AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1034690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1034690 MtrunA17_Chr7g0257731 90.775 271 20 2 116 386 349 614 2.51e-176 504
Msa1034690 MtrunA17_Chr1g0173521 67.778 270 62 1 116 385 552 796 3.50e-125 379
Msa1034690 MtrunA17_Chr5g0447201 47.970 271 116 1 116 386 515 760 1.62e-78 256
Msa1034690 MtrunA17_Chr4g0064311 45.620 274 118 5 116 386 590 835 3.49e-70 235
Msa1034690 MtrunA17_Chr3g0116641 43.825 251 117 2 115 365 507 733 1.16e-60 208
Msa1034690 MtrunA17_Chr5g0427081 60.417 144 57 0 119 262 8 151 3.20e-59 189
Msa1034690 MtrunA17_Chr4g0058701 35.039 254 134 4 123 373 541 766 3.69e-43 160
Msa1034690 MtrunA17_Chr3g0117141 36.250 240 124 4 123 359 549 762 7.44e-42 156
Msa1034690 MtrunA17_Chr6g0449521 32.950 261 142 5 123 380 550 780 8.64e-39 147
Msa1034690 MtrunA17_Chr7g0267991 34.677 248 129 3 123 366 622 840 4.93e-37 142
Msa1034690 MtrunA17_Chr7g0270181 32.800 250 131 4 123 366 127 345 3.28e-34 130
Msa1034690 MtrunA17_Chr8g0380141 46.392 97 52 0 123 219 613 709 1.98e-20 93.2
Msa1034690 MtrunA17_Chr1g0201161 28.641 206 109 5 176 375 739 912 7.27e-18 85.9
Msa1034690 MtrunA17_Chr1g0201161 50.000 58 29 0 123 180 617 674 1.88e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1034690 AT3G57520.1 59.807 311 106 4 78 386 480 773 3.21e-128 387
Msa1034690 AT3G57520.2 62.694 193 54 3 78 268 480 656 6.01e-78 253
Msa1034690 AT1G55740.1 46.691 272 120 3 115 385 507 754 1.08e-77 254
Msa1034690 AT5G20250.3 44.944 267 118 4 123 386 509 749 4.46e-70 234
Msa1034690 AT5G20250.1 44.944 267 118 4 123 386 509 749 4.46e-70 234
Msa1034690 AT5G20250.2 44.944 267 118 4 123 386 509 749 4.46e-70 234
Msa1034690 AT5G20250.4 44.944 267 118 4 123 386 604 844 9.57e-70 235
Msa1034690 AT4G01970.2 33.591 259 139 5 123 375 681 912 3.39e-41 155
Msa1034690 AT4G01970.1 33.591 259 139 5 123 375 634 865 4.80e-41 154
Msa1034690 AT5G40390.1 32.692 260 136 5 123 376 548 774 1.40e-37 144
Msa1034690 AT3G57520.3 50.000 86 25 3 78 161 480 549 6.90e-17 82.8

Find 252 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGACTATAACTCAGAAAA+TGG 0.147078 7_1:-70246294 Msa1034690:CDS
AGCTGAGAGATTGGGAAAAT+TGG 0.176611 7_1:-70246119 Msa1034690:three_prime_UTR
CAGCTCCACCCCACAAATTT+TGG 0.194389 7_1:+70249715 None:intergenic
CACTGTCTTGCTTCCTCTAT+TGG 0.218826 7_1:-70249903 Msa1034690:five_prime_UTR
GTGAGAGGAAGTGGCAAGTT+TGG 0.230018 7_1:-70246372 Msa1034690:CDS
TCCAGAACCTTTAGTGTTAC+TGG 0.237610 7_1:+70246718 None:intergenic
TAGAAGTTGAAAACCTTCTT+TGG 0.248800 7_1:+70247968 None:intergenic
TAGCTGTACCTGACATAAAT+TGG 0.255466 7_1:+70247438 None:intergenic
TACTATGTTGACAGGGATTA+AGG 0.255952 7_1:-70248390 Msa1034690:five_prime_UTR
CTCTCAATAATTACCTCTTC+AGG 0.263798 7_1:+70248781 None:intergenic
AGAAGTGGAGAAATGTAAAT+TGG 0.264085 7_1:+70251400 None:intergenic
TGTATGCAACAGACGAAATA+TGG 0.276352 7_1:+70247666 None:intergenic
GGTAATAACTACTACACTTT+TGG 0.284207 7_1:-70246150 Msa1034690:three_prime_UTR
ATTGTTTGAAATGTTGAAAC+AGG 0.314649 7_1:-70245785 Msa1034690:three_prime_UTR
GGCATGCACTAGCTGGTTAT+TGG 0.322078 7_1:-70248132 Msa1034690:five_prime_UTR
CTTGCTACTGGTGCATTCAT+TGG 0.327320 7_1:-70250464 Msa1034690:five_prime_UTR
TCCGGTTCATGTGTTGCTTC+CGG 0.327355 7_1:-70250051 Msa1034690:five_prime_UTR
GTTTGTTGTCGGAGGCTCTA+TGG 0.328560 7_1:+70246481 None:intergenic
GCATGCACTAGCTGGTTATT+GGG 0.328605 7_1:-70248131 Msa1034690:five_prime_UTR
GCAAATGGAGTTTATAGCTT+TGG 0.334793 7_1:-70249684 Msa1034690:five_prime_UTR
TACATGTCCTCTTGAGGAAC+TGG 0.342287 7_1:+70246252 None:intergenic
CTCAAGAGGACATGTATAAA+TGG 0.343824 7_1:-70246245 Msa1034690:CDS
TATCCCAATCAAACTCCTTT+TGG 0.345272 7_1:-70249641 Msa1034690:five_prime_UTR
TCCAGTAACACTAAAGGTTC+TGG 0.349503 7_1:-70246719 Msa1034690:CDS
TTAGCTTCATGTGGAGTAGA+TGG 0.351053 7_1:-70247926 Msa1034690:five_prime_UTR
GAGTCGCGCGTAGGCCTTCC+AGG 0.352046 7_1:+70247244 None:intergenic
CATACCAAAAGGAGTTTGAT+TGG 0.358416 7_1:+70249637 None:intergenic
ATTGTTTATGCTTACAGATC+AGG 0.359368 7_1:-70246894 Msa1034690:intron
GTTTGAAATATTGTTGAGAT+TGG 0.372036 7_1:-70245888 Msa1034690:three_prime_UTR
CTGTTAAATTCAGTTCCTTC+CGG 0.372458 7_1:-70249742 Msa1034690:intron
TTCTGGGACACCTTTCAGTA+TGG 0.381592 7_1:+70250520 None:intergenic
ATTTGATGGTGAGGTTGTTT+CGG 0.382497 7_1:-70246451 Msa1034690:CDS
TTCCGGTCTGCCAAAATTTG+TGG 0.382741 7_1:-70249725 Msa1034690:five_prime_UTR
GTCAGAAAAGTTACGAGAAA+TGG 0.386052 7_1:+70247805 None:intergenic
GTTATAGTCGAAATCGGTTT+CGG 0.390950 7_1:+70246305 None:intergenic
AACCTGGTCCTATCTCTTGC+CGG 0.393609 7_1:+70247208 None:intergenic
GTTGTGCTGACTCCAGATTC+TGG 0.395496 7_1:-70250494 Msa1034690:five_prime_UTR
GCAAGACCATTACCAGAATC+TGG 0.395635 7_1:+70250482 None:intergenic
TTACTTGGATTGGACAGAAA+TGG 0.398060 7_1:+70246683 None:intergenic
CAATAGTTGCGGTTGTCGTT+CGG 0.399135 7_1:+70246403 None:intergenic
GTATTCAACTGCCAAGGTGC+TGG 0.400229 7_1:-70247044 Msa1034690:CDS
CATGCCGCAGCTCGCGCAAT+CGG 0.407273 7_1:-70247468 Msa1034690:CDS
CAAAGATAGTGAAGGGGAAG+GGG 0.407874 7_1:-70249945 Msa1034690:five_prime_UTR
CTTGCTAATTACAGGTTCCT+TGG 0.408729 7_1:+70245831 None:intergenic
TTCTGAGTTATAGTCGAAAT+CGG 0.409621 7_1:+70246299 None:intergenic
AGCTTGTCTGTACATGGCCT+TGG 0.409675 7_1:-70248001 Msa1034690:five_prime_UTR
TCCGGTCTGCCAAAATTTGT+GGG 0.410177 7_1:-70249724 Msa1034690:five_prime_UTR
CTTTGGAGAAAATATGTATA+AGG 0.410582 7_1:-70249667 Msa1034690:five_prime_UTR
CTCCGTTGACAATGGAAACT+TGG 0.412220 7_1:-70250558 Msa1034690:five_prime_UTR
GTTGCGGTTGTCGTTCGGTT+GGG 0.413453 7_1:+70246408 None:intergenic
AACAAACAAGAGCTATTTGA+TGG 0.419926 7_1:-70246465 Msa1034690:CDS
CCGCTGAAGTGTGCGGTAGA+TGG 0.424658 7_1:-70246330 Msa1034690:CDS
AAACCAACCCGACATTGTTA+TGG 0.425097 7_1:-70248026 Msa1034690:five_prime_UTR
GTACCATGTAGCTGAGAGAT+TGG 0.427467 7_1:-70246128 Msa1034690:three_prime_UTR
CTGTGTTGAACATGTCCATC+AGG 0.430121 7_1:+70246529 None:intergenic
AAATAGCTCTTGTTTGTTGT+CGG 0.430180 7_1:+70246470 None:intergenic
TGTTCCATGCCAGTCGCTGC+TGG 0.432967 7_1:+70248097 None:intergenic
GAGAGTTTATGCAGCCAGAT+TGG 0.433623 7_1:-70247628 Msa1034690:CDS
TTGTTGATCCGGCAAGAGAT+AGG 0.436763 7_1:-70247216 Msa1034690:CDS
GGTATATCATTTGCAGCAAT+AGG 0.437403 7_1:-70246552 Msa1034690:CDS
AGAGTTTATGCAGCCAGATT+GGG 0.441087 7_1:-70247627 Msa1034690:CDS
GTTGCTTCCGGTTCAAGTTA+TGG 0.442102 7_1:-70250039 Msa1034690:five_prime_UTR
ACTGGAATCGAAGCCCCTTT+CGG 0.442762 7_1:+70246736 None:intergenic
GCAAAGATAGTGAAGGGGAA+GGG 0.444337 7_1:-70249946 Msa1034690:five_prime_UTR
GCCATTCAGCACCAGCTACT+TGG 0.446935 7_1:+70246928 None:intergenic
ACATGGAACATGTCCCAATC+TGG 0.449730 7_1:+70247614 None:intergenic
ACCGGAAGCAACACATGAAC+CGG 0.451788 7_1:+70250050 None:intergenic
TCTGGTAATGGTCTTGCTAC+TGG 0.451944 7_1:-70250476 Msa1034690:five_prime_UTR
CTAGAAGTGAAGTACATTCC+AGG 0.452710 7_1:+70251491 None:intergenic
AGGAAGTTGGTTCTTCCTGA+TGG 0.453207 7_1:-70247289 Msa1034690:CDS
ATATGGATGGTGTGGGAAGC+GGG 0.455526 7_1:+70247683 None:intergenic
