AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0524710

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524710 MtrunA17_Chr3g0138671 97.792 634 4 1 1 634 1 624 0.0 1277
Msa0524710 MtrunA17_Chr4g0063141 50.203 492 237 4 20 509 23 508 1.91e-165 496
Msa0524710 MtrunA17_Chr8g0356081 41.282 671 331 10 23 634 20 686 5.82e-162 480
Msa0524710 MtrunA17_Chr2g0277651 45.437 504 266 5 17 519 39 534 4.07e-145 441
Msa0524710 MtrunA17_Chr1g0148981 42.442 516 233 6 39 496 48 557 5.57e-131 409
Msa0524710 MtrunA17_Chr3g0138131 49.081 381 185 4 40 417 59 433 8.31e-121 367
Msa0524710 MtrunA17_Chr2g0286031 50.538 372 172 2 131 502 21 380 1.44e-116 363
Msa0524710 MtrunA17_Chr5g0434371 36.152 473 283 9 40 502 78 541 8.39e-91 299
Msa0524710 MtrunA17_Chr4g0063071 28.846 260 172 4 269 519 5 260 3.92e-29 116
Msa0524710 MtrunA17_Chr2g0286041 46.903 113 59 1 13 125 21 132 1.94e-27 107
Msa0524710 MtrunA17_Chr4g0062561 27.650 217 149 3 79 295 4 212 9.01e-19 90.9
Msa0524710 MtrunA17_Chr4g0062571 28.571 217 142 4 79 295 4 207 1.65e-18 85.1
Msa0524710 MtrunA17_Chr4g0001481 25.123 203 149 2 243 442 380 582 2.39e-16 83.2
Msa0524710 MtrunA17_Chr4g0073941 21.996 491 292 15 39 442 91 577 2.57e-16 82.8
Msa0524710 MtrunA17_Chr4g0063081 31.694 183 115 4 56 234 3 179 7.66e-15 73.6
Msa0524710 MtrunA17_Chr8g0347121 23.153 203 153 2 243 442 337 539 6.39e-14 75.1
Msa0524710 MtrunA17_Chr1g0158861 21.145 454 280 14 92 472 143 591 7.77e-14 75.1
Msa0524710 MtrunA17_Chr1g0181121 22.831 219 165 3 241 455 314 532 2.92e-13 73.2
Msa0524710 MtrunA17_Chr4g0028861 22.120 217 165 3 243 455 396 612 2.66e-12 70.1
Msa0524710 MtrunA17_Chr7g0275581 25.980 204 146 3 243 442 358 560 5.15e-12 68.9
Msa0524710 MtrunA17_Chr3g0125651 22.167 203 155 2 243 442 315 517 9.53e-12 68.2
Msa0524710 MtrunA17_Chr3g0126541 22.059 204 154 3 243 442 353 555 1.07e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0524710 AT4G32650.3 59.048 630 243 7 8 633 42 660 0.0 704
Msa0524710 AT4G32650.1 58.216 639 235 8 8 633 42 661 0.0 703
Msa0524710 AT4G32650.2 59.567 554 212 4 8 551 42 593 0.0 642
Msa0524710 AT5G46240.1 42.057 661 330 8 15 632 23 673 3.56e-166 491
Msa0524710 AT2G26650.1 44.580 572 276 8 20 559 26 588 1.22e-161 485
Msa0524710 AT4G18290.1 49.068 483 242 3 21 503 29 507 6.46e-150 450
Msa0524710 AT4G18290.2 49.068 483 242 3 21 503 40 518 8.57e-150 450
Msa0524710 AT4G32500.1 45.674 497 260 4 20 511 43 534 1.03e-146 447
Msa0524710 AT2G25600.1 45.766 496 259 5 20 511 47 536 5.57e-145 443
Msa0524710 AT4G22200.2 45.248 484 260 5 17 498 39 519 1.35e-135 410
Msa0524710 AT4G22200.1 45.436 482 258 5 17 496 39 517 1.72e-133 410
Msa0524710 AT2G26650.2 44.444 486 231 7 101 584 1 449 1.43e-131 404
Msa0524710 AT3G02850.3 35.667 457 277 7 44 491 74 522 1.27e-92 298
Msa0524710 AT3G02850.2 35.667 457 277 7 44 491 74 522 1.60e-91 299
Msa0524710 AT3G02850.1 35.667 457 277 7 44 491 74 522 5.49e-91 300
Msa0524710 AT5G37500.4 35.730 459 278 7 42 491 55 505 1.19e-88 291
Msa0524710 AT5G37500.1 35.730 459 278 7 42 491 55 505 4.95e-88 291
Msa0524710 AT5G37500.2 35.730 459 278 7 42 491 55 505 8.69e-88 291
Msa0524710 AT5G37500.3 35.477 451 274 7 50 491 9 451 7.26e-85 282
Msa0524710 AT1G19780.2 24.390 205 152 2 241 442 164 368 2.39e-15 79.7
Msa0524710 AT1G19780.1 24.390 205 152 2 241 442 375 579 4.04e-15 79.7
Msa0524710 AT1G15990.1 23.902 205 153 2 241 442 369 573 9.88e-15 78.2
Msa0524710 AT5G57940.3 23.645 203 152 2 243 442 360 562 1.03e-13 75.1
Msa0524710 AT5G57940.1 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa0524710 AT5G57940.2 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa0524710 AT2G46430.1 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa0524710 AT2G46430.2 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa0524710 AT4G30560.5 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa0524710 AT4G30560.2 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa0524710 AT4G30560.3 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa0524710 AT4G30560.1 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa0524710 AT4G30560.4 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa0524710 AT2G23980.6 22.439 205 156 2 241 442 354 558 5.94e-12 69.3
Msa0524710 AT2G23980.9 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0524710 AT2G23980.10 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0524710 AT2G23980.1 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0524710 AT2G23980.4 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0524710 AT2G23980.5 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0524710 AT2G23980.3 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0524710 AT2G23980.2 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0524710 AT2G23980.8 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0524710 AT2G23980.7 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0524710 AT5G53130.1 21.296 216 162 3 230 442 347 557 3.59e-11 67.0
Msa0524710 AT1G01340.1 23.039 204 152 3 243 442 337 539 7.05e-11 65.9
Msa0524710 AT1G01340.2 23.267 202 150 3 245 442 344 544 7.65e-11 65.9

Find 138 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGCATATTTCTACATTT+TGG 0.153780 3_4:-78172412 Msa0524710:CDS
CTTCCCAATCCACGTGTTTC+CGG 0.184950 3_4:+78174238 None:intergenic
GCCTTCCCATCTTCATTAAA+TGG 0.195859 3_4:+78171507 Msa0524700:intron
ATAACTCATCGTCCTCTCTT+AGG 0.208567 3_4:+78168916 Msa0524700:intron
AGATTGTAATTGTCTCTATT+TGG 0.212418 3_4:+78168874 Msa0524700:intron
CTTCTACTTCTCACTGTATA+AGG 0.266754 3_4:+78171582 Msa0524700:intron
CCCAACGAAAACATTGAAAA+TGG 0.273238 3_4:-78169332 Msa0524710:CDS
CTGTATGCAGAGAACAAGTT+TGG 0.290869 3_4:-78168996 Msa0524710:intron
CAGTTTATGAAGGGCCTAAA+AGG 0.301144 3_4:-78171178 Msa0524710:CDS
ATTTGGTCCTTCAAACCTTC+TGG 0.317911 3_4:+78172751 None:intergenic
GACATTCTTTGTGGCTTACT+TGG 0.330293 3_4:-78175640 Msa0524710:CDS
TTCCCAATCCACGTGTTTCC+GGG 0.336300 3_4:+78174239 None:intergenic
GTACCTATATCTGCGATCAT+AGG 0.339717 3_4:+78175892 None:intergenic
TTAAGGTTACCTTCTTCATA+TGG 0.341526 3_4:+78170213 Msa0524700:intron
CACGACAGAGGGGAAGTCTT+TGG 0.343113 3_4:-78174694 Msa0524710:CDS
GGAAGCATGGTAGGAGAAAT+AGG 0.351752 3_4:-78171627 Msa0524710:CDS
AACAGAATTTCTGAGTGATT+TGG 0.351877 3_4:-78171128 Msa0524710:CDS
ATTTCTCCTACCATGCTTCC+AGG 0.352995 3_4:+78171630 Msa0524700:intron
CCGTACAATCCACAGGATTA+AGG 0.353518 3_4:+78170196 Msa0524700:intron
GGGCCTAAAAGGCGGGGTGC+TGG 0.361204 3_4:-78171167 Msa0524710:CDS
CATAATCCTGACATTCTTTG+TGG 0.363443 3_4:-78175649 Msa0524710:CDS
ACCTGATAGCAATCTTCTTA+TGG 0.365107 3_4:+78175589 None:intergenic
AAAAGATCTTCGACTGAATC+TGG 0.370035 3_4:+78169284 Msa0524700:intron
GCTTTCAGAGAGATGTCAAT+TGG 0.377539 3_4:-78175720 Msa0524710:CDS
GACGTTCAAGTGGCGAAATA+AGG 0.388506 3_4:-78176006 Msa0524710:CDS
ATACCGGCTCTAATTGCTTT+AGG 0.395979 3_4:+78172661 None:intergenic
GTGAAACCATTTAATGAAGA+TGG 0.396083 3_4:-78171513 Msa0524710:CDS
AAGAGGAAGCAAAATTCTTA+TGG 0.402959 3_4:-78168970 Msa0524710:CDS
CTTCTCACTGTATAAGGTTG+TGG 0.405620 3_4:+78171588 Msa0524700:intron
TTTGGTCCTTCAAACCTTCT+GGG 0.406751 3_4:+78172752 None:intergenic
