AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1437590


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437590 MtrunA17_Chr3g0138671 97.792 634 4 1 1 634 1 624 0.0 1277
Msa1437590 MtrunA17_Chr4g0063141 50.203 492 237 4 20 509 23 508 1.91e-165 496
Msa1437590 MtrunA17_Chr8g0356081 41.282 671 331 10 23 634 20 686 5.82e-162 480
Msa1437590 MtrunA17_Chr2g0277651 45.437 504 266 5 17 519 39 534 4.07e-145 441
Msa1437590 MtrunA17_Chr1g0148981 42.442 516 233 6 39 496 48 557 5.57e-131 409
Msa1437590 MtrunA17_Chr3g0138131 49.081 381 185 4 40 417 59 433 8.31e-121 367
Msa1437590 MtrunA17_Chr2g0286031 50.538 372 172 2 131 502 21 380 1.44e-116 363
Msa1437590 MtrunA17_Chr5g0434371 36.152 473 283 9 40 502 78 541 8.39e-91 299
Msa1437590 MtrunA17_Chr4g0063071 28.846 260 172 4 269 519 5 260 3.92e-29 116
Msa1437590 MtrunA17_Chr2g0286041 46.903 113 59 1 13 125 21 132 1.94e-27 107
Msa1437590 MtrunA17_Chr4g0062561 27.650 217 149 3 79 295 4 212 9.01e-19 90.9
Msa1437590 MtrunA17_Chr4g0062571 28.571 217 142 4 79 295 4 207 1.65e-18 85.1
Msa1437590 MtrunA17_Chr4g0001481 25.123 203 149 2 243 442 380 582 2.39e-16 83.2
Msa1437590 MtrunA17_Chr4g0073941 21.996 491 292 15 39 442 91 577 2.57e-16 82.8
Msa1437590 MtrunA17_Chr4g0063081 31.694 183 115 4 56 234 3 179 7.66e-15 73.6
Msa1437590 MtrunA17_Chr8g0347121 23.153 203 153 2 243 442 337 539 6.39e-14 75.1
Msa1437590 MtrunA17_Chr1g0158861 21.145 454 280 14 92 472 143 591 7.77e-14 75.1
Msa1437590 MtrunA17_Chr1g0181121 22.831 219 165 3 241 455 314 532 2.92e-13 73.2
Msa1437590 MtrunA17_Chr4g0028861 22.120 217 165 3 243 455 396 612 2.66e-12 70.1
Msa1437590 MtrunA17_Chr7g0275581 25.980 204 146 3 243 442 358 560 5.15e-12 68.9
Msa1437590 MtrunA17_Chr3g0125651 22.167 203 155 2 243 442 315 517 9.53e-12 68.2
Msa1437590 MtrunA17_Chr3g0126541 22.059 204 154 3 243 442 353 555 1.07e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437590 AT4G32650.3 59.048 630 243 7 8 633 42 660 0.0 704
Msa1437590 AT4G32650.1 58.216 639 235 8 8 633 42 661 0.0 703
Msa1437590 AT4G32650.2 59.567 554 212 4 8 551 42 593 0.0 642
Msa1437590 AT5G46240.1 42.057 661 330 8 15 632 23 673 3.56e-166 491
Msa1437590 AT2G26650.1 44.580 572 276 8 20 559 26 588 1.22e-161 485
Msa1437590 AT4G18290.1 49.068 483 242 3 21 503 29 507 6.46e-150 450
Msa1437590 AT4G18290.2 49.068 483 242 3 21 503 40 518 8.57e-150 450
Msa1437590 AT4G32500.1 45.674 497 260 4 20 511 43 534 1.03e-146 447
Msa1437590 AT2G25600.1 45.766 496 259 5 20 511 47 536 5.57e-145 443
Msa1437590 AT4G22200.2 45.248 484 260 5 17 498 39 519 1.35e-135 410
Msa1437590 AT4G22200.1 45.436 482 258 5 17 496 39 517 1.72e-133 410
Msa1437590 AT2G26650.2 44.444 486 231 7 101 584 1 449 1.43e-131 404
Msa1437590 AT3G02850.3 35.667 457 277 7 44 491 74 522 1.27e-92 298
Msa1437590 AT3G02850.2 35.667 457 277 7 44 491 74 522 1.60e-91 299
Msa1437590 AT3G02850.1 35.667 457 277 7 44 491 74 522 5.49e-91 300
Msa1437590 AT5G37500.4 35.730 459 278 7 42 491 55 505 1.19e-88 291
Msa1437590 AT5G37500.1 35.730 459 278 7 42 491 55 505 4.95e-88 291
Msa1437590 AT5G37500.2 35.730 459 278 7 42 491 55 505 8.69e-88 291
Msa1437590 AT5G37500.3 35.477 451 274 7 50 491 9 451 7.26e-85 282
Msa1437590 AT1G19780.2 24.390 205 152 2 241 442 164 368 2.39e-15 79.7
Msa1437590 AT1G19780.1 24.390 205 152 2 241 442 375 579 4.04e-15 79.7
Msa1437590 AT1G15990.1 23.902 205 153 2 241 442 369 573 9.88e-15 78.2
Msa1437590 AT5G57940.3 23.645 203 152 2 243 442 360 562 1.03e-13 75.1
Msa1437590 AT5G57940.1 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa1437590 AT5G57940.2 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa1437590 AT2G46430.1 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa1437590 AT2G46430.2 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa1437590 AT4G30560.5 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa1437590 AT4G30560.2 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa1437590 AT4G30560.3 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa1437590 AT4G30560.1 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa1437590 AT4G30560.4 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa1437590 AT2G23980.6 22.439 205 156 2 241 442 354 558 5.94e-12 69.3
Msa1437590 AT2G23980.9 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1437590 AT2G23980.10 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1437590 AT2G23980.1 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1437590 AT2G23980.4 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1437590 AT2G23980.5 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1437590 AT2G23980.3 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1437590 AT2G23980.2 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1437590 AT2G23980.8 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1437590 AT2G23980.7 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1437590 AT5G53130.1 21.296 216 162 3 230 442 347 557 3.59e-11 67.0
Msa1437590 AT1G01340.1 23.039 204 152 3 243 442 337 539 7.05e-11 65.9
Msa1437590 AT1G01340.2 23.267 202 150 3 245 442 344 544 7.65e-11 65.9

Find 138 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGCATATTTCTACATTT+TGG 0.153780 tig0028331:-6253 Msa1437590:CDS
CTTCCCAATCCACGTGTTTC+CGG 0.184950 tig0028331:+8079 None:intergenic
GCCTTCCCATCTTCATTAAA+TGG 0.195859 tig0028331:+5348 Msa1437580:intron
ATAACTCATCGTCCTCTCTT+AGG 0.208567 tig0028331:+2757 Msa1437580:intron
AGATTGTAATTGTCTCTATT+TGG 0.212418 tig0028331:+2715 Msa1437580:intron
CTTCTACTTCTCACTGTATA+AGG 0.266754 tig0028331:+5423 Msa1437580:intron
CCCAACGAAAACATTGAAAA+TGG 0.273238 tig0028331:-3176 Msa1437590:CDS
CTGTATGCAGAGAACAAGTT+TGG 0.290869 tig0028331:-2837 Msa1437590:intron
CAGTTTATGAAGGGCCTAAA+AGG 0.301144 tig0028331:-5019 Msa1437590:CDS
ATTTGGTCCTTCAAACCTTC+TGG 0.317911 tig0028331:+6592 None:intergenic
GACATTCTTTGTGGCTTACT+TGG 0.330293 tig0028331:-9480 Msa1437590:CDS
TTCCCAATCCACGTGTTTCC+GGG 0.336300 tig0028331:+8080 None:intergenic
GTACCTATATCTGCGATCAT+AGG 0.339717 tig0028331:+9732 None:intergenic
TTAAGGTTACCTTCTTCATA+TGG 0.341526 tig0028331:+4057 Msa1437580:intron
CACGACAGAGGGGAAGTCTT+TGG 0.343113 tig0028331:-8535 Msa1437590:CDS
GGAAGCATGGTAGGAGAAAT+AGG 0.351752 tig0028331:-5468 Msa1437590:CDS
AACAGAATTTCTGAGTGATT+TGG 0.351877 tig0028331:-4969 Msa1437590:CDS
ATTTCTCCTACCATGCTTCC+AGG 0.352995 tig0028331:+5471 Msa1437580:intron
CCGTACAATCCACAGGATTA+AGG 0.353518 tig0028331:+4040 Msa1437580:intron
GGGCCTAAAAGGCGGGGTGC+TGG 0.361204 tig0028331:-5008 Msa1437590:CDS
CATAATCCTGACATTCTTTG+TGG 0.363443 tig0028331:-9489 Msa1437590:CDS
ACCTGATAGCAATCTTCTTA+TGG 0.365107 tig0028331:+9429 None:intergenic
AAAAGATCTTCGACTGAATC+TGG 0.370035 tig0028331:+3128 Msa1437580:intron
GCTTTCAGAGAGATGTCAAT+TGG 0.377539 tig0028331:-9560 Msa1437590:CDS
GACGTTCAAGTGGCGAAATA+AGG 0.388506 tig0028331:-9846 Msa1437590:CDS
ATACCGGCTCTAATTGCTTT+AGG 0.395979 tig0028331:+6502 None:intergenic