GTTCTCCGTGCTCAATTACC+TGG 0.455559 7_1:-70247262 Msa1034690:CDS
TTGTGATGTCTTACTTGGAT+TGG 0.455784 7_1:+70246673 None:intergenic
ACATGTTTGGTTGGTGCACA+TGG 0.458709 7_1:-70248848 Msa1034690:five_prime_UTR
AGGTTTGCTACTATGTTGAC+AGG 0.461841 7_1:-70248398 Msa1034690:five_prime_UTR
GCTGAGAGATTGGGAAAATT+GGG 0.464220 7_1:-70246118 Msa1034690:three_prime_UTR
CGGAATGGACCTTCCAATAG+AGG 0.466223 7_1:+70249890 None:intergenic
AAATGTCTTACTTGACGGCT+TGG 0.467405 7_1:+70249519 None:intergenic
AGTTGCGGTTGTCGTTCGGT+TGG 0.469224 7_1:+70246407 None:intergenic
TAAGCAGACTGCTGTTGTGC+GGG 0.471205 7_1:-70247732 Msa1034690:CDS
GCTTGGTTGATGACTTCAAA+AGG 0.471651 7_1:+70249536 None:intergenic
TCATCCACCATAACTTGAAC+CGG 0.473225 7_1:+70250032 None:intergenic
AGCAAAGATAGTGAAGGGGA+AGG 0.474157 7_1:-70249947 Msa1034690:five_prime_UTR
TTGAGGAACTGGGATGTAGA+AGG 0.475841 7_1:+70246263 None:intergenic
GGAGTGAAGCCAGCAGCGAC+TGG 0.476052 7_1:-70248106 Msa1034690:five_prime_UTR
GGAGCTGTCATTAATGCAAA+TGG 0.476920 7_1:-70249699 Msa1034690:five_prime_UTR
TCGACTATAACTCAGAAAAT+GGG 0.478523 7_1:-70246293 Msa1034690:CDS
ATTATTGAAACCCTTGGCGC+TGG 0.481937 7_1:-70247881 Msa1034690:CDS
GCCAGCCGTCATCTATGATA+AGG 0.482851 7_1:+70248624 None:intergenic
GGTATTTATTGAAATGTGTA+GGG 0.483772 7_1:-70246186 Msa1034690:three_prime_UTR
GTTTGATCTATTAAGGGCTG+TGG 0.485390 7_1:-70249029 Msa1034690:intron
AAATTTCAAAAGAGTAAGAA+TGG 0.489716 7_1:-70248359 Msa1034690:five_prime_UTR
ATAGAAGAAGCATTCCCTCC+TGG 0.489815 7_1:-70251509 Msa1034690:five_prime_UTR
CCAAACATGTCAAGAAAAGA+TGG 0.490392 7_1:+70248861 None:intergenic
CTGACTCCAGATTCTGGTAA+TGG 0.492309 7_1:-70250488 Msa1034690:five_prime_UTR
AGAAGGCGGCGCTTGATACA+AGG 0.492725 7_1:+70251088 None:intergenic
GCCGCAGCTCGCGCAATCGG+TGG 0.492913 7_1:-70247465 Msa1034690:CDS
GTGGTTGTCCAATTTATGTC+AGG 0.493704 7_1:-70247446 Msa1034690:intron
CAAAACATTATTGAAACCCT+TGG 0.493780 7_1:-70247887 Msa1034690:CDS
GCGGCATGATACTCTGCTGC+CGG 0.499718 7_1:+70247483 None:intergenic
ATACCAAAAGGAGTTTGATT+GGG 0.499728 7_1:+70249638 None:intergenic
CGCATCCATGATACATCTCC+CGG 0.500427 7_1:-70246996 Msa1034690:CDS
GTCTTGCTTCCTCTATTGGA+AGG 0.500955 7_1:-70249899 Msa1034690:five_prime_UTR
GCTTTGAAAGTGAGAGGAAG+TGG 0.501703 7_1:-70246381 Msa1034690:CDS
AATATGGATGGTGTGGGAAG+CGG 0.504563 7_1:+70247682 None:intergenic
ATGGTGGATGACACAGAGAA+TGG 0.505089 7_1:-70250020 Msa1034690:five_prime_UTR
GCCACCATGTCCAGCGCCAA+GGG 0.505764 7_1:+70247871 None:intergenic
AGGCGATTCGATTACCGAAA+GGG 0.505972 7_1:-70246750 Msa1034690:CDS
TTCCCAATCTCTCAGCTACA+TGG 0.506398 7_1:+70246125 None:intergenic
GTTGATGACTTCAAAAGGAT+TGG 0.506485 7_1:+70249541 None:intergenic
GGTTGGTTTCCTAGTACTCC+CGG 0.507014 7_1:+70248040 None:intergenic
AAACCAAATCACATACCAAA+AGG 0.508434 7_1:+70249626 None:intergenic
AAGCTGTCCATAACAATGTC+GGG 0.510231 7_1:+70248019 None:intergenic
GAGCACAACGAACCGACATC+AGG 0.510486 7_1:-70248335 Msa1034690:five_prime_UTR
CGACTCACTCTTTGTTGATC+CGG 0.510909 7_1:-70247227 Msa1034690:CDS
TGGACAGAAATGTTTATGTA+TGG 0.510917 7_1:-70248153 Msa1034690:intron
AACAGAACATACTACATCCA+TGG 0.510943 7_1:+70246011 None:intergenic
GATCTCATCAACCAAGTAGC+TGG 0.511507 7_1:-70246939 Msa1034690:CDS
TTCGATTCCAGTAACACTAA+AGG 0.512811 7_1:-70246725 Msa1034690:CDS
TGGAACATGAACAAATGTAC+TGG 0.515027 7_1:-70247077 Msa1034690:CDS
GTTTGTAGCTTAGAGAGAAG+TGG 0.515110 7_1:+70251385 None:intergenic
TACCATGTAGCTGAGAGATT+GGG 0.515215 7_1:-70246127 Msa1034690:three_prime_UTR
GTGACTTCAGAGTCTACATC+CGG 0.516712 7_1:-70247502 Msa1034690:intron
TCCTTATCATAGATGACGGC+TGG 0.519332 7_1:-70248625 Msa1034690:five_prime_UTR
TATTCAACTGCCAAGGTGCT+GGG 0.522008 7_1:-70247043 Msa1034690:CDS
CACATGGTTTACATGCATGC+TGG 0.523137 7_1:-70249566 Msa1034690:five_prime_UTR
TGGTCTAGTACATCCAAAGA+AGG 0.525051 7_1:-70247981 Msa1034690:five_prime_UTR
ACCAAGTAGCTGGTGCTGAA+TGG 0.525470 7_1:-70246929 Msa1034690:CDS
ATCCGGCAAGAGATAGGACC+AGG 0.526010 7_1:-70247210 Msa1034690:intron
GTGTGGGAAGCGGGATCACG+CGG 0.527327 7_1:+70247692 None:intergenic
AACAAATGTACTGGAGTTGT+TGG 0.527809 7_1:-70247068 Msa1034690:CDS
GCATATCCAGTGCAGTCGCC+GGG 0.528579 7_1:-70248058 Msa1034690:five_prime_UTR
CATGCTTACTTAGCTTCATG+TGG 0.529132 7_1:-70247935 Msa1034690:five_prime_UTR
TTGTGGAAAGGATATACCTC+TGG 0.530688 7_1:-70249993 Msa1034690:five_prime_UTR
AGTACTCCCGGCGACTGCAC+TGG 0.532071 7_1:+70248052 None:intergenic
TGGTATTTATTGAAATGTGT+AGG 0.533655 7_1:-70246187 Msa1034690:three_prime_UTR
CCATTCCGATCTGTTCTACA+AGG 0.533937 7_1:-70249875 Msa1034690:five_prime_UTR
TCCTAAGAAGGTCAAAATTG+TGG 0.534153 7_1:+70247308 None:intergenic
TAGAGAGCAAAGATAGTGAA+GGG 0.534868 7_1:-70249952 Msa1034690:five_prime_UTR
ATTCAACAGGAAATAGCGCC+TGG 0.535247 7_1:-70246573 Msa1034690:intron
TCTCTAAGCTACAAACGTTA+CGG 0.536355 7_1:-70251378 Msa1034690:intron
TATGTATGGCATGCACTAGC+TGG 0.537814 7_1:-70248139 Msa1034690:five_prime_UTR
ACTTACTCTAGGATACCAAT+GGG 0.539184 7_1:+70250404 None:intergenic
AATATGTTATTTGTATGCCA+AGG 0.539497 7_1:-70245848 Msa1034690:three_prime_UTR
GTGTACCGGGAGATGTATCA+TGG 0.539582 7_1:+70246991 None:intergenic
GAAGAACCAACTTCCTAAGA+AGG 0.539968 7_1:+70247296 None:intergenic
ATGGACAGCTTGTCTGTACA+TGG 0.544086 7_1:-70248007 Msa1034690:five_prime_UTR
TTGCAAATTATGTCATGTGT+TGG 0.546197 7_1:-70246056 Msa1034690:three_prime_UTR
CTAAGCAGACTGCTGTTGTG+CGG 0.547653 7_1:-70247733 Msa1034690:CDS
ATTTGCAGCAATAGGCCTGA+TGG 0.548013 7_1:-70246544 Msa1034690:CDS
GGCCACCATGTCCAGCGCCA+AGG 0.548659 7_1:+70247870 None:intergenic
CCTTCTTGTACAACACAGTC+AGG 0.549051 7_1:+70248575 None:intergenic
AACAGAGCTAGTAAGTGTAC+CGG 0.549673 7_1:+70246977 None:intergenic
CATGCACTAGCTGGTTATTG+GGG 0.552163 7_1:-70248130 Msa1034690:five_prime_UTR
GCACTAGCTGGTTATTGGGG+TGG 0.553173 7_1:-70248127 Msa1034690:five_prime_UTR
TGGTGGATGACACAGAGAAT+GGG 0.553636 7_1:-70250019 Msa1034690:five_prime_UTR
CATGCTGTTGAGACAAATCA+AGG 0.554075 7_1:-70249593 Msa1034690:five_prime_UTR
GAAACCCTTGGCGCTGGACA+TGG 0.554658 7_1:-70247875 Msa1034690:CDS
CAGACGAAATATGGATGGTG+TGG 0.555142 7_1:+70247675 None:intergenic
TAGCTCTTGTTTGTTGTCGG+AGG 0.555302 7_1:+70246473 None:intergenic
TCTAATATCTCCGTTGACAA+TGG 0.555379 7_1:-70250566 Msa1034690:five_prime_UTR
GGACTGATGTTCTTCTCCCA+TGG 0.559377 7_1:-70246028 Msa1034690:three_prime_UTR
GTCTGCCAAAATTTGTGGGG+TGG 0.562099 7_1:-70249720 Msa1034690:five_prime_UTR
AGCAAGACAGTGTAGACGAT+GGG 0.562425 7_1:+70249914 None:intergenic
CATTTATACATGTCCTCTTG+AGG 0.565403 7_1:+70246246 None:intergenic
GGAACATTACGACACTGCCT+TGG 0.566219 7_1:-70248080 Msa1034690:five_prime_UTR
CATTGCCTTGTAGAACAGAT+CGG 0.567534 7_1:+70249870 None:intergenic
CACATGAAGCTAAGTAAGCA+TGG 0.569172 7_1:+70247936 None:intergenic
CATGTTTGGTTGGTGCACAT+GGG 0.569269 7_1:-70248847 Msa1034690:five_prime_UTR
CCTTGCACCACCCAGCACCT+TGG 0.570082 7_1:+70247033 None:intergenic
CAGCTATCATCATGCACTTG+AGG 0.572105 7_1:-70247831 Msa1034690:CDS
CACAGGAGGAGCTGTAGAAG+AGG 0.573007 7_1:-70246511 Msa1034690:CDS
GCACGGAGAACAGAACCATC+AGG 0.573266 7_1:+70247274 None:intergenic
