AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1111910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111910 MtrunA17_Chr7g0245261 97.740 354 7 1 4 357 1 353 0.0 689
Msa1111910 MtrunA17_Chr7g0245291 76.833 341 66 5 2 341 17 345 2.62e-166 468
Msa1111910 MtrunA17_Chr7g0240091 34.934 229 129 8 111 322 223 448 5.87e-30 119
Msa1111910 MtrunA17_Chr4g0020011 33.333 243 142 6 96 322 139 377 2.42e-28 113
Msa1111910 MtrunA17_Chr2g0320711 31.739 230 135 8 111 322 210 435 1.03e-23 101
Msa1111910 MtrunA17_Chr4g0039291 30.568 229 142 4 109 322 162 388 2.61e-23 99.8
Msa1111910 MtrunA17_Chr3g0090071 29.825 228 143 6 109 322 163 387 6.03e-22 95.9
Msa1111910 MtrunA17_Chr3g0114241 29.661 236 145 6 107 322 482 716 7.67e-21 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1111910 AT3G08640.1 67.578 256 73 2 92 345 90 337 6.83e-124 360
Msa1111910 AT3G08630.1 72.581 248 63 3 100 345 95 339 4.42e-123 358
Msa1111910 AT2G37860.3 34.959 246 137 10 97 322 190 432 4.15e-30 119
Msa1111910 AT2G37860.4 34.959 246 137 10 97 322 190 432 4.15e-30 119
Msa1111910 AT5G12470.1 33.913 230 137 5 109 324 157 385 1.56e-27 112
Msa1111910 AT5G22790.1 34.498 229 131 7 111 322 207 433 1.40e-26 110
Msa1111910 AT3G56140.2 27.839 273 169 8 107 352 255 526 5.96e-21 94.4
Msa1111910 AT3G56140.1 27.839 273 169 8 107 352 474 745 1.20e-20 94.0
Msa1111910 AT3G56140.3 27.839 273 169 8 107 352 474 745 1.20e-20 94.0
Msa1111910 AT2G40400.2 28.270 237 149 6 107 323 465 700 2.04e-19 90.1
Msa1111910 AT2G40400.1 28.270 237 149 6 107 323 465 700 2.04e-19 90.1
Msa1111910 AT2G40400.3 27.273 187 118 4 107 276 465 650 3.62e-14 74.3
Msa1111910 AT2G37860.2 33.544 158 89 7 98 240 191 347 5.90e-14 72.4
Msa1111910 AT2G37860.1 33.544 158 89 7 98 240 191 347 5.90e-14 72.4

Find 119 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGCCATGTATTGGATTT+TGG 0.160598 7_3:-57666185 Msa1111910:three_prime_UTR
AAATCAAAAGATTCGTCTTT+TGG 0.178684 7_3:-57667183 Msa1111910:CDS
GGATATTTGGTACAAAATTT+TGG 0.195386 7_3:-57666266 Msa1111910:three_prime_UTR
TCTCACTTGGGCTGCTCATA+TGG 0.219592 7_3:-57666686 Msa1111910:CDS
GGTGTTACTGCTTGTGTCTT+AGG 0.224033 7_3:-57667072 Msa1111910:CDS
GTAGATTGAGATGGGATATT+TGG 0.235033 7_3:-57666279 Msa1111910:three_prime_UTR
TGCTTGTGTCTTAGGTGATA+TGG 0.238811 7_3:-57667064 Msa1111910:CDS
ATTGTGCAACATCAATAATT+TGG 0.249725 7_3:-57665979 Msa1111910:three_prime_UTR
ATGGCTTCAAGGCCTAATTT+TGG 0.265088 7_3:-57667045 Msa1111910:CDS
AGGAGTGGTGGAGGTGGTGG+TGG 0.265858 7_3:-57667252 Msa1111910:CDS
CTTAGGTACCAAACACTAAA+TGG 0.273009 7_3:-57666649 Msa1111910:CDS
AGTTCATTCAAACCAAAATT+AGG 0.283658 7_3:+57667033 None:intergenic
CTACTCAAATGAAAATGTTT+TGG 0.284586 7_3:-57666151 Msa1111910:three_prime_UTR
GGGTTTGGTGCTGGTCTTGC+TGG 0.288595 7_3:-57666802 Msa1111910:CDS
AAGGGAAAGGGAGGAGGCTT+TGG 0.288917 7_3:-57666443 Msa1111910:CDS
TGATCCACAGTTTCCTTTCA+AGG 0.295775 7_3:-57667115 Msa1111910:CDS
GTGGTGGTGGAAGTGAAAAT+TGG 0.309300 7_3:-57667236 Msa1111910:CDS
GATTAAGATGAGGAAGAAAA+TGG 0.310266 7_3:-57666758 Msa1111910:CDS
TTCACTTTGTTGATGTTGTT+TGG 0.316535 7_3:+57666410 None:intergenic
TTGTTTGGTGTCTCAAAGTT+TGG 0.325183 7_3:+57666733 None:intergenic
TTTCACACTTATGTATCTAT+TGG 0.333696 7_3:-57666968 Msa1111910:CDS
AATTTGTCACCTTATTGTTC+AGG 0.334409 7_3:+57666210 None:intergenic
CTTTACTCAATTCTCTCACT+TGG 0.338283 7_3:-57666699 Msa1111910:CDS
CTCACTTGGGCTGCTCATAT+GGG 0.340036 7_3:-57666685 Msa1111910:CDS
AGTGGTGGAGGTGGTGGTGG+TGG 0.340666 7_3:-57667249 Msa1111910:CDS
AGTCATCGGTGTTGGTGCTT+AGG 0.342617 7_3:-57666582 Msa1111910:CDS
AAAGTATCACATATCTAGTT+TGG 0.346528 7_3:-57666044 Msa1111910:three_prime_UTR
AGGGTTGTGAACAATGTTCT+TGG 0.363107 7_3:-57666562 Msa1111910:CDS
GGCTCAAACATGTGACTCTT+AGG 0.367133 7_3:+57666892 None:intergenic
TATCTATTGGCACCAACATT+AGG 0.370401 7_3:-57666955 Msa1111910:CDS
TTAGGTACTTTGGTGTATAA+AGG 0.371386 7_3:-57666844 Msa1111910:CDS
TGGTGGTGGAAGTGAAAATT+GGG 0.371524 7_3:-57667235 Msa1111910:CDS
GGTAGGAGTGGTGGAGGTGG+TGG 0.373035 7_3:-57667255 Msa1111910:CDS
GCTGCTGTTGGGTTTGGTGC+TGG 0.378702 7_3:-57666811 Msa1111910:CDS
GTCATCGGTGTTGGTGCTTA+GGG 0.382321 7_3:-57666581 Msa1111910:CDS
TGGGTTTCAGCAGTAATCTT+AGG 0.384948 7_3:-57666666 Msa1111910:CDS
AAATTAGTATGGCCATGTAT+TGG 0.386332 7_3:-57666192 Msa1111910:three_prime_UTR
AAATTACGACCTGAACAATA+AGG 0.386891 7_3:-57666219 Msa1111910:three_prime_UTR
ATTGGATAGGTTAGGTACTT+TGG 0.391020 7_3:-57666854 Msa1111910:CDS
ACTCAGCACCATTTAGTGTT+TGG 0.392898 7_3:+57666641 None:intergenic
TTGACAGGGTCACAGAGTTC+TGG 0.398819 7_3:-57666511 Msa1111910:CDS
ACTCACCTATCCAACAATAT+TGG 0.399312 7_3:+57666351 None:intergenic
ATAGCTTTGACCAATATTGT+TGG 0.399803 7_3:-57666361 Msa1111910:three_prime_UTR
CACAGATCAAATGTCAACTA+TGG 0.404843 7_3:-57667463 Msa1111910:intron