GTGAAACCATTTAATGAAGA+TGG 0.396083 tig0028331:-5354 Msa1437590:CDS
AAGAGGAAGCAAAATTCTTA+TGG 0.402959 tig0028331:-2811 Msa1437590:CDS
CTTCTCACTGTATAAGGTTG+TGG 0.405620 tig0028331:+5429 Msa1437580:intron
TTTGGTCCTTCAAACCTTCT+GGG 0.406751 tig0028331:+6593 None:intergenic
GGCCTCACTGCATATATTAT+CGG 0.406985 tig0028331:-7900 Msa1437590:CDS
TTTAAAGAATGGGTCTGAAC+AGG 0.414172 tig0028331:-6115 Msa1437590:intron
AGTTGGTATATCTGCTGAAA+TGG 0.417497 tig0028331:+8574 None:intergenic
CACCCGGAAACACGTGGATT+GGG 0.429696 tig0028331:-8082 Msa1437590:CDS
AGGTCGAAGTAACCTTCATC+AGG 0.430867 tig0028331:+9775 None:intergenic
TCACCCGGAAACACGTGGAT+TGG 0.431953 tig0028331:-8083 Msa1437590:CDS
TAACTCATCGTCCTCTCTTA+GGG 0.435806 tig0028331:+2758 Msa1437580:intron
AAACACGTGGATTGGGAAGC+AGG 0.440143 tig0028331:-8075 Msa1437590:CDS
CTCCCTATGATCGCAGATAT+AGG 0.444080 tig0028331:-9735 Msa1437590:intron
GCTGTGTATGTGCCAACATT+TGG 0.448804 tig0028331:+6575 None:intergenic
TTATTCTACTCAGTTTATGA+AGG 0.454225 tig0028331:-5029 Msa1437590:intron
TATCGGAAACATGACAAATC+TGG 0.454837 tig0028331:-7883 Msa1437590:CDS
GATGATCGATTCGTATAAGC+TGG 0.455732 tig0028331:+5394 Msa1437580:intron
ACCATAAGAAGATTGCTATC+AGG 0.463306 tig0028331:-9430 Msa1437590:intron
CTCCATAGCCAACAGTGGTA+AGG 0.464281 tig0028331:+7985 None:intergenic
GAAAAGATGCTGAGCAATAC+CGG 0.467875 tig0028331:+6486 None:intergenic
TTATGAAGGGCCTAAAAGGC+GGG 0.476754 tig0028331:-5015 Msa1437590:CDS
TTCTGAACATGCTTAGACTC+TGG 0.476763 tig0028331:-8510 Msa1437590:CDS
TACCTATATCTGCGATCATA+GGG 0.482588 tig0028331:+9733 None:intergenic
TTCTCACTGTATAAGGTTGT+GGG 0.485398 tig0028331:+5430 Msa1437580:intron
TTTGGCACTAATCCTGATGA+AGG 0.487192 tig0028331:-9787 Msa1437590:CDS
CTATTTGCAGTGCATTTCAC+AGG 0.490090 tig0028331:-8140 Msa1437590:CDS
CTTTCAGAGAGATGTCAATT+GGG 0.493184 tig0028331:-9559 Msa1437590:CDS
TCATCATCATTTCAAGCAGC+TGG 0.493382 tig0028331:-5376 Msa1437590:CDS
ATTGTAACCCTTACCACTGT+TGG 0.494420 tig0028331:-7993 Msa1437590:CDS
ACCAAAATGTAGAAATATGC+CGG 0.496163 tig0028331:+6252 None:intergenic
TGCTTAGACTCTGGCGATTG+AGG 0.497213 tig0028331:-8501 Msa1437590:CDS
CGGCTCTAATTGCTTTAGGC+AGG 0.497294 tig0028331:+6506 None:intergenic
ACCCTTACCACTGTTGGCTA+TGG 0.497731 tig0028331:-7987 Msa1437590:CDS
AGTAAGCCACAAAGAATGTC+AGG 0.501626 tig0028331:+9483 None:intergenic
AGCAAAATTCTTATGGCTGA+TGG 0.505553 tig0028331:-2804 Msa1437590:CDS
GATTATGTCAAATGCAAAGA+AGG 0.505830 tig0028331:+9505 None:intergenic
CAAACATTTATTCTTCCCCA+TGG 0.507553 tig0028331:-8614 Msa1437590:CDS
AAGCATAGGAGTGTCGGATC+GGG 0.514286 tig0028331:-8041 Msa1437590:CDS
ACAGGCTAGAGAAAGACATC+AGG 0.515409 tig0028331:-8318 Msa1437590:intron
ACAGCAAGAAGAAGTGCTAC+AGG 0.515890 tig0028331:-6530 Msa1437590:CDS
TGGACTCCCAGAAGGTTTGA+AGG 0.517610 tig0028331:-6599 Msa1437590:CDS
CCTTAATCCTGTGGATTGTA+CGG 0.517898 tig0028331:-4040 Msa1437590:CDS
AAATTTATTTAAAGGAGTCT+CGG 0.522060 tig0028331:-6443 Msa1437590:CDS
TAAAAGACTGCTAGAAATTG+AGG 0.525967 tig0028331:+9816 None:intergenic
CTAGATCCTGGAAGCATGGT+AGG 0.533447 tig0028331:-5477 Msa1437590:CDS
GAAGAAAATCCATATGAAGA+AGG 0.533805 tig0028331:-4066 Msa1437590:CDS
GCAAACGTTCCTAGTGGTAT+TGG 0.536240 tig0028331:-9618 Msa1437590:CDS
TGAAACCATTTAATGAAGAT+GGG 0.540227 tig0028331:-5353 Msa1437590:CDS
CAGATATACCAACTTATAGC+AGG 0.540823 tig0028331:-8565 Msa1437590:CDS
CATCTTGCAAAATGAGATGC+CGG 0.542003 tig0028331:-6271 Msa1437590:CDS
AAGATGATGTCAACCTTTGA+CGG 0.542979 tig0028331:+6288 None:intergenic
GTGGATTGGGAAGCAGGTAG+AGG 0.543328 tig0028331:-8069 Msa1437590:CDS
ACCATTTAATGAAGATGGGA+AGG 0.544586 tig0028331:-5349 Msa1437590:CDS
TCCATAGCCAACAGTGGTAA+GGG 0.545277 tig0028331:+7986 None:intergenic
AACGTTCCTAGTGGTATTGG+TGG 0.546659 tig0028331:-9615 Msa1437590:CDS
GACTAGGCTTGACAGTGGAC+TGG 0.551907 tig0028331:+3229 Msa1437580:intron
TATTCTACTCAGTTTATGAA+GGG 0.552678 tig0028331:-5028 Msa1437590:intron
CTCAGAAATTCTGTTACATA+CGG 0.553507 tig0028331:+4977 Msa1437580:intron
TGTTTCCGGGTGATTTGTGA+TGG 0.553957 tig0028331:+8093 None:intergenic
CAGGCAAATCACACGACAGA+GGG 0.557635 tig0028331:-8546 Msa1437590:CDS
TAAGCATAGGAGTGTCGGAT+CGG 0.559099 tig0028331:-8042 Msa1437590:CDS
TCAGGATTAGTGCCAAATGC+TGG 0.561152 tig0028331:+9793 None:intergenic
AGAGTGGAAGCTAGATCCAT+GGG 0.562419 tig0028331:+8598 None:intergenic
TCTGGTAGGATAATGAGCTT+TGG 0.563514 tig0028331:+3146 Msa1437580:intron
GCAGCATCCGACACAAAATG+AGG 0.564454 tig0028331:-4118 Msa1437590:intron
TCTCTGAAAGCTAACTCGAA+TGG 0.564788 tig0028331:+9572 None:intergenic
TATTGGTGGTGTACTCAGCA+TGG 0.565665 tig0028331:-9601 Msa1437590:CDS
AAGTGGCGAAATAAGGAACT+TGG 0.565700 tig0028331:-9839 Msa1437590:CDS
ACCACGAACCTGAGTAAAGT+TGG 0.575334 tig0028331:+5317 Msa1437580:intron
GTTACACTTACTCCATGTAC+TGG 0.577805 tig0028331:-8019 Msa1437590:CDS
AATTATCACCAACTTTACTC+AGG 0.579672 tig0028331:-5325 Msa1437590:intron
GAACGTCTTCTAACTAGAGA+TGG 0.581226 tig0028331:+9862 None:intergenic
CAGAGTGGAAGCTAGATCCA+TGG 0.582011 tig0028331:+8597 None:intergenic
AGATGATGTCAACCTTTGAC+GGG 0.585146 tig0028331:+6289 None:intergenic
TCTTCTTATGGTCATCAACA+AGG 0.589359 tig0028331:+9441 None:intergenic
CAAACTAGATCCTGGAAGCA+TGG 0.592017 tig0028331:-5481 Msa1437590:CDS
ATTGGTGGTGTACTCAGCAT+GGG 0.592623 tig0028331:-9600 Msa1437590:CDS
AGATCTATGCGCCCTAAGAG+AGG 0.595067 tig0028331:-2769 Msa1437590:CDS
CTGCCTAAAGCAATTAGAGC+CGG 0.596573 tig0028331:-6505 Msa1437590:CDS
GATCTTCGACTGAATCTGGT+AGG 0.597089 tig0028331:+3132 Msa1437580:intron
ATGATCGATTCGTATAAGCT+GGG 0.597906 tig0028331:+5395 Msa1437580:intron
GCTTTCCATCACAAATCACC+CGG 0.601397 tig0028331:-8098 Msa1437590:CDS
CTCTGTCAGAACCTTTGCCA+TGG 0.604556 tig0028331:-7850 Msa1437590:intron
TTTCGTTGGGGTGATGTCCG+TGG 0.604677 tig0028331:+3189 Msa1437580:intron
TTTATGAAGGGCCTAAAAGG+CGG 0.604730 tig0028331:-5016 Msa1437590:CDS
TGCAGAAAATACAACGGAGA+AGG 0.604909 tig0028331:-7955 Msa1437590:CDS
AGCAGAATACTACCCGTCAA+AGG 0.606939 tig0028331:-6301 Msa1437590:CDS
AGGTTTGAAGGACCAAATGT+TGG 0.607435 tig0028331:-6587 Msa1437590:CDS
GTGATTTGCCTGCTATAAGT+TGG 0.611642 tig0028331:+8557 None:intergenic
TTACTGACCGTACAATCCAC+AGG 0.616689 tig0028331:+4033 Msa1437580:intron
AACAAGATCAGCAATCAACA+TGG 0.622158 tig0028331:+9535 None:intergenic
CTAGTTAGAAGACGTTCAAG+TGG 0.624136 tig0028331:-9856 Msa1437590:CDS
GGTTACAATAGACCAGTACA+TGG 0.630208 tig0028331:+8007 None:intergenic
AGAAGGTAACCTTAATCCTG+TGG 0.632695 tig0028331:-4049 Msa1437590:CDS
CGGAAACATGACAAATCTGG+TGG 0.634913 tig0028331:-7880 Msa1437590:CDS
GTGTTAGTGAGCTCTTCTCA+AGG 0.639360 tig0028331:-8477 Msa1437590:intron
TCTGAGTGATTTGGAAGACG+AGG 0.639686 tig0028331:-4960 Msa1437590:intron
CAGCATCCGACACAAAATGA+GGG 0.640928 tig0028331:-4117 Msa1437590:CDS
CCGATTAGAGTCAAAATCCA+CGG 0.641853 tig0028331:-3206 Msa1437590:CDS
TATGAAGGGCCTAAAAGGCG+GGG 0.644259 tig0028331:-5014 Msa1437590:CDS
ACAAATCACCCGGAAACACG+TGG 0.645837 tig0028331:-8088 Msa1437590:CDS