GGCCTCACTGCATATATTAT+CGG 0.406985 3_4:-78174059 Msa0524710:CDS
TTTAAAGAATGGGTCTGAAC+AGG 0.414172 3_4:-78172274 Msa0524710:intron
AGTTGGTATATCTGCTGAAA+TGG 0.417497 3_4:+78174733 None:intergenic
CACCCGGAAACACGTGGATT+GGG 0.429696 3_4:-78174241 Msa0524710:CDS
AGGTCGAAGTAACCTTCATC+AGG 0.430867 3_4:+78175935 None:intergenic
TCACCCGGAAACACGTGGAT+TGG 0.431953 3_4:-78174242 Msa0524710:CDS
TAACTCATCGTCCTCTCTTA+GGG 0.435806 3_4:+78168917 Msa0524700:intron
AAACACGTGGATTGGGAAGC+AGG 0.440143 3_4:-78174234 Msa0524710:CDS
CTCCCTATGATCGCAGATAT+AGG 0.444080 3_4:-78175895 Msa0524710:intron
GCTGTGTATGTGCCAACATT+TGG 0.448804 3_4:+78172734 None:intergenic
TTATTCTACTCAGTTTATGA+AGG 0.454225 3_4:-78171188 Msa0524710:intron
TATCGGAAACATGACAAATC+TGG 0.454837 3_4:-78174042 Msa0524710:CDS
GATGATCGATTCGTATAAGC+TGG 0.455732 3_4:+78171553 Msa0524700:intron
ACCATAAGAAGATTGCTATC+AGG 0.463306 3_4:-78175590 Msa0524710:intron
CTCCATAGCCAACAGTGGTA+AGG 0.464281 3_4:+78174144 None:intergenic
GAAAAGATGCTGAGCAATAC+CGG 0.467875 3_4:+78172645 None:intergenic
TTATGAAGGGCCTAAAAGGC+GGG 0.476754 3_4:-78171174 Msa0524710:CDS
TTCTGAACATGCTTAGACTC+TGG 0.476763 3_4:-78174669 Msa0524710:CDS
TACCTATATCTGCGATCATA+GGG 0.482588 3_4:+78175893 None:intergenic
TTCTCACTGTATAAGGTTGT+GGG 0.485398 3_4:+78171589 Msa0524700:intron
TTTGGCACTAATCCTGATGA+AGG 0.487192 3_4:-78175947 Msa0524710:CDS
CTATTTGCAGTGCATTTCAC+AGG 0.490090 3_4:-78174299 Msa0524710:CDS
CTTTCAGAGAGATGTCAATT+GGG 0.493184 3_4:-78175719 Msa0524710:CDS
TCATCATCATTTCAAGCAGC+TGG 0.493382 3_4:-78171535 Msa0524710:CDS
ATTGTAACCCTTACCACTGT+TGG 0.494420 3_4:-78174152 Msa0524710:CDS
ACCAAAATGTAGAAATATGC+CGG 0.496163 3_4:+78172411 None:intergenic
TGCTTAGACTCTGGCGATTG+AGG 0.497213 3_4:-78174660 Msa0524710:CDS
CGGCTCTAATTGCTTTAGGC+AGG 0.497294 3_4:+78172665 None:intergenic
ACCCTTACCACTGTTGGCTA+TGG 0.497731 3_4:-78174146 Msa0524710:CDS
AGTAAGCCACAAAGAATGTC+AGG 0.501626 3_4:+78175643 None:intergenic
AGCAAAATTCTTATGGCTGA+TGG 0.505553 3_4:-78168963 Msa0524710:CDS
GATTATGTCAAATGCAAAGA+AGG 0.505830 3_4:+78175665 None:intergenic
CAAACATTTATTCTTCCCCA+TGG 0.507553 3_4:-78174773 Msa0524710:CDS
AAGCATAGGAGTGTCGGATC+GGG 0.514286 3_4:-78174200 Msa0524710:CDS
ACAGGCTAGAGAAAGACATC+AGG 0.515409 3_4:-78174477 Msa0524710:intron
ACAGCAAGAAGAAGTGCTAC+AGG 0.515890 3_4:-78172689 Msa0524710:CDS
TGGACTCCCAGAAGGTTTGA+AGG 0.517610 3_4:-78172758 Msa0524710:CDS
CCTTAATCCTGTGGATTGTA+CGG 0.517898 3_4:-78170196 Msa0524710:CDS
AAATTTATTTAAAGGAGTCT+CGG 0.522060 3_4:-78172602 Msa0524710:CDS
TAAAAGACTGCTAGAAATTG+AGG 0.525967 3_4:+78175976 None:intergenic
CTAGATCCTGGAAGCATGGT+AGG 0.533447 3_4:-78171636 Msa0524710:CDS
GAAGAAAATCCATATGAAGA+AGG 0.533805 3_4:-78170222 Msa0524710:CDS
GCAAACGTTCCTAGTGGTAT+TGG 0.536240 3_4:-78175778 Msa0524710:CDS
TGAAACCATTTAATGAAGAT+GGG 0.540227 3_4:-78171512 Msa0524710:CDS
CAGATATACCAACTTATAGC+AGG 0.540823 3_4:-78174724 Msa0524710:CDS
CATCTTGCAAAATGAGATGC+CGG 0.542003 3_4:-78172430 Msa0524710:CDS
AAGATGATGTCAACCTTTGA+CGG 0.542979 3_4:+78172447 None:intergenic
GTGGATTGGGAAGCAGGTAG+AGG 0.543328 3_4:-78174228 Msa0524710:CDS
ACCATTTAATGAAGATGGGA+AGG 0.544586 3_4:-78171508 Msa0524710:CDS
TCCATAGCCAACAGTGGTAA+GGG 0.545277 3_4:+78174145 None:intergenic
AACGTTCCTAGTGGTATTGG+TGG 0.546659 3_4:-78175775 Msa0524710:CDS
GACTAGGCTTGACAGTGGAC+TGG 0.551907 3_4:+78169385 Msa0524700:intron
TATTCTACTCAGTTTATGAA+GGG 0.552678 3_4:-78171187 Msa0524710:intron
CTCAGAAATTCTGTTACATA+CGG 0.553507 3_4:+78171136 Msa0524700:intron
TGTTTCCGGGTGATTTGTGA+TGG 0.553957 3_4:+78174252 None:intergenic
CAGGCAAATCACACGACAGA+GGG 0.557635 3_4:-78174705 Msa0524710:CDS
TAAGCATAGGAGTGTCGGAT+CGG 0.559099 3_4:-78174201 Msa0524710:CDS
TCAGGATTAGTGCCAAATGC+TGG 0.561152 3_4:+78175953 None:intergenic
AGAGTGGAAGCTAGATCCAT+GGG 0.562419 3_4:+78174757 None:intergenic
TCTGGTAGGATAATGAGCTT+TGG 0.563514 3_4:+78169302 Msa0524700:intron
GCAGCATCCGACACAAAATG+AGG 0.564454 3_4:-78170274 Msa0524710:intron
TCTCTGAAAGCTAACTCGAA+TGG 0.564788 3_4:+78175732 None:intergenic
TATTGGTGGTGTACTCAGCA+TGG 0.565665 3_4:-78175761 Msa0524710:CDS
AAGTGGCGAAATAAGGAACT+TGG 0.565700 3_4:-78175999 Msa0524710:CDS
ACCACGAACCTGAGTAAAGT+TGG 0.575334 3_4:+78171476 Msa0524700:intron
GTTACACTTACTCCATGTAC+TGG 0.577805 3_4:-78174178 Msa0524710:CDS
AATTATCACCAACTTTACTC+AGG 0.579672 3_4:-78171484 Msa0524710:intron
GAACGTCTTCTAACTAGAGA+TGG 0.581226 3_4:+78176022 None:intergenic
CAGAGTGGAAGCTAGATCCA+TGG 0.582011 3_4:+78174756 None:intergenic
AGATGATGTCAACCTTTGAC+GGG 0.585146 3_4:+78172448 None:intergenic
TCTTCTTATGGTCATCAACA+AGG 0.589359 3_4:+78175601 None:intergenic
CAAACTAGATCCTGGAAGCA+TGG 0.592017 3_4:-78171640 Msa0524710:CDS
ATTGGTGGTGTACTCAGCAT+GGG 0.592623 3_4:-78175760 Msa0524710:CDS
AGATCTATGCGCCCTAAGAG+AGG 0.595067 3_4:-78168928 Msa0524710:CDS
CTGCCTAAAGCAATTAGAGC+CGG 0.596573 3_4:-78172664 Msa0524710:CDS
GATCTTCGACTGAATCTGGT+AGG 0.597089 3_4:+78169288 Msa0524700:intron
ATGATCGATTCGTATAAGCT+GGG 0.597906 3_4:+78171554 Msa0524700:intron
GCTTTCCATCACAAATCACC+CGG 0.601397 3_4:-78174257 Msa0524710:CDS
CTCTGTCAGAACCTTTGCCA+TGG 0.604556 3_4:-78174009 Msa0524710:intron
TTTCGTTGGGGTGATGTCCG+TGG 0.604677 3_4:+78169345 Msa0524700:intron
TTTATGAAGGGCCTAAAAGG+CGG 0.604730 3_4:-78171175 Msa0524710:CDS
TGCAGAAAATACAACGGAGA+AGG 0.604909 3_4:-78174114 Msa0524710:CDS
AGCAGAATACTACCCGTCAA+AGG 0.606939 3_4:-78172460 Msa0524710:CDS
AGGTTTGAAGGACCAAATGT+TGG 0.607435 3_4:-78172746 Msa0524710:CDS
GTGATTTGCCTGCTATAAGT+TGG 0.611642 3_4:+78174716 None:intergenic
TTACTGACCGTACAATCCAC+AGG 0.616689 3_4:+78170189 Msa0524700:intron
AACAAGATCAGCAATCAACA+TGG 0.622158 3_4:+78175695 None:intergenic
CTAGTTAGAAGACGTTCAAG+TGG 0.624136 3_4:-78176016 Msa0524710:CDS
GGTTACAATAGACCAGTACA+TGG 0.630208 3_4:+78174166 None:intergenic
AGAAGGTAACCTTAATCCTG+TGG 0.632695 3_4:-78170205 Msa0524710:CDS
CGGAAACATGACAAATCTGG+TGG 0.634913 3_4:-78174039 Msa0524710:CDS
GTGTTAGTGAGCTCTTCTCA+AGG 0.639360 3_4:-78174636 Msa0524710:intron
TCTGAGTGATTTGGAAGACG+AGG 0.639686 3_4:-78171119 Msa0524710:intron
CAGCATCCGACACAAAATGA+GGG 0.640928 3_4:-78170273 Msa0524710:CDS
CCGATTAGAGTCAAAATCCA+CGG 0.641853 3_4:-78169362 Msa0524710:CDS
TATGAAGGGCCTAAAAGGCG+GGG 0.644259 3_4:-78171173 Msa0524710:CDS
ACAAATCACCCGGAAACACG+TGG 0.645837 3_4:-78174247 Msa0524710:CDS
AGTACACCACCAATACCACT+AGG 0.675337 3_4:+78175769 None:intergenic
CAGGCTAGAGAAAGACATCA+GGG 0.679388 3_4:-78174476 Msa0524710:CDS
GCAGGCAAATCACACGACAG+AGG 0.680984 3_4:-78174706 Msa0524710:CDS
TAAATCTCCATAGCCAACAG+TGG 0.683311 3_4:+78174139 None:intergenic
TTTACATGCAGAAAATACAA+CGG 0.691098 3_4:-78174120 Msa0524710:CDS
TATCTGCTGAAATGGCAGAG+TGG 0.713852 3_4:+78174741 None:intergenic
ATTGTGGCAAACGTTCCTAG+TGG 0.719275 3_4:-78175784 Msa0524710:CDS
ATCGGGACTAGGCTTGACAG+TGG 0.726298 3_4:+78169380 Msa0524700:intron
AGGCAAATCACACGACAGAG+GGG 0.735317 3_4:-78174704 Msa0524710:CDS
TTCCGATAATATATGCAGTG+AGG 0.738037 3_4:+78174057 None:intergenic
GAGTGGAAGCTAGATCCATG+GGG 0.775567 3_4:+78174758 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAATAATTGTATTA+AGG + chr3_4:78169028-78169047 Msa0524700:intron 10.0%