AATAAGGTGACAAATTAGTA+TGG 0.405338 7_3:-57666203 Msa1111910:three_prime_UTR
ACATATCTAGTTTGGAGTAT+TGG 0.405801 7_3:-57666036 Msa1111910:three_prime_UTR
GCTGGTACAGCACTTTCAAA+TGG 0.406836 7_3:-57666784 Msa1111910:CDS
TTTCAACCTTTGAGGCAAAT+GGG 0.407646 7_3:+57667320 None:intergenic
AAAGTAGGTGGAGCTTTGTT+TGG 0.417477 7_3:+57666718 None:intergenic
TTCATTTGAGTAGGTGGTGG+GGG 0.430102 7_3:+57666161 None:intergenic
TTCTGAATGGATGGAGATCA+AGG 0.437567 7_3:-57667146 Msa1111910:CDS
AGTGGTAGGAGTGGTGGAGG+TGG 0.438626 7_3:-57667258 Msa1111910:CDS
GGACAAGATGCAAAGATTGC+AGG 0.441836 7_3:+57666913 None:intergenic
GGTTGAAAGGGAAAGGGAGG+AGG 0.442157 7_3:-57666449 Msa1111910:CDS
TTGAGAAGGTTGAAAGGGAA+AGG 0.445930 7_3:-57666456 Msa1111910:CDS
TCTTAGGTGATATGGCTTCA+AGG 0.452850 7_3:-57667056 Msa1111910:CDS
AGGCAAATGGGGTGATGGGT+TGG 0.454846 7_3:+57667332 None:intergenic
TTTAGTTTATTGGATAGGTT+AGG 0.459730 7_3:-57666862 Msa1111910:CDS
GTGAGAGAATTGAGTAAAGT+AGG 0.460473 7_3:+57666703 None:intergenic
TTTGACCAATATTGTTGGAT+AGG 0.460487 7_3:-57666356 Msa1111910:three_prime_UTR
CTGGTACAGCACTTTCAAAT+GGG 0.460536 7_3:-57666783 Msa1111910:CDS
GGTAGTGGTAGGAGTGGTGG+AGG 0.463979 7_3:-57667261 Msa1111910:CDS
TGGTGAGAAGCCATCACAAT+TGG 0.468522 7_3:-57666491 Msa1111910:CDS
TGAGAAGGTTGAAAGGGAAA+GGG 0.469805 7_3:-57666455 Msa1111910:CDS
GGTGGTAGTGGTAGGAGTGG+TGG 0.474122 7_3:-57667264 Msa1111910:CDS
GGTGTTGGAAGTGGTGGTAG+TGG 0.474532 7_3:-57667276 Msa1111910:CDS
CATCACCCCATTTGCCTCAA+AGG 0.475084 7_3:-57667326 Msa1111910:CDS
ATTTCATTCGTCGGAGGTGA+TGG 0.478948 7_3:-57667297 Msa1111910:CDS
CTTTGAGGCAAATGGGGTGA+TGG 0.480889 7_3:+57667327 None:intergenic
AGTATTGGCTAAATAAAATC+AGG 0.483719 7_3:-57666021 Msa1111910:three_prime_UTR
TCCTTTAGCATTCAAGTCAT+CGG 0.486822 7_3:-57666596 Msa1111910:CDS
GCTAATAATGATAATGATGA+TGG 0.498198 7_3:-57667207 Msa1111910:CDS
TTGGAAGTGGTGGTAGTGGT+AGG 0.501072 7_3:-57667272 Msa1111910:CDS
ACCGATGACTTGAATGCTAA+AGG 0.501211 7_3:+57666595 None:intergenic
GCAGCAACAAATAAGAATGA+AGG 0.501919 7_3:-57666302 Msa1111910:three_prime_UTR
TTTACTCAATTCTCTCACTT+GGG 0.504007 7_3:-57666698 Msa1111910:CDS
GATTAGTTGAGAAGGTTGAA+AGG 0.504478 7_3:-57666462 Msa1111910:CDS
AGATAATAATGGTCTAGAAA+AGG 0.508402 7_3:+57666072 None:intergenic
AGCATTCAAGTCATCGGTGT+TGG 0.510195 7_3:-57666590 Msa1111910:CDS
TCTTCCATCAAAACCTTGAA+AGG 0.510674 7_3:+57667102 None:intergenic
GGAGGTGATGGTGTTGGAAG+TGG 0.511084 7_3:-57667285 Msa1111910:CDS
GAATGAAGGGTAGATTGAGA+TGG 0.517733 7_3:-57666288 Msa1111910:three_prime_UTR
TTTCATTTGAGTAGGTGGTG+GGG 0.520107 7_3:+57666160 None:intergenic
AATGAAGGGTAGATTGAGAT+GGG 0.520611 7_3:-57666287 Msa1111910:three_prime_UTR
TTCGTCGGAGGTGATGGTGT+TGG 0.521987 7_3:-57667291 Msa1111910:CDS
GGAGGATGGATTAGTTGAGA+AGG 0.522393 7_3:-57666470 Msa1111910:CDS
CGGTTATTTAACTGTGGAGG+TGG 0.526642 7_3:+57667372 None:intergenic
TGGGTCTGTTTCTGAATGGA+TGG 0.532651 7_3:-57667155 Msa1111910:CDS
AAGAGTCACATGTTTGAGCC+TGG 0.535287 7_3:-57666889 Msa1111910:CDS
TGAGAAGCCATCACAATTGG+AGG 0.536920 7_3:-57666488 Msa1111910:CDS
AGGTTGAAAATTTCATTCGT+CGG 0.538429 7_3:-57667306 Msa1111910:CDS
ATTAGTTGAGAAGGTTGAAA+GGG 0.539886 7_3:-57666461 Msa1111910:CDS
GAAGGTTGAAAGGGAAAGGG+AGG 0.545788 7_3:-57666452 Msa1111910:CDS
GCAGAAGAAGCTCCTAATGT+TGG 0.549484 7_3:+57666943 None:intergenic
TTTAACTGTGGAGGTGGTGA+TGG 0.550712 7_3:+57667378 None:intergenic
GGTGGTGATGGTAATGATGA+TGG 0.550866 7_3:+57667390 None:intergenic
TGGTGAGATATATAGAAGTA+CGG 0.554630 7_3:+57667352 None:intergenic
TTTGAGGCAAATGGGGTGAT+GGG 0.555890 7_3:+57667328 None:intergenic
GGTGATGGTGTTGGAAGTGG+TGG 0.556383 7_3:-57667282 Msa1111910:CDS
AGAGAATTGAGTAAAGTAGG+TGG 0.556420 7_3:+57666706 None:intergenic
GTTGTGAACAATGTTCTTGG+AGG 0.557461 7_3:-57666559 Msa1111910:CDS
TCCAATAAACTAAAAGCACC+AGG 0.562983 7_3:+57666871 None:intergenic
CAGCAACAAATAAGAATGAA+GGG 0.573555 7_3:-57666301 Msa1111910:three_prime_UTR
AGTGGTGGTAGTGGTAGGAG+TGG 0.574745 7_3:-57667267 Msa1111910:CDS
TTCAACCTTTGAGGCAAATG+GGG 0.575584 7_3:+57667321 None:intergenic
AAATGGTGCTGAGTTTGTGT+TGG 0.577853 7_3:-57666632 Msa1111910:CDS
GCACGGCTTTGACCAGATGA+AGG 0.588877 7_3:+57667423 None:intergenic
GGGGTCCAAAATCCAATACA+TGG 0.592012 7_3:+57666180 None:intergenic
AATCCATCCTCCAATTGTGA+TGG 0.593843 7_3:+57666481 None:intergenic
CAAATGGGTTGATTAAGATG+AGG 0.597867 7_3:-57666768 Msa1111910:CDS
TTGAAAATTTCATTCGTCGG+AGG 0.599565 7_3:-57667303 Msa1111910:CDS
AAGCCATCACAATTGGAGGA+TGG 0.611487 7_3:-57666484 Msa1111910:CDS
GAAGTACGGTTATTTAACTG+TGG 0.640467 7_3:+57667366 None:intergenic
GTACGGTTATTTAACTGTGG+AGG 0.641560 7_3:+57667369 None:intergenic
AAAACCTTGAAAGGAAACTG+TGG 0.648612 7_3:+57667111 None:intergenic
GGTGGAAGTGAAAATTGGGG+TGG 0.659226 7_3:-57667231 Msa1111910:CDS
ATGATGGAAATGAAAGTGCA+CGG 0.675516 7_3:+57667406 None:intergenic