AGTACACCACCAATACCACT+AGG 0.675337 tig0028331:+9609 None:intergenic
CAGGCTAGAGAAAGACATCA+GGG 0.679388 tig0028331:-8317 Msa1437590:CDS
GCAGGCAAATCACACGACAG+AGG 0.680984 tig0028331:-8547 Msa1437590:CDS
TAAATCTCCATAGCCAACAG+TGG 0.683311 tig0028331:+7980 None:intergenic
TTTACATGCAGAAAATACAA+CGG 0.691098 tig0028331:-7961 Msa1437590:CDS
TATCTGCTGAAATGGCAGAG+TGG 0.713852 tig0028331:+8582 None:intergenic
ATTGTGGCAAACGTTCCTAG+TGG 0.719275 tig0028331:-9624 Msa1437590:CDS
ATCGGGACTAGGCTTGACAG+TGG 0.726298 tig0028331:+3224 Msa1437580:intron
AGGCAAATCACACGACAGAG+GGG 0.735317 tig0028331:-8545 Msa1437590:CDS
TTCCGATAATATATGCAGTG+AGG 0.738037 tig0028331:+7898 None:intergenic
GAGTGGAAGCTAGATCCATG+GGG 0.775567 tig0028331:+8599 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAATAATTGTATTA+AGG + tig0028331:2869-2888 Msa1437580:intron 10.0%
!!! ATCAATAGTATTAAAATTTT+CGG + tig0028331:3336-3355 Msa1437580:intron 10.0%
!! GAAAAAACAAATTTATTTAA+AGG - tig0028331:6108-6127 Msa1437590:intron 10.0%
!!! AAACAGATTTATTTTAATTT+TGG - tig0028331:8361-8380 Msa1437590:intron 10.0%
!!! GAAAATTTTAATACTATTGA+TGG - tig0028331:3335-3354 Msa1437590:intron 15.0%
!! AAAAAAAAAAAAACTACCAA+GGG + tig0028331:3384-3403 Msa1437580:intron 15.0%
!! AAAAAAAAAAAAAACTACCA+AGG + tig0028331:3385-3404 Msa1437580:intron 15.0%
!!! AGTATATATTTCATAGTTTT+TGG + tig0028331:3872-3891 Msa1437580:intron 15.0%
!! AAACTTAAATTCATTTCTTT+AGG - tig0028331:4122-4141 Msa1437590:intron 15.0%
!!! AATTTTTTGAAGATTTTTCA+TGG - tig0028331:4734-4753 Msa1437590:intron 15.0%
!!! CGTTTTTAATATAAGAAATA+AGG + tig0028331:5258-5277 Msa1437580:intron 15.0%
!! GCATATAATTATAAGTATTT+CGG + tig0028331:5892-5911 Msa1437580:three_prime_UTR 15.0%
!!! ATATTGTAATATTTTGTTGA+AGG + tig0028331:5929-5948 Msa1437580:three_prime_UTR 15.0%
!! TTATTATAATTTCTGAACTA+TGG - tig0028331:6676-6695 Msa1437590:intron 15.0%
!! AAATACTTTGTATAAAACAT+TGG + tig0028331:6989-7008 None:intergenic 15.0%
!! AACATTAATATAGAAAGATA+TGG + tig0028331:7501-7520 None:intergenic 15.0%
!! AATAGAATATATAAGTATCA+TGG - tig0028331:8119-8138 Msa1437590:CDS 15.0%
!!! AAAAAATTAAAGACGTTTTA+CGG - tig0028331:8295-8314 Msa1437590:CDS 15.0%
!! TTAAACAAAAAGTTATTAAG+TGG + tig0028331:8784-8803 None:intergenic 15.0%
!!! TTTTTGTGCATTTATATATT+AGG + tig0028331:9284-9303 None:intergenic 15.0%
!! ATTAAAATGAAATCAAAGAA+GGG + tig0028331:9609-9628 None:intergenic 15.0%
!! AATTAAAATGAAATCAAAGA+AGG + tig0028331:9610-9629 None:intergenic 15.0%
!!! GAGCAATAACATATTTTTTT+AGG + tig0028331:2807-2826 Msa1437580:intron 20.0%
!! TTATCTATACCAATATACAA+AGG - tig0028331:3435-3454 Msa1437590:intron 20.0%
!! TATCTATACCAATATACAAA+GGG - tig0028331:3436-3455 Msa1437590:intron 20.0%
!!! TACTTTCAGTTTTGTTTAAT+TGG - tig0028331:3817-3836 Msa1437590:intron 20.0%
!!! GATTATTGAGTTTTCATAAT+AGG - tig0028331:3917-3936 Msa1437590:intron 20.0%
!!! ATTTCTTTAGGATATTTTTG+TGG - tig0028331:4134-4153 Msa1437590:intron 20.0%
!!! TTTCTTTAGGATATTTTTGT+GGG - tig0028331:4135-4154 Msa1437590:intron 20.0%
!!! ATTTGATGGTATATCTTATT+TGG + tig0028331:4341-4360 Msa1437580:intron 20.0%
!!! TTTTATATGCTGTTTAACAT+CGG - tig0028331:4638-4657 Msa1437590:intron 20.0%
!! AATCTTCAAAAAATTTACCA+TGG + tig0028331:4729-4748 Msa1437580:intron 20.0%
!! AAATCTAATCTACTTTAATC+TGG - tig0028331:4964-4983 Msa1437590:CDS 20.0%
!! AAAAACTTAAAGTTAGGAAA+TGG + tig0028331:5160-5179 Msa1437580:intron 20.0%
!! TAGCATAAAAACTTAAAGTT+AGG + tig0028331:5166-5185 Msa1437580:intron 20.0%
!! AAAGTTATGAAAGAATTTCA+CGG + tig0028331:5413-5432 Msa1437580:intron 20.0%
!! TTTGAGTAAAAAGAAAACTT+AGG + tig0028331:5452-5471 Msa1437580:intron 20.0%
!! AATAACTTCGATATTTCAAT+TGG + tig0028331:5523-5542 Msa1437580:intron 20.0%
!! TAGGGAAATAAAAATGTAAA+GGG - tig0028331:5725-5744 Msa1437590:intron 20.0%
!! AAATTAAGCAAATCTACTAT+TGG + tig0028331:5775-5794 Msa1437580:three_prime_UTR 20.0%
!! AAATTTATTTAAAGGAGTCT+CGG - tig0028331:6116-6135 Msa1437590:CDS 20.0%
!!! ATGTGTTGATTTTAAAGAAT+GGG - tig0028331:6434-6453 Msa1437590:CDS 20.0%
!! CTTGTATATTTAGAAATTTC+AGG + tig0028331:7385-7404 None:intergenic 20.0%
!! CTGAAATTTCTAAATATACA+AGG - tig0028331:7383-7402 Msa1437590:intron 20.0%
!!! TATTGGTGATTGAAATTTAA+AGG + tig0028331:7635-7654 None:intergenic 20.0%
!! ATTGTATATAAGTTTGTCTA+AGG + tig0028331:7807-7826 None:intergenic 20.0%
!! AATACATATATTAACATCTC+AGG - tig0028331:8088-8107 Msa1437590:CDS 20.0%
!! ATACATATATTAACATCTCA+GGG - tig0028331:8089-8108 Msa1437590:CDS 20.0%
!! AATCATGTGATATTACTAAA+TGG - tig0028331:8830-8849 Msa1437590:intron 20.0%
!! ATTTATATATTAGGTAAGCA+GGG + tig0028331:9275-9294 None:intergenic 20.0%
!!! GTATTGAACATATTAATTTG+TGG - tig0028331:9696-9715 Msa1437590:intron 20.0%
! CAAGTTTATGATATAGATTG+TGG - tig0028331:2919-2938 Msa1437590:intron 25.0%
! ATCTATACCAATATACAAAG+GGG - tig0028331:3437-3456 Msa1437590:intron 25.0%
! GTACAAAATATTGAAGTGAA+GGG + tig0028331:3606-3625 Msa1437580:intron 25.0%
! TTTAATCAAGTATTCGTTGT+TGG - tig0028331:3693-3712 Msa1437590:intron 25.0%
!! AGTTTGTATGTCTTCATTTT+TGG - tig0028331:3717-3736 Msa1437590:intron 25.0%
!!! TATTTGGTGTCAAGATAAAA+GGG + tig0028331:3762-3781 Msa1437580:intron 25.0%
! ACAAAACTGAAAGTAAATCT+AGG + tig0028331:3812-3831 Msa1437580:intron 25.0%
! CAATAATCATGAGAAAATAG+AGG + tig0028331:3905-3924 Msa1437580:intron 25.0%
! ACCATCAAATTGTCTAATTT+AGG - tig0028331:4351-4370 Msa1437590:intron 25.0%
! ACCTAAATTAGACAATTTGA+TGG + tig0028331:4355-4374 Msa1437580:intron 25.0%
! TTTACATGCAGAAAATACAA+CGG - tig0028331:4598-4617 Msa1437590:intron 25.0%
!!! ATTTTTGAGATACTTACAGT+GGG + tig0028331:4914-4933 Msa1437580:intron 25.0%
!!! TATTTTTGAGATACTTACAG+TGG + tig0028331:4915-4934 Msa1437580:intron 25.0%
!!! TAGTTTGTTAGTTTGTTTTC+CGG + tig0028331:5013-5032 Msa1437580:intron 25.0%
!! TTCTAGTATATTTGTTGCAA+TGG + tig0028331:5038-5057 Msa1437580:intron 25.0%
! ATACTACAAAGGAGTAAAAA+AGG - tig0028331:5084-5103 Msa1437590:intron 25.0%
! TACTACAAAGGAGTAAAAAA+GGG - tig0028331:5085-5104 Msa1437590:intron 25.0%
! TTCTTATATTAAAAACGCCA+AGG - tig0028331:5261-5280 Msa1437590:intron 25.0%
!! TTTCAATTGGTGAATTTTGA+GGG + tig0028331:5510-5529 Msa1437580:intron 25.0%
!! ATTTCAATTGGTGAATTTTG+AGG + tig0028331:5511-5530 Msa1437580:intron 25.0%
! GTAGGGAAATAAAAATGTAA+AGG - tig0028331:5724-5743 Msa1437590:intron 25.0%
!! AAAAATGTAAAGGGTTTTTC+AGG - tig0028331:5734-5753 Msa1437590:intron 25.0%
! TATAATTATATGCTTCACAG+AGG - tig0028331:5899-5918 Msa1437590:intron 25.0%
! ATAATTATATGCTTCACAGA+GGG - tig0028331:5900-5919 Msa1437590:intron 25.0%
!! AAAAAGAAGTTTTACCATCT+GGG + tig0028331:6154-6173 None:intergenic 25.0%
!! AAAAAAGAAGTTTTACCATC+TGG + tig0028331:6155-6174 None:intergenic 25.0%
!!! TATTTCTACATTTTGGTATC+TGG - tig0028331:6313-6332 Msa1437590:CDS 25.0%
!!! GATGTGTTGATTTTAAAGAA+TGG - tig0028331:6433-6452 Msa1437590:CDS 25.0%
!!! AATATGTTTTGAAGTTATGC+AGG + tig0028331:6724-6743 None:intergenic 25.0%
! ATCTTAATCAGACAAGTAAA+TGG - tig0028331:6888-6907 Msa1437590:intron 25.0%