!!! ATCAATAGTATTAAAATTTT+CGG + chr3_4:78169495-78169514 Msa0524700:intron 10.0%
!! GAAAAAACAAATTTATTTAA+AGG - chr3_4:78172268-78172287 Msa0524710:intron 10.0%
!!! AAACAGATTTATTTTAATTT+TGG - chr3_4:78174524-78174543 Msa0524710:intron 10.0%
!!! GAAAATTTTAATACTATTGA+TGG - chr3_4:78169494-78169513 Msa0524710:intron 15.0%
!! AAAAAAAAAAAAACTACCAA+GGG + chr3_4:78169543-78169562 Msa0524700:intron 15.0%
!! AAAAAAAAAAAAAACTACCA+AGG + chr3_4:78169544-78169563 Msa0524700:intron 15.0%
!!! AGTATATATTTCATAGTTTT+TGG + chr3_4:78170032-78170051 Msa0524700:intron 15.0%
!! AAACTTAAATTCATTTCTTT+AGG - chr3_4:78170282-78170301 Msa0524710:intron 15.0%
!!! AATTTTTTGAAGATTTTTCA+TGG - chr3_4:78170894-78170913 Msa0524710:intron 15.0%
!!! CGTTTTTAATATAAGAAATA+AGG + chr3_4:78171418-78171437 Msa0524700:intron 15.0%
!! GCATATAATTATAAGTATTT+CGG + chr3_4:78172052-78172071 Msa0524700:three_prime_UTR 15.0%
!!! ATATTGTAATATTTTGTTGA+AGG + chr3_4:78172089-78172108 Msa0524700:three_prime_UTR 15.0%
!! TTATTATAATTTCTGAACTA+TGG - chr3_4:78172836-78172855 Msa0524710:intron 15.0%
!! AAATACTTTGTATAAAACAT+TGG + chr3_4:78173149-78173168 None:intergenic 15.0%
!! AACATTAATATAGAAAGATA+TGG + chr3_4:78173661-78173680 None:intergenic 15.0%
!! AATAGAATATATAAGTATCA+TGG - chr3_4:78174282-78174301 Msa0524710:CDS 15.0%
!!! AAAAAATTAAAGACGTTTTA+CGG - chr3_4:78174458-78174477 Msa0524710:CDS 15.0%
!! TTAAACAAAAAGTTATTAAG+TGG + chr3_4:78174947-78174966 None:intergenic 15.0%
!!! TTTTTGTGCATTTATATATT+AGG + chr3_4:78175447-78175466 None:intergenic 15.0%
!! ATTAAAATGAAATCAAAGAA+GGG + chr3_4:78175769-78175788 None:intergenic 15.0%
!! AATTAAAATGAAATCAAAGA+AGG + chr3_4:78175770-78175789 None:intergenic 15.0%
!!! GAGCAATAACATATTTTTTT+AGG + chr3_4:78168966-78168985 Msa0524700:intron 20.0%
!! TTATCTATACCAATATACAA+AGG - chr3_4:78169595-78169614 Msa0524710:intron 20.0%
!! TATCTATACCAATATACAAA+GGG - chr3_4:78169596-78169615 Msa0524710:intron 20.0%
!!! TACTTTCAGTTTTGTTTAAT+TGG - chr3_4:78169977-78169996 Msa0524710:intron 20.0%
!!! GATTATTGAGTTTTCATAAT+AGG - chr3_4:78170077-78170096 Msa0524710:intron 20.0%
!!! ATTTCTTTAGGATATTTTTG+TGG - chr3_4:78170294-78170313 Msa0524710:intron 20.0%
!!! TTTCTTTAGGATATTTTTGT+GGG - chr3_4:78170295-78170314 Msa0524710:intron 20.0%
!!! ATTTGATGGTATATCTTATT+TGG + chr3_4:78170501-78170520 Msa0524700:intron 20.0%
!!! TTTTATATGCTGTTTAACAT+CGG - chr3_4:78170798-78170817 Msa0524710:intron 20.0%
!! AATCTTCAAAAAATTTACCA+TGG + chr3_4:78170889-78170908 Msa0524700:intron 20.0%
!! AAATCTAATCTACTTTAATC+TGG - chr3_4:78171124-78171143 Msa0524710:CDS 20.0%
!! AAAAACTTAAAGTTAGGAAA+TGG + chr3_4:78171320-78171339 Msa0524700:intron 20.0%
!! TAGCATAAAAACTTAAAGTT+AGG + chr3_4:78171326-78171345 Msa0524700:intron 20.0%
!! AAAGTTATGAAAGAATTTCA+CGG + chr3_4:78171573-78171592 Msa0524700:intron 20.0%
!! TTTGAGTAAAAAGAAAACTT+AGG + chr3_4:78171612-78171631 Msa0524700:intron 20.0%
!! AATAACTTCGATATTTCAAT+TGG + chr3_4:78171683-78171702 Msa0524700:intron 20.0%
!! TAGGGAAATAAAAATGTAAA+GGG - chr3_4:78171885-78171904 Msa0524710:intron 20.0%
!! AAATTAAGCAAATCTACTAT+TGG + chr3_4:78171935-78171954 Msa0524700:three_prime_UTR 20.0%
!! AAATTTATTTAAAGGAGTCT+CGG - chr3_4:78172276-78172295 Msa0524710:CDS 20.0%
!!! ATGTGTTGATTTTAAAGAAT+GGG - chr3_4:78172594-78172613 Msa0524710:CDS 20.0%
!! CTTGTATATTTAGAAATTTC+AGG + chr3_4:78173545-78173564 None:intergenic 20.0%
!! CTGAAATTTCTAAATATACA+AGG - chr3_4:78173543-78173562 Msa0524710:intron 20.0%
!!! TATTGGTGATTGAAATTTAA+AGG + chr3_4:78173795-78173814 None:intergenic 20.0%
!! ATTGTATATAAGTTTGTCTA+AGG + chr3_4:78173967-78173986 None:intergenic 20.0%
!! AATACAAATATTAACATCTC+AGG - chr3_4:78174251-78174270 Msa0524710:CDS 20.0%
!! ATACAAATATTAACATCTCA+GGG - chr3_4:78174252-78174271 Msa0524710:CDS 20.0%
!! AATCATGTGATATTACTAAA+TGG - chr3_4:78174993-78175012 Msa0524710:intron 20.0%
!! ATTTATATATTAGGTAAGCA+GGG + chr3_4:78175438-78175457 None:intergenic 20.0%
!!! GTATTGAACATATTAATTTG+TGG - chr3_4:78175856-78175875 Msa0524710:intron 20.0%
! CAAGTTTATGATATAGATTG+TGG - chr3_4:78169078-78169097 Msa0524710:intron 25.0%
! ATCTATACCAATATACAAAG+GGG - chr3_4:78169597-78169616 Msa0524710:intron 25.0%
! GTACAAAATATTGAAGTGAA+GGG + chr3_4:78169766-78169785 Msa0524700:intron 25.0%
! TTTAATCAAGTATTCGTTGT+TGG - chr3_4:78169853-78169872 Msa0524710:intron 25.0%
!! AGTTTGTATGTCTTCATTTT+TGG - chr3_4:78169877-78169896 Msa0524710:intron 25.0%
!!! TATTTGGTGTCAAGATAAAA+GGG + chr3_4:78169922-78169941 Msa0524700:intron 25.0%
! ACAAAACTGAAAGTAAATCT+AGG + chr3_4:78169972-78169991 Msa0524700:intron 25.0%
! CAATAATCATGAGAAAATAG+AGG + chr3_4:78170065-78170084 Msa0524700:intron 25.0%
! GTTTAGTTACAAGTTACAAA+TGG + chr3_4:78170367-78170386 Msa0524700:intron 25.0%
! ACCATCAAATTGTCTAATTT+AGG - chr3_4:78170511-78170530 Msa0524710:intron 25.0%
! ACCTAAATTAGACAATTTGA+TGG + chr3_4:78170515-78170534 Msa0524700:intron 25.0%
! TTTACATGCAGAAAATACAA+CGG - chr3_4:78170758-78170777 Msa0524710:intron 25.0%
!!! ATTTTTGAGATACTTACAGT+GGG + chr3_4:78171074-78171093 Msa0524700:intron 25.0%
!!! TATTTTTGAGATACTTACAG+TGG + chr3_4:78171075-78171094 Msa0524700:intron 25.0%
!!! TAGTTTGTTAGTTTGTTTTC+CGG + chr3_4:78171173-78171192 Msa0524700:intron 25.0%
!! TTCTAGTATATTTGTTGCAA+TGG + chr3_4:78171198-78171217 Msa0524700:intron 25.0%
! ATACTACAAAGGAGTAAAAA+AGG - chr3_4:78171244-78171263 Msa0524710:intron 25.0%
! TACTACAAAGGAGTAAAAAA+GGG - chr3_4:78171245-78171264 Msa0524710:intron 25.0%
! TTCTTATATTAAAAACGCCA+AGG - chr3_4:78171421-78171440 Msa0524710:intron 25.0%
!! TTTCAATTGGTGAATTTTGA+GGG + chr3_4:78171670-78171689 Msa0524700:intron 25.0%
!! ATTTCAATTGGTGAATTTTG+AGG + chr3_4:78171671-78171690 Msa0524700:intron 25.0%
! GTAGGGAAATAAAAATGTAA+AGG - chr3_4:78171884-78171903 Msa0524710:intron 25.0%
!! AAAAATGTAAAGGGTTTTTC+AGG - chr3_4:78171894-78171913 Msa0524710:intron 25.0%
! TATAATTATATGCTTCACAG+AGG - chr3_4:78172059-78172078 Msa0524710:intron 25.0%
! ATAATTATATGCTTCACAGA+GGG - chr3_4:78172060-78172079 Msa0524710:intron 25.0%
!! AAAAAGAAGTTTTACCATCT+GGG + chr3_4:78172314-78172333 None:intergenic 25.0%
!! AAAAAAGAAGTTTTACCATC+TGG + chr3_4:78172315-78172334 None:intergenic 25.0%
!!! TATTTCTACATTTTGGTATC+TGG - chr3_4:78172473-78172492 Msa0524710:CDS 25.0%
!!! GATGTGTTGATTTTAAAGAA+TGG - chr3_4:78172593-78172612 Msa0524710:CDS 25.0%
!!! AATATGTTTTGAAGTTATGC+AGG + chr3_4:78172884-78172903 None:intergenic 25.0%
! ATCTTAATCAGACAAGTAAA+TGG - chr3_4:78173048-78173067 Msa0524710:intron 25.0%
! TGAAACCATTTAATGAAGAT+GGG - chr3_4:78173366-78173385 Msa0524710:intron 25.0%
! AGAAATTTCAGGAAAAATGT+GGG + chr3_4:78173534-78173553 None:intergenic 25.0%
! TAGAAATTTCAGGAAAAATG+TGG + chr3_4:78173535-78173554 None:intergenic 25.0%
! TTATTCTACTCAGTTTATGA+AGG - chr3_4:78173690-78173709 Msa0524710:intron 25.0%
! TATTCTACTCAGTTTATGAA+GGG - chr3_4:78173691-78173710 Msa0524710:intron 25.0%
! GTGATTGAAATTTAAAGGAA+AGG + chr3_4:78173790-78173809 None:intergenic 25.0%
!!! ACAAAAATTTTAGTAAGGCT+CGG - chr3_4:78173867-78173886 Msa0524710:intron 25.0%
! AAAAGATGCTAAAAAATCCA+TGG - chr3_4:78173912-78173931 Msa0524710:intron 25.0%