TCTGAATGGATGGAGATCAA+GGG 0.679128 7_3:-57667145 Msa1111910:CDS
GGTGGTGGAAGTGAAAATTG+GGG 0.698233 7_3:-57667234 Msa1111910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTCCAAAAAAAGAT+CGG + chr7_3:57666118-57666137 None:intergenic 15.0%
!!! TGTTTTTTTCTTCTAATTTT+TGG - chr7_3:57666241-57666260 Msa1111910:three_prime_UTR 15.0%
!!! TACTTTTACAAAGATAATAA+TGG + chr7_3:57667851-57667870 None:intergenic 15.0%
!! AAAAAATTCCAAAAAAAGAT+CGG + chr7_3:57666118-57666137 None:intergenic 15.0%
!!! TGTTTTTTTCTTCTAATTTT+TGG - chr7_3:57666241-57666260 Msa1111910:three_prime_UTR 15.0%
!!! TACTTTTACAAAGATAATAA+TGG + chr7_3:57667851-57667870 None:intergenic 15.0%
!!! TTTAGTTTTTCTGAATTTTC+TGG - chr7_3:57667585-57667604 Msa1111910:intron 20.0%
!!! AAATGAAAATGTTTTGGTTT+TGG - chr7_3:57667764-57667783 Msa1111910:intron 20.0%
!!! TTTAGTTTTTCTGAATTTTC+TGG - chr7_3:57667585-57667604 Msa1111910:intron 20.0%
!!! AAATGAAAATGTTTTGGTTT+TGG - chr7_3:57667764-57667783 Msa1111910:intron 20.0%
!!! TGTTTTTCAGAGAAAGAATT+AGG + chr7_3:57666009-57666028 None:intergenic 25.0%
!!! ACAAAAATCCGATCTTTTTT+TGG - chr7_3:57666107-57666126 Msa1111910:three_prime_UTR 25.0%
!! AATGAAATTTTCAACCTTTG+AGG + chr7_3:57666600-57666619 None:intergenic 25.0%
!! GCTAATAATGATAATGATGA+TGG - chr7_3:57666702-57666721 Msa1111910:CDS 25.0%
!! AAATCAAAAGATTCGTCTTT+TGG - chr7_3:57666726-57666745 Msa1111910:CDS 25.0%
!! AATCAAAAGATTCGTCTTTT+GGG - chr7_3:57666727-57666746 Msa1111910:CDS 25.0%
! AGTTCATTCAAACCAAAATT+AGG + chr7_3:57666879-57666898 None:intergenic 25.0%
! TTTCACACTTATGTATCTAT+TGG - chr7_3:57666941-57666960 Msa1111910:CDS 25.0%
!! TTTAGTTTATTGGATAGGTT+AGG - chr7_3:57667047-57667066 Msa1111910:CDS 25.0%
!! GGATATTTGGTACAAAATTT+TGG - chr7_3:57667643-57667662 Msa1111910:intron 25.0%
! AATAAGGTGACAAATTAGTA+TGG - chr7_3:57667706-57667725 Msa1111910:intron 25.0%
!! CAAAACATTTTCATTTGAGT+AGG + chr7_3:57667760-57667779 None:intergenic 25.0%
!! CTACTCAAATGAAAATGTTT+TGG - chr7_3:57667758-57667777 Msa1111910:intron 25.0%
!!! TTTGTTTCTTTTCTATCAGT+AGG - chr7_3:57667804-57667823 Msa1111910:intron 25.0%
! AGATAATAATGGTCTAGAAA+AGG + chr7_3:57667840-57667859 None:intergenic 25.0%
!! AAAGTATCACATATCTAGTT+TGG - chr7_3:57667865-57667884 Msa1111910:intron 25.0%
!!! AGTATTGGCTAAATAAAATC+AGG - chr7_3:57667888-57667907 Msa1111910:intron 25.0%
! ATTGTGCAACATCAATAATT+TGG - chr7_3:57667930-57667949 Msa1111910:intron 25.0%
!!! TGTTTTTCAGAGAAAGAATT+AGG + chr7_3:57666009-57666028 None:intergenic 25.0%
!!! ACAAAAATCCGATCTTTTTT+TGG - chr7_3:57666107-57666126 Msa1111910:three_prime_UTR 25.0%
!! AATGAAATTTTCAACCTTTG+AGG + chr7_3:57666600-57666619 None:intergenic 25.0%
!! GCTAATAATGATAATGATGA+TGG - chr7_3:57666702-57666721 Msa1111910:CDS 25.0%
!! AAATCAAAAGATTCGTCTTT+TGG - chr7_3:57666726-57666745 Msa1111910:CDS 25.0%
!! AATCAAAAGATTCGTCTTTT+GGG - chr7_3:57666727-57666746 Msa1111910:CDS 25.0%
! AGTTCATTCAAACCAAAATT+AGG + chr7_3:57666879-57666898 None:intergenic 25.0%
! TTTCACACTTATGTATCTAT+TGG - chr7_3:57666941-57666960 Msa1111910:CDS 25.0%
!! TTTAGTTTATTGGATAGGTT+AGG - chr7_3:57667047-57667066 Msa1111910:CDS 25.0%
!! GGATATTTGGTACAAAATTT+TGG - chr7_3:57667643-57667662 Msa1111910:intron 25.0%
! AATAAGGTGACAAATTAGTA+TGG - chr7_3:57667706-57667725 Msa1111910:intron 25.0%
!! CAAAACATTTTCATTTGAGT+AGG + chr7_3:57667760-57667779 None:intergenic 25.0%
!! CTACTCAAATGAAAATGTTT+TGG - chr7_3:57667758-57667777 Msa1111910:intron 25.0%
!!! TTTGTTTCTTTTCTATCAGT+AGG - chr7_3:57667804-57667823 Msa1111910:intron 25.0%
! AGATAATAATGGTCTAGAAA+AGG + chr7_3:57667840-57667859 None:intergenic 25.0%
!! AAAGTATCACATATCTAGTT+TGG - chr7_3:57667865-57667884 Msa1111910:intron 25.0%
!!! AGTATTGGCTAAATAAAATC+AGG - chr7_3:57667888-57667907 Msa1111910:intron 25.0%
! ATTGTGCAACATCAATAATT+TGG - chr7_3:57667930-57667949 Msa1111910:intron 25.0%
TGGTGAGATATATAGAAGTA+CGG + chr7_3:57666560-57666579 None:intergenic 30.0%
AGGTTGAAAATTTCATTCGT+CGG - chr7_3:57666603-57666622 Msa1111910:CDS 30.0%
!!! GTGCTTTTAGTTTATTGGAT+AGG - chr7_3:57667042-57667061 Msa1111910:CDS 30.0%
! TTAGGTACTTTGGTGTATAA+AGG - chr7_3:57667065-57667084 Msa1111910:CDS 30.0%
GATTAAGATGAGGAAGAAAA+TGG - chr7_3:57667151-57667170 Msa1111910:CDS 30.0%
TTTACTCAATTCTCTCACTT+GGG - chr7_3:57667211-57667230 Msa1111910:CDS 30.0%
ATTAGTTGAGAAGGTTGAAA+GGG - chr7_3:57667448-57667467 Msa1111910:CDS 30.0%
TTCACTTTGTTGATGTTGTT+TGG + chr7_3:57667502-57667521 None:intergenic 30.0%
!! ATAGCTTTGACCAATATTGT+TGG - chr7_3:57667548-57667567 Msa1111910:intron 30.0%
TTTGACCAATATTGTTGGAT+AGG - chr7_3:57667553-57667572 Msa1111910:intron 30.0%
CAGCAACAAATAAGAATGAA+GGG - chr7_3:57667608-57667627 Msa1111910:intron 30.0%
!! ATTTGGTACAAAATTTTGGC+AGG - chr7_3:57667647-57667666 Msa1111910:intron 30.0%
!! AAAATTTTGGCAGGTTTTGA+TGG - chr7_3:57667656-57667675 Msa1111910:intron 30.0%