! TGAAACCATTTAATGAAGAT+GGG - tig0028331:7206-7225 Msa1437590:intron 25.0%
! AGAAATTTCAGGAAAAATGT+GGG + tig0028331:7374-7393 None:intergenic 25.0%
! TAGAAATTTCAGGAAAAATG+TGG + tig0028331:7375-7394 None:intergenic 25.0%
! TTATTCTACTCAGTTTATGA+AGG - tig0028331:7530-7549 Msa1437590:intron 25.0%
! TATTCTACTCAGTTTATGAA+GGG - tig0028331:7531-7550 Msa1437590:intron 25.0%
! GTGATTGAAATTTAAAGGAA+AGG + tig0028331:7630-7649 None:intergenic 25.0%
!!! ACAAAAATTTTAGTAAGGCT+CGG - tig0028331:7707-7726 Msa1437590:intron 25.0%
! AAAAGATGCTAAAAAATCCA+TGG - tig0028331:7752-7771 Msa1437590:intron 25.0%
!! TTATTCTTTTATCCTTCACT+TGG + tig0028331:7943-7962 None:intergenic 25.0%
!!! TAAAGTCTTTATTTTCTGGA+GGG + tig0028331:8331-8350 None:intergenic 25.0%
!!! ATAAAGTCTTTATTTTCTGG+AGG + tig0028331:8332-8351 None:intergenic 25.0%
! TCCAGAAAATAAAGACTTTA+TGG - tig0028331:8331-8350 Msa1437590:intron 25.0%
! ATTTATGAGCATGATTATGA+GGG - tig0028331:8649-8668 Msa1437590:intron 25.0%
!! TAAAAGTTGTTGTAAGTTGA+CGG + tig0028331:8742-8761 None:intergenic 25.0%
! ATGACAGTAATATATTGCTA+TGG - tig0028331:9107-9126 Msa1437590:intron 25.0%
! AAACTGAAGAAAAAAAACCT+AGG + tig0028331:9141-9160 None:intergenic 25.0%
! CATTTATATATTAGGTAAGC+AGG + tig0028331:9276-9295 None:intergenic 25.0%
! TAATCCAAAGATAGAAATAG+AGG - tig0028331:9561-9580 Msa1437590:CDS 25.0%
! AATCCAAAGATAGAAATAGA+GGG - tig0028331:9562-9581 Msa1437590:CDS 25.0%
!!! TTTTTATTATGAAGCACTGT+GGG + tig0028331:9636-9655 None:intergenic 25.0%
!!! ATTTTTATTATGAAGCACTG+TGG + tig0028331:9637-9656 None:intergenic 25.0%
! AGATTGTAATTGTCTCTATT+TGG + tig0028331:9847-9866 None:intergenic 25.0%
TAAAAGACTGCTAGAAATTG+AGG + tig0028331:2746-2765 Msa1437580:intron 30.0%
GATTATGTCAAATGCAAAGA+AGG + tig0028331:3057-3076 Msa1437580:intron 30.0%
! TTTTGACAAAATGTTACCCT+TGG - tig0028331:3406-3425 Msa1437590:intron 30.0%
GTATAGATAACAACTACCAA+GGG + tig0028331:3425-3444 Msa1437580:intron 30.0%
!!! ACTTTTGGGTTGGATTTTTT+CGG - tig0028331:3469-3488 Msa1437590:intron 30.0%
CAATATTGCTTCTATTGTTG+TGG + tig0028331:3504-3523 Msa1437580:intron 30.0%
CACAACAATAGAAGCAATAT+TGG - tig0028331:3502-3521 Msa1437590:intron 30.0%
GGTACAAAATATTGAAGTGA+AGG + tig0028331:3607-3626 Msa1437580:intron 30.0%
! TTGTACCATTTTATCGTTCA+TGG - tig0028331:3620-3639 Msa1437590:intron 30.0%
ATTGTCCATGAACGATAAAA+TGG + tig0028331:3628-3647 Msa1437580:intron 30.0%
TCGTTCATGGACAATAAAAA+TGG - tig0028331:3633-3652 Msa1437590:intron 30.0%
!! ATTTGGTGTCAAGATAAAAG+GGG + tig0028331:3761-3780 Msa1437580:intron 30.0%
!! CTATTTGGTGTCAAGATAAA+AGG + tig0028331:3763-3782 Msa1437580:intron 30.0%
AAGACAGTGAAGTAACTATT+TGG + tig0028331:3778-3797 Msa1437580:intron 30.0%
TTGTTTAATTGGACAAGCAA+TGG - tig0028331:3828-3847 Msa1437590:intron 30.0%
GTTTAGGTACAAGTTACAAA+TGG + tig0028331:4207-4226 Msa1437580:intron 30.0%
!! ATTTTGAGCTTCACTTTTGT+TGG - tig0028331:4380-4399 Msa1437590:intron 30.0%
!!! CACTTTTGTTGGTTTATCAT+AGG - tig0028331:4391-4410 Msa1437590:intron 30.0%
CAAAAAATTTACCATGGCAA+AGG + tig0028331:4723-4742 Msa1437580:intron 30.0%
!!! ATAGTTTTATGTCTTCCTAG+TGG - tig0028331:4805-4824 Msa1437590:intron 30.0%
TAAAGGAAGAAAACACAGTA+AGG - tig0028331:4832-4851 Msa1437590:intron 30.0%
CTAATCTACTTTAATCTGGT+TGG - tig0028331:4968-4987 Msa1437590:CDS 30.0%
!! TACTTTAATCTGGTTGGTAA+GGG - tig0028331:4974-4993 Msa1437590:CDS 30.0%
CTAGAAACTTAAGACTTGAT+TGG - tig0028331:5052-5071 Msa1437590:intron 30.0%
GGTTATAAGTGATACTACAA+AGG - tig0028331:5073-5092 Msa1437590:intron 30.0%
ACTACAAAGGAGTAAAAAAG+GGG - tig0028331:5086-5105 Msa1437590:intron 30.0%
TGAAAGTTGACTAGGATATA+GGG + tig0028331:5300-5319 Msa1437580:intron 30.0%
CTGCATTCAAATCTCTATTA+TGG - tig0028331:5326-5345 Msa1437590:CDS 30.0%
TTTGAAGAGAGAATTCTGTT+GGG + tig0028331:5559-5578 Msa1437580:intron 30.0%
TACTCTATTAACATATTCGG+AGG + tig0028331:5707-5726 Msa1437580:intron 30.0%
TCCGAATATGTTAATAGAGT+AGG - tig0028331:5706-5725 Msa1437590:intron 30.0%
CCCTACTCTATTAACATATT+CGG + tig0028331:5710-5729 Msa1437580:intron 30.0%
CCGAATATGTTAATAGAGTA+GGG - tig0028331:5707-5726 Msa1437590:intron 30.0%
TTACAATATGCGAGCAAAAA+TGG - tig0028331:5940-5959 Msa1437590:intron 30.0%
!!! TTGTTTTTTCAACTACGTTG+TGG + tig0028331:6098-6117 Msa1437580:three_prime_UTR 30.0%
ACCAAAATGTAGAAATATGC+CGG + tig0028331:6310-6329 None:intergenic 30.0%
! TCTGAAATCAATTGTCTGTT+TGG + tig0028331:6481-6500 None:intergenic 30.0%
TTAGTATCTGTTGTCTAAGT+GGG + tig0028331:6617-6636 None:intergenic 30.0%
TTTAGTATCTGTTGTCTAAG+TGG + tig0028331:6618-6637 None:intergenic 30.0%
AATTTCTGAACTATGGAGAT+CGG - tig0028331:6683-6702 Msa1437590:intron 30.0%
! TTTTTGTTCAAACTAGATCC+TGG - tig0028331:7070-7089 Msa1437590:intron 30.0%
GTGAAACCATTTAATGAAGA+TGG - tig0028331:7205-7224 Msa1437590:intron 30.0%
AATTATCACCAACTTTACTC+AGG - tig0028331:7234-7253 Msa1437590:intron 30.0%
CAAATGTGTATTTGTGTTTG+TGG + tig0028331:7294-7313 None:intergenic 30.0%
GAAATTTCAGGAAAAATGTG+GGG + tig0028331:7373-7392 None:intergenic 30.0%
!!! TCATATTTTTGAGGTCTTTG+TGG + tig0028331:7442-7461 None:intergenic 30.0%
!! GGAATTTGGTCATATTTTTG+AGG + tig0028331:7451-7470 None:intergenic 30.0%
AAGTTTGTATGAAGGGAATT+TGG + tig0028331:7465-7484 None:intergenic 30.0%
TATAGAAAGATATGGACTTG+TGG + tig0028331:7493-7512 None:intergenic 30.0%
CTCAGAAATTCTGTTACATA+CGG + tig0028331:7585-7604 None:intergenic 30.0%
AACAGAATTTCTGAGTGATT+TGG - tig0028331:7590-7609 Msa1437590:intron 30.0%
!!! TTTTTTGCCAAGAAGAGTAT+TGG + tig0028331:7652-7671 None:intergenic 30.0%
!! GGAGCACAAAAATTTTAGTA+AGG - tig0028331:7702-7721 Msa1437590:intron 30.0%
TATGCGATGTTTAATATCCA+TGG + tig0028331:7772-7791 None:intergenic 30.0%
! TTTGTCTAAGGTTTAGCTAT+GGG + tig0028331:7795-7814 None:intergenic 30.0%
ACAATTAGTACTTTAGTGTG+TGG - tig0028331:7822-7841 Msa1437590:intron 30.0%
CAATTAGTACTTTAGTGTGT+GGG - tig0028331:7823-7842 Msa1437590:intron 30.0%
! CAGGAATAACTTTTTACTTC+TGG + tig0028331:7862-7881 None:intergenic 30.0%
! AAAACATGGTTTAAAGCTGA+TGG + tig0028331:7908-7927 None:intergenic 30.0%
!!! TTAAACCATGTTTTGAGGAA+AGG - tig0028331:7914-7933 Msa1437590:CDS 30.0%
!!! TAAACCATGTTTTGAGGAAA+GGG - tig0028331:7915-7934 Msa1437590:CDS 30.0%
TAACAATGTGTGTGTATACA+TGG - tig0028331:8169-8188 Msa1437590:intron 30.0%
!!! GCGTAACATTTTTTTCTTTC+TGG + tig0028331:8268-8287 None:intergenic 30.0%
! AAATTAAAGACGTTTTACGG+TGG - tig0028331:8298-8317 Msa1437590:CDS 30.0%
!!! GCCATAAAGTCTTTATTTTC+TGG + tig0028331:8335-8354 None:intergenic 30.0%
AAATAAAGACTTTATGGCAC+AGG - tig0028331:8337-8356 Msa1437590:intron 30.0%
TTTGTACAGATGTAAATGTG+TGG + tig0028331:8387-8406 None:intergenic 30.0%
! CTTCATATGGATTTTCTTCA+TGG + tig0028331:8492-8511 None:intergenic 30.0%
GAAGAAAATCCATATGAAGA+AGG - tig0028331:8493-8512 Msa1437590:CDS 30.0%
TTAAGGTTACCTTCTTCATA+TGG + tig0028331:8505-8524 None:intergenic 30.0%
GATGATAACACTAAATGAGT+GGG - tig0028331:8551-8570 Msa1437590:CDS 30.0%
TCATGCTCATAAATCTTTCT+GGG + tig0028331:8643-8662 None:intergenic 30.0%