ATCGAGATCTGCTTCGAGAG+TGG 0.579146 7_1:-70249836 Msa1034690:intron
CAAGCTGTCCATAACAATGT+CGG 0.579341 7_1:+70248018 None:intergenic
ACAAGAGCTATTTGATGGTG+AGG 0.579627 7_1:-70246460 Msa1034690:CDS
GAAGCCAGCAGCGACTGGCA+TGG 0.580287 7_1:-70248101 Msa1034690:five_prime_UTR
ACACAGAGAATGGGAACTTG+TGG 0.585275 7_1:-70250010 Msa1034690:five_prime_UTR
TCCGTGCTCAATTACCTGGA+AGG 0.585493 7_1:-70247258 Msa1034690:CDS
CCAAGGTGCTGGGTGGTGCA+AGG 0.585557 7_1:-70247033 Msa1034690:CDS
CTACATCCCAGTTCCTCAAG+AGG 0.585688 7_1:-70246259 Msa1034690:CDS
TATACTGACGTAACAGCTGA+AGG 0.586199 7_1:-70248816 Msa1034690:five_prime_UTR
ATAGAGAGCAAAGATAGTGA+AGG 0.587130 7_1:-70249953 Msa1034690:five_prime_UTR
ATGTGGAGTAGATGGAGTGA+AGG 0.587223 7_1:-70247918 Msa1034690:five_prime_UTR
AACTTACTCTAGGATACCAA+TGG 0.587431 7_1:+70250403 None:intergenic
GGCGATTCGATTACCGAAAG+GGG 0.589332 7_1:-70246749 Msa1034690:CDS
TGGAGAAAATATGTATAAGG+TGG 0.590145 7_1:-70249664 Msa1034690:five_prime_UTR
ACCACCGATTGCGCGAGCTG+CGG 0.590946 7_1:+70247464 None:intergenic
ACTATTGCTTTGAAAGTGAG+AGG 0.591713 7_1:-70246387 Msa1034690:CDS
ACAGATTGAAACTAAAGCAA+AGG 0.591790 7_1:-70248600 Msa1034690:five_prime_UTR
AACCAAGTTTCCATTGTCAA+CGG 0.591988 7_1:+70250556 None:intergenic
CGTAACAGCTGAAGGTGTTG+AGG 0.592074 7_1:-70248808 Msa1034690:five_prime_UTR
ACAGAACATACTACATCCAT+GGG 0.593484 7_1:+70246012 None:intergenic
CTGGCTGCATAAACTCTCCA+AGG 0.593964 7_1:+70247633 None:intergenic
TGTATGTGTCATAACACTGA+TGG 0.596890 7_1:-70247767 Msa1034690:CDS
CACTTTCAAAGCAATAGTTG+CGG 0.598073 7_1:+70246392 None:intergenic
CCTGACTGTGTTGTACAAGA+AGG 0.599674 7_1:-70248575 Msa1034690:five_prime_UTR
AAGCAAGACAGTGTAGACGA+TGG 0.601592 7_1:+70249913 None:intergenic
CGACTGCACTGGATATGCCA+AGG 0.601724 7_1:+70248063 None:intergenic
AATGGAAACTTGGTTGTCCA+TGG 0.602249 7_1:-70250548 Msa1034690:five_prime_UTR
GCCTTCCAGGTAATTGAGCA+CGG 0.603174 7_1:+70247257 None:intergenic
TTATGTCATGTGTTGGAGAG+AGG 0.603992 7_1:-70246049 Msa1034690:three_prime_UTR
ACAGCTGAAGGTGTTGAGGA+AGG 0.604487 7_1:-70248804 Msa1034690:five_prime_UTR
AGAGATTGGGAAAATTGGGT+TGG 0.605144 7_1:-70246114 Msa1034690:three_prime_UTR
GACAAATCAAGGCCTTCACA+TGG 0.607264 7_1:-70249582 Msa1034690:five_prime_UTR
CTTTCAGTATGGTCTTGCCA+TGG 0.607579 7_1:+70250531 None:intergenic
TGTCCATAACAATGTCGGGT+TGG 0.608978 7_1:+70248023 None:intergenic
GCGCCGCCTTCTGTATCACA+AGG 0.611777 7_1:-70251077 Msa1034690:five_prime_UTR
ACATGTCCTCTTGAGGAACT+GGG 0.612797 7_1:+70246253 None:intergenic
AGACGAAATATGGATGGTGT+GGG 0.612912 7_1:+70247676 None:intergenic
CCAGCGTCCGCTGAAGTGTG+CGG 0.613170 7_1:-70246337 Msa1034690:CDS
ATGTAACTGCAGTCTATCAG+AGG 0.613259 7_1:-70248666 Msa1034690:intron
ATTGCTGCAAATGATATACC+AGG 0.615317 7_1:+70246555 None:intergenic
GGTCTTAAACATCTAGTAGA+CGG 0.618889 7_1:-70248314 Msa1034690:five_prime_UTR
GAAGGCGGCGCTTGATACAA+GGG 0.620962 7_1:+70251089 None:intergenic
GAGAATGGGAACTTGTGGAA+AGG 0.621348 7_1:-70250005 Msa1034690:five_prime_UTR
CCGGTCTGCCAAAATTTGTG+GGG 0.621944 7_1:-70249723 Msa1034690:five_prime_UTR
CGGTTCCTTATCATAGATGA+CGG 0.623972 7_1:-70248629 Msa1034690:five_prime_UTR
AGAGAGCAAAGATAGTGAAG+GGG 0.624763 7_1:-70249951 Msa1034690:five_prime_UTR
CCATCTACCGCACACTTCAG+CGG 0.625492 7_1:+70246330 None:intergenic
CCTTGTAGAACAGATCGGAA+TGG 0.630384 7_1:+70249875 None:intergenic
AGCTGCGAGTAAGTGAGACT+CGG 0.633741 7_1:+70247849 None:intergenic
TGTAACTGCAGTCTATCAGA+GGG 0.634473 7_1:-70248665 Msa1034690:intron
CATGGCAAGACCATACTGAA+AGG 0.639275 7_1:-70250530 Msa1034690:five_prime_UTR
GGTTTGCTACTATGTTGACA+GGG 0.639787 7_1:-70248397 Msa1034690:five_prime_UTR
AACACAGTGATTAAGTGCTG+AGG 0.640837 7_1:-70250605 Msa1034690:intron
GTGTTGAGGAAGGCCTGAAG+AGG 0.642831 7_1:-70248794 Msa1034690:intron
GTTGGTGTATTCAACTGCCA+AGG 0.642913 7_1:-70247050 Msa1034690:CDS
ACAAAGAGTGAGTCGCGCGT+AGG 0.646366 7_1:+70247235 None:intergenic
TTATACCCTTGTGATACAGA+AGG 0.646776 7_1:+70251071 None:intergenic
CATGCATGTAAACCATGTGA+AGG 0.648775 7_1:+70249570 None:intergenic
TGTGGGAAGCGGGATCACGC+GGG 0.652404 7_1:+70247693 None:intergenic
GTAGCTGGTGCTGAATGGCA+TGG 0.653985 7_1:-70246924 Msa1034690:CDS
GCTTCCGGTTCAAGTTATGG+TGG 0.656444 7_1:-70250036 Msa1034690:five_prime_UTR
TCTTTGGATGTACTAGACCA+AGG 0.658245 7_1:+70247984 None:intergenic
TACCCTTGTGATACAGAAGG+CGG 0.660103 7_1:+70251074 None:intergenic
ACAGAGCTAGTAAGTGTACC+GGG 0.660441 7_1:+70246978 None:intergenic
ATGGACATGTTCAACACAGG+AGG 0.660528 7_1:-70246525 Msa1034690:CDS
ACACTTCAGCGGACGCTGGG+AGG 0.665564 7_1:+70246341 None:intergenic
ACCCTTGGCGCTGGACATGG+TGG 0.666705 7_1:-70247872 Msa1034690:CDS
AAGTGAAGTACATTCCAGGA+GGG 0.675086 7_1:+70251495 None:intergenic
GTTGATGAGATCAACATCAG+AGG 0.675809 7_1:+70246950 None:intergenic
CTGATGGACATGTTCAACAC+AGG 0.676150 7_1:-70246528 Msa1034690:CDS
AGATGTTTAAGACCTGATGT+CGG 0.681015 7_1:+70248323 None:intergenic
CGCCGCCTTCTGTATCACAA+GGG 0.681160 7_1:-70251076 Msa1034690:intron
TCAACTGCCAAGGTGCTGGG+TGG 0.685279 7_1:-70247040 Msa1034690:CDS
TGCAACAGACGAAATATGGA+TGG 0.685520 7_1:+70247670 None:intergenic
GAAGTGAAGTACATTCCAGG+AGG 0.688983 7_1:+70251494 None:intergenic
AGCATGAATTGAGTCTCCAG+AGG 0.706669 7_1:+70249977 None:intergenic
AACTGCAGTCTATCAGAGGG+AGG 0.707342 7_1:-70248662 Msa1034690:intron
TCATCTATGATAAGGAACCG+CGG 0.749631 7_1:+70248632 None:intergenic
TCTATGATAAGGAACCGCGG+AGG 0.806296 7_1:+70248635 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTTTTTTATTTTGTGA+CGG + chr7_1:70246520-70246539 None:intergenic 10.0%
!! TAATTATTCAAATTCTTAAT+TGG - chr7_1:70249183-70249202 Msa1034690:intron 10.0%
!! TTGAAGATGATAATTAATTA+TGG - chr7_1:70246093-70246112 Msa1034690:three_prime_UTR 15.0%
!!! TTTTATGAGAAGAAAAATAA+TGG + chr7_1:70246349-70246368 None:intergenic 15.0%
!!! TATTTTTCTTCTCATAAAAT+TGG - chr7_1:70246350-70246369 Msa1034690:CDS 15.0%
!! TTCTAATATAAAAATATGCA+TGG + chr7_1:70246390-70246409 None:intergenic 15.0%
!! TAAATTGTAATTATTATTGC+AGG - chr7_1:70248953-70248972 Msa1034690:intron 15.0%
!! TTGTATAAAAAAGTAAGTTA+AGG + chr7_1:70249121-70249140 None:intergenic 15.0%
!!! TTTTTTTTCCTTTTAAAGTC+AGG - chr7_1:70246225-70246244 Msa1034690:CDS 20.0%
!!! TTTTTCTCACAAAAAATCAA+TGG - chr7_1:70246557-70246576 Msa1034690:CDS 20.0%
!! TTAATACTACTAACTAAGTT+TGG + chr7_1:70246583-70246602 None:intergenic 20.0%
!! TACTATTGATGTACAAAATT+TGG - chr7_1:70246613-70246632 Msa1034690:intron 20.0%
!! AAATGATGAAAATTATGATG+CGG + chr7_1:70247062-70247081 None:intergenic 20.0%
!! TTTGATATTTCGATAAATCA+CGG - chr7_1:70247108-70247127 Msa1034690:intron 20.0%
!! AATAAGCTAAAAATCGTTTA+TGG + chr7_1:70247961-70247980 None:intergenic 20.0%
!! GTTAGAATATATTCTTCATT+TGG - chr7_1:70248266-70248285 Msa1034690:intron 20.0%
!! TTAATAGATCAAACAGAAAA+AGG + chr7_1:70248336-70248355 None:intergenic 20.0%
!!! TTTTTCTGTTTGATCTATTA+AGG - chr7_1:70248335-70248354 Msa1034690:five_prime_UTR 20.0%
!!! TTTTCTGTTTGATCTATTAA+GGG - chr7_1:70248336-70248355 Msa1034690:five_prime_UTR 20.0%