AAATTACGACCTGAACAATA+AGG - chr7_3:57667690-57667709 Msa1111910:intron 30.0%
AATTTGTCACCTTATTGTTC+AGG + chr7_3:57667702-57667721 None:intergenic 30.0%
AAATTAGTATGGCCATGTAT+TGG - chr7_3:57667717-57667736 Msa1111910:intron 30.0%
! AACATTTTCATTTGAGTAGG+TGG + chr7_3:57667757-57667776 None:intergenic 30.0%
! ACATATCTAGTTTGGAGTAT+TGG - chr7_3:57667873-57667892 Msa1111910:intron 30.0%
TGGTGAGATATATAGAAGTA+CGG + chr7_3:57666560-57666579 None:intergenic 30.0%
AGGTTGAAAATTTCATTCGT+CGG - chr7_3:57666603-57666622 Msa1111910:CDS 30.0%
!!! GTGCTTTTAGTTTATTGGAT+AGG - chr7_3:57667042-57667061 Msa1111910:CDS 30.0%
! TTAGGTACTTTGGTGTATAA+AGG - chr7_3:57667065-57667084 Msa1111910:CDS 30.0%
GATTAAGATGAGGAAGAAAA+TGG - chr7_3:57667151-57667170 Msa1111910:CDS 30.0%
TTTACTCAATTCTCTCACTT+GGG - chr7_3:57667211-57667230 Msa1111910:CDS 30.0%
ATTAGTTGAGAAGGTTGAAA+GGG - chr7_3:57667448-57667467 Msa1111910:CDS 30.0%
TTCACTTTGTTGATGTTGTT+TGG + chr7_3:57667502-57667521 None:intergenic 30.0%
!! ATAGCTTTGACCAATATTGT+TGG - chr7_3:57667548-57667567 Msa1111910:intron 30.0%
TTTGACCAATATTGTTGGAT+AGG - chr7_3:57667553-57667572 Msa1111910:intron 30.0%
CAGCAACAAATAAGAATGAA+GGG - chr7_3:57667608-57667627 Msa1111910:intron 30.0%
!! ATTTGGTACAAAATTTTGGC+AGG - chr7_3:57667647-57667666 Msa1111910:intron 30.0%
!! AAAATTTTGGCAGGTTTTGA+TGG - chr7_3:57667656-57667675 Msa1111910:intron 30.0%
AAATTACGACCTGAACAATA+AGG - chr7_3:57667690-57667709 Msa1111910:intron 30.0%
AATTTGTCACCTTATTGTTC+AGG + chr7_3:57667702-57667721 None:intergenic 30.0%
AAATTAGTATGGCCATGTAT+TGG - chr7_3:57667717-57667736 Msa1111910:intron 30.0%
! AACATTTTCATTTGAGTAGG+TGG + chr7_3:57667757-57667776 None:intergenic 30.0%
! ACATATCTAGTTTGGAGTAT+TGG - chr7_3:57667873-57667892 Msa1111910:intron 30.0%
AACCTCAAACTGTAATGTTG+CGG + chr7_3:57666039-57666058 None:intergenic 35.0%
! TTTTTGTGATTACCTGGATC+TGG + chr7_3:57666094-57666113 None:intergenic 35.0%
! ATCGGATTTTTGTGATTACC+TGG + chr7_3:57666100-57666119 None:intergenic 35.0%
CACAGATCAAATGTCAACTA+TGG - chr7_3:57666446-57666465 Msa1111910:CDS 35.0%
! ATGATGGAAATGAAAGTGCA+CGG + chr7_3:57666506-57666525 None:intergenic 35.0%
GAAGTACGGTTATTTAACTG+TGG + chr7_3:57666546-57666565 None:intergenic 35.0%
!! TTTCAACCTTTGAGGCAAAT+GGG + chr7_3:57666592-57666611 None:intergenic 35.0%
!!! TTTTCAACCTTTGAGGCAAA+TGG + chr7_3:57666593-57666612 None:intergenic 35.0%
TTGAAAATTTCATTCGTCGG+AGG - chr7_3:57666606-57666625 Msa1111910:CDS 35.0%
!!! AGATTCGTCTTTTGGGATTT+TGG - chr7_3:57666734-57666753 Msa1111910:CDS 35.0%
!!! GATTCGTCTTTTGGGATTTT+GGG - chr7_3:57666735-57666754 Msa1111910:CDS 35.0%
!!! ATTTTGGGTCTGTTTCTGAA+TGG - chr7_3:57666750-57666769 Msa1111910:CDS 35.0%
AAAACCTTGAAAGGAAACTG+TGG + chr7_3:57666801-57666820 None:intergenic 35.0%
!! GTTTCCTTTCAAGGTTTTGA+TGG - chr7_3:57666803-57666822 Msa1111910:CDS 35.0%
TCTTCCATCAAAACCTTGAA+AGG + chr7_3:57666810-57666829 None:intergenic 35.0%
!! GTGTTTTCAACTCTTGTTGT+TGG - chr7_3:57666906-57666925 Msa1111910:CDS 35.0%
TATCTATTGGCACCAACATT+AGG - chr7_3:57666954-57666973 Msa1111910:CDS 35.0%
!! TCCAATAAACTAAAAGCACC+AGG + chr7_3:57667041-57667060 None:intergenic 35.0%
ATTGGATAGGTTAGGTACTT+TGG - chr7_3:57667055-57667074 Msa1111910:CDS 35.0%
!! CAAATGGGTTGATTAAGATG+AGG - chr7_3:57667141-57667160 Msa1111910:CDS 35.0%
!! TTGTTTGGTGTCTCAAAGTT+TGG + chr7_3:57667179-57667198 None:intergenic 35.0%
AGAGAATTGAGTAAAGTAGG+TGG + chr7_3:57667206-57667225 None:intergenic 35.0%
GTGAGAGAATTGAGTAAAGT+AGG + chr7_3:57667209-57667228 None:intergenic 35.0%
CTTTACTCAATTCTCTCACT+TGG - chr7_3:57667210-57667229 Msa1111910:CDS 35.0%
CTTAGGTACCAAACACTAAA+TGG - chr7_3:57667260-57667279 Msa1111910:CDS 35.0%
TCCTTTAGCATTCAAGTCAT+CGG - chr7_3:57667313-57667332 Msa1111910:CDS 35.0%
! AGGAATGTCTTTTGTGGTTT+TGG - chr7_3:57667370-57667389 Msa1111910:CDS 35.0%
! GATTAGTTGAGAAGGTTGAA+AGG - chr7_3:57667447-57667466 Msa1111910:CDS 35.0%
ACTCACCTATCCAACAATAT+TGG + chr7_3:57667561-57667580 None:intergenic 35.0%
GCAGCAACAAATAAGAATGA+AGG - chr7_3:57667607-57667626 Msa1111910:intron 35.0%
AATGAAGGGTAGATTGAGAT+GGG - chr7_3:57667622-57667641 Msa1111910:intron 35.0%
GTAGATTGAGATGGGATATT+TGG - chr7_3:57667630-57667649 Msa1111910:intron 35.0%
! TATGGCCATGTATTGGATTT+TGG - chr7_3:57667724-57667743 Msa1111910:intron 35.0%
! TTTTCATTTGAGTAGGTGGT+GGG + chr7_3:57667753-57667772 None:intergenic 35.0%
! ATTTTCATTTGAGTAGGTGG+TGG + chr7_3:57667754-57667773 None:intergenic 35.0%
AACCTCAAACTGTAATGTTG+CGG + chr7_3:57666039-57666058 None:intergenic 35.0%
! TTTTTGTGATTACCTGGATC+TGG + chr7_3:57666094-57666113 None:intergenic 35.0%
! ATCGGATTTTTGTGATTACC+TGG + chr7_3:57666100-57666119 None:intergenic 35.0%
CACAGATCAAATGTCAACTA+TGG - chr7_3:57666446-57666465 Msa1111910:CDS 35.0%