ATCATGCTCATAAATCTTTC+TGG + tig0028331:8644-8663 None:intergenic 30.0%
GATTTATGAGCATGATTATG+AGG - tig0028331:8648-8667 Msa1437590:intron 30.0%
! AATTTGAGATTGCCATTCAA+AGG - tig0028331:8700-8719 Msa1437590:intron 30.0%
GGATATAATCAAATGGTACT+AGG + tig0028331:8877-8896 None:intergenic 30.0%
TTGGTAGGGATATAATCAAA+TGG + tig0028331:8884-8903 None:intergenic 30.0%
TTAACACTAACACTTACACT+TGG + tig0028331:8903-8922 None:intergenic 30.0%
AGTAATATATTGCTATGGCA+AGG - tig0028331:9112-9131 Msa1437590:intron 30.0%
ATGCACAAAAAAATTAACGC+AGG - tig0028331:9293-9312 Msa1437590:intron 30.0%
! CATTTTCAATGTTTTCGTTG+GGG + tig0028331:9385-9404 None:intergenic 30.0%
! CCATTTTCAATGTTTTCGTT+GGG + tig0028331:9386-9405 None:intergenic 30.0%
! TCCATTTTCAATGTTTTCGT+TGG + tig0028331:9387-9406 None:intergenic 30.0%
! GAAACTACTCAGAATCTTTT+GGG + tig0028331:9508-9527 None:intergenic 30.0%
! TGAAACTACTCAGAATCTTT+TGG + tig0028331:9509-9528 None:intergenic 30.0%
AAAGATTCTGAGTAGTTTCA+CGG - tig0028331:9509-9528 Msa1437590:CDS 30.0%
ATCCAAAGATAGAAATAGAG+GGG - tig0028331:9563-9582 Msa1437590:CDS 30.0%
AAGAGGAAGCAAAATTCTTA+TGG - tig0028331:9748-9767 Msa1437590:CDS 30.0%
TACCTATATCTGCGATCATA+GGG + tig0028331:2829-2848 Msa1437580:intron 35.0%
CTTTCAGAGAGATGTCAATT+GGG - tig0028331:3000-3019 Msa1437590:intron 35.0%
AACAAGATCAGCAATCAACA+TGG + tig0028331:3027-3046 Msa1437580:intron 35.0%
CATAATCCTGACATTCTTTG+TGG - tig0028331:3070-3089 Msa1437590:intron 35.0%
TCTTCTTATGGTCATCAACA+AGG + tig0028331:3121-3140 Msa1437580:intron 35.0%
ACCATAAGAAGATTGCTATC+AGG - tig0028331:3129-3148 Msa1437590:CDS 35.0%
ACCTGATAGCAATCTTCTTA+TGG + tig0028331:3133-3152 Msa1437580:intron 35.0%
CCATACTTTCTACATCAACA+CGG - tig0028331:3162-3181 Msa1437590:CDS 35.0%
TTAGTCTCAACGATTCCAAA+GGG + tig0028331:3278-3297 Msa1437580:intron 35.0%
! ATTAGTCTCAACGATTCCAA+AGG + tig0028331:3279-3298 Msa1437580:intron 35.0%
! GTTGAGACTAATCATTGACT+CGG - tig0028331:3287-3306 Msa1437590:intron 35.0%
GGTATAGATAACAACTACCA+AGG + tig0028331:3426-3445 Msa1437580:intron 35.0%
GATGAATCCCCTTTGTATAT+TGG + tig0028331:3447-3466 Msa1437580:intron 35.0%
! AAGGGGATTCATCAAACTTT+TGG - tig0028331:3454-3473 Msa1437590:intron 35.0%
! AGGGGATTCATCAAACTTTT+GGG - tig0028331:3455-3474 Msa1437590:intron 35.0%
!! GATTCATCAAACTTTTGGGT+TGG - tig0028331:3459-3478 Msa1437590:intron 35.0%
!! TTTGGTGTCAAGATAAAAGG+GGG + tig0028331:3760-3779 Msa1437580:intron 35.0%
CAAACATTTATTCTTCCCCA+TGG - tig0028331:3945-3964 Msa1437590:intron 35.0%
! AGTTGGTATATCTGCTGAAA+TGG + tig0028331:3988-4007 Msa1437580:intron 35.0%
CAGATATACCAACTTATAGC+AGG - tig0028331:3994-4013 Msa1437590:intron 35.0%
! AGGTAGAGGATTTTAAGCAT+AGG - tig0028331:4504-4523 Msa1437590:intron 35.0%
!! GATTTTAAGCATAGGAGTGT+CGG - tig0028331:4512-4531 Msa1437590:intron 35.0%
TTCCGATAATATATGCAGTG+AGG + tig0028331:4664-4683 Msa1437580:intron 35.0%
TATCGGAAACATGACAAATC+TGG - tig0028331:4676-4695 Msa1437590:intron 35.0%
AGAATGCAATGCTAAGTCAA+GGG + tig0028331:4768-4787 Msa1437580:intron 35.0%
TAGAATGCAATGCTAAGTCA+AGG + tig0028331:4769-4788 Msa1437580:intron 35.0%
! TTCTTCCTTTAACTTCCACT+AGG + tig0028331:4823-4842 Msa1437580:intron 35.0%
! CTACTTTAATCTGGTTGGTA+AGG - tig0028331:4973-4992 Msa1437590:CDS 35.0%
TAAGGGAACGAATTAACATC+CGG - tig0028331:4991-5010 Msa1437590:CDS 35.0%
ATATAGTATTTACCACCTCC+AGG - tig0028331:5132-5151 Msa1437590:intron 35.0%
TGCTATTAAGTTTGTCAAGC+AGG - tig0028331:5181-5200 Msa1437590:intron 35.0%
GCTATTAAGTTTGTCAAGCA+GGG - tig0028331:5182-5201 Msa1437590:intron 35.0%
CTGAAAGTTGACTAGGATAT+AGG + tig0028331:5301-5320 Msa1437580:intron 35.0%
AGTTAAGCTGAAAGTTGACT+AGG + tig0028331:5308-5327 Msa1437580:intron 35.0%
TTGAAGAGAGAATTCTGTTG+GGG + tig0028331:5558-5577 Msa1437580:intron 35.0%
GTTTGAAGAGAGAATTCTGT+TGG + tig0028331:5560-5579 Msa1437580:intron 35.0%
! GGATGATTTTATATCCCAGA+TGG - tig0028331:6137-6156 Msa1437590:intron 35.0%
AAGATGATGTCAACCTTTGA+CGG + tig0028331:6274-6293 None:intergenic 35.0%
TACAGTTCATACTCTAGTAC+TGG - tig0028331:6368-6387 Msa1437590:intron 35.0%
TTTAAAGAATGGGTCTGAAC+AGG - tig0028331:6444-6463 Msa1437590:CDS 35.0%
AAACATATTGCATCAACCTG+AGG - tig0028331:6735-6754 Msa1437590:intron 35.0%
GTCTGATTAAGATGTTCTCT+AGG + tig0028331:6881-6900 None:intergenic 35.0%
AGACAAGTAAATGGAACAGA+AGG - tig0028331:6897-6916 Msa1437590:intron 35.0%
! ACTAGGAACAAGACATTTTG+AGG - tig0028331:6941-6960 Msa1437590:intron 35.0%
! CTAGGAACAAGACATTTTGA+GGG - tig0028331:6942-6961 Msa1437590:intron 35.0%
TATTTGTGCCTCTTAGCTAA+TGG - tig0028331:7004-7023 Msa1437590:intron 35.0%
TATGAGCTTAGCAATGCAAT+GGG + tig0028331:7037-7056 None:intergenic 35.0%
TTATGAGCTTAGCAATGCAA+TGG + tig0028331:7038-7057 None:intergenic 35.0%
TTCTCACTGTATAAGGTTGT+GGG + tig0028331:7132-7151 None:intergenic 35.0%
CTTCTACTTCTCACTGTATA+AGG + tig0028331:7139-7158 None:intergenic 35.0%
!! ATGATCGATTCGTATAAGCT+GGG + tig0028331:7167-7186 None:intergenic 35.0%
ACCATTTAATGAAGATGGGA+AGG - tig0028331:7210-7229 Msa1437590:intron 35.0%
GGACATGAAGTTTGTATGAA+GGG + tig0028331:7472-7491 None:intergenic 35.0%
TGGACATGAAGTTTGTATGA+AGG + tig0028331:7473-7492 None:intergenic 35.0%
TCAATCACCAATACTCTTCT+TGG - tig0028331:7642-7661 Msa1437590:intron 35.0%
! GTTTGTCTAAGGTTTAGCTA+TGG + tig0028331:7796-7815 None:intergenic 35.0%
!!! CCAAGATCTTTTGGAATTTC+AGG + tig0028331:7881-7900 None:intergenic 35.0%
CCTGAAATTCCAAAAGATCT+TGG - tig0028331:7878-7897 Msa1437590:CDS 35.0%
! GATGGATAACCAAGATCTTT+TGG + tig0028331:7890-7909 None:intergenic 35.0%
!!! CAGCTTTAAACCATGTTTTG+AGG - tig0028331:7909-7928 Msa1437590:CDS 35.0%
!!! AAACCATGTTTTGAGGAAAG+GGG - tig0028331:7916-7935 Msa1437590:CDS 35.0%
ATTCTTTCGTTCAAAGGAAG+TGG + tig0028331:8061-8080 None:intergenic 35.0%
TTCACGATTCTTTCGTTCAA+AGG + tig0028331:8067-8086 None:intergenic 35.0%
ATGTAAACCATTGCGAGAAT+TGG + tig0028331:8146-8165 None:intergenic 35.0%
GGATGATAACACTAAATGAG+TGG - tig0028331:8550-8569 Msa1437590:CDS 35.0%
AAGAACCAGTTGACATTCAA+GGG - tig0028331:8600-8619 Msa1437590:CDS 35.0%
ACATGATTACACGATCAGAT+TGG + tig0028331:8818-8837 None:intergenic 35.0%
ACTAACACTTACACTTGGTA+GGG + tig0028331:8898-8917 None:intergenic 35.0%
AAGATATGTCATATGTCACG+TGG - tig0028331:8922-8941 Msa1437590:intron 35.0%
AGATATGTCATATGTCACGT+GGG - tig0028331:8923-8942 Msa1437590:intron 35.0%
!!! GCTGCTTTTTTGAATAAACC+AGG + tig0028331:8995-9014 None:intergenic 35.0%
AACTAAGATTGCAATCAAGC+TGG + tig0028331:9068-9087 None:intergenic 35.0%
! TTACTGTCATCTAGAGTTTG+AGG + tig0028331:9097-9116 None:intergenic 35.0%
! CATATCAAGTTGTGACACTA+CGG + tig0028331:9174-9193 None:intergenic 35.0%
AGGGAAATATTAGGTAAGCA+GGG + tig0028331:9256-9275 None:intergenic 35.0%
TAGGTAAGCAGGGAAATATT+AGG + tig0028331:9265-9284 None:intergenic 35.0%
CCCAACGAAAACATTGAAAA+TGG - tig0028331:9383-9402 Msa1437590:intron 35.0%
AAAAGATCTTCGACTGAATC+TGG + tig0028331:9434-9453 None:intergenic 35.0%
TCCAAAGATAGAAATAGAGG+GGG - tig0028331:9564-9583 Msa1437590:CDS 35.0%