!!! TAAAGTCTTTATTTTCTGGA+GGG + chr3_4:78174494-78174513 None:intergenic 25.0%
!!! ATAAAGTCTTTATTTTCTGG+AGG + chr3_4:78174495-78174514 None:intergenic 25.0%
! TCCAGAAAATAAAGACTTTA+TGG - chr3_4:78174494-78174513 Msa0524710:intron 25.0%
! ATTTATGAGCATGATTATGA+GGG - chr3_4:78174812-78174831 Msa0524710:intron 25.0%
!! TAAAAGTTGTTGTAAGTTGA+CGG + chr3_4:78174905-78174924 None:intergenic 25.0%
! ATGACAGTAATATATTGCTA+TGG - chr3_4:78175270-78175289 Msa0524710:intron 25.0%
! AAACTGAAGAAAAAAAACCT+AGG + chr3_4:78175304-78175323 None:intergenic 25.0%
! CATTTATATATTAGGTAAGC+AGG + chr3_4:78175439-78175458 None:intergenic 25.0%
! TAATCCAAAGATAGAAATAG+AGG - chr3_4:78175724-78175743 Msa0524710:CDS 25.0%
! AATCCAAAGATAGAAATAGA+GGG - chr3_4:78175725-78175744 Msa0524710:CDS 25.0%
!!! TTTTTATTATGAAGCACTGT+GGG + chr3_4:78175796-78175815 None:intergenic 25.0%
!!! ATTTTTATTATGAAGCACTG+TGG + chr3_4:78175797-78175816 None:intergenic 25.0%
! AGATTGTAATTGTCTCTATT+TGG + chr3_4:78176007-78176026 None:intergenic 25.0%
TAAAAGACTGCTAGAAATTG+AGG + chr3_4:78168905-78168924 Msa0524700:intron 30.0%
GATTATGTCAAATGCAAAGA+AGG + chr3_4:78169216-78169235 Msa0524700:intron 30.0%
! TTTTGACAAAATGTTACCCT+TGG - chr3_4:78169566-78169585 Msa0524710:intron 30.0%
GTATAGATAACAACTACCAA+GGG + chr3_4:78169585-78169604 Msa0524700:intron 30.0%
!!! ACTTTTGGGTTGGATTTTTT+CGG - chr3_4:78169629-78169648 Msa0524710:intron 30.0%
CAATATTGCTTCTATTGTTG+TGG + chr3_4:78169664-78169683 Msa0524700:intron 30.0%
CACAACAATAGAAGCAATAT+TGG - chr3_4:78169662-78169681 Msa0524710:intron 30.0%
GGTACAAAATATTGAAGTGA+AGG + chr3_4:78169767-78169786 Msa0524700:intron 30.0%
! TTGTACCATTTTATCGTTCA+TGG - chr3_4:78169780-78169799 Msa0524710:intron 30.0%
ATTGTCCATGAACGATAAAA+TGG + chr3_4:78169788-78169807 Msa0524700:intron 30.0%
TCGTTCATGGACAATAAAAA+TGG - chr3_4:78169793-78169812 Msa0524710:intron 30.0%
!! ATTTGGTGTCAAGATAAAAG+GGG + chr3_4:78169921-78169940 Msa0524700:intron 30.0%
!! CTATTTGGTGTCAAGATAAA+AGG + chr3_4:78169923-78169942 Msa0524700:intron 30.0%
AAGACAGTGAAGTAACTATT+TGG + chr3_4:78169938-78169957 Msa0524700:intron 30.0%
TTGTTTAATTGGACAAGCAA+TGG - chr3_4:78169988-78170007 Msa0524710:intron 30.0%
!! ATTTTGAGCTTCACTTTTGT+TGG - chr3_4:78170540-78170559 Msa0524710:intron 30.0%
!!! CACTTTTGTTGGTTTATCAT+AGG - chr3_4:78170551-78170570 Msa0524710:intron 30.0%
CAAAAAATTTACCATGGCAA+AGG + chr3_4:78170883-78170902 Msa0524700:intron 30.0%
!!! ATAGTTTTATGTCTTCCTAG+TGG - chr3_4:78170965-78170984 Msa0524710:intron 30.0%
TAAAGGAAGAAAACACAGTA+AGG - chr3_4:78170992-78171011 Msa0524710:intron 30.0%
CTAATCTACTTTAATCTGGT+TGG - chr3_4:78171128-78171147 Msa0524710:CDS 30.0%
!! TACTTTAATCTGGTTGGTAA+GGG - chr3_4:78171134-78171153 Msa0524710:CDS 30.0%
CTAGAAACTTAAGACTTGAT+TGG - chr3_4:78171212-78171231 Msa0524710:intron 30.0%
GGTTATAAGTGATACTACAA+AGG - chr3_4:78171233-78171252 Msa0524710:intron 30.0%
ACTACAAAGGAGTAAAAAAG+GGG - chr3_4:78171246-78171265 Msa0524710:intron 30.0%
TGAAAGTTGACTAGGATATA+GGG + chr3_4:78171460-78171479 Msa0524700:intron 30.0%
CTGCATTCAAATCTCTATTA+TGG - chr3_4:78171486-78171505 Msa0524710:CDS 30.0%
TTTGAAGAGAGAATTCTGTT+GGG + chr3_4:78171719-78171738 Msa0524700:intron 30.0%
TACTCTATTAACATATTCGG+AGG + chr3_4:78171867-78171886 Msa0524700:intron 30.0%
TCCGAATATGTTAATAGAGT+AGG - chr3_4:78171866-78171885 Msa0524710:intron 30.0%
CCCTACTCTATTAACATATT+CGG + chr3_4:78171870-78171889 Msa0524700:intron 30.0%
CCGAATATGTTAATAGAGTA+GGG - chr3_4:78171867-78171886 Msa0524710:intron 30.0%
TTACAATATGCGAGCAAAAA+TGG - chr3_4:78172100-78172119 Msa0524710:intron 30.0%
!!! TTGTTTTTTCAACTACGTTG+TGG + chr3_4:78172258-78172277 Msa0524700:three_prime_UTR 30.0%
ACCAAAATGTAGAAATATGC+CGG + chr3_4:78172470-78172489 None:intergenic 30.0%
! TCTGAAATCAATTGTCTGTT+TGG + chr3_4:78172641-78172660 None:intergenic 30.0%
TTAGTATCTGTTGTCTAAGT+GGG + chr3_4:78172777-78172796 None:intergenic 30.0%
TTTAGTATCTGTTGTCTAAG+TGG + chr3_4:78172778-78172797 None:intergenic 30.0%
AATTTCTGAACTATGGAGAT+CGG - chr3_4:78172843-78172862 Msa0524710:intron 30.0%
! TTTTTGTTCAAACTAGATCC+TGG - chr3_4:78173230-78173249 Msa0524710:intron 30.0%
GTGAAACCATTTAATGAAGA+TGG - chr3_4:78173365-78173384 Msa0524710:intron 30.0%
AATTATCACCAACTTTACTC+AGG - chr3_4:78173394-78173413 Msa0524710:intron 30.0%
CAAATGTGTATTTGTGTTTG+TGG + chr3_4:78173454-78173473 None:intergenic 30.0%
GAAATTTCAGGAAAAATGTG+GGG + chr3_4:78173533-78173552 None:intergenic 30.0%
!!! TCATATTTTTGAGGTCTTTG+TGG + chr3_4:78173602-78173621 None:intergenic 30.0%
!! GGAATTTGGTCATATTTTTG+AGG + chr3_4:78173611-78173630 None:intergenic 30.0%
AAGTTTGTATGAAGGGAATT+TGG + chr3_4:78173625-78173644 None:intergenic 30.0%
TATAGAAAGATATGGACTTG+TGG + chr3_4:78173653-78173672 None:intergenic 30.0%
CTCAGAAATTCTGTTACATA+CGG + chr3_4:78173745-78173764 None:intergenic 30.0%
AACAGAATTTCTGAGTGATT+TGG - chr3_4:78173750-78173769 Msa0524710:intron 30.0%
!!! TTTTTTGCCAAGAAGAGTAT+TGG + chr3_4:78173812-78173831 None:intergenic 30.0%
!! GGAGCACAAAAATTTTAGTA+AGG - chr3_4:78173862-78173881 Msa0524710:intron 30.0%
TATGCGATGTTTAATATCCA+TGG + chr3_4:78173932-78173951 None:intergenic 30.0%
! TTTGTCTAAGGTTTAGCTAT+GGG + chr3_4:78173955-78173974 None:intergenic 30.0%
ACAATTAGTACTTTAGTGTG+TGG - chr3_4:78173982-78174001 Msa0524710:intron 30.0%
CAATTAGTACTTTAGTGTGT+GGG - chr3_4:78173983-78174002 Msa0524710:intron 30.0%
! CAGGAATAACTTTTTACTTC+TGG + chr3_4:78174022-78174041 None:intergenic 30.0%
! AAAACATGGTTTAAAGCTGA+TGG + chr3_4:78174068-78174087 None:intergenic 30.0%
!!! TTAAACCATGTTTTGAGGAA+AGG - chr3_4:78174074-78174093 Msa0524710:CDS 30.0%
!!! TAAACCATGTTTTGAGGAAA+GGG - chr3_4:78174075-78174094 Msa0524710:CDS 30.0%
! TTCTTTTATCCTTCACTTCT+TGG + chr3_4:78174103-78174122 None:intergenic 30.0%
TAACAATGTGTGTGTATACA+TGG - chr3_4:78174332-78174351 Msa0524710:intron 30.0%
!!! GCGTAACATTTTTTTCTTTC+TGG + chr3_4:78174431-78174450 None:intergenic 30.0%
! AAATTAAAGACGTTTTACGG+TGG - chr3_4:78174461-78174480 Msa0524710:CDS 30.0%
!!! GCCATAAAGTCTTTATTTTC+TGG + chr3_4:78174498-78174517 None:intergenic 30.0%
AAATAAAGACTTTATGGCAC+AGG - chr3_4:78174500-78174519 Msa0524710:intron 30.0%
TTTGTACAGATGTAAATGTG+TGG + chr3_4:78174550-78174569 None:intergenic 30.0%
! CTTCATATGGATTTTCTTCA+TGG + chr3_4:78174655-78174674 None:intergenic 30.0%
GAAGAAAATCCATATGAAGA+AGG - chr3_4:78174656-78174675 Msa0524710:CDS 30.0%
TTAAGGTTACCTTCTTCATA+TGG + chr3_4:78174668-78174687 None:intergenic 30.0%
GATGATAACACTAAATGAGT+GGG - chr3_4:78174714-78174733 Msa0524710:CDS 30.0%
TCATGCTCATAAATCTTTCT+GGG + chr3_4:78174806-78174825 None:intergenic 30.0%
ATCATGCTCATAAATCTTTC+TGG + chr3_4:78174807-78174826 None:intergenic 30.0%
GATTTATGAGCATGATTATG+AGG - chr3_4:78174811-78174830 Msa0524710:intron 30.0%
! AATTTGAGATTGCCATTCAA+AGG - chr3_4:78174863-78174882 Msa0524710:intron 30.0%
GGATATAATCAAATGGTACT+AGG + chr3_4:78175040-78175059 None:intergenic 30.0%
TTGGTAGGGATATAATCAAA+TGG + chr3_4:78175047-78175066 None:intergenic 30.0%
TTAACACTAACACTTACACT+TGG + chr3_4:78175066-78175085 None:intergenic 30.0%
AGTAATATATTGCTATGGCA+AGG - chr3_4:78175275-78175294 Msa0524710:intron 30.0%