!! TGTAGTTATTGAAATGAAAA+TGG + chr7_1:70248863-70248882 None:intergenic 20.0%
!! AAATTTCAAAAGAGTAAGAA+TGG - chr7_1:70249012-70249031 Msa1034690:five_prime_UTR 20.0%
!! AAAAAGTAAGTTAAGGAAAT+AGG + chr7_1:70249114-70249133 None:intergenic 20.0%
!!! ATAAAAAACAGGTTTAGAAT+TGG + chr7_1:70249965-70249984 None:intergenic 20.0%
!!! AACCTGTTTTTTATACATAT+TGG - chr7_1:70249971-70249990 Msa1034690:five_prime_UTR 20.0%
!! TTCCAATATGTATAAAAAAC+AGG + chr7_1:70249976-70249995 None:intergenic 20.0%
!!! GTTTTTTATACATATTGGAA+TGG - chr7_1:70249976-70249995 Msa1034690:five_prime_UTR 20.0%
!! TAGAAAAATAAGATTGTTGA+GGG - chr7_1:70251563-70251582 Msa1034690:five_prime_UTR 20.0%
!! TTTTGTTAGATTCACTTTGT+AGG - chr7_1:70246131-70246150 Msa1034690:three_prime_UTR 25.0%
! AAAGTAAACCTGACTTTAAA+AGG + chr7_1:70246236-70246255 None:intergenic 25.0%
!!! TTTACTTTTTTCTTCAGTGA+CGG - chr7_1:70246248-70246267 Msa1034690:CDS 25.0%
! AATTGGGAAAACTTAATTGT+TGG - chr7_1:70246321-70246340 Msa1034690:CDS 25.0%
!!! TTTTTTATTTTGTGACGGAA+AGG + chr7_1:70246515-70246534 None:intergenic 25.0%
!! ATTTGGATATAACGTTCTTT+TGG - chr7_1:70246630-70246649 Msa1034690:intron 25.0%
!!! CTTATCAAGGTTTTAAATCA+CGG - chr7_1:70247018-70247037 Msa1034690:CDS 25.0%
!! CTTTGGAGAAAATATGTATA+AGG - chr7_1:70247704-70247723 Msa1034690:CDS 25.0%
! AGAGATTATGAAAAAAACGT+AGG - chr7_1:70247929-70247948 Msa1034690:five_prime_UTR 25.0%
! ACACTTATATGATAAGTGTT+TGG - chr7_1:70248063-70248082 Msa1034690:five_prime_UTR 25.0%
! CACTTATATGATAAGTGTTT+GGG - chr7_1:70248064-70248083 Msa1034690:five_prime_UTR 25.0%
! TATGCATAATGATTACCTTA+TGG - chr7_1:70248443-70248462 Msa1034690:intron 25.0%
!! TTAATTGGTTACTTTGTTGA+TGG - chr7_1:70249198-70249217 Msa1034690:intron 25.0%
! TGAATTTGGTATAACTTACA+TGG + chr7_1:70249777-70249796 None:intergenic 25.0%
! ATTATAATTGGAGGTGAATT+TGG + chr7_1:70249791-70249810 None:intergenic 25.0%
! AAATTAACATCTGAAAAAGC+AGG + chr7_1:70249823-70249842 None:intergenic 25.0%
!!! TTTTCAGCTTGCTAAAAATA+TGG - chr7_1:70250274-70250293 Msa1034690:intron 25.0%
!!! GATGTAATGTTTTATTCAAC+AGG - chr7_1:70250785-70250804 Msa1034690:intron 25.0%
!!! GTGTTTTTATGACTTAAACT+TGG + chr7_1:70251163-70251182 None:intergenic 25.0%
! GTTTAAGTCATAAAAACACT+TGG - chr7_1:70251164-70251183 Msa1034690:intron 25.0%
! TGGTATTTATTGAAATGTGT+AGG - chr7_1:70251184-70251203 Msa1034690:intron 25.0%
! GGTATTTATTGAAATGTGTA+GGG - chr7_1:70251185-70251204 Msa1034690:intron 25.0%
!! GTTTGAAATATTGTTGAGAT+TGG - chr7_1:70251483-70251502 Msa1034690:five_prime_UTR 25.0%
!! AATATGTTATTTGTATGCCA+AGG - chr7_1:70251523-70251542 Msa1034690:five_prime_UTR 25.0%
!!! TTTTTCTACTTGCTAATTAC+AGG + chr7_1:70251551-70251570 None:intergenic 25.0%
! GTAGAAAAATAAGATTGTTG+AGG - chr7_1:70251562-70251581 Msa1034690:five_prime_UTR 25.0%
!! ATTGTTTGAAATGTTGAAAC+AGG - chr7_1:70251586-70251605 Msa1034690:five_prime_UTR 25.0%
AGAAGTGGAGAAATGTAAAT+TGG + chr7_1:70245974-70245993 None:intergenic 30.0%
!! TTCGGTTATTCTAAGATAAG+AGG - chr7_1:70246020-70246039 Msa1034690:three_prime_UTR 30.0%
! GATGAACTTGTCTTTCATTT+TGG - chr7_1:70246168-70246187 Msa1034690:three_prime_UTR 30.0%
! TGTATCACAAGGGTATAATT+GGG - chr7_1:70246305-70246324 Msa1034690:CDS 30.0%
! AACAATAAGGAGCATAAGAT+TGG + chr7_1:70246737-70246756 None:intergenic 30.0%
TGTTACGATAGCAAACAATA+AGG + chr7_1:70246750-70246769 None:intergenic 30.0%
AACCTCAAATACACTTATCA+AGG - chr7_1:70247005-70247024 Msa1034690:CDS 30.0%
AACCTTGATAAGTGTATTTG+AGG + chr7_1:70247010-70247029 None:intergenic 30.0%
CGTGATTAACTAGAATATCA+CGG + chr7_1:70247146-70247165 None:intergenic 30.0%
! CGTGATATTCTAGTTAATCA+CGG - chr7_1:70247144-70247163 Msa1034690:intron 30.0%
ACTCTTTATCATGCGAAAAA+CGG - chr7_1:70247564-70247583 Msa1034690:intron 30.0%
TGGAGAAAATATGTATAAGG+TGG - chr7_1:70247707-70247726 Msa1034690:CDS 30.0%
ATACCAAAAGGAGTTTGATT+GGG + chr7_1:70247736-70247755 None:intergenic 30.0%
AAACCAAATCACATACCAAA+AGG + chr7_1:70247748-70247767 None:intergenic 30.0%
! ACATTTTTCCCATTACTGTA+GGG - chr7_1:70247869-70247888 Msa1034690:CDS 30.0%
TAAGCATTTGTGAGATTGTT+TGG - chr7_1:70247905-70247924 Msa1034690:exon 30.0%
TAAGTCAAGTTAAACGATCA+CGG + chr7_1:70248212-70248231 None:intergenic 30.0%
ACAAGGTTAAAAGATCCATA+AGG + chr7_1:70248461-70248480 None:intergenic 30.0%
ACAGATTGAAACTAAAGCAA+AGG - chr7_1:70248771-70248790 Msa1034690:intron 30.0%
AAACATCACAATGTCAAGTA+TGG - chr7_1:70249087-70249106 Msa1034690:intron 30.0%
TGGACAGAAATGTTTATGTA+TGG - chr7_1:70249218-70249237 Msa1034690:intron 30.0%
TAGAAGTTGAAAACCTTCTT+TGG + chr7_1:70249406-70249425 None:intergenic 30.0%
CAAAACATTATTGAAACCCT+TGG - chr7_1:70249484-70249503 Msa1034690:intron 30.0%
CACTGACAAATTATAATTGG+AGG + chr7_1:70249800-70249819 None:intergenic 30.0%
!! AGGCACTGACAAATTATAAT+TGG + chr7_1:70249803-70249822 None:intergenic 30.0%
! TGATTTTATAGTGATAAGCC+AGG - chr7_1:70250037-70250056 Msa1034690:five_prime_UTR 30.0%
AGAGTTAAGTAAAACAAACC+TGG + chr7_1:70250182-70250201 None:intergenic 30.0%
ATTGTTTATGCTTACAGATC+AGG - chr7_1:70250477-70250496 Msa1034690:five_prime_UTR 30.0%
! AAATCCACCTTCATATTTTC+AGG - chr7_1:70250596-70250615 Msa1034690:five_prime_UTR 30.0%
!! AAATAGCTCTTGTTTGTTGT+CGG + chr7_1:70250904-70250923 None:intergenic 30.0%
AACAAACAAGAGCTATTTGA+TGG - chr7_1:70250906-70250925 Msa1034690:intron 30.0%
TTCTGAGTTATAGTCGAAAT+CGG + chr7_1:70251075-70251094 None:intergenic 30.0%
TTCGACTATAACTCAGAAAA+TGG - chr7_1:70251077-70251096 Msa1034690:five_prime_UTR 30.0%
TCGACTATAACTCAGAAAAT+GGG - chr7_1:70251078-70251097 Msa1034690:five_prime_UTR 30.0%
! GGTAATAACTACTACACTTT+TGG - chr7_1:70251221-70251240 Msa1034690:intron 30.0%
!!! TTTTAACTTGTAACGTATGC+AGG - chr7_1:70251286-70251305 Msa1034690:intron 30.0%
TTGCAAATTATGTCATGTGT+TGG - chr7_1:70251315-70251334 Msa1034690:intron 30.0%
! ACCAGAACATAAGATTTTTG+AGG - chr7_1:70251456-70251475 Msa1034690:five_prime_UTR 30.0%
! CCAGAACATAAGATTTTTGA+GGG - chr7_1:70251457-70251476 Msa1034690:five_prime_UTR 30.0%
TCTCTAAGCTACAAACGTTA+CGG - chr7_1:70245993-70246012 Msa1034690:three_prime_UTR 35.0%
TACAAACGTTACGGTAAGTT+CGG - chr7_1:70246002-70246021 Msa1034690:three_prime_UTR 35.0%
TTATACCCTTGTGATACAGA+AGG + chr7_1:70246303-70246322 None:intergenic 35.0%
! CTGTATCACAAGGGTATAAT+TGG - chr7_1:70246304-70246323 Msa1034690:CDS 35.0%
! ATAAGGAGCATAAGATTGGT+TGG + chr7_1:70246733-70246752 None:intergenic 35.0%
TCTAATATCTCCGTTGACAA+TGG - chr7_1:70246805-70246824 Msa1034690:intron 35.0%
AACCAAGTTTCCATTGTCAA+CGG + chr7_1:70246818-70246837 None:intergenic 35.0%
!! ACTTACTCTAGGATACCAAT+GGG + chr7_1:70246970-70246989 None:intergenic 35.0%
!! AACTTACTCTAGGATACCAA+TGG + chr7_1:70246971-70246990 None:intergenic 35.0%
AAGCTAGAAGAACTTACTCT+AGG + chr7_1:70246981-70247000 None:intergenic 35.0%
! ATTCTAGTTAATCACGGTTG+CGG - chr7_1:70247150-70247169 Msa1034690:intron 35.0%
GAACATGGTCAGCAAAAAAA+AGG + chr7_1:70247243-70247262 None:intergenic 35.0%
GTTTCAATGAAAGCAGAACA+TGG + chr7_1:70247258-70247277 None:intergenic 35.0%