! ATGATGGAAATGAAAGTGCA+CGG + chr7_3:57666506-57666525 None:intergenic 35.0%
GAAGTACGGTTATTTAACTG+TGG + chr7_3:57666546-57666565 None:intergenic 35.0%
!! TTTCAACCTTTGAGGCAAAT+GGG + chr7_3:57666592-57666611 None:intergenic 35.0%
!!! TTTTCAACCTTTGAGGCAAA+TGG + chr7_3:57666593-57666612 None:intergenic 35.0%
TTGAAAATTTCATTCGTCGG+AGG - chr7_3:57666606-57666625 Msa1111910:CDS 35.0%
!!! AGATTCGTCTTTTGGGATTT+TGG - chr7_3:57666734-57666753 Msa1111910:CDS 35.0%
!!! GATTCGTCTTTTGGGATTTT+GGG - chr7_3:57666735-57666754 Msa1111910:CDS 35.0%
!!! ATTTTGGGTCTGTTTCTGAA+TGG - chr7_3:57666750-57666769 Msa1111910:CDS 35.0%
AAAACCTTGAAAGGAAACTG+TGG + chr7_3:57666801-57666820 None:intergenic 35.0%
!! GTTTCCTTTCAAGGTTTTGA+TGG - chr7_3:57666803-57666822 Msa1111910:CDS 35.0%
TCTTCCATCAAAACCTTGAA+AGG + chr7_3:57666810-57666829 None:intergenic 35.0%
!! GTGTTTTCAACTCTTGTTGT+TGG - chr7_3:57666906-57666925 Msa1111910:CDS 35.0%
TATCTATTGGCACCAACATT+AGG - chr7_3:57666954-57666973 Msa1111910:CDS 35.0%
!! TCCAATAAACTAAAAGCACC+AGG + chr7_3:57667041-57667060 None:intergenic 35.0%
ATTGGATAGGTTAGGTACTT+TGG - chr7_3:57667055-57667074 Msa1111910:CDS 35.0%
!! CAAATGGGTTGATTAAGATG+AGG - chr7_3:57667141-57667160 Msa1111910:CDS 35.0%
!! TTGTTTGGTGTCTCAAAGTT+TGG + chr7_3:57667179-57667198 None:intergenic 35.0%
AGAGAATTGAGTAAAGTAGG+TGG + chr7_3:57667206-57667225 None:intergenic 35.0%
GTGAGAGAATTGAGTAAAGT+AGG + chr7_3:57667209-57667228 None:intergenic 35.0%
CTTTACTCAATTCTCTCACT+TGG - chr7_3:57667210-57667229 Msa1111910:CDS 35.0%
CTTAGGTACCAAACACTAAA+TGG - chr7_3:57667260-57667279 Msa1111910:CDS 35.0%
TCCTTTAGCATTCAAGTCAT+CGG - chr7_3:57667313-57667332 Msa1111910:CDS 35.0%
! AGGAATGTCTTTTGTGGTTT+TGG - chr7_3:57667370-57667389 Msa1111910:CDS 35.0%
! GATTAGTTGAGAAGGTTGAA+AGG - chr7_3:57667447-57667466 Msa1111910:CDS 35.0%
ACTCACCTATCCAACAATAT+TGG + chr7_3:57667561-57667580 None:intergenic 35.0%
GCAGCAACAAATAAGAATGA+AGG - chr7_3:57667607-57667626 Msa1111910:intron 35.0%
AATGAAGGGTAGATTGAGAT+GGG - chr7_3:57667622-57667641 Msa1111910:intron 35.0%
GTAGATTGAGATGGGATATT+TGG - chr7_3:57667630-57667649 Msa1111910:intron 35.0%
! TATGGCCATGTATTGGATTT+TGG - chr7_3:57667724-57667743 Msa1111910:intron 35.0%
! TTTTCATTTGAGTAGGTGGT+GGG + chr7_3:57667753-57667772 None:intergenic 35.0%
! ATTTTCATTTGAGTAGGTGG+TGG + chr7_3:57667754-57667773 None:intergenic 35.0%
GCTTGAAAGATTCTCAGCAA+TGG + chr7_3:57666179-57666198 None:intergenic 40.0%
GTACGGTTATTTAACTGTGG+AGG + chr7_3:57666543-57666562 None:intergenic 40.0%
!! TTCAACCTTTGAGGCAAATG+GGG + chr7_3:57666591-57666610 None:intergenic 40.0%
!! TGGTGGTGGAAGTGAAAATT+GGG - chr7_3:57666674-57666693 Msa1111910:CDS 40.0%
TTCTGAATGGATGGAGATCA+AGG - chr7_3:57666763-57666782 Msa1111910:CDS 40.0%
TCTGAATGGATGGAGATCAA+GGG - chr7_3:57666764-57666783 Msa1111910:CDS 40.0%
TGATCCACAGTTTCCTTTCA+AGG - chr7_3:57666794-57666813 Msa1111910:CDS 40.0%
!! CAAGGTTTTGATGGAAGAGT+TGG - chr7_3:57666812-57666831 Msa1111910:CDS 40.0%
!! GTTTTGATGGAAGAGTTGGT+TGG - chr7_3:57666816-57666835 Msa1111910:CDS 40.0%
TGCTTGTGTCTTAGGTGATA+TGG - chr7_3:57666845-57666864 Msa1111910:CDS 40.0%
TCTTAGGTGATATGGCTTCA+AGG - chr7_3:57666853-57666872 Msa1111910:CDS 40.0%
! ATGGCTTCAAGGCCTAATTT+TGG - chr7_3:57666864-57666883 Msa1111910:CDS 40.0%
!!! GCCTGGTGCTTTTAGTTTAT+TGG - chr7_3:57667037-57667056 Msa1111910:CDS 40.0%
!! GTACCATTTTTGCTGCTGTT+GGG - chr7_3:57667087-57667106 Msa1111910:CDS 40.0%
AAACCCAACAGCAGCAAAAA+TGG + chr7_3:57667093-57667112 None:intergenic 40.0%
! ATTTTTGCTGCTGTTGGGTT+TGG - chr7_3:57667092-57667111 Msa1111910:CDS 40.0%
CTGGTACAGCACTTTCAAAT+GGG - chr7_3:57667126-57667145 Msa1111910:CDS 40.0%
!! AAAGTAGGTGGAGCTTTGTT+TGG + chr7_3:57667194-57667213 None:intergenic 40.0%
TGGGTTTCAGCAGTAATCTT+AGG - chr7_3:57667243-57667262 Msa1111910:CDS 40.0%
ACTCAGCACCATTTAGTGTT+TGG + chr7_3:57667271-57667290 None:intergenic 40.0%
! AAATGGTGCTGAGTTTGTGT+TGG - chr7_3:57667277-57667296 Msa1111910:CDS 40.0%
ACCGATGACTTGAATGCTAA+AGG + chr7_3:57667317-57667336 None:intergenic 40.0%
AGGGTTGTGAACAATGTTCT+TGG - chr7_3:57667347-57667366 Msa1111910:CDS 40.0%
GTTGTGAACAATGTTCTTGG+AGG - chr7_3:57667350-57667369 Msa1111910:CDS 40.0%
! TCTTGGAGGAATGTCTTTTG+TGG - chr7_3:57667364-57667383 Msa1111910:CDS 40.0%
!!! TGTCTTTTGTGGTTTTGGCA+AGG - chr7_3:57667375-57667394 Msa1111910:CDS 40.0%
AATCCATCCTCCAATTGTGA+TGG + chr7_3:57667431-57667450 None:intergenic 40.0%
TTGAGAAGGTTGAAAGGGAA+AGG - chr7_3:57667453-57667472 Msa1111910:CDS 40.0%
TGAGAAGGTTGAAAGGGAAA+GGG - chr7_3:57667454-57667473 Msa1111910:CDS 40.0%
GAATGAAGGGTAGATTGAGA+TGG - chr7_3:57667621-57667640 Msa1111910:intron 40.0%
TTTCATTTGAGTAGGTGGTG+GGG + chr7_3:57667752-57667771 None:intergenic 40.0%
GCTTGAAAGATTCTCAGCAA+TGG + chr7_3:57666179-57666198 None:intergenic 40.0%