ATGCACAAAAAAATTAACGC+AGG - chr3_4:78175456-78175475 Msa0524710:intron 30.0%
! CATTTTCAATGTTTTCGTTG+GGG + chr3_4:78175548-78175567 None:intergenic 30.0%
! CCATTTTCAATGTTTTCGTT+GGG + chr3_4:78175549-78175568 None:intergenic 30.0%
! TCCATTTTCAATGTTTTCGT+TGG + chr3_4:78175550-78175569 None:intergenic 30.0%
! GAAACTACTCAGAATCTTTT+GGG + chr3_4:78175671-78175690 None:intergenic 30.0%
! TGAAACTACTCAGAATCTTT+TGG + chr3_4:78175672-78175691 None:intergenic 30.0%
AAAGATTCTGAGTAGTTTCA+CGG - chr3_4:78175672-78175691 Msa0524710:CDS 30.0%
ATCCAAAGATAGAAATAGAG+GGG - chr3_4:78175726-78175745 Msa0524710:CDS 30.0%
AAGAGGAAGCAAAATTCTTA+TGG - chr3_4:78175908-78175927 Msa0524710:CDS 30.0%
TACCTATATCTGCGATCATA+GGG + chr3_4:78168988-78169007 Msa0524700:intron 35.0%
CTTTCAGAGAGATGTCAATT+GGG - chr3_4:78169159-78169178 Msa0524710:intron 35.0%
AACAAGATCAGCAATCAACA+TGG + chr3_4:78169186-78169205 Msa0524700:intron 35.0%
CATAATCCTGACATTCTTTG+TGG - chr3_4:78169229-78169248 Msa0524710:intron 35.0%
TCTTCTTATGGTCATCAACA+AGG + chr3_4:78169280-78169299 Msa0524700:intron 35.0%
ACCATAAGAAGATTGCTATC+AGG - chr3_4:78169288-78169307 Msa0524710:CDS 35.0%
ACCTGATAGCAATCTTCTTA+TGG + chr3_4:78169292-78169311 Msa0524700:intron 35.0%
CCATACTTTCTACATCAACA+CGG - chr3_4:78169321-78169340 Msa0524710:CDS 35.0%
TTAGTCTCAACGATTCCAAA+GGG + chr3_4:78169437-78169456 Msa0524700:intron 35.0%
! ATTAGTCTCAACGATTCCAA+AGG + chr3_4:78169438-78169457 Msa0524700:intron 35.0%
! GTTGAGACTAATCATTGACT+CGG - chr3_4:78169446-78169465 Msa0524710:intron 35.0%
GGTATAGATAACAACTACCA+AGG + chr3_4:78169586-78169605 Msa0524700:intron 35.0%
GATGAATCCCCTTTGTATAT+TGG + chr3_4:78169607-78169626 Msa0524700:intron 35.0%
! AAGGGGATTCATCAAACTTT+TGG - chr3_4:78169614-78169633 Msa0524710:intron 35.0%
! AGGGGATTCATCAAACTTTT+GGG - chr3_4:78169615-78169634 Msa0524710:intron 35.0%
!! GATTCATCAAACTTTTGGGT+TGG - chr3_4:78169619-78169638 Msa0524710:intron 35.0%
!! TTTGGTGTCAAGATAAAAGG+GGG + chr3_4:78169920-78169939 Msa0524700:intron 35.0%
CAAACATTTATTCTTCCCCA+TGG - chr3_4:78170105-78170124 Msa0524710:intron 35.0%
! AGTTGGTATATCTGCTGAAA+TGG + chr3_4:78170148-78170167 Msa0524700:intron 35.0%
CAGATATACCAACTTATAGC+AGG - chr3_4:78170154-78170173 Msa0524710:intron 35.0%
! AGGTAGAGGATTTTAAGCAT+AGG - chr3_4:78170664-78170683 Msa0524710:intron 35.0%
!! GATTTTAAGCATAGGAGTGT+CGG - chr3_4:78170672-78170691 Msa0524710:intron 35.0%
TTCCGATAATATATGCAGTG+AGG + chr3_4:78170824-78170843 Msa0524700:intron 35.0%
TATCGGAAACATGACAAATC+TGG - chr3_4:78170836-78170855 Msa0524710:intron 35.0%
AGAATGCAATGCTAAGTCAA+GGG + chr3_4:78170928-78170947 Msa0524700:intron 35.0%
TAGAATGCAATGCTAAGTCA+AGG + chr3_4:78170929-78170948 Msa0524700:intron 35.0%
! TTCTTCCTTTAACTTCCACT+AGG + chr3_4:78170983-78171002 Msa0524700:intron 35.0%
! CTACTTTAATCTGGTTGGTA+AGG - chr3_4:78171133-78171152 Msa0524710:CDS 35.0%
TAAGGGAACGAATTAACATC+CGG - chr3_4:78171151-78171170 Msa0524710:CDS 35.0%
ATATAGTATTTACCACCTCC+AGG - chr3_4:78171292-78171311 Msa0524710:intron 35.0%
TGCTATTAAGTTTGTCAAGC+AGG - chr3_4:78171341-78171360 Msa0524710:intron 35.0%
GCTATTAAGTTTGTCAAGCA+GGG - chr3_4:78171342-78171361 Msa0524710:intron 35.0%
CTGAAAGTTGACTAGGATAT+AGG + chr3_4:78171461-78171480 Msa0524700:intron 35.0%
AGTTAAGCTGAAAGTTGACT+AGG + chr3_4:78171468-78171487 Msa0524700:intron 35.0%
TTGAAGAGAGAATTCTGTTG+GGG + chr3_4:78171718-78171737 Msa0524700:intron 35.0%
GTTTGAAGAGAGAATTCTGT+TGG + chr3_4:78171720-78171739 Msa0524700:intron 35.0%
! GGATGATTTTATATCCCAGA+TGG - chr3_4:78172297-78172316 Msa0524710:intron 35.0%
AAGATGATGTCAACCTTTGA+CGG + chr3_4:78172434-78172453 None:intergenic 35.0%
TACAGTTCATACTCTAGTAC+TGG - chr3_4:78172528-78172547 Msa0524710:intron 35.0%
TTTAAAGAATGGGTCTGAAC+AGG - chr3_4:78172604-78172623 Msa0524710:CDS 35.0%
AAACATATTGCATCAACCTG+AGG - chr3_4:78172895-78172914 Msa0524710:intron 35.0%
GTCTGATTAAGATGTTCTCT+AGG + chr3_4:78173041-78173060 None:intergenic 35.0%
AGACAAGTAAATGGAACAGA+AGG - chr3_4:78173057-78173076 Msa0524710:intron 35.0%
! ACTAGGAACAAGACATTTTG+AGG - chr3_4:78173101-78173120 Msa0524710:intron 35.0%
! CTAGGAACAAGACATTTTGA+GGG - chr3_4:78173102-78173121 Msa0524710:intron 35.0%
TATTTGTGCCTCTTAGCTAA+TGG - chr3_4:78173164-78173183 Msa0524710:intron 35.0%
TATGAGCTTAGCAATGCAAT+GGG + chr3_4:78173197-78173216 None:intergenic 35.0%
TTATGAGCTTAGCAATGCAA+TGG + chr3_4:78173198-78173217 None:intergenic 35.0%
TTCTCACTGTATAAGGTTGT+GGG + chr3_4:78173292-78173311 None:intergenic 35.0%
CTTCTACTTCTCACTGTATA+AGG + chr3_4:78173299-78173318 None:intergenic 35.0%
!! ATGATCGATTCGTATAAGCT+GGG + chr3_4:78173327-78173346 None:intergenic 35.0%
ACCATTTAATGAAGATGGGA+AGG - chr3_4:78173370-78173389 Msa0524710:intron 35.0%
GGACATGAAGTTTGTATGAA+GGG + chr3_4:78173632-78173651 None:intergenic 35.0%
TGGACATGAAGTTTGTATGA+AGG + chr3_4:78173633-78173652 None:intergenic 35.0%
TCAATCACCAATACTCTTCT+TGG - chr3_4:78173802-78173821 Msa0524710:intron 35.0%
! GTTTGTCTAAGGTTTAGCTA+TGG + chr3_4:78173956-78173975 None:intergenic 35.0%
!!! CCAAGATCTTTTGGAATTTC+AGG + chr3_4:78174041-78174060 None:intergenic 35.0%
CCTGAAATTCCAAAAGATCT+TGG - chr3_4:78174038-78174057 Msa0524710:CDS 35.0%
! GATGGATAACCAAGATCTTT+TGG + chr3_4:78174050-78174069 None:intergenic 35.0%
!!! CAGCTTTAAACCATGTTTTG+AGG - chr3_4:78174069-78174088 Msa0524710:CDS 35.0%
!!! AAACCATGTTTTGAGGAAAG+GGG - chr3_4:78174076-78174095 Msa0524710:CDS 35.0%
ATTCTTTCGTTCAAAGGAAG+TGG + chr3_4:78174224-78174243 None:intergenic 35.0%
TTCACGATTCTTTCGTTCAA+AGG + chr3_4:78174230-78174249 None:intergenic 35.0%
ATGTAAACCATTGCGAGAAT+TGG + chr3_4:78174309-78174328 None:intergenic 35.0%
GGATGATAACACTAAATGAG+TGG - chr3_4:78174713-78174732 Msa0524710:CDS 35.0%
AAGAACCAGTTGACATTCAA+GGG - chr3_4:78174763-78174782 Msa0524710:CDS 35.0%
ACATGATTACACGATCAGAT+TGG + chr3_4:78174981-78175000 None:intergenic 35.0%
ACTAACACTTACACTTGGTA+GGG + chr3_4:78175061-78175080 None:intergenic 35.0%
AAGATATGTCATATGTCACG+TGG - chr3_4:78175085-78175104 Msa0524710:intron 35.0%
AGATATGTCATATGTCACGT+GGG - chr3_4:78175086-78175105 Msa0524710:intron 35.0%
!!! GCTGCTTTTTTGAATAAACC+AGG + chr3_4:78175158-78175177 None:intergenic 35.0%
AACTAAGATTGCAATCAAGC+TGG + chr3_4:78175231-78175250 None:intergenic 35.0%
! TTACTGTCATCTAGAGTTTG+AGG + chr3_4:78175260-78175279 None:intergenic 35.0%
! CATATCAAGTTGTGACACTA+CGG + chr3_4:78175337-78175356 None:intergenic 35.0%
AGGGAAATATTAGGTAAGCA+GGG + chr3_4:78175419-78175438 None:intergenic 35.0%
TAGGTAAGCAGGGAAATATT+AGG + chr3_4:78175428-78175447 None:intergenic 35.0%
CCCAACGAAAACATTGAAAA+TGG - chr3_4:78175546-78175565 Msa0524710:intron 35.0%
AAAAGATCTTCGACTGAATC+TGG + chr3_4:78175597-78175616 None:intergenic 35.0%
TCCAAAGATAGAAATAGAGG+GGG - chr3_4:78175727-78175746 Msa0524710:CDS 35.0%
GAGAACAAGTTTGGAAAAAG+AGG - chr3_4:78175891-78175910 Msa0524710:intron 35.0%
AGCAAAATTCTTATGGCTGA+TGG - chr3_4:78175915-78175934 Msa0524710:CDS 35.0%
GAACGTCTTCTAACTAGAGA+TGG + chr3_4:78168859-78168878 Msa0524700:intron 40.0%
CTAGTTAGAAGACGTTCAAG+TGG - chr3_4:78168862-78168881 Msa0524710:three_prime_UTR 40.0%