! AACACGTGAACTTTATTTGC+AGG - chr7_1:70247293-70247312 Msa1034690:CDS 35.0%
! ACACGTGAACTTTATTTGCA+GGG - chr7_1:70247294-70247313 Msa1034690:CDS 35.0%
ATAGAGAGCAAAGATAGTGA+AGG - chr7_1:70247418-70247437 Msa1034690:intron 35.0%
TAGAGAGCAAAGATAGTGAA+GGG - chr7_1:70247419-70247438 Msa1034690:intron 35.0%
CTGTTAAATTCAGTTCCTTC+CGG - chr7_1:70247629-70247648 Msa1034690:CDS 35.0%
GCAAATGGAGTTTATAGCTT+TGG - chr7_1:70247687-70247706 Msa1034690:CDS 35.0%
! TATCCCAATCAAACTCCTTT+TGG - chr7_1:70247730-70247749 Msa1034690:CDS 35.0%
CATACCAAAAGGAGTTTGAT+TGG + chr7_1:70247737-70247756 None:intergenic 35.0%
! ACTCCTTTTGGTATGTGATT+TGG - chr7_1:70247742-70247761 Msa1034690:CDS 35.0%
!! GTTGATGACTTCAAAAGGAT+TGG + chr7_1:70247833-70247852 None:intergenic 35.0%
GGGAAAAATGTCTTACTTGA+CGG + chr7_1:70247860-70247879 None:intergenic 35.0%
! GACATTTTTCCCATTACTGT+AGG - chr7_1:70247868-70247887 Msa1034690:CDS 35.0%
CTTATTTCCATAAGCTCTTC+AGG - chr7_1:70247975-70247994 Msa1034690:five_prime_UTR 35.0%
AAACTATCCTGAAGAGCTTA+TGG + chr7_1:70247985-70248004 None:intergenic 35.0%
AAGCTCTTCAGGATAGTTTA+CGG - chr7_1:70247986-70248005 Msa1034690:five_prime_UTR 35.0%
AGTACAAAACAGGCTATGTT+TGG + chr7_1:70248174-70248193 None:intergenic 35.0%
AAGTCAAGTTAAACGATCAC+GGG + chr7_1:70248211-70248230 None:intergenic 35.0%
ACTACAATGCAAACAAGATC+AGG + chr7_1:70248245-70248264 None:intergenic 35.0%
! ATCTTTTAACCTTGTTCTGC+TGG - chr7_1:70248466-70248485 Msa1034690:intron 35.0%
CATATAAAACCAGCAGAACA+AGG + chr7_1:70248478-70248497 None:intergenic 35.0%
CCAAACATGTCAAGAAAAGA+TGG + chr7_1:70248513-70248532 None:intergenic 35.0%
! CCATCTTTTCTTGACATGTT+TGG - chr7_1:70248510-70248529 Msa1034690:intron 35.0%
! CTTTTCTTGACATGTTTGGT+TGG - chr7_1:70248514-70248533 Msa1034690:intron 35.0%
CTCTCAATAATTACCTCTTC+AGG + chr7_1:70248593-70248612 None:intergenic 35.0%
TACTATGTTGACAGGGATTA+AGG - chr7_1:70248981-70249000 Msa1034690:intron 35.0%
! AGATGTTTAAGACCTGATGT+CGG + chr7_1:70249051-70249070 None:intergenic 35.0%
GGTCTTAAACATCTAGTAGA+CGG - chr7_1:70249057-70249076 Msa1034690:intron 35.0%
GTCAGAAAAGTTACGAGAAA+TGG + chr7_1:70249569-70249588 None:intergenic 35.0%
! TCTCGTAACTTTTCTGACAA+TGG - chr7_1:70249571-70249590 Msa1034690:five_prime_UTR 35.0%
TGTATGTGTCATAACACTGA+TGG - chr7_1:70249604-70249623 Msa1034690:five_prime_UTR 35.0%
TGTATGCAACAGACGAAATA+TGG + chr7_1:70249708-70249727 None:intergenic 35.0%
!! GCATACAATTCACTTTTCCT+TGG - chr7_1:70249721-70249740 Msa1034690:five_prime_UTR 35.0%
TAGCTGTACCTGACATAAAT+TGG + chr7_1:70249936-70249955 None:intergenic 35.0%
!! ACCACAATTTTGACCTTCTT+AGG - chr7_1:70250062-70250081 Msa1034690:intron 35.0%
TCCTAAGAAGGTCAAAATTG+TGG + chr7_1:70250066-70250085 None:intergenic 35.0%
! TTTTGACCTTCTTAGGAAGT+TGG - chr7_1:70250069-70250088 Msa1034690:intron 35.0%
CTGAGAAACATAGACTCAAA+AGG + chr7_1:70250216-70250235 None:intergenic 35.0%
TGGAACATGAACAAATGTAC+TGG - chr7_1:70250294-70250313 Msa1034690:intron 35.0%
AACAAATGTACTGGAGTTGT+TGG - chr7_1:70250303-70250322 Msa1034690:intron 35.0%
TTCGATTCCAGTAACACTAA+AGG - chr7_1:70250646-70250665 Msa1034690:intron 35.0%
! TTACTTGGATTGGACAGAAA+TGG + chr7_1:70250691-70250710 None:intergenic 35.0%
TTGTGATGTCTTACTTGGAT+TGG + chr7_1:70250701-70250720 None:intergenic 35.0%
CAGTGACATACAACATAAAC+TGG + chr7_1:70250724-70250743 None:intergenic 35.0%
CAGTTTATGTTGTATGTCAC+TGG - chr7_1:70250722-70250741 Msa1034690:intron 35.0%
ATTGCTGCAAATGATATACC+AGG + chr7_1:70250819-70250838 None:intergenic 35.0%
GGTATATCATTTGCAGCAAT+AGG - chr7_1:70250819-70250838 Msa1034690:intron 35.0%
!! ATTTGATGGTGAGGTTGTTT+CGG - chr7_1:70250920-70250939 Msa1034690:intron 35.0%
CACTTTCAAAGCAATAGTTG+CGG + chr7_1:70250982-70251001 None:intergenic 35.0%
!! ACTATTGCTTTGAAAGTGAG+AGG - chr7_1:70250984-70251003 Msa1034690:intron 35.0%
! GTTATAGTCGAAATCGGTTT+CGG + chr7_1:70251069-70251088 None:intergenic 35.0%
CATTTATACATGTCCTCTTG+AGG + chr7_1:70251128-70251147 None:intergenic 35.0%
CTCAAGAGGACATGTATAAA+TGG - chr7_1:70251126-70251145 Msa1034690:five_prime_UTR 35.0%
ACAGAACATACTACATCCAT+GGG + chr7_1:70251362-70251381 None:intergenic 35.0%
AACAGAACATACTACATCCA+TGG + chr7_1:70251363-70251382 None:intergenic 35.0%
CCCTCAAAAATCTTATGTTC+TGG + chr7_1:70251460-70251479 None:intergenic 35.0%
AAGTGAAGTACATTCCAGGA+GGG + chr7_1:70245879-70245898 None:intergenic 40.0%
CTAGAAGTGAAGTACATTCC+AGG + chr7_1:70245883-70245902 None:intergenic 40.0%
GTTTGTAGCTTAGAGAGAAG+TGG + chr7_1:70245989-70246008 None:intergenic 40.0%
! TTTTTCTTCAGTGACGGTGA+CGG - chr7_1:70246254-70246273 Msa1034690:CDS 40.0%
! AACACAGTGATTAAGTGCTG+AGG - chr7_1:70246766-70246785 Msa1034690:intron 40.0%
AATGGAAACTTGGTTGTCCA+TGG - chr7_1:70246823-70246842 Msa1034690:intron 40.0%
! GAGTCAGCACAACATTTTCT+GGG + chr7_1:70246870-70246889 None:intergenic 40.0%
! CACGTGAACTTTATTTGCAG+GGG - chr7_1:70247295-70247314 Msa1034690:CDS 40.0%
! ACGTGAACTTTATTTGCAGG+GGG - chr7_1:70247296-70247315 Msa1034690:CDS 40.0%
TCATCCACCATAACTTGAAC+CGG + chr7_1:70247342-70247361 None:intergenic 40.0%
TTGTGGAAAGGATATACCTC+TGG - chr7_1:70247378-70247397 Msa1034690:intron 40.0%
AGAGAGCAAAGATAGTGAAG+GGG - chr7_1:70247420-70247439 Msa1034690:intron 40.0%
CATTGCCTTGTAGAACAGAT+CGG + chr7_1:70247504-70247523 None:intergenic 40.0%
TGCGAAAAACGGTTTAGTGT+AGG - chr7_1:70247575-70247594 Msa1034690:intron 40.0%
GGAGCTGTCATTAATGCAAA+TGG - chr7_1:70247672-70247691 Msa1034690:CDS 40.0%
!!! GGTATGTGATTTGGTTTTGC+AGG - chr7_1:70247751-70247770 Msa1034690:CDS 40.0%
CATGCTGTTGAGACAAATCA+AGG - chr7_1:70247778-70247797 Msa1034690:CDS 40.0%
CATGCATGTAAACCATGTGA+AGG + chr7_1:70247804-70247823 None:intergenic 40.0%
!! GCTTGGTTGATGACTTCAAA+AGG + chr7_1:70247838-70247857 None:intergenic 40.0%
AAATGTCTTACTTGACGGCT+TGG + chr7_1:70247855-70247874 None:intergenic 40.0%
CCTAACAACCCTACAGTAAT+GGG + chr7_1:70247880-70247899 None:intergenic 40.0%
TCCTAACAACCCTACAGTAA+TGG + chr7_1:70247881-70247900 None:intergenic 40.0%
! CTAGGGGAAAAGTACAAAAC+AGG + chr7_1:70248184-70248203 None:intergenic 40.0%
AGTCAAGTTAAACGATCACG+GGG + chr7_1:70248210-70248229 None:intergenic 40.0%
GTTTGATCTATTAAGGGCTG+TGG - chr7_1:70248342-70248361 Msa1034690:five_prime_UTR 40.0%
AAGACCCTCTTGTAGCATTA+CGG - chr7_1:70248408-70248427 Msa1034690:intron 40.0%
TCATCCGTAATGCTACAAGA+GGG + chr7_1:70248415-70248434 None:intergenic 40.0%
TTCATCCGTAATGCTACAAG+AGG + chr7_1:70248416-70248435 None:intergenic 40.0%
TATACTGACGTAACAGCTGA+AGG - chr7_1:70248555-70248574 Msa1034690:intron 40.0%
ATGTAACTGCAGTCTATCAG+AGG - chr7_1:70248705-70248724 Msa1034690:intron 40.0%
TGTAACTGCAGTCTATCAGA+GGG - chr7_1:70248706-70248725 Msa1034690:intron 40.0%
TCATCTATGATAAGGAACCG+CGG + chr7_1:70248742-70248761 None:intergenic 40.0%
CGGTTCCTTATCATAGATGA+CGG - chr7_1:70248742-70248761 Msa1034690:intron 40.0%
!! AGGTTTGCTACTATGTTGAC+AGG - chr7_1:70248973-70248992 Msa1034690:intron 40.0%
!! GGTTTGCTACTATGTTGACA+GGG - chr7_1:70248974-70248993 Msa1034690:intron 40.0%
AAACCAACCCGACATTGTTA+TGG - chr7_1:70249345-70249364 Msa1034690:intron 40.0%