GTACGGTTATTTAACTGTGG+AGG + chr7_3:57666543-57666562 None:intergenic 40.0%
!! TTCAACCTTTGAGGCAAATG+GGG + chr7_3:57666591-57666610 None:intergenic 40.0%
!! TGGTGGTGGAAGTGAAAATT+GGG - chr7_3:57666674-57666693 Msa1111910:CDS 40.0%
TTCTGAATGGATGGAGATCA+AGG - chr7_3:57666763-57666782 Msa1111910:CDS 40.0%
TCTGAATGGATGGAGATCAA+GGG - chr7_3:57666764-57666783 Msa1111910:CDS 40.0%
TGATCCACAGTTTCCTTTCA+AGG - chr7_3:57666794-57666813 Msa1111910:CDS 40.0%
!! CAAGGTTTTGATGGAAGAGT+TGG - chr7_3:57666812-57666831 Msa1111910:CDS 40.0%
!! GTTTTGATGGAAGAGTTGGT+TGG - chr7_3:57666816-57666835 Msa1111910:CDS 40.0%
TGCTTGTGTCTTAGGTGATA+TGG - chr7_3:57666845-57666864 Msa1111910:CDS 40.0%
TCTTAGGTGATATGGCTTCA+AGG - chr7_3:57666853-57666872 Msa1111910:CDS 40.0%
! ATGGCTTCAAGGCCTAATTT+TGG - chr7_3:57666864-57666883 Msa1111910:CDS 40.0%
!!! GCCTGGTGCTTTTAGTTTAT+TGG - chr7_3:57667037-57667056 Msa1111910:CDS 40.0%
!! GTACCATTTTTGCTGCTGTT+GGG - chr7_3:57667087-57667106 Msa1111910:CDS 40.0%
AAACCCAACAGCAGCAAAAA+TGG + chr7_3:57667093-57667112 None:intergenic 40.0%
! ATTTTTGCTGCTGTTGGGTT+TGG - chr7_3:57667092-57667111 Msa1111910:CDS 40.0%
CTGGTACAGCACTTTCAAAT+GGG - chr7_3:57667126-57667145 Msa1111910:CDS 40.0%
!! AAAGTAGGTGGAGCTTTGTT+TGG + chr7_3:57667194-57667213 None:intergenic 40.0%
TGGGTTTCAGCAGTAATCTT+AGG - chr7_3:57667243-57667262 Msa1111910:CDS 40.0%
ACTCAGCACCATTTAGTGTT+TGG + chr7_3:57667271-57667290 None:intergenic 40.0%
! AAATGGTGCTGAGTTTGTGT+TGG - chr7_3:57667277-57667296 Msa1111910:CDS 40.0%
ACCGATGACTTGAATGCTAA+AGG + chr7_3:57667317-57667336 None:intergenic 40.0%
AGGGTTGTGAACAATGTTCT+TGG - chr7_3:57667347-57667366 Msa1111910:CDS 40.0%
GTTGTGAACAATGTTCTTGG+AGG - chr7_3:57667350-57667369 Msa1111910:CDS 40.0%
! TCTTGGAGGAATGTCTTTTG+TGG - chr7_3:57667364-57667383 Msa1111910:CDS 40.0%
!!! TGTCTTTTGTGGTTTTGGCA+AGG - chr7_3:57667375-57667394 Msa1111910:CDS 40.0%
AATCCATCCTCCAATTGTGA+TGG + chr7_3:57667431-57667450 None:intergenic 40.0%
TTGAGAAGGTTGAAAGGGAA+AGG - chr7_3:57667453-57667472 Msa1111910:CDS 40.0%
TGAGAAGGTTGAAAGGGAAA+GGG - chr7_3:57667454-57667473 Msa1111910:CDS 40.0%
GAATGAAGGGTAGATTGAGA+TGG - chr7_3:57667621-57667640 Msa1111910:intron 40.0%
TTTCATTTGAGTAGGTGGTG+GGG + chr7_3:57667752-57667771 None:intergenic 40.0%
TAGGAGAGAAGAGAGTGAGT+TGG + chr7_3:57665990-57666009 None:intergenic 45.0%
TGCCGCAACATTACAGTTTG+AGG - chr7_3:57666034-57666053 Msa1111910:three_prime_UTR 45.0%
AAACACCGTGATTCACGTAC+CGG + chr7_3:57666226-57666245 None:intergenic 45.0%
! CTGCGTTTTACACCTTCATC+TGG - chr7_3:57666474-57666493 Msa1111910:CDS 45.0%
!! GGTGGTGATGGTAATGATGA+TGG + chr7_3:57666522-57666541 None:intergenic 45.0%
TTTAACTGTGGAGGTGGTGA+TGG + chr7_3:57666534-57666553 None:intergenic 45.0%
CGGTTATTTAACTGTGGAGG+TGG + chr7_3:57666540-57666559 None:intergenic 45.0%
! TTTGAGGCAAATGGGGTGAT+GGG + chr7_3:57666584-57666603 None:intergenic 45.0%
ATTTCATTCGTCGGAGGTGA+TGG - chr7_3:57666612-57666631 Msa1111910:CDS 45.0%
!! GTGGTGGTGGAAGTGAAAAT+TGG - chr7_3:57666673-57666692 Msa1111910:CDS 45.0%
!! GGTGGTGGAAGTGAAAATTG+GGG - chr7_3:57666675-57666694 Msa1111910:CDS 45.0%
!! TGGGTCTGTTTCTGAATGGA+TGG - chr7_3:57666754-57666773 Msa1111910:CDS 45.0%
!! GGTGTTACTGCTTGTGTCTT+AGG - chr7_3:57666837-57666856 Msa1111910:CDS 45.0%
GCAGAAGAAGCTCCTAATGT+TGG + chr7_3:57666969-57666988 None:intergenic 45.0%
GGACAAGATGCAAAGATTGC+AGG + chr7_3:57666999-57667018 None:intergenic 45.0%
GGCTCAAACATGTGACTCTT+AGG + chr7_3:57667020-57667039 None:intergenic 45.0%
AAGAGTCACATGTTTGAGCC+TGG - chr7_3:57667020-57667039 Msa1111910:CDS 45.0%
!! GGTACCATTTTTGCTGCTGT+TGG - chr7_3:57667086-57667105 Msa1111910:CDS 45.0%
GCTGGTACAGCACTTTCAAA+TGG - chr7_3:57667125-57667144 Msa1111910:CDS 45.0%
AGCATTCAAGTCATCGGTGT+TGG - chr7_3:57667319-57667338 Msa1111910:CDS 45.0%
!!! TGGTTTTGGCAAGGTTGACA+GGG - chr7_3:57667384-57667403 Msa1111910:CDS 45.0%
TGGTGAGAAGCCATCACAAT+TGG - chr7_3:57667418-57667437 Msa1111910:CDS 45.0%
TGAGAAGCCATCACAATTGG+AGG - chr7_3:57667421-57667440 Msa1111910:CDS 45.0%
AAGCCATCACAATTGGAGGA+TGG - chr7_3:57667425-57667444 Msa1111910:CDS 45.0%
!! GGAGGATGGATTAGTTGAGA+AGG - chr7_3:57667439-57667458 Msa1111910:CDS 45.0%
GGGGTCCAAAATCCAATACA+TGG + chr7_3:57667732-57667751 None:intergenic 45.0%
! TTCATTTGAGTAGGTGGTGG+GGG + chr7_3:57667751-57667770 None:intergenic 45.0%
TAGGAGAGAAGAGAGTGAGT+TGG + chr7_3:57665990-57666009 None:intergenic 45.0%
TGCCGCAACATTACAGTTTG+AGG - chr7_3:57666034-57666053 Msa1111910:three_prime_UTR 45.0%
AAACACCGTGATTCACGTAC+CGG + chr7_3:57666226-57666245 None:intergenic 45.0%
! CTGCGTTTTACACCTTCATC+TGG - chr7_3:57666474-57666493 Msa1111910:CDS 45.0%
!! GGTGGTGATGGTAATGATGA+TGG + chr7_3:57666522-57666541 None:intergenic 45.0%
TTTAACTGTGGAGGTGGTGA+TGG + chr7_3:57666534-57666553 None:intergenic 45.0%