AAGTGGCGAAATAAGGAACT+TGG - chr3_4:78168879-78168898 Msa0524710:three_prime_UTR 40.0%
! AGCAGTCTTTTACCAGCATT+TGG - chr3_4:78168913-78168932 Msa0524710:CDS 40.0%
TTTGGCACTAATCCTGATGA+AGG - chr3_4:78168931-78168950 Msa0524710:CDS 40.0%
GTACCTATATCTGCGATCAT+AGG + chr3_4:78168989-78169008 Msa0524700:intron 40.0%
! TCTCTGAAAGCTAACTCGAA+TGG + chr3_4:78169149-78169168 Msa0524700:intron 40.0%
GCTTTCAGAGAGATGTCAAT+TGG - chr3_4:78169158-78169177 Msa0524710:intron 40.0%
AGTAAGCCACAAAGAATGTC+AGG + chr3_4:78169238-78169257 Msa0524700:intron 40.0%
GACATTCTTTGTGGCTTACT+TGG - chr3_4:78169238-78169257 Msa0524710:intron 40.0%
! CCGTGTTGATGTAGAAAGTA+TGG + chr3_4:78169324-78169343 Msa0524700:intron 40.0%
AATGACAACCCACCGTAATT+AGG - chr3_4:78169363-78169382 Msa0524710:CDS 40.0%
ATGACAACCCACCGTAATTA+GGG - chr3_4:78169364-78169383 Msa0524710:CDS 40.0%
GGATCAAAAGGCCCTAATTA+CGG + chr3_4:78169378-78169397 Msa0524700:intron 40.0%
!! ACTAATCATTGACTCGGCAA+TGG - chr3_4:78169452-78169471 Msa0524710:intron 40.0%
!! CTAATCATTGACTCGGCAAT+GGG - chr3_4:78169453-78169472 Msa0524710:intron 40.0%
! CATAGTTGATGTGTTACCCT+TGG - chr3_4:78169524-78169543 Msa0524710:intron 40.0%
TATGACTACTCGCGTAAAGA+CGG + chr3_4:78169822-78169841 Msa0524700:intron 40.0%
AGCAATGGCTGAACAATTCA+AGG - chr3_4:78170003-78170022 Msa0524710:intron 40.0%
! GTGATTTGCCTGCTATAAGT+TGG + chr3_4:78170165-78170184 Msa0524700:intron 40.0%
TTCTGAACATGCTTAGACTC+TGG - chr3_4:78170209-78170228 Msa0524710:CDS 40.0%
AAACCTGCTAACTGTCTTAC+AGG - chr3_4:78170383-78170402 Msa0524710:intron 40.0%
CTATTTGCAGTGCATTTCAC+AGG - chr3_4:78170579-78170598 Msa0524710:intron 40.0%
GTTACACTTACTCCATGTAC+TGG - chr3_4:78170700-78170719 Msa0524710:intron 40.0%
GGTTACAATAGACCAGTACA+TGG + chr3_4:78170715-78170734 Msa0524700:intron 40.0%
ATTGTAACCCTTACCACTGT+TGG - chr3_4:78170726-78170745 Msa0524710:intron 40.0%
TAAATCTCCATAGCCAACAG+TGG + chr3_4:78170742-78170761 Msa0524700:intron 40.0%
TGCAGAAAATACAACGGAGA+AGG - chr3_4:78170764-78170783 Msa0524710:intron 40.0%
GGCCTCACTGCATATATTAT+CGG - chr3_4:78170819-78170838 Msa0524710:intron 40.0%
GTCTTCCTAGTGGAAGTTAA+AGG - chr3_4:78170975-78170994 Msa0524710:intron 40.0%
TACTTACAGTGGGAGAATGT+CGG + chr3_4:78171064-78171083 Msa0524700:intron 40.0%
GGGAAAGAAGATGTAGATCT+AGG - chr3_4:78171266-78171285 Msa0524710:intron 40.0%
TAAAGTTAGGAAATGGAGCC+TGG + chr3_4:78171313-78171332 Msa0524700:intron 40.0%
! TAAGGTCTAAGAAGCATGTC+TGG + chr3_4:78171400-78171419 Msa0524700:intron 40.0%
AGGGATATTTGCTCAAACCT+TGG + chr3_4:78171441-78171460 Msa0524700:intron 40.0%
TTTGGTCCTTCAAACCTTCT+GGG + chr3_4:78172129-78172148 Msa0524700:three_prime_UTR 40.0%
ATTTGGTCCTTCAAACCTTC+TGG + chr3_4:78172130-78172149 Msa0524700:three_prime_UTR 40.0%
AGGTTTGAAGGACCAAATGT+TGG - chr3_4:78172132-78172151 Msa0524710:intron 40.0%
!! ATACCGGCTCTAATTGCTTT+AGG + chr3_4:78172220-78172239 Msa0524700:three_prime_UTR 40.0%
GAAAAGATGCTGAGCAATAC+CGG + chr3_4:78172236-78172255 Msa0524700:three_prime_UTR 40.0%
ATCTGATACCTGTGTAGTGA+TGG + chr3_4:78172393-78172412 None:intergenic 40.0%
AGATGATGTCAACCTTTGAC+GGG + chr3_4:78172433-78172452 None:intergenic 40.0%
CATCTTGCAAAATGAGATGC+CGG - chr3_4:78172448-78172467 Msa0524710:CDS 40.0%
!! GCCGGCATATTTCTACATTT+TGG - chr3_4:78172466-78172485 Msa0524710:CDS 40.0%
!! CATTTTGGTATCTGGATCAG+TGG - chr3_4:78172481-78172500 Msa0524710:intron 40.0%
ACTGAACCATTTCTAATCGC+AGG - chr3_4:78172571-78172590 Msa0524710:intron 40.0%
ACACATCCTGCGATTAGAAA+TGG + chr3_4:78172580-78172599 None:intergenic 40.0%
TTTGATGTGTTTGCTTCAGC+AGG + chr3_4:78172994-78173013 None:intergenic 40.0%
GCTAGGTAGTAAGAGATACT+AGG - chr3_4:78173084-78173103 Msa0524710:intron 40.0%
GAGAATTGCCATTAGCTAAG+AGG + chr3_4:78173175-78173194 None:intergenic 40.0%
CTTCTCACTGTATAAGGTTG+TGG + chr3_4:78173293-78173312 None:intergenic 40.0%
!! GATGATCGATTCGTATAAGC+TGG + chr3_4:78173328-78173347 None:intergenic 40.0%
TCATCATCATTTCAAGCAGC+TGG - chr3_4:78173343-78173362 Msa0524710:intron 40.0%
GCCTTCCCATCTTCATTAAA+TGG + chr3_4:78173374-78173393 None:intergenic 40.0%
CAGGAAAAATGTGGGGATTT+GGG + chr3_4:78173526-78173545 None:intergenic 40.0%
TCAGGAAAAATGTGGGGATT+TGG + chr3_4:78173527-78173546 None:intergenic 40.0%
! TTGTGGCTTGCAAGGATATT+TGG + chr3_4:78173585-78173604 None:intergenic 40.0%
CAGTTTATGAAGGGCCTAAA+AGG - chr3_4:78173700-78173719 Msa0524710:intron 40.0%
TTTATGAAGGGCCTAAAAGG+CGG - chr3_4:78173703-78173722 Msa0524710:intron 40.0%
AGTGTGTGGGAGAAAGATAA+CGG - chr3_4:78173996-78174015 Msa0524710:intron 40.0%
AATGTCCTGTTTGGGAGAAA+GGG + chr3_4:78174175-78174194 None:intergenic 40.0%
GTGACATGAATGTCCTGTTT+GGG + chr3_4:78174183-78174202 None:intergenic 40.0%
TCATGTCACCTAATGATGCA+TGG - chr3_4:78174194-78174213 Msa0524710:CDS 40.0%
GTGGTTATCCATGCATCATT+AGG + chr3_4:78174205-78174224 None:intergenic 40.0%
! TTTGTGCCCTCATTTTGTGT+CGG + chr3_4:78174614-78174633 None:intergenic 40.0%
AGAAGGTAACCTTAATCCTG+TGG - chr3_4:78174673-78174692 Msa0524710:CDS 40.0%
! CCTTAATCCTGTGGATTGTA+CGG - chr3_4:78174682-78174701 Msa0524710:CDS 40.0%
TGAGTGGGTAGATATTGTGT+AGG - chr3_4:78174729-78174748 Msa0524710:CDS 40.0%
CAAGAACCAGTTGACATTCA+AGG - chr3_4:78174762-78174781 Msa0524710:CDS 40.0%
TTCAAGGGTTCTGCTAAACA+CGG - chr3_4:78174778-78174797 Msa0524710:CDS 40.0%
ACACAAAGTCTGCCTTTGAA+TGG + chr3_4:78174878-78174897 None:intergenic 40.0%
CACTAACACTTACACTTGGT+AGG + chr3_4:78175062-78175081 None:intergenic 40.0%
GATATGTCATATGTCACGTG+GGG - chr3_4:78175087-78175106 Msa0524710:intron 40.0%
AAGATTGCCCCATGATAAAG+AGG - chr3_4:78175120-78175139 Msa0524710:intron 40.0%
TGTTGTGCCTCTTTATCATG+GGG + chr3_4:78175130-78175149 None:intergenic 40.0%
GTGTTGTGCCTCTTTATCAT+GGG + chr3_4:78175131-78175150 None:intergenic 40.0%
AGTGTTGTGCCTCTTTATCA+TGG + chr3_4:78175132-78175151 None:intergenic 40.0%
! TTTTAAGCATGAGCACAGCA+AGG + chr3_4:78175184-78175203 None:intergenic 40.0%
CGTAGTGTCACAACTTGATA+TGG - chr3_4:78175335-78175354 Msa0524710:intron 40.0%
CAGGGAAATATTAGGTAAGC+AGG + chr3_4:78175420-78175439 None:intergenic 40.0%
!! TTTTGACTCTAATCGGGACT+AGG + chr3_4:78175512-78175531 None:intergenic 40.0%
!!! CGTGGATTTTGACTCTAATC+GGG + chr3_4:78175518-78175537 None:intergenic 40.0%
!!! CCGTGGATTTTGACTCTAAT+CGG + chr3_4:78175519-78175538 None:intergenic 40.0%
CCGATTAGAGTCAAAATCCA+CGG - chr3_4:78175516-78175535 Msa0524710:intron 40.0%
TCTGGTAGGATAATGAGCTT+TGG + chr3_4:78175579-78175598 None:intergenic 40.0%
! GAAGATCTTTTCAGAGTAGC+AGG - chr3_4:78175606-78175625 Msa0524710:CDS 40.0%
! TCTTTTCAGAGTAGCAGGTA+TGG - chr3_4:78175611-78175630 Msa0524710:CDS 40.0%
! CTTTTCAGAGTAGCAGGTAT+GGG - chr3_4:78175612-78175631 Msa0524710:CDS 40.0%
CCAAAGATAGAAATAGAGGG+GGG - chr3_4:78175728-78175747 Msa0524710:CDS 40.0%
CAAAGATAGAAATAGAGGGG+GGG - chr3_4:78175729-78175748 Msa0524710:CDS 40.0%
AAAGATAGAAATAGAGGGGG+GGG - chr3_4:78175730-78175749 Msa0524710:CDS 40.0%
!! TTATTATGAAGCACTGTGGG+TGG + chr3_4:78175793-78175812 None:intergenic 40.0%
CTGTATGCAGAGAACAAGTT+TGG - chr3_4:78175882-78175901 Msa0524710:intron 40.0%
TAACTCATCGTCCTCTCTTA+GGG + chr3_4:78175964-78175983 None:intergenic 40.0%
ATAACTCATCGTCCTCTCTT+AGG + chr3_4:78175965-78175984 None:intergenic 40.0%