AAGCTGTCCATAACAATGTC+GGG + chr7_1:70249355-70249374 None:intergenic 40.0%
CAAGCTGTCCATAACAATGT+CGG + chr7_1:70249356-70249375 None:intergenic 40.0%
TCTTTGGATGTACTAGACCA+AGG + chr7_1:70249390-70249409 None:intergenic 40.0%
TGGTCTAGTACATCCAAAGA+AGG - chr7_1:70249390-70249409 Msa1034690:intron 40.0%
CACATGAAGCTAAGTAAGCA+TGG + chr7_1:70249438-70249457 None:intergenic 40.0%
CATGCTTACTTAGCTTCATG+TGG - chr7_1:70249436-70249455 Msa1034690:intron 40.0%
TTAGCTTCATGTGGAGTAGA+TGG - chr7_1:70249445-70249464 Msa1034690:intron 40.0%
AGACGAAATATGGATGGTGT+GGG + chr7_1:70249698-70249717 None:intergenic 40.0%
TGCAACAGACGAAATATGGA+TGG + chr7_1:70249704-70249723 None:intergenic 40.0%
AGAGTTTATGCAGCCAGATT+GGG - chr7_1:70249744-70249763 Msa1034690:intron 40.0%
GTGGTTGTCCAATTTATGTC+AGG - chr7_1:70249925-70249944 Msa1034690:five_prime_UTR 40.0%
GAAGAACCAACTTCCTAAGA+AGG + chr7_1:70250078-70250097 None:intergenic 40.0%
AACAGAGCTAGTAAGTGTAC+CGG + chr7_1:70250397-70250416 None:intergenic 40.0%
! GTTGATGAGATCAACATCAG+AGG + chr7_1:70250424-70250443 None:intergenic 40.0%
TCCAGTAACACTAAAGGTTC+TGG - chr7_1:70250652-70250671 Msa1034690:intron 40.0%
TCCAGAACCTTTAGTGTTAC+TGG + chr7_1:70250656-70250675 None:intergenic 40.0%
ACTGGTTGTGATGTCTTACT+TGG + chr7_1:70250706-70250725 None:intergenic 40.0%
!! ACAAGAGCTATTTGATGGTG+AGG - chr7_1:70250911-70250930 Msa1034690:intron 40.0%
TACCATGTAGCTGAGAGATT+GGG - chr7_1:70251244-70251263 Msa1034690:intron 40.0%
AGCTGAGAGATTGGGAAAAT+TGG - chr7_1:70251252-70251271 Msa1034690:intron 40.0%
GCTGAGAGATTGGGAAAATT+GGG - chr7_1:70251253-70251272 Msa1034690:intron 40.0%
AGAGATTGGGAAAATTGGGT+TGG - chr7_1:70251257-70251276 Msa1034690:intron 40.0%
TTATGTCATGTGTTGGAGAG+AGG - chr7_1:70251322-70251341 Msa1034690:intron 40.0%
CTTGCTAATTACAGGTTCCT+TGG + chr7_1:70251543-70251562 None:intergenic 40.0%
!! ATAGAAGAAGCATTCCCTCC+TGG - chr7_1:70245862-70245881 Msa1034690:three_prime_UTR 45.0%
GAAGTGAAGTACATTCCAGG+AGG + chr7_1:70245880-70245899 None:intergenic 45.0%
TACCCTTGTGATACAGAAGG+CGG + chr7_1:70246300-70246319 None:intergenic 45.0%
CTCCGTTGACAATGGAAACT+TGG - chr7_1:70246813-70246832 Msa1034690:intron 45.0%
! CTTTCAGTATGGTCTTGCCA+TGG + chr7_1:70246843-70246862 None:intergenic 45.0%
CATGGCAAGACCATACTGAA+AGG - chr7_1:70246841-70246860 Msa1034690:intron 45.0%
!! TTCTGGGACACCTTTCAGTA+TGG + chr7_1:70246854-70246873 None:intergenic 45.0%
! GGAGTCAGCACAACATTTTC+TGG + chr7_1:70246871-70246890 None:intergenic 45.0%
CTGACTCCAGATTCTGGTAA+TGG - chr7_1:70246883-70246902 Msa1034690:intron 45.0%
GCAAGACCATTACCAGAATC+TGG + chr7_1:70246892-70246911 None:intergenic 45.0%
!! TCTGGTAATGGTCTTGCTAC+TGG - chr7_1:70246895-70246914 Msa1034690:CDS 45.0%
CTTGCTACTGGTGCATTCAT+TGG - chr7_1:70246907-70246926 Msa1034690:CDS 45.0%
! AACGTGGAGGCTTTTGGTAT+GGG + chr7_1:70246944-70246963 None:intergenic 45.0%
! AAACGTGGAGGCTTTTGGTA+TGG + chr7_1:70246945-70246964 None:intergenic 45.0%
TACCAATGGGAAAAACGTGG+AGG + chr7_1:70246957-70246976 None:intergenic 45.0%
GGATACCAATGGGAAAAACG+TGG + chr7_1:70246960-70246979 None:intergenic 45.0%
! GTTGCTTCCGGTTCAAGTTA+TGG - chr7_1:70247332-70247351 Msa1034690:intron 45.0%
!! ATGGTGGATGACACAGAGAA+TGG - chr7_1:70247351-70247370 Msa1034690:intron 45.0%
! TGGTGGATGACACAGAGAAT+GGG - chr7_1:70247352-70247371 Msa1034690:intron 45.0%
ACACAGAGAATGGGAACTTG+TGG - chr7_1:70247361-70247380 Msa1034690:intron 45.0%
GAGAATGGGAACTTGTGGAA+AGG - chr7_1:70247366-70247385 Msa1034690:intron 45.0%
AGCATGAATTGAGTCTCCAG+AGG + chr7_1:70247397-70247416 None:intergenic 45.0%
AGCAAAGATAGTGAAGGGGA+AGG - chr7_1:70247424-70247443 Msa1034690:intron 45.0%
GCAAAGATAGTGAAGGGGAA+GGG - chr7_1:70247425-70247444 Msa1034690:intron 45.0%
CAAAGATAGTGAAGGGGAAG+GGG - chr7_1:70247426-70247445 Msa1034690:intron 45.0%
AGCAAGACAGTGTAGACGAT+GGG + chr7_1:70247460-70247479 None:intergenic 45.0%
AAGCAAGACAGTGTAGACGA+TGG + chr7_1:70247461-70247480 None:intergenic 45.0%
CACTGTCTTGCTTCCTCTAT+TGG - chr7_1:70247468-70247487 Msa1034690:CDS 45.0%
GTCTTGCTTCCTCTATTGGA+AGG - chr7_1:70247472-70247491 Msa1034690:CDS 45.0%
CCTTGTAGAACAGATCGGAA+TGG + chr7_1:70247499-70247518 None:intergenic 45.0%
CCATTCCGATCTGTTCTACA+AGG - chr7_1:70247496-70247515 Msa1034690:intron 45.0%
!! ACAAATTTTGGCAGACCGGA+AGG + chr7_1:70247647-70247666 None:intergenic 45.0%
TTCCGGTCTGCCAAAATTTG+TGG - chr7_1:70247646-70247665 Msa1034690:CDS 45.0%
TCCGGTCTGCCAAAATTTGT+GGG - chr7_1:70247647-70247666 Msa1034690:CDS 45.0%
GACAAATCAAGGCCTTCACA+TGG - chr7_1:70247789-70247808 Msa1034690:CDS 45.0%
CACATGGTTTACATGCATGC+TGG - chr7_1:70247805-70247824 Msa1034690:CDS 45.0%
CCCATTACTGTAGGGTTGTT+AGG - chr7_1:70247877-70247896 Msa1034690:CDS 45.0%
TCCATCAAGTGTCTCATGCT+AGG - chr7_1:70248117-70248136 Msa1034690:five_prime_UTR 45.0%
ACAGTTCAACTACGCTCAAC+CGG + chr7_1:70248147-70248166 None:intergenic 45.0%
! ACATGTTTGGTTGGTGCACA+TGG - chr7_1:70248523-70248542 Msa1034690:intron 45.0%
! CATGTTTGGTTGGTGCACAT+GGG - chr7_1:70248524-70248543 Msa1034690:intron 45.0%
! TCCTTATCATAGATGACGGC+TGG - chr7_1:70248746-70248765 Msa1034690:intron 45.0%
CCTTCTTGTACAACACAGTC+AGG + chr7_1:70248799-70248818 None:intergenic 45.0%
CCTGACTGTGTTGTACAAGA+AGG - chr7_1:70248796-70248815 Msa1034690:five_prime_UTR 45.0%
TATGTATGGCATGCACTAGC+TGG - chr7_1:70249232-70249251 Msa1034690:intron 45.0%
GCATGCACTAGCTGGTTATT+GGG - chr7_1:70249240-70249259 Msa1034690:intron 45.0%
CATGCACTAGCTGGTTATTG+GGG - chr7_1:70249241-70249260 Msa1034690:intron 45.0%
TGTCCATAACAATGTCGGGT+TGG + chr7_1:70249351-70249370 None:intergenic 45.0%
ATGGACAGCTTGTCTGTACA+TGG - chr7_1:70249364-70249383 Msa1034690:intron 45.0%
ATGTGGAGTAGATGGAGTGA+AGG - chr7_1:70249453-70249472 Msa1034690:intron 45.0%
ATTATTGAAACCCTTGGCGC+TGG - chr7_1:70249490-70249509 Msa1034690:intron 45.0%
CAGCTATCATCATGCACTTG+AGG - chr7_1:70249540-70249559 Msa1034690:five_prime_UTR 45.0%
ACGCGGGTAAAAATCATCAG+AGG + chr7_1:70249665-70249684 None:intergenic 45.0%
AATATGGATGGTGTGGGAAG+CGG + chr7_1:70249692-70249711 None:intergenic 45.0%
CAGACGAAATATGGATGGTG+TGG + chr7_1:70249699-70249718 None:intergenic 45.0%
GAGAGTTTATGCAGCCAGAT+TGG - chr7_1:70249743-70249762 Msa1034690:intron 45.0%
ACATGGAACATGTCCCAATC+TGG + chr7_1:70249760-70249779 None:intergenic 45.0%
GTGACTTCAGAGTCTACATC+CGG - chr7_1:70249869-70249888 Msa1034690:five_prime_UTR 45.0%
AGGTCAAAATTGTGGTTGCC+TGG + chr7_1:70250058-70250077 None:intergenic 45.0%
! AGGAAGTTGGTTCTTCCTGA+TGG - chr7_1:70250082-70250101 Msa1034690:intron 45.0%
CGACTCACTCTTTGTTGATC+CGG - chr7_1:70250144-70250163 Msa1034690:intron 45.0%
TTGTTGATCCGGCAAGAGAT+AGG - chr7_1:70250155-70250174 Msa1034690:intron 45.0%
GTTGGTGTATTCAACTGCCA+AGG - chr7_1:70250321-70250340 Msa1034690:intron 45.0%
! TATTCAACTGCCAAGGTGCT+GGG - chr7_1:70250328-70250347 Msa1034690:intron 45.0%
ACAGAGCTAGTAAGTGTACC+GGG + chr7_1:70250396-70250415 None:intergenic 45.0%
GATCTCATCAACCAAGTAGC+TGG - chr7_1:70250432-70250451 Msa1034690:five_prime_UTR 45.0%
