | None:intergenic | 45.0% | |
| CAAGATCATTGACACTCCGA+TGG | - | chr4_4:74140952-74140971 | None:intergenic | 45.0% | |
| TCCTTCGAGAAAGGATAGTG+CGG | - | chr4_4:74141021-74141040 | None:intergenic | 45.0% | |
| ACTAGAACAGAGACAGGAGA+AGG | - | chr4_4:74141075-74141094 | None:intergenic | 45.0% | |
| GTTTCCCAGTATGGAGTTTC+GGG | + | chr4_4:74141118-74141137 | Msa0702500:intron | 45.0% | |
| TCCCATGCTTATTGGACATC+AGG | - | chr4_4:74141182-74141201 | None:intergenic | 45.0% | |
| !!! | GCTTGCCTGTTTTTGAGAAC+CGG | + | chr4_4:74141290-74141309 | Msa0702500:intron | 45.0% |
| !!! | CTTGCCTGTTTTTGAGAACC+GGG | + | chr4_4:74141291-74141310 | Msa0702500:intron | 45.0% |
| !!! | TTGCCTGTTTTTGAGAACCG+GGG | + | chr4_4:74141292-74141311 | Msa0702500:intron | 45.0% |
| AGTAACCACTATAACAGCCC+CGG | - | chr4_4:74141312-74141331 | None:intergenic | 45.0% | |
| GCTGTAGAGATACTCAGTCT+GGG | - | chr4_4:74141376-74141395 | None:intergenic | 45.0% | |
| AGCTGTAGAGATACTCAGTC+TGG | - | chr4_4:74141377-74141396 | None:intergenic | 45.0% | |
| ! | TTCTAGTTAGGGTAGGCCTA+TGG | + | chr4_4:74141634-74141653 | Msa0702500:intron | 45.0% |
| CCAGGTTTCAGTTCAATTGC+AGG | - | chr4_4:74141909-74141928 | None:intergenic | 45.0% | |
| CCTGCAATTGAACTGAAACC+TGG | + | chr4_4:74141906-74141925 | Msa0702500:CDS | 45.0% | |
| TCTCATCAACAGGTCCTAGA+AGG | - | chr4_4:74141938-74141957 | None:intergenic | 45.0% | |
| CAGGTTTCTCGTACATCCAT+GGG | - | chr4_4:74142609-74142628 | None:intergenic | 45.0% | |
| TCTTTACTCTTCTGCAGCAC+TGG | - | chr4_4:74142783-74142802 | None:intergenic | 45.0% | |
| TGTCTGTTATGTGTTGCCGA+TGG | + | chr4_4:74142823-74142842 | Msa0702500:three_prime_UTR | 45.0% | |
| !!! | TTTAATTATTTATCTTTTAT+TGG | + | chr4_4:74137909-74137928 | Msa0702500:intron | 5.0% |
| !! | AAATATTATTTAGTATAAAT+AGG | + | chr4_4:74140448-74140467 | Msa0702500:intron | 5.0% |
| !!! | AAAAAAATAATAATATTTTG+AGG | + | chr4_4:74141725-74141744 | Msa0702500:intron | 5.0% |
| ATCGGAGATCGCAGTCGAAA+GGG | - | chr4_4:74135828-74135847 | None:intergenic | 50.0% | |
| !! | GGTTACTTTGAGGCCATCGA+CGG | - | chr4_4:74135926-74135945 | None:intergenic | 50.0% |
| TGACAAGCCTCCTCCTCATT+TGG | + | chr4_4:74136211-74136230 | Msa0702500:intron | 50.0% | |
| GACAAGCCTCCTCCTCATTT+GGG | + | chr4_4:74136212-74136231 | Msa0702500:intron | 50.0% | |
| CTAGAACCCAAATGAGGAGG+AGG | - | chr4_4:74136221-74136240 | None:intergenic | 50.0% | |
| !! | TCCTAGCTTCACGTCGGTTT+CGG | + | chr4_4:74136453-74136472 | Msa0702500:intron | 50.0% |
| TGGCCAATGGCACATTAGTG+AGG | + | chr4_4:74136615-74136634 | Msa0702500:CDS | 50.0% | |
| GGCCAATGGCACATTAGTGA+GGG | + | chr4_4:74136616-74136635 | Msa0702500:CDS | 50.0% | |
| !! | GGCTTTGAAGTCCCCACTTA+TGG | + | chr4_4:74136861-74136880 | Msa0702500:CDS | 50.0% |
| CTCTTCACAGTGTCTAGTGC+TGG | - | chr4_4:74137575-74137594 | None:intergenic | 50.0% | |
| TGGTTTAGGAGAGCTTCCTC+AGG | + | chr4_4:74137797-74137816 | Msa0702500:CDS | 50.0% | |
| GATGTAGACAGGGATACCTG+AGG | - | chr4_4:74137816-74137835 | None:intergenic | 50.0% | |