GAGAACAAGTTTGGAAAAAG+AGG - tig0028331:9731-9750 Msa1437590:intron 35.0%
AGCAAAATTCTTATGGCTGA+TGG - tig0028331:9755-9774 Msa1437590:CDS 35.0%
GAACGTCTTCTAACTAGAGA+TGG + tig0028331:2700-2719 Msa1437580:intron 40.0%
CTAGTTAGAAGACGTTCAAG+TGG - tig0028331:2703-2722 Msa1437590:three_prime_UTR 40.0%
AAGTGGCGAAATAAGGAACT+TGG - tig0028331:2720-2739 Msa1437590:three_prime_UTR 40.0%
! AGCAGTCTTTTACCAGCATT+TGG - tig0028331:2754-2773 Msa1437590:CDS 40.0%
TTTGGCACTAATCCTGATGA+AGG - tig0028331:2772-2791 Msa1437590:CDS 40.0%
GTACCTATATCTGCGATCAT+AGG + tig0028331:2830-2849 Msa1437580:intron 40.0%
! TCTCTGAAAGCTAACTCGAA+TGG + tig0028331:2990-3009 Msa1437580:intron 40.0%
GCTTTCAGAGAGATGTCAAT+TGG - tig0028331:2999-3018 Msa1437590:intron 40.0%
AGTAAGCCACAAAGAATGTC+AGG + tig0028331:3079-3098 Msa1437580:intron 40.0%
GACATTCTTTGTGGCTTACT+TGG - tig0028331:3079-3098 Msa1437590:intron 40.0%
! CCGTGTTGATGTAGAAAGTA+TGG + tig0028331:3165-3184 Msa1437580:intron 40.0%
AATGACAACCCACCGTAATT+AGG - tig0028331:3204-3223 Msa1437590:CDS 40.0%
ATGACAACCCACCGTAATTA+GGG - tig0028331:3205-3224 Msa1437590:CDS 40.0%
GGATCAAAAGGCCCTAATTA+CGG + tig0028331:3219-3238 Msa1437580:intron 40.0%
!! ACTAATCATTGACTCGGCAA+TGG - tig0028331:3293-3312 Msa1437590:intron 40.0%
!! CTAATCATTGACTCGGCAAT+GGG - tig0028331:3294-3313 Msa1437590:intron 40.0%
! CATAGTTGATGTGTTACCCT+TGG - tig0028331:3365-3384 Msa1437590:intron 40.0%
TATGACTACTCGCGTAAAGA+CGG + tig0028331:3662-3681 Msa1437580:intron 40.0%
AGCAATGGCTGAACAATTCA+AGG - tig0028331:3843-3862 Msa1437590:intron 40.0%
! GTGATTTGCCTGCTATAAGT+TGG + tig0028331:4005-4024 Msa1437580:intron 40.0%
TTCTGAACATGCTTAGACTC+TGG - tig0028331:4049-4068 Msa1437590:CDS 40.0%
GTAAGACAGTTAGCAGGTTT+AGG + tig0028331:4223-4242 Msa1437580:intron 40.0%
AAACCTGCTAACTGTCTTAC+AGG - tig0028331:4223-4242 Msa1437590:intron 40.0%
CTATTTGCAGTGCATTTCAC+AGG - tig0028331:4419-4438 Msa1437590:intron 40.0%
GTTACACTTACTCCATGTAC+TGG - tig0028331:4540-4559 Msa1437590:intron 40.0%
GGTTACAATAGACCAGTACA+TGG + tig0028331:4555-4574 Msa1437580:intron 40.0%
ATTGTAACCCTTACCACTGT+TGG - tig0028331:4566-4585 Msa1437590:intron 40.0%
TAAATCTCCATAGCCAACAG+TGG + tig0028331:4582-4601 Msa1437580:intron 40.0%
TGCAGAAAATACAACGGAGA+AGG - tig0028331:4604-4623 Msa1437590:intron 40.0%
GGCCTCACTGCATATATTAT+CGG - tig0028331:4659-4678 Msa1437590:intron 40.0%
GTCTTCCTAGTGGAAGTTAA+AGG - tig0028331:4815-4834 Msa1437590:intron 40.0%
TACTTACAGTGGGAGAATGT+CGG + tig0028331:4904-4923 Msa1437580:intron 40.0%
GGGAAAGAAGATGTAGATCT+AGG - tig0028331:5106-5125 Msa1437590:intron 40.0%
TAAAGTTAGGAAATGGAGCC+TGG + tig0028331:5153-5172 Msa1437580:intron 40.0%
! TAAGGTCTAAGAAGCATGTC+TGG + tig0028331:5240-5259 Msa1437580:intron 40.0%
AGGGATATTTGCTCAAACCT+TGG + tig0028331:5281-5300 Msa1437580:intron 40.0%
TTTGGTCCTTCAAACCTTCT+GGG + tig0028331:5969-5988 Msa1437580:three_prime_UTR 40.0%
ATTTGGTCCTTCAAACCTTC+TGG + tig0028331:5970-5989 Msa1437580:three_prime_UTR 40.0%
AGGTTTGAAGGACCAAATGT+TGG - tig0028331:5972-5991 Msa1437590:intron 40.0%
!! ATACCGGCTCTAATTGCTTT+AGG + tig0028331:6060-6079 Msa1437580:three_prime_UTR 40.0%
GAAAAGATGCTGAGCAATAC+CGG + tig0028331:6076-6095 Msa1437580:three_prime_UTR 40.0%
ATCTGATACCTGTGTAGTGA+TGG + tig0028331:6233-6252 None:intergenic 40.0%
AGATGATGTCAACCTTTGAC+GGG + tig0028331:6273-6292 None:intergenic 40.0%
CATCTTGCAAAATGAGATGC+CGG - tig0028331:6288-6307 Msa1437590:CDS 40.0%
!! GCCGGCATATTTCTACATTT+TGG - tig0028331:6306-6325 Msa1437590:CDS 40.0%
!! CATTTTGGTATCTGGATCAG+TGG - tig0028331:6321-6340 Msa1437590:intron 40.0%
ACTGAACCATTTCTAATCGC+AGG - tig0028331:6411-6430 Msa1437590:intron 40.0%
ACACATCCTGCGATTAGAAA+TGG + tig0028331:6420-6439 None:intergenic 40.0%
TTTGATGTGTTTGCTTCAGC+AGG + tig0028331:6834-6853 None:intergenic 40.0%
GCTAGGTAGTAAGAGATACT+AGG - tig0028331:6924-6943 Msa1437590:intron 40.0%
GAGAATTGCCATTAGCTAAG+AGG + tig0028331:7015-7034 None:intergenic 40.0%
CTTCTCACTGTATAAGGTTG+TGG + tig0028331:7133-7152 None:intergenic 40.0%
!! GATGATCGATTCGTATAAGC+TGG + tig0028331:7168-7187 None:intergenic 40.0%
TCATCATCATTTCAAGCAGC+TGG - tig0028331:7183-7202 Msa1437590:intron 40.0%
GCCTTCCCATCTTCATTAAA+TGG + tig0028331:7214-7233 None:intergenic 40.0%
CAGGAAAAATGTGGGGATTT+GGG + tig0028331:7366-7385 None:intergenic 40.0%
TCAGGAAAAATGTGGGGATT+TGG + tig0028331:7367-7386 None:intergenic 40.0%
! TTGTGGCTTGCAAGGATATT+TGG + tig0028331:7425-7444 None:intergenic 40.0%
CAGTTTATGAAGGGCCTAAA+AGG - tig0028331:7540-7559 Msa1437590:intron 40.0%
TTTATGAAGGGCCTAAAAGG+CGG - tig0028331:7543-7562 Msa1437590:intron 40.0%
AGTGTGTGGGAGAAAGATAA+CGG - tig0028331:7836-7855 Msa1437590:intron 40.0%
AATGTCCTGTTTGGGAGAAA+GGG + tig0028331:8012-8031 None:intergenic 40.0%
GTGACATGAATGTCCTGTTT+GGG + tig0028331:8020-8039 None:intergenic 40.0%
TCATGTCACCTAATGATGCA+TGG - tig0028331:8031-8050 Msa1437590:CDS 40.0%
GTGGTTATCCATGCATCATT+AGG + tig0028331:8042-8061 None:intergenic 40.0%
! TTTGTGCCCTCATTTTGTGT+CGG + tig0028331:8451-8470 None:intergenic 40.0%
AGAAGGTAACCTTAATCCTG+TGG - tig0028331:8510-8529 Msa1437590:CDS 40.0%
! CCTTAATCCTGTGGATTGTA+CGG - tig0028331:8519-8538 Msa1437590:CDS 40.0%
TGAGTGGGTAGATATTGTGT+AGG - tig0028331:8566-8585 Msa1437590:CDS 40.0%
CAAGAACCAGTTGACATTCA+AGG - tig0028331:8599-8618 Msa1437590:CDS 40.0%
TTCAAGGGTTCTGCTAAACA+CGG - tig0028331:8615-8634 Msa1437590:CDS 40.0%
ACACAAAGTCTGCCTTTGAA+TGG + tig0028331:8715-8734 None:intergenic 40.0%
CACTAACACTTACACTTGGT+AGG + tig0028331:8899-8918 None:intergenic 40.0%
GATATGTCATATGTCACGTG+GGG - tig0028331:8924-8943 Msa1437590:intron 40.0%
AAGATTGCCCCATGATAAAG+AGG - tig0028331:8957-8976 Msa1437590:intron 40.0%
TGTTGTGCCTCTTTATCATG+GGG + tig0028331:8967-8986 None:intergenic 40.0%
GTGTTGTGCCTCTTTATCAT+GGG + tig0028331:8968-8987 None:intergenic 40.0%
AGTGTTGTGCCTCTTTATCA+TGG + tig0028331:8969-8988 None:intergenic 40.0%
! TTTTAAGCATGAGCACAGCA+AGG + tig0028331:9021-9040 None:intergenic 40.0%
CGTAGTGTCACAACTTGATA+TGG - tig0028331:9172-9191 Msa1437590:intron 40.0%
CAGGGAAATATTAGGTAAGC+AGG + tig0028331:9257-9276 None:intergenic 40.0%
!! TTTTGACTCTAATCGGGACT+AGG + tig0028331:9349-9368 None:intergenic 40.0%
!!! CGTGGATTTTGACTCTAATC+GGG + tig0028331:9355-9374 None:intergenic 40.0%
!!! CCGTGGATTTTGACTCTAAT+CGG + tig0028331:9356-9375 None:intergenic 40.0%
CCGATTAGAGTCAAAATCCA+CGG - tig0028331:9353-9372 Msa1437590:intron 40.0%
TCTGGTAGGATAATGAGCTT+TGG + tig0028331:9416-9435 None:intergenic 40.0%
! GAAGATCTTTTCAGAGTAGC+AGG - tig0028331:9443-9462 Msa1437590:CDS 40.0%
! TCTTTTCAGAGTAGCAGGTA+TGG - tig0028331:9448-9467 Msa1437590:CDS 40.0%
! CTTTTCAGAGTAGCAGGTAT+GGG - tig0028331:9449-9468 Msa1437590:CDS 40.0%
CCAAAGATAGAAATAGAGGG+GGG - tig0028331:9565-9584 Msa1437590:CDS 40.0%
CAAAGATAGAAATAGAGGGG+GGG - tig0028331:9566-9585 Msa1437590:CDS 40.0%
AAAGATAGAAATAGAGGGGG+GGG - tig0028331:9567-9586 Msa1437590:CDS 40.0%
!! TTATTATGAAGCACTGTGGG+TGG + tig0028331:9633-9652 None:intergenic 40.0%