CGGTTATTTAACTGTGGAGG+TGG + chr7_3:57666540-57666559 None:intergenic 45.0%
! TTTGAGGCAAATGGGGTGAT+GGG + chr7_3:57666584-57666603 None:intergenic 45.0%
ATTTCATTCGTCGGAGGTGA+TGG - chr7_3:57666612-57666631 Msa1111910:CDS 45.0%
!! GTGGTGGTGGAAGTGAAAAT+TGG - chr7_3:57666673-57666692 Msa1111910:CDS 45.0%
!! GGTGGTGGAAGTGAAAATTG+GGG - chr7_3:57666675-57666694 Msa1111910:CDS 45.0%
!! TGGGTCTGTTTCTGAATGGA+TGG - chr7_3:57666754-57666773 Msa1111910:CDS 45.0%
!! GGTGTTACTGCTTGTGTCTT+AGG - chr7_3:57666837-57666856 Msa1111910:CDS 45.0%
GCAGAAGAAGCTCCTAATGT+TGG + chr7_3:57666969-57666988 None:intergenic 45.0%
GGACAAGATGCAAAGATTGC+AGG + chr7_3:57666999-57667018 None:intergenic 45.0%
GGCTCAAACATGTGACTCTT+AGG + chr7_3:57667020-57667039 None:intergenic 45.0%
AAGAGTCACATGTTTGAGCC+TGG - chr7_3:57667020-57667039 Msa1111910:CDS 45.0%
!! GGTACCATTTTTGCTGCTGT+TGG - chr7_3:57667086-57667105 Msa1111910:CDS 45.0%
GCTGGTACAGCACTTTCAAA+TGG - chr7_3:57667125-57667144 Msa1111910:CDS 45.0%
AGCATTCAAGTCATCGGTGT+TGG - chr7_3:57667319-57667338 Msa1111910:CDS 45.0%
!!! TGGTTTTGGCAAGGTTGACA+GGG - chr7_3:57667384-57667403 Msa1111910:CDS 45.0%
TGGTGAGAAGCCATCACAAT+TGG - chr7_3:57667418-57667437 Msa1111910:CDS 45.0%
TGAGAAGCCATCACAATTGG+AGG - chr7_3:57667421-57667440 Msa1111910:CDS 45.0%
AAGCCATCACAATTGGAGGA+TGG - chr7_3:57667425-57667444 Msa1111910:CDS 45.0%
!! GGAGGATGGATTAGTTGAGA+AGG - chr7_3:57667439-57667458 Msa1111910:CDS 45.0%
GGGGTCCAAAATCCAATACA+TGG + chr7_3:57667732-57667751 None:intergenic 45.0%
! TTCATTTGAGTAGGTGGTGG+GGG + chr7_3:57667751-57667770 None:intergenic 45.0%
! GAGAGAAGAGAGTGAGTTGG+TGG + chr7_3:57665987-57666006 None:intergenic 50.0%
AAGCAACGCCGTCATGTATG+CGG - chr7_3:57666195-57666214 Msa1111910:three_prime_UTR 50.0%
!! CTTTGAGGCAAATGGGGTGA+TGG + chr7_3:57666585-57666604 None:intergenic 50.0%
CATCACCCCATTTGCCTCAA+AGG - chr7_3:57666583-57666602 Msa1111910:CDS 50.0%
!! TTGGAAGTGGTGGTAGTGGT+AGG - chr7_3:57666637-57666656 Msa1111910:CDS 50.0%
GGTGGAAGTGAAAATTGGGG+TGG - chr7_3:57666678-57666697 Msa1111910:CDS 50.0%
TCTCACTTGGGCTGCTCATA+TGG - chr7_3:57667223-57667242 Msa1111910:CDS 50.0%
CTCACTTGGGCTGCTCATAT+GGG - chr7_3:57667224-57667243 Msa1111910:CDS 50.0%
!! AGTCATCGGTGTTGGTGCTT+AGG - chr7_3:57667327-57667346 Msa1111910:CDS 50.0%
!! GTCATCGGTGTTGGTGCTTA+GGG - chr7_3:57667328-57667347 Msa1111910:CDS 50.0%
!!! GTGGTTTTGGCAAGGTTGAC+AGG - chr7_3:57667383-57667402 Msa1111910:CDS 50.0%
TTGACAGGGTCACAGAGTTC+TGG - chr7_3:57667398-57667417 Msa1111910:CDS 50.0%
GAAGGTTGAAAGGGAAAGGG+AGG - chr7_3:57667457-57667476 Msa1111910:CDS 50.0%
! GAGAGAAGAGAGTGAGTTGG+TGG + chr7_3:57665987-57666006 None:intergenic 50.0%
AAGCAACGCCGTCATGTATG+CGG - chr7_3:57666195-57666214 Msa1111910:three_prime_UTR 50.0%
!! CTTTGAGGCAAATGGGGTGA+TGG + chr7_3:57666585-57666604 None:intergenic 50.0%
CATCACCCCATTTGCCTCAA+AGG - chr7_3:57666583-57666602 Msa1111910:CDS 50.0%
!! TTGGAAGTGGTGGTAGTGGT+AGG - chr7_3:57666637-57666656 Msa1111910:CDS 50.0%
GGTGGAAGTGAAAATTGGGG+TGG - chr7_3:57666678-57666697 Msa1111910:CDS 50.0%
TCTCACTTGGGCTGCTCATA+TGG - chr7_3:57667223-57667242 Msa1111910:CDS 50.0%
CTCACTTGGGCTGCTCATAT+GGG - chr7_3:57667224-57667243 Msa1111910:CDS 50.0%
!! AGTCATCGGTGTTGGTGCTT+AGG - chr7_3:57667327-57667346 Msa1111910:CDS 50.0%
!! GTCATCGGTGTTGGTGCTTA+GGG - chr7_3:57667328-57667347 Msa1111910:CDS 50.0%
!!! GTGGTTTTGGCAAGGTTGAC+AGG - chr7_3:57667383-57667402 Msa1111910:CDS 50.0%
TTGACAGGGTCACAGAGTTC+TGG - chr7_3:57667398-57667417 Msa1111910:CDS 50.0%
GAAGGTTGAAAGGGAAAGGG+AGG - chr7_3:57667457-57667476 Msa1111910:CDS 50.0%
ATCTGGTGTGAGAGAGCGGA+AGG + chr7_3:57666077-57666096 None:intergenic 55.0%
CTGGATCTGGTGTGAGAGAG+CGG + chr7_3:57666081-57666100 None:intergenic 55.0%
! GCACGGCTTTGACCAGATGA+AGG + chr7_3:57666489-57666508 None:intergenic 55.0%
!! AGGCAAATGGGGTGATGGGT+TGG + chr7_3:57666580-57666599 None:intergenic 55.0%
! TTCGTCGGAGGTGATGGTGT+TGG - chr7_3:57666618-57666637 Msa1111910:CDS 55.0%
! GGAGGTGATGGTGTTGGAAG+TGG - chr7_3:57666624-57666643 Msa1111910:CDS 55.0%
! GGTGATGGTGTTGGAAGTGG+TGG - chr7_3:57666627-57666646 Msa1111910:CDS 55.0%
! GGTGTTGGAAGTGGTGGTAG+TGG - chr7_3:57666633-57666652 Msa1111910:CDS 55.0%
!! AGTGGTGGTAGTGGTAGGAG+TGG - chr7_3:57666642-57666661 Msa1111910:CDS 55.0%
GGTTGAAAGGGAAAGGGAGG+AGG - chr7_3:57667460-57667479 Msa1111910:CDS 55.0%
AAGGGAAAGGGAGGAGGCTT+TGG - chr7_3:57667466-57667485 Msa1111910:intron 55.0%
ATCTGGTGTGAGAGAGCGGA+AGG + chr7_3:57666077-57666096 None:intergenic 55.0%
CTGGATCTGGTGTGAGAGAG+CGG + chr7_3:57666081-57666100 None:intergenic 55.0%
! GCACGGCTTTGACCAGATGA+AGG + chr7_3:57666489-57666508 None:intergenic 55.0%
!! AGGCAAATGGGGTGATGGGT+TGG + chr7_3:57666580-57666599 None:intergenic 55.0%
! TTCGTCGGAGGTGATGGTGT+TGG - chr7_3:57666618-57666637 Msa1111910:CDS 55.0%