| !! | GAGATAGAGCGGACGGATTA+CGG | - | chr4_4:74137846-74137865 | None:intergenic | 50.0% |
| TCAACAGGAGATAGAGCGGA+CGG | - | chr4_4:74137853-74137872 | None:intergenic | 50.0% | |
| TGTGTTGCCAAAGGGTGGAA+AGG | - | chr4_4:74138447-74138466 | None:intergenic | 50.0% | |
| CCGTTCATGGATGTGTGGAA+AGG | - | chr4_4:74138518-74138537 | None:intergenic | 50.0% | |
| GTTATTGGCGTCACGTCTGA+AGG | + | chr4_4:74139177-74139196 | Msa0702500:CDS | 50.0% | |
| TATTGGCGTCACGTCTGAAG+GGG | + | chr4_4:74139179-74139198 | Msa0702500:CDS | 50.0% | |
| !! | ACAGGTGAGGAAGGTTGGTA+AGG | + | chr4_4:74139510-74139529 | Msa0702500:intron | 50.0% |
| !! | GGAAGGTTGGTAAGGTTGCA+AGG | + | chr4_4:74139518-74139537 | Msa0702500:CDS | 50.0% |
| !! | ATTGGGAGTCGTTGGTGTTG+GGG | - | chr4_4:74139570-74139589 | None:intergenic | 50.0% |
| ! | GATTGGGAGTCGTTGGTGTT+GGG | - | chr4_4:74139571-74139590 | None:intergenic | 50.0% |
| CAACACCAACGACTCCCAAT+CGG | + | chr4_4:74139570-74139589 | Msa0702500:CDS | 50.0% | |
| !!! | TTCGGCCCAGTTGCTTTTGT+GGG | - | chr4_4:74139609-74139628 | None:intergenic | 50.0% |
| !!! | TTTCGGCCCAGTTGCTTTTG+TGG | - | chr4_4:74139610-74139629 | None:intergenic | 50.0% |
| TCGATCCATAACAGCCGACA+AGG | + | chr4_4:74139782-74139801 | Msa0702500:intron | 50.0% | |
| ! | TCACTCCTTGTCGGCTGTTA+TGG | - | chr4_4:74139790-74139809 | None:intergenic | 50.0% |
| !! | GGGAGTATCTCACTCCTTGT+CGG | - | chr4_4:74139799-74139818 | None:intergenic | 50.0% |
| TTCGAGAAAGGATAGTGCGG+GGG | - | chr4_4:74141018-74141037 | None:intergenic | 50.0% | |
| CTTCGAGAAAGGATAGTGCG+GGG | - | chr4_4:74141019-74141038 | None:intergenic | 50.0% | |
| CCTTCGAGAAAGGATAGTGC+GGG | - | chr4_4:74141020-74141039 | None:intergenic | 50.0% | |
| GGCCTTACATCCTTCGAGAA+AGG | - | chr4_4:74141030-74141049 | None:intergenic | 50.0% | |
| ACAGGCCATGTTTCCCAGTA+TGG | + | chr4_4:74141109-74141128 | Msa0702500:intron | 50.0% | |
| GGGGCTGTTATAGTGGTTAC+TGG | + | chr4_4:74141311-74141330 | Msa0702500:intron | 50.0% | |
| GGTCCTAGAAGGTCAATTCC+AGG | - | chr4_4:74141927-74141946 | None:intergenic | 50.0% | |
| ! | TCTAGGGTGGGTTCATTGAC+TGG | - | chr4_4:74141990-74142009 | None:intergenic | 50.0% |
| TTCCTGACACACCAGCTGTA+TGG | + | chr4_4:74142365-74142384 | Msa0702500:intron | 50.0% | |
| CCAGGTTTCTCGTACATCCA+TGG | - | chr4_4:74142610-74142629 | None:intergenic | 50.0% | |
| CCATGGATGTACGAGAAACC+TGG | + | chr4_4:74142607-74142626 | Msa0702500:intron | 50.0% | |
| GATGTACGAGAAACCTGGTC+TGG | + | chr4_4:74142612-74142631 | Msa0702500:intron | 50.0% | |
| !! | ACAGGTTCTAGACCTCACTG+TGG | + | chr4_4:74142745-74142764 | Msa0702500:intron | 50.0% |
| ! | TTACTCTTCTGCAGCACTGG+CGG | - | chr4_4:74142780-74142799 | None:intergenic | 50.0% |
| ATTACGCACAAGCGAGCATC+TGG | - | chr4_4:74142980-74142999 | None:intergenic | 50.0% | |
| ! | GTCTTGCTAACTTGTGCTCC+TGG | + | chr4_4:74143193-74143212 | Msa0702500:three_prime_UTR | 50.0% |
| CGCAGTCGAAAGGGGGTTTA+GGG | - | chr4_4:74135819-74135838 | None:intergenic | 55.0% | |
| TCGCAGTCGAAAGGGGGTTT+AGG | - | chr4_4:74135820-74135839 | None:intergenic | 55.0% | |