CTCGCCTGAAAATATGAAGG+TGG + chr7_1:70250603-70250622 None:intergenic 45.0%
!! CACCTTCATATTTTCAGGCG+AGG - chr7_1:70250601-70250620 Msa1034690:five_prime_UTR 45.0%
AGGCGATTCGATTACCGAAA+GGG - chr7_1:70250621-70250640 Msa1034690:intron 45.0%
ATTCAACAGGAAATAGCGCC+TGG - chr7_1:70250798-70250817 Msa1034690:intron 45.0%
ATTTGCAGCAATAGGCCTGA+TGG - chr7_1:70250827-70250846 Msa1034690:intron 45.0%
CTGTGTTGAACATGTCCATC+AGG + chr7_1:70250845-70250864 None:intergenic 45.0%
! CTGATGGACATGTTCAACAC+AGG - chr7_1:70250843-70250862 Msa1034690:intron 45.0%
ATGGACATGTTCAACACAGG+AGG - chr7_1:70250846-70250865 Msa1034690:intron 45.0%
!! TAGCTCTTGTTTGTTGTCGG+AGG + chr7_1:70250901-70250920 None:intergenic 45.0%
CAATAGTTGCGGTTGTCGTT+CGG + chr7_1:70250971-70250990 None:intergenic 45.0%
!! GCTTTGAAAGTGAGAGGAAG+TGG - chr7_1:70250990-70251009 Msa1034690:intron 45.0%
TTGAGGAACTGGGATGTAGA+AGG + chr7_1:70251111-70251130 None:intergenic 45.0%
ACATGTCCTCTTGAGGAACT+GGG + chr7_1:70251121-70251140 None:intergenic 45.0%
TACATGTCCTCTTGAGGAAC+TGG + chr7_1:70251122-70251141 None:intergenic 45.0%
! GTGTAGGGAGAAGAGTTTTG+TGG - chr7_1:70251200-70251219 Msa1034690:intron 45.0%
GTACCATGTAGCTGAGAGAT+TGG - chr7_1:70251243-70251262 Msa1034690:intron 45.0%
TTCCCAATCTCTCAGCTACA+TGG + chr7_1:70251249-70251268 None:intergenic 45.0%
!! GTTGTGCTGACTCCAGATTC+TGG - chr7_1:70246877-70246896 Msa1034690:intron 50.0%
! GGGAAAAACGTGGAGGCTTT+TGG + chr7_1:70246950-70246969 None:intergenic 50.0%
! AGCCTCCACGTTTTTCCCAT+TGG - chr7_1:70246952-70246971 Msa1034690:CDS 50.0%
TGCGGCTACAACTGTTACTG+CGG + chr7_1:70247044-70247063 None:intergenic 50.0%
TAGTCTCGATCGCAGTCGTA+GGG - chr7_1:70247179-70247198 Msa1034690:intron 50.0%
! ACTTTATTTGCAGGGGGCTC+CGG - chr7_1:70247302-70247321 Msa1034690:CDS 50.0%
!! TCCGGTTCATGTGTTGCTTC+CGG - chr7_1:70247320-70247339 Msa1034690:intron 50.0%
ACCGGAAGCAACACATGAAC+CGG + chr7_1:70247324-70247343 None:intergenic 50.0%
! GCTTCCGGTTCAAGTTATGG+TGG - chr7_1:70247335-70247354 Msa1034690:intron 50.0%
CGGAATGGACCTTCCAATAG+AGG + chr7_1:70247484-70247503 None:intergenic 50.0%
ATCGAGATCTGCTTCGAGAG+TGG - chr7_1:70247535-70247554 Msa1034690:intron 50.0%
!! CCCCACAAATTTTGGCAGAC+CGG + chr7_1:70247651-70247670 None:intergenic 50.0%
CCGGTCTGCCAAAATTTGTG+GGG - chr7_1:70247648-70247667 Msa1034690:CDS 50.0%
GTCTGCCAAAATTTGTGGGG+TGG - chr7_1:70247651-70247670 Msa1034690:CDS 50.0%
! CAGCTCCACCCCACAAATTT+TGG + chr7_1:70247659-70247678 None:intergenic 50.0%
GCCTAGCATGAGACACTTGA+TGG + chr7_1:70248121-70248140 None:intergenic 50.0%
AAACGATCACGGGGACACTA+GGG + chr7_1:70248201-70248220 None:intergenic 50.0%
TAAACGATCACGGGGACACT+AGG + chr7_1:70248202-70248221 None:intergenic 50.0%
!! CGTAACAGCTGAAGGTGTTG+AGG - chr7_1:70248563-70248582 Msa1034690:intron 50.0%
!! ACAGCTGAAGGTGTTGAGGA+AGG - chr7_1:70248567-70248586 Msa1034690:intron 50.0%
AACTGCAGTCTATCAGAGGG+AGG - chr7_1:70248709-70248728 Msa1034690:intron 50.0%
TCTATGATAAGGAACCGCGG+AGG + chr7_1:70248739-70248758 None:intergenic 50.0%
GCCAGCCGTCATCTATGATA+AGG + chr7_1:70248750-70248769 None:intergenic 50.0%
GGCATGCACTAGCTGGTTAT+TGG - chr7_1:70249239-70249258 Msa1034690:intron 50.0%
GGAACATTACGACACTGCCT+TGG - chr7_1:70249291-70249310 Msa1034690:intron 50.0%
!! GGTTGGTTTCCTAGTACTCC+CGG + chr7_1:70249334-70249353 None:intergenic 50.0%
AGCTTGTCTGTACATGGCCT+TGG - chr7_1:70249370-70249389 Msa1034690:intron 50.0%
AGCTGCGAGTAAGTGAGACT+CGG + chr7_1:70249525-70249544 None:intergenic 50.0%
CTAAGCAGACTGCTGTTGTG+CGG - chr7_1:70249638-70249657 Msa1034690:five_prime_UTR 50.0%
TAAGCAGACTGCTGTTGTGC+GGG - chr7_1:70249639-70249658 Msa1034690:five_prime_UTR 50.0%
ATATGGATGGTGTGGGAAGC+GGG + chr7_1:70249691-70249710 None:intergenic 50.0%
CTGGCTGCATAAACTCTCCA+AGG + chr7_1:70249741-70249760 None:intergenic 50.0%
GTTCTCCGTGCTCAATTACC+TGG - chr7_1:70250109-70250128 Msa1034690:intron 50.0%
TCCGTGCTCAATTACCTGGA+AGG - chr7_1:70250113-70250132 Msa1034690:intron 50.0%
GCCTTCCAGGTAATTGAGCA+CGG + chr7_1:70250117-70250136 None:intergenic 50.0%
AACCTGGTCCTATCTCTTGC+CGG + chr7_1:70250166-70250185 None:intergenic 50.0%
GTATTCAACTGCCAAGGTGC+TGG - chr7_1:70250327-70250346 Msa1034690:intron 50.0%
CGCATCCATGATACATCTCC+CGG - chr7_1:70250375-70250394 Msa1034690:intron 50.0%
GTGTACCGGGAGATGTATCA+TGG + chr7_1:70250383-70250402 None:intergenic 50.0%
! ACCAAGTAGCTGGTGCTGAA+TGG - chr7_1:70250442-70250461 Msa1034690:five_prime_UTR 50.0%
CGCCTCGCCTGAAAATATGA+AGG + chr7_1:70250606-70250625 None:intergenic 50.0%
GAGGCGATTCGATTACCGAA+AGG - chr7_1:70250620-70250639 Msa1034690:intron 50.0%
GGCGATTCGATTACCGAAAG+GGG - chr7_1:70250622-70250641 Msa1034690:intron 50.0%
ACTGGAATCGAAGCCCCTTT+CGG + chr7_1:70250638-70250657 None:intergenic 50.0%
!! GTTTGTTGTCGGAGGCTCTA+TGG + chr7_1:70250893-70250912 None:intergenic 50.0%
GTGAGAGGAAGTGGCAAGTT+TGG - chr7_1:70250999-70251018 Msa1034690:intron 50.0%
CTACATCCCAGTTCCTCAAG+AGG - chr7_1:70251112-70251131 Msa1034690:five_prime_UTR 50.0%
GGACTGATGTTCTTCTCCCA+TGG - chr7_1:70251343-70251362 Msa1034690:intron 50.0%
GAAGGCGGCGCTTGATACAA+GGG + chr7_1:70246285-70246304 None:intergenic 55.0%
AGAAGGCGGCGCTTGATACA+AGG + chr7_1:70246286-70246305 None:intergenic 55.0%
CGCCGCCTTCTGTATCACAA+GGG - chr7_1:70246295-70246314 Msa1034690:CDS 55.0%
GTAGTCTCGATCGCAGTCGT+AGG - chr7_1:70247178-70247197 Msa1034690:intron 55.0%
TCTAGTCGACGAACCCAGCT+GGG - chr7_1:70248087-70248106 Msa1034690:five_prime_UTR 55.0%
GATGGATAGTGTCCCCAGCT+GGG + chr7_1:70248103-70248122 None:intergenic 55.0%
! TGATGGATAGTGTCCCCAGC+TGG + chr7_1:70248104-70248123 None:intergenic 55.0%
GTGTCTCATGCTAGGCTAGC+CGG - chr7_1:70248125-70248144 Msa1034690:five_prime_UTR 55.0%
AACGATCACGGGGACACTAG+GGG + chr7_1:70248200-70248219 None:intergenic 55.0%
GTGTTGAGGAAGGCCTGAAG+AGG - chr7_1:70248577-70248596 Msa1034690:five_prime_UTR 55.0%
GAGCACAACGAACCGACATC+AGG - chr7_1:70249036-70249055 Msa1034690:intron 55.0%
GCACTAGCTGGTTATTGGGG+TGG - chr7_1:70249244-70249263 Msa1034690:intron 55.0%
CGACTGCACTGGATATGCCA+AGG + chr7_1:70249311-70249330 None:intergenic 55.0%
GCACGGAGAACAGAACCATC+AGG + chr7_1:70250100-70250119 None:intergenic 55.0%
ACAAAGAGTGAGTCGCGCGT+AGG + chr7_1:70250139-70250158 None:intergenic 55.0%
ATCCGGCAAGAGATAGGACC+AGG - chr7_1:70250161-70250180 Msa1034690:intron 55.0%
GCCATTCAGCACCAGCTACT+TGG + chr7_1:70250446-70250465 None:intergenic 55.0%
! GTAGCTGGTGCTGAATGGCA+TGG - chr7_1:70250447-70250466 Msa1034690:five_prime_UTR 55.0%
CACAGGAGGAGCTGTAGAAG+AGG - chr7_1:70250860-70250879 Msa1034690:intron 55.0%
GTTGCGGTTGTCGTTCGGTT+GGG + chr7_1:70250966-70250985 None:intergenic 55.0%
AGTTGCGGTTGTCGTTCGGT+TGG + chr7_1:70250967-70250986 None:intergenic 55.0%
CCATCTACCGCACACTTCAG+CGG + chr7_1:70251044-70251063 None:intergenic 55.0%
GCGCCGCCTTCTGTATCACA+AGG - chr7_1:70246294-70246313 Msa1034690:CDS 60.0%
GTCTAGTCGACGAACCCAGC+TGG - chr7_1:70248086-70248105 Msa1034690:five_prime_UTR 60.0%
CTAGTCGACGAACCCAGCTG+GGG - chr7_1:70248088-70248107 Msa1034690:five_prime_UTR 60.0%