CTGTATGCAGAGAACAAGTT+TGG - tig0028331:9722-9741 Msa1437590:intron 40.0%
TAACTCATCGTCCTCTCTTA+GGG + tig0028331:9804-9823 None:intergenic 40.0%
ATAACTCATCGTCCTCTCTT+AGG + tig0028331:9805-9824 None:intergenic 40.0%
GACGTTCAAGTGGCGAAATA+AGG - tig0028331:2713-2732 Msa1437590:three_prime_UTR 45.0%
! TCAGGATTAGTGCCAAATGC+TGG + tig0028331:2769-2788 Msa1437580:intron 45.0%
AGGTCGAAGTAACCTTCATC+AGG + tig0028331:2787-2806 Msa1437580:intron 45.0%
CTCCCTATGATCGCAGATAT+AGG - tig0028331:2824-2843 Msa1437590:CDS 45.0%
TGTCATTACACAGACAGCAC+AGG + tig0028331:2901-2920 Msa1437580:intron 45.0%
ATTGTGGCAAACGTTCCTAG+TGG - tig0028331:2935-2954 Msa1437590:intron 45.0%
GCAAACGTTCCTAGTGGTAT+TGG - tig0028331:2941-2960 Msa1437590:intron 45.0%
! AACGTTCCTAGTGGTATTGG+TGG - tig0028331:2944-2963 Msa1437590:intron 45.0%
AGTACACCACCAATACCACT+AGG + tig0028331:2953-2972 Msa1437580:intron 45.0%
!! TATTGGTGGTGTACTCAGCA+TGG - tig0028331:2958-2977 Msa1437590:intron 45.0%
!! ATTGGTGGTGTACTCAGCAT+GGG - tig0028331:2959-2978 Msa1437590:intron 45.0%
CAAAAGGCCCTAATTACGGT+GGG + tig0028331:3215-3234 Msa1437580:intron 45.0%
TCAAAAGGCCCTAATTACGG+TGG + tig0028331:3216-3235 Msa1437580:intron 45.0%
ATACCTTGTGGCACCTAGTT+GGG + tig0028331:3240-3259 Msa1437580:intron 45.0%
AATACCTTGTGGCACCTAGT+TGG + tig0028331:3241-3260 Msa1437580:intron 45.0%
AAGCCATGGTCAATACCTTG+TGG + tig0028331:3252-3271 Msa1437580:intron 45.0%
ATTCCAAAGGGTCTAAGCCA+TGG + tig0028331:3266-3285 Msa1437580:intron 45.0%
AAAGGGGGCAGACAACAAAA+CGG + tig0028331:3745-3764 Msa1437580:intron 45.0%
AGAGTGGAAGCTAGATCCAT+GGG + tig0028331:3964-3983 Msa1437580:intron 45.0%
TATCTGCTGAAATGGCAGAG+TGG + tig0028331:3980-3999 Msa1437580:intron 45.0%
GTGTTAGTGAGCTCTTCTCA+AGG - tig0028331:4082-4101 Msa1437590:CDS 45.0%
ATGGCAGAACATGTGCGAAA+TGG + tig0028331:4188-4207 Msa1437580:intron 45.0%
TAGCCTGTAAGACAGTTAGC+AGG + tig0028331:4229-4248 Msa1437580:intron 45.0%
ACAGGCTAGAGAAAGACATC+AGG - tig0028331:4241-4260 Msa1437590:intron 45.0%
CAGGCTAGAGAAAGACATCA+GGG - tig0028331:4242-4261 Msa1437590:intron 45.0%
! TCACAGGCTGCGTGTATTTT+TGG - tig0028331:4435-4454 Msa1437590:intron 45.0%
!!! AGGCTGCGTGTATTTTTGGT+TGG - tig0028331:4439-4458 Msa1437590:intron 45.0%
GCTTTCCATCACAAATCACC+CGG - tig0028331:4461-4480 Msa1437590:intron 45.0%
! TGTTTCCGGGTGATTTGTGA+TGG + tig0028331:4469-4488 Msa1437580:intron 45.0%
!! TAAGCATAGGAGTGTCGGAT+CGG - tig0028331:4517-4536 Msa1437590:intron 45.0%
TCCATAGCCAACAGTGGTAA+GGG + tig0028331:4576-4595 Msa1437580:intron 45.0%
CGGAAACATGACAAATCTGG+TGG - tig0028331:4679-4698 Msa1437590:intron 45.0%
! AGCAAAAATGGACTCCCAGA+AGG - tig0028331:5952-5971 Msa1437590:intron 45.0%
GCTGTGTATGTGCCAACATT+TGG + tig0028331:5987-6006 Msa1437580:three_prime_UTR 45.0%
!! ACAGCAAGAAGAAGTGCTAC+AGG - tig0028331:6029-6048 Msa1437590:intron 45.0%
CTGCCTAAAGCAATTAGAGC+CGG - tig0028331:6054-6073 Msa1437590:intron 45.0%
CATGACATCCATCACTACAC+AGG - tig0028331:6222-6241 Msa1437590:intron 45.0%
AGCAGAATACTACCCGTCAA+AGG - tig0028331:6258-6277 Msa1437590:CDS 45.0%
ATGGGTCTGAACAGGTATGA+TGG - tig0028331:6452-6471 Msa1437590:CDS 45.0%
AACCTGAGGCAGAAGTCATT+TGG - tig0028331:6749-6768 Msa1437590:intron 45.0%
ACCTGAGGCAGAAGTCATTT+GGG - tig0028331:6750-6769 Msa1437590:intron 45.0%
TGCTCGTAAGTGCTTGAAGA+TGG + tig0028331:6810-6829 None:intergenic 45.0%
CAAACTAGATCCTGGAAGCA+TGG - tig0028331:7078-7097 Msa1437590:intron 45.0%
ATTTCTCCTACCATGCTTCC+AGG + tig0028331:7091-7110 None:intergenic 45.0%
! GGAAGCATGGTAGGAGAAAT+AGG - tig0028331:7091-7110 Msa1437590:intron 45.0%
ACCAACTTTACTCAGGTTCG+TGG - tig0028331:7241-7260 Msa1437590:intron 45.0%
ACCACGAACCTGAGTAAAGT+TGG + tig0028331:7245-7264 None:intergenic 45.0%
TTATGAAGGGCCTAAAAGGC+GGG - tig0028331:7544-7563 Msa1437590:intron 45.0%
! TCTGAGTGATTTGGAAGACG+AGG - tig0028331:7599-7618 Msa1437590:intron 45.0%
ATGTCCTGTTTGGGAGAAAG+GGG + tig0028331:8011-8030 None:intergenic 45.0%
GAATGTCCTGTTTGGGAGAA+AGG + tig0028331:8013-8032 None:intergenic 45.0%
GGTGACATGAATGTCCTGTT+TGG + tig0028331:8021-8040 None:intergenic 45.0%
TCATGGACCAATTCTCGCAA+TGG - tig0028331:8136-8155 Msa1437590:CDS 45.0%
CAGCATCCGACACAAAATGA+GGG - tig0028331:8442-8461 Msa1437590:intron 45.0%
CCGTACAATCCACAGGATTA+AGG + tig0028331:8522-8541 None:intergenic 45.0%
TTACTGACCGTACAATCCAC+AGG + tig0028331:8529-8548 None:intergenic 45.0%
! TGTGGATTGTACGGTCAGTA+AGG - tig0028331:8528-8547 Msa1437590:CDS 45.0%
! GTGGATTGTACGGTCAGTAA+GGG - tig0028331:8529-8548 Msa1437590:CDS 45.0%
CAGAACCCTTGAATGTCAAC+TGG + tig0028331:8608-8627 None:intergenic 45.0%
! AAGAGGCACAACACTAATCC+TGG - tig0028331:8974-8993 Msa1437590:intron 45.0%
GATCTTCGACTGAATCTGGT+AGG + tig0028331:9430-9449 None:intergenic 45.0%
!! CCCCCCTCTATTTCTATCTT+TGG + tig0028331:9568-9587 None:intergenic 45.0%
AAGATAGAAATAGAGGGGGG+GGG - tig0028331:9568-9587 Msa1437590:CDS 45.0%
!! ATTTATTAAAATTTAATTGT+AGG + tig0028331:5593-5612 Msa1437580:intron 5.0%
! AGGGCCTTTTGATCCCAACT+AGG - tig0028331:3224-3243 Msa1437590:CDS 50.0%
GGCACCTAGTTGGGATCAAA+AGG + tig0028331:3231-3250 Msa1437580:intron 50.0%
!! GTGCCACAAGGTATTGACCA+TGG - tig0028331:3246-3265 Msa1437590:CDS 50.0%
TGACCATGGCTTAGACCCTT+TGG - tig0028331:3260-3279 Msa1437590:intron 50.0%
GAGTGGAAGCTAGATCCATG+GGG + tig0028331:3963-3982 Msa1437580:intron 50.0%
CAGAGTGGAAGCTAGATCCA+TGG + tig0028331:3965-3984 Msa1437580:intron 50.0%
CAGGCAAATCACACGACAGA+GGG - tig0028331:4013-4032 Msa1437590:intron 50.0%
AGGCAAATCACACGACAGAG+GGG - tig0028331:4014-4033 Msa1437590:intron 50.0%
TGCTTAGACTCTGGCGATTG+AGG - tig0028331:4058-4077 Msa1437590:CDS 50.0%
ACAAATCACCCGGAAACACG+TGG - tig0028331:4471-4490 Msa1437590:intron 50.0%
TTCCCAATCCACGTGTTTCC+GGG + tig0028331:4482-4501 Msa1437580:intron 50.0%
CTTCCCAATCCACGTGTTTC+CGG + tig0028331:4483-4502 Msa1437580:intron 50.0%
!! AAACACGTGGATTGGGAAGC+AGG - tig0028331:4484-4503 Msa1437590:intron 50.0%
!! AAGCATAGGAGTGTCGGATC+GGG - tig0028331:4518-4537 Msa1437590:intron 50.0%
! ACCCTTACCACTGTTGGCTA+TGG - tig0028331:4572-4591 Msa1437590:intron 50.0%
CTCCATAGCCAACAGTGGTA+AGG + tig0028331:4577-4596 Msa1437580:intron 50.0%
CTCTGTCAGAACCTTTGCCA+TGG - tig0028331:4709-4728 Msa1437590:intron 50.0%
AGTTAGGAAATGGAGCCTGG+AGG + tig0028331:5150-5169 Msa1437580:intron 50.0%
TGGACTCCCAGAAGGTTTGA+AGG - tig0028331:5960-5979 Msa1437590:intron 50.0%
! CGGCTCTAATTGCTTTAGGC+AGG + tig0028331:6056-6075 Msa1437580:three_prime_UTR 50.0%
TCCCAAATGACTTCTGCCTC+AGG + tig0028331:6754-6773 None:intergenic 50.0%
GAGGCAGAAGTCATTTGGGA+AGG - tig0028331:6754-6773 Msa1437590:intron 50.0%
ATGGAACAGAAGGTCGAGCT+AGG - tig0028331:6907-6926 Msa1437590:intron 50.0%
! CTAGATCCTGGAAGCATGGT+AGG - tig0028331:7082-7101 Msa1437590:intron 50.0%
! TGAGGTCTTTGTGGCTTGCA+AGG + tig0028331:7433-7452 None:intergenic 50.0%
TATGAAGGGCCTAAAAGGCG+GGG - tig0028331:7545-7564 Msa1437590:intron 50.0%
GGTCCCCTTTCCTCAAAACA+TGG + tig0028331:7922-7941 None:intergenic 50.0%