GACGTTCAAGTGGCGAAATA+AGG - chr3_4:78168872-78168891 Msa0524710:three_prime_UTR 45.0%
! TCAGGATTAGTGCCAAATGC+TGG + chr3_4:78168928-78168947 Msa0524700:intron 45.0%
AGGTCGAAGTAACCTTCATC+AGG + chr3_4:78168946-78168965 Msa0524700:intron 45.0%
CTCCCTATGATCGCAGATAT+AGG - chr3_4:78168983-78169002 Msa0524710:CDS 45.0%
TGTCATTACACAGACAGCAC+AGG + chr3_4:78169060-78169079 Msa0524700:intron 45.0%
ATTGTGGCAAACGTTCCTAG+TGG - chr3_4:78169094-78169113 Msa0524710:intron 45.0%
GCAAACGTTCCTAGTGGTAT+TGG - chr3_4:78169100-78169119 Msa0524710:intron 45.0%
! AACGTTCCTAGTGGTATTGG+TGG - chr3_4:78169103-78169122 Msa0524710:intron 45.0%
AGTACACCACCAATACCACT+AGG + chr3_4:78169112-78169131 Msa0524700:intron 45.0%
!! TATTGGTGGTGTACTCAGCA+TGG - chr3_4:78169117-78169136 Msa0524710:intron 45.0%
!! ATTGGTGGTGTACTCAGCAT+GGG - chr3_4:78169118-78169137 Msa0524710:intron 45.0%
CAAAAGGCCCTAATTACGGT+GGG + chr3_4:78169374-78169393 Msa0524700:intron 45.0%
TCAAAAGGCCCTAATTACGG+TGG + chr3_4:78169375-78169394 Msa0524700:intron 45.0%
ATACCTTGTGGCACCTAGTT+GGG + chr3_4:78169399-78169418 Msa0524700:intron 45.0%
AATACCTTGTGGCACCTAGT+TGG + chr3_4:78169400-78169419 Msa0524700:intron 45.0%
AAGCCATGGTCAATACCTTG+TGG + chr3_4:78169411-78169430 Msa0524700:intron 45.0%
ATTCCAAAGGGTCTAAGCCA+TGG + chr3_4:78169425-78169444 Msa0524700:intron 45.0%
AAAGGGGGCAGACAACAAAA+CGG + chr3_4:78169905-78169924 Msa0524700:intron 45.0%
AGAGTGGAAGCTAGATCCAT+GGG + chr3_4:78170124-78170143 Msa0524700:intron 45.0%
TATCTGCTGAAATGGCAGAG+TGG + chr3_4:78170140-78170159 Msa0524700:intron 45.0%
GTGTTAGTGAGCTCTTCTCA+AGG - chr3_4:78170242-78170261 Msa0524710:CDS 45.0%
ATGGCAGAACATGTGCGAAA+TGG + chr3_4:78170348-78170367 Msa0524700:intron 45.0%
TAGCCTGTAAGACAGTTAGC+AGG + chr3_4:78170389-78170408 Msa0524700:intron 45.0%
ACAGGCTAGAGAAAGACATC+AGG - chr3_4:78170401-78170420 Msa0524710:intron 45.0%
CAGGCTAGAGAAAGACATCA+GGG - chr3_4:78170402-78170421 Msa0524710:intron 45.0%
! TCACAGGCTGCGTGTATTTT+TGG - chr3_4:78170595-78170614 Msa0524710:intron 45.0%
!!! AGGCTGCGTGTATTTTTGGT+TGG - chr3_4:78170599-78170618 Msa0524710:intron 45.0%
GCTTTCCATCACAAATCACC+CGG - chr3_4:78170621-78170640 Msa0524710:intron 45.0%
! TGTTTCCGGGTGATTTGTGA+TGG + chr3_4:78170629-78170648 Msa0524700:intron 45.0%
!! TAAGCATAGGAGTGTCGGAT+CGG - chr3_4:78170677-78170696 Msa0524710:intron 45.0%
TCCATAGCCAACAGTGGTAA+GGG + chr3_4:78170736-78170755 Msa0524700:intron 45.0%
CGGAAACATGACAAATCTGG+TGG - chr3_4:78170839-78170858 Msa0524710:intron 45.0%
! AGCAAAAATGGACTCCCAGA+AGG - chr3_4:78172112-78172131 Msa0524710:intron 45.0%
GCTGTGTATGTGCCAACATT+TGG + chr3_4:78172147-78172166 Msa0524700:three_prime_UTR 45.0%
!! ACAGCAAGAAGAAGTGCTAC+AGG - chr3_4:78172189-78172208 Msa0524710:intron 45.0%
CTGCCTAAAGCAATTAGAGC+CGG - chr3_4:78172214-78172233 Msa0524710:intron 45.0%
CATGACATCCATCACTACAC+AGG - chr3_4:78172382-78172401 Msa0524710:intron 45.0%
AGCAGAATACTACCCGTCAA+AGG - chr3_4:78172418-78172437 Msa0524710:CDS 45.0%
ATGGGTCTGAACAGGTATGA+TGG - chr3_4:78172612-78172631 Msa0524710:CDS 45.0%
AACCTGAGGCAGAAGTCATT+TGG - chr3_4:78172909-78172928 Msa0524710:intron 45.0%
ACCTGAGGCAGAAGTCATTT+GGG - chr3_4:78172910-78172929 Msa0524710:intron 45.0%
CAAACTAGATCCTGGAAGCA+TGG - chr3_4:78173238-78173257 Msa0524710:intron 45.0%
ATTTCTCCTACCATGCTTCC+AGG + chr3_4:78173251-78173270 None:intergenic 45.0%
! GGAAGCATGGTAGGAGAAAT+AGG - chr3_4:78173251-78173270 Msa0524710:intron 45.0%
ACCAACTTTACTCAGGTTCG+TGG - chr3_4:78173401-78173420 Msa0524710:intron 45.0%
ACCACGAACCTGAGTAAAGT+TGG + chr3_4:78173405-78173424 None:intergenic 45.0%
TTATGAAGGGCCTAAAAGGC+GGG - chr3_4:78173704-78173723 Msa0524710:intron 45.0%
! TCTGAGTGATTTGGAAGACG+AGG - chr3_4:78173759-78173778 Msa0524710:intron 45.0%
ATGTCCTGTTTGGGAGAAAG+GGG + chr3_4:78174174-78174193 None:intergenic 45.0%
GAATGTCCTGTTTGGGAGAA+AGG + chr3_4:78174176-78174195 None:intergenic 45.0%
GGTGACATGAATGTCCTGTT+TGG + chr3_4:78174184-78174203 None:intergenic 45.0%
TCATGGACCAATTCTCGCAA+TGG - chr3_4:78174299-78174318 Msa0524710:CDS 45.0%
CAGCATCCGACACAAAATGA+GGG - chr3_4:78174605-78174624 Msa0524710:intron 45.0%
CCGTACAATCCACAGGATTA+AGG + chr3_4:78174685-78174704 None:intergenic 45.0%
TTACTGACCGTACAATCCAC+AGG + chr3_4:78174692-78174711 None:intergenic 45.0%
! TGTGGATTGTACGGTCAGTA+AGG - chr3_4:78174691-78174710 Msa0524710:CDS 45.0%
! GTGGATTGTACGGTCAGTAA+GGG - chr3_4:78174692-78174711 Msa0524710:CDS 45.0%
CAGAACCCTTGAATGTCAAC+TGG + chr3_4:78174771-78174790 None:intergenic 45.0%
! AAGAGGCACAACACTAATCC+TGG - chr3_4:78175137-78175156 Msa0524710:intron 45.0%
GATCTTCGACTGAATCTGGT+AGG + chr3_4:78175593-78175612 None:intergenic 45.0%
!! CCCCCCTCTATTTCTATCTT+TGG + chr3_4:78175731-78175750 None:intergenic 45.0%
AAGATAGAAATAGAGGGGGG+GGG - chr3_4:78175731-78175750 Msa0524710:CDS 45.0%
!! ATTTATTAAAATTTAATTGT+AGG + chr3_4:78171753-78171772 Msa0524700:intron 5.0%
! AGGGCCTTTTGATCCCAACT+AGG - chr3_4:78169383-78169402 Msa0524710:CDS 50.0%
GGCACCTAGTTGGGATCAAA+AGG + chr3_4:78169390-78169409 Msa0524700:intron 50.0%
!! GTGCCACAAGGTATTGACCA+TGG - chr3_4:78169405-78169424 Msa0524710:intron 50.0%
TGACCATGGCTTAGACCCTT+TGG - chr3_4:78169419-78169438 Msa0524710:intron 50.0%
GAGTGGAAGCTAGATCCATG+GGG + chr3_4:78170123-78170142 Msa0524700:intron 50.0%
CAGAGTGGAAGCTAGATCCA+TGG + chr3_4:78170125-78170144 Msa0524700:intron 50.0%
CAGGCAAATCACACGACAGA+GGG - chr3_4:78170173-78170192 Msa0524710:intron 50.0%
AGGCAAATCACACGACAGAG+GGG - chr3_4:78170174-78170193 Msa0524710:intron 50.0%
TGCTTAGACTCTGGCGATTG+AGG - chr3_4:78170218-78170237 Msa0524710:CDS 50.0%
ACAAATCACCCGGAAACACG+TGG - chr3_4:78170631-78170650 Msa0524710:intron 50.0%
TTCCCAATCCACGTGTTTCC+GGG + chr3_4:78170642-78170661 Msa0524700:intron 50.0%
CTTCCCAATCCACGTGTTTC+CGG + chr3_4:78170643-78170662 Msa0524700:intron 50.0%
!! AAACACGTGGATTGGGAAGC+AGG - chr3_4:78170644-78170663 Msa0524710:intron 50.0%
!! AAGCATAGGAGTGTCGGATC+GGG - chr3_4:78170678-78170697 Msa0524710:intron 50.0%
! ACCCTTACCACTGTTGGCTA+TGG - chr3_4:78170732-78170751 Msa0524710:intron 50.0%
CTCCATAGCCAACAGTGGTA+AGG + chr3_4:78170737-78170756 Msa0524700:intron 50.0%
CTCTGTCAGAACCTTTGCCA+TGG - chr3_4:78170869-78170888 Msa0524710:intron 50.0%
AGTTAGGAAATGGAGCCTGG+AGG + chr3_4:78171310-78171329 Msa0524700:intron 50.0%
TGGACTCCCAGAAGGTTTGA+AGG - chr3_4:78172120-78172139 Msa0524710:intron 50.0%
! CGGCTCTAATTGCTTTAGGC+AGG + chr3_4:78172216-78172235 Msa0524700:three_prime_UTR 50.0%
TCCCAAATGACTTCTGCCTC+AGG + chr3_4:78172914-78172933 None:intergenic 50.0%
GAGGCAGAAGTCATTTGGGA+AGG - chr3_4:78172914-78172933 Msa0524710:intron 50.0%
!! TGCTCGGAAGTGCTTGAAGA+TGG + chr3_4:78172970-78172989 None:intergenic 50.0%
GTTTGCTTCAGCAGGTTGCT+CGG + chr3_4:78172986-78173005 None:intergenic 50.0%
ATGGAACAGAAGGTCGAGCT+AGG - chr3_4:78173067-78173086 Msa0524710:intron 50.0%
! CTAGATCCTGGAAGCATGGT+AGG - chr3_4:78173242-78173261 Msa0524710:intron 50.0%
! TGAGGTCTTTGTGGCTTGCA+AGG + chr3_4:78173593-78173612 None:intergenic 50.0%
TATGAAGGGCCTAAAAGGCG+GGG - chr3_4:78173705-78173724 Msa0524710:intron 50.0%