! GGAGGTGATGGTGTTGGAAG+TGG - chr7_3:57666624-57666643 Msa1111910:CDS 55.0%
! GGTGATGGTGTTGGAAGTGG+TGG - chr7_3:57666627-57666646 Msa1111910:CDS 55.0%
! GGTGTTGGAAGTGGTGGTAG+TGG - chr7_3:57666633-57666652 Msa1111910:CDS 55.0%
!! AGTGGTGGTAGTGGTAGGAG+TGG - chr7_3:57666642-57666661 Msa1111910:CDS 55.0%
GGTTGAAAGGGAAAGGGAGG+AGG - chr7_3:57667460-57667479 Msa1111910:CDS 55.0%
AAGGGAAAGGGAGGAGGCTT+TGG - chr7_3:57667466-57667485 Msa1111910:intron 55.0%
CGCTCTCTCACACCAGATCC+AGG - chr7_3:57666079-57666098 Msa1111910:three_prime_UTR 60.0%
CAACGCCGTCATGTATGCGG+CGG - chr7_3:57666198-57666217 Msa1111910:three_prime_UTR 60.0%
!! GGTGGTAGTGGTAGGAGTGG+TGG - chr7_3:57666645-57666664 Msa1111910:CDS 60.0%
! GGTAGTGGTAGGAGTGGTGG+AGG - chr7_3:57666648-57666667 Msa1111910:CDS 60.0%
! AGTGGTAGGAGTGGTGGAGG+TGG - chr7_3:57666651-57666670 Msa1111910:CDS 60.0%
!! GCTGCTGTTGGGTTTGGTGC+TGG - chr7_3:57667098-57667117 Msa1111910:CDS 60.0%
!! GGGTTTGGTGCTGGTCTTGC+TGG - chr7_3:57667107-57667126 Msa1111910:CDS 60.0%
CGCTCTCTCACACCAGATCC+AGG - chr7_3:57666079-57666098 Msa1111910:three_prime_UTR 60.0%
CAACGCCGTCATGTATGCGG+CGG - chr7_3:57666198-57666217 Msa1111910:three_prime_UTR 60.0%
!! GGTGGTAGTGGTAGGAGTGG+TGG - chr7_3:57666645-57666664 Msa1111910:CDS 60.0%
! GGTAGTGGTAGGAGTGGTGG+AGG - chr7_3:57666648-57666667 Msa1111910:CDS 60.0%
! AGTGGTAGGAGTGGTGGAGG+TGG - chr7_3:57666651-57666670 Msa1111910:CDS 60.0%
!! GCTGCTGTTGGGTTTGGTGC+TGG - chr7_3:57667098-57667117 Msa1111910:CDS 60.0%
!! GGGTTTGGTGCTGGTCTTGC+TGG - chr7_3:57667107-57667126 Msa1111910:CDS 60.0%
!! CGGCGCCGGTACGTGAATCA+CGG - chr7_3:57666218-57666237 Msa1111910:three_prime_UTR 65.0%
! GGTAGGAGTGGTGGAGGTGG+TGG - chr7_3:57666654-57666673 Msa1111910:CDS 65.0%
! AGGAGTGGTGGAGGTGGTGG+TGG - chr7_3:57666657-57666676 Msa1111910:CDS 65.0%
!! AGTGGTGGAGGTGGTGGTGG+TGG - chr7_3:57666660-57666679 Msa1111910:CDS 65.0%
!! CGGCGCCGGTACGTGAATCA+CGG - chr7_3:57666218-57666237 Msa1111910:three_prime_UTR 65.0%
! GGTAGGAGTGGTGGAGGTGG+TGG - chr7_3:57666654-57666673 Msa1111910:CDS 65.0%
! AGGAGTGGTGGAGGTGGTGG+TGG - chr7_3:57666657-57666676 Msa1111910:CDS 65.0%
!! AGTGGTGGAGGTGGTGGTGG+TGG - chr7_3:57666660-57666679 Msa1111910:CDS 65.0%
CGGCGCCGCCGCATACATGA+CGG + chr7_3:57666206-57666225 None:intergenic 70.0%
CGTCATGTATGCGGCGGCGC+CGG - chr7_3:57666204-57666223 Msa1111910:three_prime_UTR 70.0%
CGGCGCCGCCGCATACATGA+CGG + chr7_3:57666206-57666225 None:intergenic 70.0%
CGTCATGTATGCGGCGGCGC+CGG - chr7_3:57666204-57666223 Msa1111910:three_prime_UTR 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 57665952 57667979 57665952 ID=Msa1111910;Name=Msa1111910
chr7_3 mRNA 57665952 57667979 57665952 ID=Msa1111910-mRNA-1;Parent=Msa1111910;Name=Msa1111910-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0.5|0.5|0|0.5|2|459|357
chr7_3 exon 57665952 57667480 57665952 ID=Msa1111910-mRNA-1:exon:12553;Parent=Msa1111910-mRNA-1
chr7_3 exon 57667976 57667979 57667976 ID=Msa1111910-mRNA-1:exon:12552;Parent=Msa1111910-mRNA-1
chr7_3 CDS 57667976 57667979 57667976 ID=Msa1111910-mRNA-1:cds;Parent=Msa1111910-mRNA-1
chr7_3 CDS 57666411 57667480 57666411 ID=Msa1111910-mRNA-1:cds;Parent=Msa1111910-mRNA-1
chr7_3 three_prime_UTR 57665952 57666410 57665952 ID=Msa1111910-mRNA-1:three_prime_utr;Parent=Msa1111910-mRNA-1
Gene Sequence

>Msa1111910

ATGAATCAAATGTCAACTATGGCTCTTCTGCGTTTTACACCTTCATCTGGTCAAAGCCGTGCACTTTCATTTCCATCATCATTACCATCACCACCTCCACAGTTAAATAACCGTACTTCTATATATCTCACCAACCCATCACCCCATTTGCCTCAAAGGTTGAAAATTTCATTCGTCGGAGGTGATGGTGTTGGAAGTGGTGGTAGTGGTAGGAGTGGTGGAGGTGGTGGTGGTGGAAGTGAAAATTGGGGTGGTGCTAATAATGATAATGATGATGGAAAATCAAAAGATTCGTCTTTTGGGATTTTGGGTCTGTTTCTGAATGGATGGAGATCAAGGGTTGCTGCTGATCCACAGTTTCCTTTCAAGGTTTTGATGGAAGAGTTGGTTGGTGTTACTGCTTGTGTCTTAGGTGATATGGCTTCAAGGCCTAATTTTGGTTTGAATGAACTTGATTTTGTGTTTTCAACTCTTGTTGTTGGTGCTATTCTCAATTTCACACTTATGTATCTATTGGCACCAACATTAGGAGCTTCTTCTGCTAGTGTGCCTGCAATCTTTGCATCTTGTCCTAAGAGTCACATGTTTGAGCCTGGTGCTTTTAGTTTATTGGATAGGTTAGGTACTTTGGTGTATAAAGGTACCATTTTTGCTGCTGTTGGGTTTGGTGCTGGTCTTGCTGGTACAGCACTTTCAAATGGGTTGATTAAGATGAGGAAGAAAATGGATCCAAACTTTGAGACACCAAACAAAGCTCCACCTACTTTACTCAATTCTCTCACTTGGGCTGCTCATATGGGTTTCAGCAGTAATCTTAGGTACCAAACACTAAATGGTGCTGAGTTTGTGTTGGAGAAAGCGCTTAATCCTTTAGCATTCAAGTCATCGGTGTTGGTGCTTAGGGTTGTGAACAATGTTCTTGGAGGAATGTCTTTTGTGGTTTTGGCAAGGTTGACAGGGTCACAGAGTTCTGGTGAGAAGCCATCACAATTGGAGGATGGATTAGTTGAGAAGGTTGAAAGGGAAAGGGAGGAGGCTTTGGAGAATAACAACCAAACAACATCAACAAAGTGA

Protein sequence

>Msa1111910

MNQMSTMALLRFTPSSGQSRALSFPSSLPSPPPQLNNRTSIYLTNPSPHLPQRLKISFVGGDGVGSGGSGRSGGGGGGGSENWGGANNDNDDGKSKDSSFGILGLFLNGWRSRVAADPQFPFKVLMEELVGVTACVLGDMASRPNFGLNELDFVFSTLVVGAILNFTLMYLLAPTLGASSASVPAIFASCPKSHMFEPGAFSLLDRLGTLVYKGTIFAAVGFGAGLAGTALSNGLIKMRKKMDPNFETPNKAPPTLLNSLTWAAHMGFSSNLRYQTLNGAEFVLEKALNPLAFKSSVLVLRVVNNVLGGMSFVVLARLTGSQSSGEKPSQLEDGLVEKVEREREEALENNNQTTSTK*