TGTTTGGGAGAAAGGGGCAA+AGG + tig0028331:8005-8024 None:intergenic 50.0%
TTTGCCCCTTTCTCCCAAAC+AGG - tig0028331:8004-8023 Msa1437590:CDS 50.0%
GCAGCATCCGACACAAAATG+AGG - tig0028331:8441-8460 Msa1437590:intron 50.0%
TTGCTATGGCAAGGTAGCCT+AGG - tig0028331:9121-9140 Msa1437590:intron 50.0%
AGATAGAAATAGAGGGGGGG+GGG - tig0028331:9569-9588 Msa1437590:CDS 50.0%
AGATCTATGCGCCCTAAGAG+AGG - tig0028331:9790-9809 Msa1437590:CDS 50.0%
! GATCCCAACTAGGTGCCACA+AGG - tig0028331:3234-3253 Msa1437590:CDS 55.0%
GCAGGCAAATCACACGACAG+AGG - tig0028331:4012-4031 Msa1437590:intron 55.0%
CACGACAGAGGGGAAGTCTT+TGG - tig0028331:4024-4043 Msa1437590:intron 55.0%
TCACCCGGAAACACGTGGAT+TGG - tig0028331:4476-4495 Msa1437590:intron 55.0%
CACCCGGAAACACGTGGATT+GGG - tig0028331:4477-4496 Msa1437590:intron 55.0%
!! GTGGATTGGGAAGCAGGTAG+AGG - tig0028331:4490-4509 Msa1437590:intron 55.0%
TAGGAAATGGAGCCTGGAGG+TGG + tig0028331:5147-5166 Msa1437580:intron 55.0%
GAGGAAAGGGGACCAAGTGA+AGG - tig0028331:7928-7947 Msa1437590:CDS 55.0%
TGGGAGAAAGGGGCAAAGGA+GGG + tig0028331:8001-8020 None:intergenic 55.0%
TTGGGAGAAAGGGGCAAAGG+AGG + tig0028331:8002-8021 None:intergenic 55.0%
GACTAGGCTTGACAGTGGAC+TGG + tig0028331:9333-9352 None:intergenic 55.0%
ATCGGGACTAGGCTTGACAG+TGG + tig0028331:9338-9357 None:intergenic 55.0%
TTTCGTTGGGGTGATGTCCG+TGG + tig0028331:9373-9392 None:intergenic 55.0%
GATAGAAATAGAGGGGGGGG+GGG - tig0028331:9570-9589 Msa1437590:CDS 55.0%
ATAGAAATAGAGGGGGGGGG+GGG - tig0028331:9571-9590 Msa1437590:CDS 55.0%
! CTTCCAGCACCCCGCCTTTT+AGG + tig0028331:7557-7576 None:intergenic 60.0%
AAATAGAGGGGGGGGGGGGA+AGG - tig0028331:9575-9594 Msa1437590:CDS 65.0%
GGGCCTAAAAGGCGGGGTGC+TGG - tig0028331:7551-7570 Msa1437590:intron 70.0%
Chromosome Type Strat End Strand Name
tig0028331 gene 2688 9893 2688 ID=Msa1437590;Name=Msa1437590
tig0028331 mRNA 2688 9893 2688 ID=Msa1437590-mRNA-1;Parent=Msa1437590;Name=Msa1437590-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.91|0.84|1|1|1|13|58|634
tig0028331 exon 2688 2849 2688 ID=Msa1437590-mRNA-1:exon:10808;Parent=Msa1437590-mRNA-1
tig0028331 exon 3117 3266 3117 ID=Msa1437590-mRNA-1:exon:10807;Parent=Msa1437590-mRNA-1
tig0028331 exon 4037 4136 4037 ID=Msa1437590-mRNA-1:exon:10806;Parent=Msa1437590-mRNA-1
tig0028331 exon 4961 5038 4961 ID=Msa1437590-mRNA-1:exon:10805;Parent=Msa1437590-mRNA-1
tig0028331 exon 5326 5511 5326 ID=Msa1437590-mRNA-1:exon:10804;Parent=Msa1437590-mRNA-1
tig0028331 exon 6116 6148 6116 ID=Msa1437590-mRNA-1:exon:10803;Parent=Msa1437590-mRNA-1
tig0028331 exon 6239 6337 6239 ID=Msa1437590-mRNA-1:exon:10802;Parent=Msa1437590-mRNA-1
tig0028331 exon 6423 6662 6423 ID=Msa1437590-mRNA-1:exon:10801;Parent=Msa1437590-mRNA-1
tig0028331 exon 7851 8168 7851 ID=Msa1437590-mRNA-1:exon:10800;Parent=Msa1437590-mRNA-1
tig0028331 exon 8279 8336 8279 ID=Msa1437590-mRNA-1:exon:10799;Parent=Msa1437590-mRNA-1
tig0028331 exon 8478 8642 8478 ID=Msa1437590-mRNA-1:exon:10798;Parent=Msa1437590-mRNA-1
tig0028331 exon 9431 9646 9431 ID=Msa1437590-mRNA-1:exon:10797;Parent=Msa1437590-mRNA-1
tig0028331 exon 9736 9893 9736 ID=Msa1437590-mRNA-1:exon:10796;Parent=Msa1437590-mRNA-1
tig0028331 CDS 9736 9893 9736 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 9431 9646 9431 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 8478 8642 8478 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 8279 8336 8279 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 7851 8168 7851 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 6423 6662 6423 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 6239 6337 6239 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 6116 6148 6116 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 5326 5511 5326 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 4961 5038 4961 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 4037 4136 4037 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 3117 3266 3117 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 CDS 2746 2849 2746 ID=Msa1437590-mRNA-1:cds;Parent=Msa1437590-mRNA-1
tig0028331 three_prime_UTR 2688 2745 2688 ID=Msa1437590-mRNA-1:three_prime_utr;Parent=Msa1437590-mRNA-1
Gene Sequence

>Msa1437590

ATGACGTTGCCATCTCTAGTTAGAAGACGTTCAAGTGGCGAAATAAGGAACTTGGCCTCAATTTCTAGCAGTCTTTTACCAGCATTTGGCACTAATCCTGATGAAGGTTACTTCGACCTAAAAAAATATGTTATTGCTCCCTATGATCGCAGATATAGATTGTGGCAAACGTTCCTAGTGGTATTGGTGGTGTACTCAGCATGGGCATCTCCATTCGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCCATGTTGATTGCTGATCTTGTTGTCGATGCCTTCTTTGCATTTGACATAATCCTGACATTCTTTGTGGCTTACTTGGATAAATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTATGTCAAACATTTATTCTTCCCCATGGATCTAGCTTCCACTCTGCCATTTCAGCAGATATACCAACTTATAGCAGGCAAATCACACGACAGAGGGGAAGTCTTTGGCTTTCTGAACATGCTTAGACTCTGGCGATTGAGGCGTGTTAGTGAGCTCTTCTCAAGGCTAGAGAAAGACATCAGGGTCAGCTACTCAGTAACAAGAGTCTGTAAACTGTTATGCGTTACGCTATTTGCAGTGCATTTCACAGGCTGCGTGTATTTTTGGTTGGCTTTCCATCACAAATCACCCGGAAACACGTGGATTGGGAAGCAGGTAGAGGATTTTAAGCATAGGAGTGTCGGATCGGGTTACACTTACTCCATGTACTGGTCTATTGTAACCCTTACCACTGTTGGCTATGGAGATTTACATGCAGAAAATACAACGGAGAAGGTTTTCAATATTTTTTATATGCTGTTTAACATCGGCCTCACTGCATATATTATCGGAAACATGACAAATCTGGTGGTTCATAGCTCTGTCAGAACCTTTGCCATGAGGGACGCCTTCAACAAAATATTACAATATGCGAGCAAAAATGGACTCCCAGAAGGTTTGAAGGACCAAATGTTGGCACATACACAGCTGAAGTTCAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTGCCTAAAGCAATTAGAGCCGGTATTGCTCAGCATCTTTTCCACAACGTAGTTGAAAAAACAAATTTATTTAAAGGAGTCTCGGATGATTTTATATCCCAGATGGTATCAGATATGAAAGCAGAATACTACCCGTCAAAGGTTGACATCATCTTGCAAAATGAGATGCCGGCATATTTCTACATTTTGGTATCTGGATCAGTGGATGTGTTGATTTTAAAGAATGGGTCTGAACAGTTTTTGTTCAAACTAGATCCTGGAAGCATGGTAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGCTTATACGAATCGATCATCATCATTTCAAGCAGCTGGTGAAACCATTTAATGAAGATGGGAAGGCAATTATCACCAACTTTACTCAGTTTATGAAGGGCCTAAAAGGCGGGGTGCTGGAAGAAATACCGTATGTAACAGAATTTCTGAGTGATTTGGAAGACGAGCATCCGACACAAAATGAGGGCACAAATGATGACATTTCAAAGTACCATGAAGAAAATCCATATGAAGAAGGTAACCTTAATCCTGTGGATTGTACGGTCAGAGAAACAGAAAATTCCAGTCCACTGTCAAGCCTAGTCCCGATTAGAGTCAAAATCCACGGACATCACCCCAACGAAAACATTGAAAATGGAACAACACCAAAGCTCATTATCCTACCAGATTCAGTCGAAGATCTTTTCAGAGTAGCAGAGAACAAGTTTGGAAAAAGAGGAAGCAAAATTCTTATGGCTGATGGCTCAGAAGTAGAAGATCTATGCGCCCTAAGAGAGGACGATGAGTTATATATCATCTAA

Protein sequence

>Msa1437590

MTLPSLVRRRSSGEIRNLASISSSLLPAFGTNPDEGYFDLKKYVIAPYDRRYRLWQTFLVVLVVYSAWASPFELAFREMSIGSMLIADLVVDAFFAFDIILTFFVAYLDKSTYFLVDDHKKIAIRYVKHLFFPMDLASTLPFQQIYQLIAGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSVTRVCKLLCVTLFAVHFTGCVYFWLAFHHKSPGNTWIGKQVEDFKHRSVGSGYTYSMYWSIVTLTTVGYGDLHAENTTEKVFNIFYMLFNIGLTAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPEGLKDQMLAHTQLKFKTAELQQEEVLQDLPKAIRAGIAQHLFHNVVEKTNLFKGVSDDFISQMVSDMKAEYYPSKVDIILQNEMPAYFYILVSGSVDVLILKNGSEQFLFKLDPGSMVGEIGVMFNIPQPYTVRSRRLSQLIRIDHHHFKQLVKPFNEDGKAIITNFTQFMKGLKGGVLEEIPYVTEFLSDLEDEHPTQNEGTNDDISKYHEENPYEEGNLNPVDCTVRETENSSPLSSLVPIRVKIHGHHPNENIENGTTPKLIILPDSVEDLFRVAENKFGKRGSKILMADGSEVEDLCALREDDELYII*