GGTCCCCTTTCCTCAAAACA+TGG + chr3_4:78174082-78174101 None:intergenic 50.0%
GAAAGGGGACCAAGAAGTGA+AGG - chr3_4:78174091-78174110 Msa0524710:CDS 50.0%
TGTTTGGGAGAAAGGGGCAA+AGG + chr3_4:78174168-78174187 None:intergenic 50.0%
TTTGCCCCTTTCTCCCAAAC+AGG - chr3_4:78174167-78174186 Msa0524710:CDS 50.0%
GCAGCATCCGACACAAAATG+AGG - chr3_4:78174604-78174623 Msa0524710:intron 50.0%
TTGCTATGGCAAGGTAGCCT+AGG - chr3_4:78175284-78175303 Msa0524710:intron 50.0%
AGATCTATGCGCCCTAAGAG+AGG - chr3_4:78175950-78175969 Msa0524710:CDS 50.0%
! GATCCCAACTAGGTGCCACA+AGG - chr3_4:78169393-78169412 Msa0524710:CDS 55.0%
GCAGGCAAATCACACGACAG+AGG - chr3_4:78170172-78170191 Msa0524710:intron 55.0%
CACGACAGAGGGGAAGTCTT+TGG - chr3_4:78170184-78170203 Msa0524710:intron 55.0%
TCACCCGGAAACACGTGGAT+TGG - chr3_4:78170636-78170655 Msa0524710:intron 55.0%
CACCCGGAAACACGTGGATT+GGG - chr3_4:78170637-78170656 Msa0524710:intron 55.0%
!! GTGGATTGGGAAGCAGGTAG+AGG - chr3_4:78170650-78170669 Msa0524710:intron 55.0%
TAGGAAATGGAGCCTGGAGG+TGG + chr3_4:78171307-78171326 Msa0524700:intron 55.0%
TGGGAGAAAGGGGCAAAGGA+GGG + chr3_4:78174164-78174183 None:intergenic 55.0%
TTGGGAGAAAGGGGCAAAGG+AGG + chr3_4:78174165-78174184 None:intergenic 55.0%
GACTAGGCTTGACAGTGGAC+TGG + chr3_4:78175496-78175515 None:intergenic 55.0%
ATCGGGACTAGGCTTGACAG+TGG + chr3_4:78175501-78175520 None:intergenic 55.0%
TTTCGTTGGGGTGATGTCCG+TGG + chr3_4:78175536-78175555 None:intergenic 55.0%
TAGAAATAGAGGGGGGGGGA+AGG - chr3_4:78175735-78175754 Msa0524710:CDS 55.0%
! CTTCCAGCACCCCGCCTTTT+AGG + chr3_4:78173717-78173736 None:intergenic 60.0%
GGGCCTAAAAGGCGGGGTGC+TGG - chr3_4:78173711-78173730 Msa0524710:intron 70.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 78168847 78176053 78168847 ID=Msa0524710;Name=Msa0524710
chr3_4 mRNA 78168847 78176053 78168847 ID=Msa0524710-mRNA-1;Parent=Msa0524710;Name=Msa0524710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.91|0.84|1|1|1|13|58|634
chr3_4 exon 78168847 78169008 78168847 ID=Msa0524710-mRNA-1:exon:23120;Parent=Msa0524710-mRNA-1
chr3_4 exon 78169273 78169422 78169273 ID=Msa0524710-mRNA-1:exon:23119;Parent=Msa0524710-mRNA-1
chr3_4 exon 78170193 78170292 78170193 ID=Msa0524710-mRNA-1:exon:23118;Parent=Msa0524710-mRNA-1
chr3_4 exon 78171120 78171197 78171120 ID=Msa0524710-mRNA-1:exon:23117;Parent=Msa0524710-mRNA-1
chr3_4 exon 78171485 78171670 78171485 ID=Msa0524710-mRNA-1:exon:23116;Parent=Msa0524710-mRNA-1
chr3_4 exon 78172275 78172307 78172275 ID=Msa0524710-mRNA-1:exon:23115;Parent=Msa0524710-mRNA-1
chr3_4 exon 78172398 78172496 78172398 ID=Msa0524710-mRNA-1:exon:23114;Parent=Msa0524710-mRNA-1
chr3_4 exon 78172582 78172821 78172582 ID=Msa0524710-mRNA-1:exon:23113;Parent=Msa0524710-mRNA-1
chr3_4 exon 78174010 78174327 78174010 ID=Msa0524710-mRNA-1:exon:23112;Parent=Msa0524710-mRNA-1
chr3_4 exon 78174438 78174495 78174438 ID=Msa0524710-mRNA-1:exon:23111;Parent=Msa0524710-mRNA-1
chr3_4 exon 78174637 78174801 78174637 ID=Msa0524710-mRNA-1:exon:23110;Parent=Msa0524710-mRNA-1
chr3_4 exon 78175591 78175806 78175591 ID=Msa0524710-mRNA-1:exon:23109;Parent=Msa0524710-mRNA-1
chr3_4 exon 78175896 78176053 78175896 ID=Msa0524710-mRNA-1:exon:23108;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78175896 78176053 78175896 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78175591 78175806 78175591 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78174637 78174801 78174637 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78174438 78174495 78174438 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78174010 78174327 78174010 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78172582 78172821 78172582 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78172398 78172496 78172398 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78172275 78172307 78172275 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78171485 78171670 78171485 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78171120 78171197 78171120 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78170193 78170292 78170193 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78169273 78169422 78169273 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 CDS 78168905 78169008 78168905 ID=Msa0524710-mRNA-1:cds;Parent=Msa0524710-mRNA-1
chr3_4 three_prime_UTR 78168847 78168904 78168847 ID=Msa0524710-mRNA-1:three_prime_utr;Parent=Msa0524710-mRNA-1
Gene Sequence

>Msa0524710

ATGACGTTGCCATCTCTAGTTAGAAGACGTTCAAGTGGCGAAATAAGGAACTTGGCCTCAATTTCTAGCAGTCTTTTACCAGCATTTGGCACTAATCCTGATGAAGGTTACTTCGACCTAAAAAAATATGTTATTGCTCCCTATGATCGCAGATATAGATTGTGGCAAACGTTCCTAGTGGTATTGGTGGTGTACTCAGCATGGGCATCTCCATTCGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCCATGTTGATTGCTGATCTTGTTGTCGATGCCTTCTTTGCATTTGACATAATCCTGACATTCTTTGTGGCTTACTTGGATAAATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTATGTCAAACATTTATTCTTCCCCATGGATCTAGCTTCCACTCTGCCATTTCAGCAGATATACCAACTTATAGCAGGCAAATCACACGACAGAGGGGAAGTCTTTGGCTTTCTGAACATGCTTAGACTCTGGCGATTGAGGCGTGTTAGTGAGCTCTTCTCAAGGCTAGAGAAAGACATCAGGGTCAGCTACTCAGTAACAAGAGTCTGTAAACTGTTATGCGTTACGCTATTTGCAGTGCATTTCACAGGCTGCGTGTATTTTTGGTTGGCTTTCCATCACAAATCACCCGGAAACACGTGGATTGGGAAGCAGGTAGAGGATTTTAAGCATAGGAGTGTCGGATCGGGTTACACTTACTCCATGTACTGGTCTATTGTAACCCTTACCACTGTTGGCTATGGAGATTTACATGCAGAAAATACAACGGAGAAGGTTTTCAATATTTTTTATATGCTGTTTAACATCGGCCTCACTGCATATATTATCGGAAACATGACAAATCTGGTGGTTCATAGCTCTGTCAGAACCTTTGCCATGAGGGACGCCTTCAACAAAATATTACAATATGCGAGCAAAAATGGACTCCCAGAAGGTTTGAAGGACCAAATGTTGGCACATACACAGCTGAAGTTCAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTGCCTAAAGCAATTAGAGCCGGTATTGCTCAGCATCTTTTCCACAACGTAGTTGAAAAAACAAATTTATTTAAAGGAGTCTCGGATGATTTTATATCCCAGATGGTATCAGATATGAAAGCAGAATACTACCCGTCAAAGGTTGACATCATCTTGCAAAATGAGATGCCGGCATATTTCTACATTTTGGTATCTGGATCAGTGGATGTGTTGATTTTAAAGAATGGGTCTGAACAGTTTTTGTTCAAACTAGATCCTGGAAGCATGGTAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGCTTATACGAATCGATCATCATCATTTCAAGCAGCTGGTGAAACCATTTAATGAAGATGGGAAGGCAATTATCACCAACTTTACTCAGTTTATGAAGGGCCTAAAAGGCGGGGTGCTGGAAGAAATACCGTATGTAACAGAATTTCTGAGTGATTTGGAAGACGAGCATCCGACACAAAATGAGGGCACAAATGATGACATTTCAAAGTACCATGAAGAAAATCCATATGAAGAAGGTAACCTTAATCCTGTGGATTGTACGGTCAGAGAAACAGAAAATTCCAGTCCACTGTCAAGCCTAGTCCCGATTAGAGTCAAAATCCACGGACATCACCCCAACGAAAACATTGAAAATGGAACAACACCAAAGCTCATTATCCTACCAGATTCAGTCGAAGATCTTTTCAGAGTAGCAGAGAACAAGTTTGGAAAAAGAGGAAGCAAAATTCTTATGGCTGATGGCTCAGAAGTAGAAGATCTATGCGCCCTAAGAGAGGACGATGAGTTATATATCATCTAA
Protein sequence

>Msa0524710

MTLPSLVRRRSSGEIRNLASISSSLLPAFGTNPDEGYFDLKKYVIAPYDRRYRLWQTFLVVLVVYSAWASPFELAFREMSIGSMLIADLVVDAFFAFDIILTFFVAYLDKSTYFLVDDHKKIAIRYVKHLFFPMDLASTLPFQQIYQLIAGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSVTRVCKLLCVTLFAVHFTGCVYFWLAFHHKSPGNTWIGKQVEDFKHRSVGSGYTYSMYWSIVTLTTVGYGDLHAENTTEKVFNIFYMLFNIGLTAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPEGLKDQMLAHTQLKFKTAELQQEEVLQDLPKAIRAGIAQHLFHNVVEKTNLFKGVSDDFISQMVSDMKAEYYPSKVDIILQNEMPAYFYILVSGSVDVLILKNGSEQFLFKLDPGSMVGEIGVMFNIPQPYTVRSRRLSQLIRIDHHHFKQLVKPFNEDGKAIITNFTQFMKGLKGGVLEEIPYVTEFLSDLEDEHPTQNEGTNDDISKYHEENPYEEGNLNPVDCTVRETENSSPLSSLVPIRVKIHGHHPNENIENGTTPKLIILPDSVEDLFRVAENKFGKRGSKILMADGSEVEDLCALREDDELYII*