TGTTCCATGCCAGTCGCTGC+TGG + chr7_1:70249277-70249296 None:intergenic 60.0%
GGCATATCCAGTGCAGTCGC+CGG - chr7_1:70249312-70249331 Msa1034690:intron 60.0%
GCATATCCAGTGCAGTCGCC+GGG - chr7_1:70249313-70249332 Msa1034690:intron 60.0%
! GAAACCCTTGGCGCTGGACA+TGG - chr7_1:70249496-70249515 Msa1034690:intron 60.0%
GCGGCATGATACTCTGCTGC+CGG + chr7_1:70249891-70249910 None:intergenic 60.0%
!! TCAACTGCCAAGGTGCTGGG+TGG - chr7_1:70250331-70250350 Msa1034690:intron 60.0%
CCGCTGAAGTGTGCGGTAGA+TGG - chr7_1:70251041-70251060 Msa1034690:intron 60.0%
! CAGAGGGAGGTACACCTCCG+CGG - chr7_1:70248722-70248741 Msa1034690:intron 65.0%
GGAGTGAAGCCAGCAGCGAC+TGG - chr7_1:70249265-70249284 Msa1034690:intron 65.0%
GAAGCCAGCAGCGACTGGCA+TGG - chr7_1:70249270-70249289 Msa1034690:intron 65.0%
AGTACTCCCGGCGACTGCAC+TGG + chr7_1:70249322-70249341 None:intergenic 65.0%
!! GTGCAGTCGCCGGGAGTACT+AGG - chr7_1:70249322-70249341 Msa1034690:intron 65.0%
! ACCCTTGGCGCTGGACATGG+TGG - chr7_1:70249499-70249518 Msa1034690:intron 65.0%
GCCACCATGTCCAGCGCCAA+GGG + chr7_1:70249503-70249522 None:intergenic 65.0%
TGTGGGAAGCGGGATCACGC+GGG + chr7_1:70249681-70249700 None:intergenic 65.0%
GTGTGGGAAGCGGGATCACG+CGG + chr7_1:70249682-70249701 None:intergenic 65.0%
CATGCCGCAGCTCGCGCAAT+CGG - chr7_1:70249903-70249922 Msa1034690:five_prime_UTR 65.0%
! ACCACCGATTGCGCGAGCTG+CGG + chr7_1:70249910-70249929 None:intergenic 65.0%
CCTTGCACCACCCAGCACCT+TGG + chr7_1:70250341-70250360 None:intergenic 65.0%
!! CCAAGGTGCTGGGTGGTGCA+AGG - chr7_1:70250338-70250357 Msa1034690:intron 65.0%
ACACTTCAGCGGACGCTGGG+AGG + chr7_1:70251033-70251052 None:intergenic 65.0%
CGCACACTTCAGCGGACGCT+GGG + chr7_1:70251036-70251055 None:intergenic 65.0%
CCAGCGTCCGCTGAAGTGTG+CGG - chr7_1:70251034-70251053 Msa1034690:intron 65.0%
GGCCACCATGTCCAGCGCCA+AGG + chr7_1:70249504-70249523 None:intergenic 70.0%
GAGTCGCGCGTAGGCCTTCC+AGG + chr7_1:70250130-70250149 None:intergenic 70.0%
CCGCACACTTCAGCGGACGC+TGG + chr7_1:70251037-70251056 None:intergenic 70.0%
GCCGCAGCTCGCGCAATCGG+TGG - chr7_1:70249906-70249925 Msa1034690:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 70245784 70251609 70245784 ID=Msa1034690;Name=Msa1034690
chr7_1 mRNA 70245784 70251609 70245784 ID=Msa1034690-mRNA-1;Parent=Msa1034690;Name=Msa1034690-mRNA-1;_AED=0.10;_eAED=0.10;_QI=1612|0.92|0.93|1|0.78|0.73|15|440|386
chr7_1 exon 70245784 70246586 70245784 ID=Msa1034690-mRNA-1:exon:16766;Parent=Msa1034690-mRNA-1
chr7_1 exon 70246687 70246775 70246687 ID=Msa1034690-mRNA-1:exon:16765;Parent=Msa1034690-mRNA-1
chr7_1 exon 70246895 70247112 70246895 ID=Msa1034690-mRNA-1:exon:16764;Parent=Msa1034690-mRNA-1
chr7_1 exon 70247211 70247334 70247211 ID=Msa1034690-mRNA-1:exon:16763;Parent=Msa1034690-mRNA-1
chr7_1 exon 70247447 70247514 70247447 ID=Msa1034690-mRNA-1:exon:16762;Parent=Msa1034690-mRNA-1
chr7_1 exon 70247616 70248168 70247616 ID=Msa1034690-mRNA-1:exon:16761;Parent=Msa1034690-mRNA-1
chr7_1 exon 70248290 70248418 70248290 ID=Msa1034690-mRNA-1:exon:16760;Parent=Msa1034690-mRNA-1
chr7_1 exon 70248569 70248676 70248569 ID=Msa1034690-mRNA-1:exon:16759;Parent=Msa1034690-mRNA-1
chr7_1 exon 70248795 70248886 70248795 ID=Msa1034690-mRNA-1:exon:16758;Parent=Msa1034690-mRNA-1
chr7_1 exon 70248988 70249036 70248988 ID=Msa1034690-mRNA-1:exon:16757;Parent=Msa1034690-mRNA-1
chr7_1 exon 70249530 70249751 70249530 ID=Msa1034690-mRNA-1:exon:16756;Parent=Msa1034690-mRNA-1
chr7_1 exon 70249837 70250078 70249837 ID=Msa1034690-mRNA-1:exon:16755;Parent=Msa1034690-mRNA-1
chr7_1 exon 70250410 70250620 70250410 ID=Msa1034690-mRNA-1:exon:16754;Parent=Msa1034690-mRNA-1
chr7_1 exon 70251077 70251150 70251077 ID=Msa1034690-mRNA-1:exon:16753;Parent=Msa1034690-mRNA-1
chr7_1 exon 70251379 70251609 70251379 ID=Msa1034690-mRNA-1:exon:16752;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70251379 70251609 70251379 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70251077 70251150 70251077 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70250410 70250620 70250410 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70249837 70250078 70249837 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70249530 70249751 70249530 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70248988 70249036 70248988 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70248795 70248886 70248795 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70248569 70248676 70248569 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70248290 70248418 70248290 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 five_prime_UTR 70247915 70248168 70247915 ID=Msa1034690-mRNA-1:five_prime_utr;Parent=Msa1034690-mRNA-1
chr7_1 CDS 70247616 70247914 70247616 ID=Msa1034690-mRNA-1:cds;Parent=Msa1034690-mRNA-1
chr7_1 CDS 70247447 70247514 70247447 ID=Msa1034690-mRNA-1:cds;Parent=Msa1034690-mRNA-1
chr7_1 CDS 70247211 70247334 70247211 ID=Msa1034690-mRNA-1:cds;Parent=Msa1034690-mRNA-1
chr7_1 CDS 70246895 70247112 70246895 ID=Msa1034690-mRNA-1:cds;Parent=Msa1034690-mRNA-1
chr7_1 CDS 70246687 70246775 70246687 ID=Msa1034690-mRNA-1:cds;Parent=Msa1034690-mRNA-1
chr7_1 CDS 70246224 70246586 70246224 ID=Msa1034690-mRNA-1:cds;Parent=Msa1034690-mRNA-1
chr7_1 three_prime_UTR 70245784 70246223 70245784 ID=Msa1034690-mRNA-1:three_prime_utr;Parent=Msa1034690-mRNA-1
Gene Sequence

>Msa1034690

ATGTGCAAAACATTATTGAAACCCTTGGCGCTGGACATGGTGGCCGAGTCTCACTTACTCGCAGCTATCATCATGCACTTGAGGCTTCCATTTCTCGTAACTTTTCTGACAATGGATGCATCGCATGTATGTGTCATAACACTGATGGACTTTACAGTGCTAAGCAGACTGCTGTTGTGCGGGCCTCTGATGATTTTTACCCGCGTGATCCCGCTTCCCACACCATCCATATTTCGTCTGTTGCATACAATTCACTTTTCCTTGGAGAGTTTATGCAGCCAGATTGGGACATGTTCCATAGTCTACATCCGGCAGCAGAGTATCATGCCGCAGCTCGCGCAATCGGTGGTTGTCCAATTTATGTCAGGCAACCACAATTTTGACCTTCTTAGGAAGTTGGTTCTTCCTGATGGTTCTGTTCTCCGTGCTCAATTACCTGGAAGGCCTACGCGCGACTCACTCTTTGTTGATCCGGCAAGAGATAGGACCAGCTTGCTAAAAATATGGAACATGAACAAATGTACTGGAGTTGTTGGTGTATTCAACTGCCAAGGTGCTGGGTGGTGCAAGGTAGAAAAGAAAACTCGCATCCATGATACATCTCCCGGTACACTTACTAGCTCTGTTTGTGCCTCTGATGTTGATCTCATCAACCAAGTAGCTGGTGCTGAATGGCATGGAGAGAATATTGTTTATGCTTACAGATCAGGCGAGGCGATTCGATTACCGAAAGGGGCTTCGATTCCAGTAACACTAAAGGTTCTGGAGTTTGAACTTTTCCATTTCTGTCCAATCCAAGAAATAGCGCCTGGTATATCATTTGCAGCAATAGGCCTGATGGACATGTTCAACACAGGAGGAGCTGTAGAAGAGGTTGAAATCCATAGAGCCTCCGACAACAAACAAGAGCTATTTGATGGTGAGGTTGTTTCGGAACTGACTACTTCGCTCAGTCCCAACCGAACGACAACCGCAACTATTGCTTTGAAAGTGAGAGGAAGTGGCAAGTTTGGAGTTTACTCCTCCCAGCGTCCGCTGAAGTGTGCGGTAGATGGCACCGAAACCGATTTCGACTATAACTCAGAAAATGGGTTGACAACCTTCTACATCCCAGTTCCTCAAGAGGACATGTATAAATGGTTAATAGAGATCCAAGTTTAA
Protein sequence

>Msa1034690

MCKTLLKPLALDMVAESHLLAAIIMHLRLPFLVTFLTMDASHVCVITLMDFTVLSRLLLCGPLMIFTRVIPLPTPSIFRLLHTIHFSLESLCSQIGTCSIVYIRQQSIMPQLAQSVVVQFMSGNHNFDLLRKLVLPDGSVLRAQLPGRPTRDSLFVDPARDRTSLLKIWNMNKCTGVVGVFNCQGAGWCKVEKKTRIHDTSPGTLTSSVCASDVDLINQVAGAEWHGENIVYAYRSGEAIRLPKGASIPVTLKVLEFELFHFCPIQEIAPGISFAAIGLMDMFNTGGAVEEVEIHRASDNKQELFDGEVVSELTTSLSPNRTTTATIALKVRGSGKFGVYSSQRPLKCAVDGTETDFDYNSENGLTTFYIPVPQEDMYKWLIEIQV*