| TCGGAGATCGCAGTCGAAAG+GGG | - | chr4_4:74135827-74135846 | None:intergenic | 55.0% | |
| GATCGGAGATCGCAGTCGAA+AGG | - | chr4_4:74135829-74135848 | None:intergenic | 55.0% | |
| CTGCGATCTCCGATCGAAGA+TGG | + | chr4_4:74135834-74135853 | Msa0702500:exon | 55.0% | |
| AGTGGTCTTCTCTCCGTCGA+TGG | + | chr4_4:74135910-74135929 | Msa0702500:CDS | 55.0% | |
| TCCGAAACCGACGTGAAGCT+AGG | - | chr4_4:74136457-74136476 | None:intergenic | 55.0% | |
| !! | TAGCTTCACGTCGGTTTCGG+AGG | + | chr4_4:74136456-74136475 | Msa0702500:intron | 55.0% |
| GCACGGCTTAGCGCTGTTTA+TGG | + | chr4_4:74137943-74137962 | Msa0702500:CDS | 55.0% | |
| CGGCTTAGCGCTGTTTATGG+AGG | + | chr4_4:74137946-74137965 | Msa0702500:CDS | 55.0% | |
| GGCTAGGGAAAGAAAGGCTG+TGG | + | chr4_4:74138413-74138432 | Msa0702500:intron | 55.0% | |
| !! | GAGTCGTTGGTGTTGGGGAT+CGG | - | chr4_4:74139565-74139584 | None:intergenic | 55.0% |
| CGATTGGGAGTCGTTGGTGT+TGG | - | chr4_4:74139572-74139591 | None:intergenic | 55.0% | |
| !! | TTGCACCGATTGGGAGTCGT+TGG | - | chr4_4:74139578-74139597 | None:intergenic | 55.0% |
| GGCTCCAAATAGCCATCGGT+TGG | - | chr4_4:74140599-74140618 | None:intergenic | 55.0% | |
| ACCAGGGGTTTGACAGGAGA+GGG | - | chr4_4:74140825-74140844 | None:intergenic | 55.0% | |
| AACAGCACCAGGGGTTTGAC+AGG | - | chr4_4:74140831-74140850 | None:intergenic | 55.0% | |
| TCGAGAAAGGATAGTGCGGG+GGG | - | chr4_4:74141017-74141036 | None:intergenic | 55.0% | |
| CCCGCACTATCCTTTCTCGA+AGG | + | chr4_4:74141017-74141036 | Msa0702500:intron | 55.0% | |
| CAGCCCCGGTTCTCAAAAAC+AGG | - | chr4_4:74141298-74141317 | None:intergenic | 55.0% | |
| GAGAACCGGGGCTGTTATAG+TGG | + | chr4_4:74141304-74141323 | Msa0702500:intron | 55.0% | |
| AGCCATACAGCTGGTGTGTC+AGG | - | chr4_4:74142370-74142389 | None:intergenic | 55.0% | |
| AGAAACCTGGTCTGGCCCTT+TGG | + | chr4_4:74142620-74142639 | Msa0702500:intron | 55.0% | |
| TCTGGCCCTTTGGCTAAGCA+TGG | + | chr4_4:74142630-74142649 | Msa0702500:intron | 55.0% | |
| CGGAGATCGCAGTCGAAAGG+GGG | - | chr4_4:74135826-74135845 | None:intergenic | 60.0% | |
| GGGGATCGGATGGCTCATGA+TGG | - | chr4_4:74139551-74139570 | None:intergenic | 60.0% | |
| !! | CGTTGGTGTTGGGGATCGGA+TGG | - | chr4_4:74139561-74139580 | None:intergenic | 60.0% |
| GGGTTTGACAGGAGAGGGAG+AGG | - | chr4_4:74140820-74140839 | None:intergenic | 60.0% | |
| TCCCTCTCCTGTCAAACCCC+TGG | + | chr4_4:74140821-74140840 | Msa0702500:intron | 60.0% | |
| CACCAGGGGTTTGACAGGAG+AGG | - | chr4_4:74140826-74140845 | None:intergenic | 60.0% | |
| CGAGAAAGGATAGTGCGGGG+GGG | - | chr4_4:74141016-74141035 | None:intergenic | 60.0% | |
| CTTAGCCAAAGGGCCAGACC+AGG | - | chr4_4:74142628-74142647 | None:intergenic | 60.0% | |
| ! | CGGCACTGAGATCCACAGTG+AGG | - | chr4_4:74142760-74142779 | None:intergenic | 60.0% |
| GCACAAGCGAGCATCTGGAG+GGG | - | chr4_4:74142975-74142994 | None:intergenic | 60.0% | |
| CGCACAAGCGAGCATCTGGA+GGG | - | chr4_4:74142976-74142995 | None:intergenic | 60.0% | |
| ACGCACAAGCGAGCATCTGG+AGG | - | chr4_4:74142977-74142996 | None:intergenic | 60.0% | |
| GAAAGGATAGTGCGGGGGGG+TGG | - | chr4_4:74141013-74141032 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 74135657 | 74143260 | 74135657 | ID=Msa0702500;Name=Msa0702500 |
| chr4_4 | mRNA | 74135657 | 74143260 | 74135657 | ID=Msa0702500-mRNA-1;Parent=Msa0702500;Name=Msa0702500-mRNA-1;_AED=0.07;_eAED=0.07;_QI=196|0.90|1|1|1|1|12|461|416 |
| chr4_4 | exon | 74135657 | 74135939 | 74135657 | ID=Msa0702500-mRNA-1:exon:22960;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74136030 | 74136092 | 74136030 | ID=Msa0702500-mRNA-1:exon:22961;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74136608 | 74136715 | 74136608 | ID=Msa0702500-mRNA-1:exon:22962;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74136832 | 74137004 | 74136832 | ID=Msa0702500-mRNA-1:exon:22963;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74137490 | 74137601 | 74137490 | ID=Msa0702500-mRNA-1:exon:22964;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74137738 | 74137818 | 74137738 | ID=Msa0702500-mRNA-1:exon:22965;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74137937 | 74137999 | 74137937 | ID=Msa0702500-mRNA-1:exon:22966;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74139153 | 74139254 | 74139153 | ID=Msa0702500-mRNA-1:exon:22967;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74139514 | 74139638 | 74139514 | ID=Msa0702500-mRNA-1:exon:22968;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74141818 | 74142028 | 74141818 | ID=Msa0702500-mRNA-1:exon:22969;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74142106 | 74142180 | 74142106 | ID=Msa0702500-mRNA-1:exon:22970;Parent=Msa0702500-mRNA-1 |
| chr4_4 | exon | 74142749 | 74143260 | 74142749 | ID=Msa0702500-mRNA-1:exon:22971;Parent=Msa0702500-mRNA-1 |
| chr4_4 | five_prime_UTR | 74135657 | 74135852 | 74135657 | ID=Msa0702500-mRNA-1:five_prime_utr;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74135853 | 74135939 | 74135853 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74136030 | 74136092 | 74136030 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74136608 | 74136715 | 74136608 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74136832 | 74137004 | 74136832 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74137490 | 74137601 | 74137490 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74137738 | 74137818 | 74137738 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74137937 | 74137999 | 74137937 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74139153 | 74139254 | 74139153 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74139514 | 74139638 | 74139514 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74141818 | 74142028 | 74141818 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74142106 | 74142180 | 74142106 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | CDS | 74142749 | 74142799 | 74142749 | ID=Msa0702500-mRNA-1:cds;Parent=Msa0702500-mRNA-1 |
| chr4_4 | three_prime_UTR | 74142800 | 74143260 | 74142800 | ID=Msa0702500-mRNA-1:three_prime_utr;Parent=Msa0702500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
