AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0086370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086370 MtrunA17_Chr1g0202291 96.546 579 11 2 1 573 1 576 0.0 1154
Msa0086370 MtrunA17_Chr6g0463101 83.882 577 82 4 1 569 1 574 0.0 993
Msa0086370 MtrunA17_Chr5g0400361 74.098 471 116 1 105 569 76 546 0.0 726
Msa0086370 MtrunA17_Chr1g0188101 45.493 477 232 8 106 555 89 564 1.88e-124 377
Msa0086370 MtrunA17_Chr1g0206791 41.273 487 261 10 106 569 16 500 2.56e-113 347
Msa0086370 MtrunA17_Chr6g0448901 36.667 480 255 12 107 545 21 492 2.68e-85 274
Msa0086370 MtrunA17_Chr4g0043311 39.268 410 225 8 107 500 8 409 1.08e-84 272
Msa0086370 MtrunA17_Chr4g0043301 38.350 412 226 9 107 500 11 412 4.41e-82 265
Msa0086370 MtrunA17_Chr7g0263711 35.270 482 259 12 107 545 11 482 1.66e-81 264
Msa0086370 MtrunA17_Chr1g0197911 29.208 404 266 11 108 494 30 430 1.25e-43 163
Msa0086370 MtrunA17_Chr7g0265591 26.804 485 310 13 108 549 30 512 1.01e-42 160
Msa0086370 MtrunA17_Chr1g0179541 28.362 409 248 11 108 494 30 415 6.59e-41 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0086370 AT5G52920.1 78.929 579 112 2 1 569 1 579 0.0 940
Msa0086370 AT1G32440.1 76.433 471 104 2 105 569 98 567 0.0 747
Msa0086370 AT3G22960.1 46.737 475 227 8 106 555 117 590 3.81e-127 385
Msa0086370 AT3G55650.1 34.765 489 278 10 96 545 6 492 5.78e-86 276
Msa0086370 AT3G25960.1 35.565 478 276 10 96 545 6 479 4.16e-85 273
Msa0086370 AT5G56350.1 38.983 413 226 9 105 500 7 410 1.45e-83 270
Msa0086370 AT5G63680.3 36.998 473 263 10 107 545 21 492 7.97e-83 268
Msa0086370 AT5G63680.1 36.998 473 263 10 107 545 21 492 7.97e-83 268
Msa0086370 AT5G63680.2 36.998 473 263 10 107 545 21 492 7.97e-83 268
Msa0086370 AT4G26390.1 35.270 482 276 10 105 551 6 486 3.84e-82 266
Msa0086370 AT3G04050.1 34.096 481 276 10 104 545 14 492 4.15e-82 266
Msa0086370 AT5G08570.1 36.920 474 262 12 107 545 21 492 5.65e-82 266
Msa0086370 AT5G08570.2 36.920 474 262 12 107 545 21 492 5.65e-82 266
Msa0086370 AT5G08570.3 36.920 474 262 12 107 545 21 492 5.65e-82 266
Msa0086370 AT3G55810.1 32.515 489 271 11 96 545 6 474 2.49e-71 237
Msa0086370 AT2G36580.1 28.337 487 300 14 108 549 30 512 2.57e-46 171
Msa0086370 AT3G52990.1 29.803 406 262 11 108 494 30 431 2.16e-44 165
Msa0086370 AT3G52990.2 29.058 382 248 11 132 494 1 378 1.50e-38 148
Msa0086370 AT3G49160.3 29.258 229 144 6 215 432 385 606 8.02e-19 90.9
Msa0086370 AT3G49160.1 29.258 229 144 6 215 432 473 694 8.16e-19 90.9

Find 184 sgRNAs with CRISPR-Local

Find 465 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACAAGTTGGTAATGTTTC+TGG 0.172900 1_2:-67105951 Msa0086370:CDS
TCCGATGGAATAATGCTTTC+TGG 0.190585 1_2:-67103091 Msa0086370:CDS
GATTGGGATGACATCAAATT+TGG 0.216798 1_2:-67104598 Msa0086370:CDS
AGACTTAGGTGGTAAGATTT+TGG 0.227137 1_2:+67106251 None:intergenic
ACTAAGATTGTTTGTACTAT+TGG 0.260506 1_2:-67105894 Msa0086370:CDS
TTGATACCAATCTTGCATTT+TGG 0.271787 1_2:-67101053 Msa0086370:three_prime_UTR
CTGATCAGTAAAAGCAAATA+TGG 0.278721 1_2:+67102421 None:intergenic
TTGAATACTTGGCCAATATT+AGG 0.283361 1_2:+67102710 None:intergenic
ATTACTTTCGCAGCTTTAAT+TGG 0.294022 1_2:+67102785 None:intergenic
AGAGAGGGAGGGAGGGAGGG+AGG 0.297982 1_2:+67106395 None:intergenic
TTCTTCTGTAAACTCTTCTA+TGG 0.307511 1_2:-67100957 Msa0086370:three_prime_UTR
AAGAAACGGCGGAGACAAAT+AGG 0.310420 1_2:+67106461 None:intergenic
TCAGAGAATTCCATGTAAAT+AGG 0.315231 1_2:+67101677 None:intergenic
ATCAATAACTTCACATTTCA+CGG 0.319798 1_2:+67104847 None:intergenic
CCATTCCACTCACAATATTC+AGG 0.322453 1_2:-67101160 Msa0086370:CDS
AATATAACAGTCCCGGGATA+TGG 0.334153 1_2:+67100851 None:intergenic
ATTTCCTTTGTATTAGTAGA+AGG 0.347373 1_2:+67105870 None:intergenic
AAAAGCCTTGGATTTGTTGC+AGG 0.348377 1_2:-67101633 Msa0086370:intron
CTAATACAAAGGAAATGATT+TGG 0.354416 1_2:-67105863 Msa0086370:CDS
TGAGGACTTTCTTGCATTGA+TGG 0.364054 1_2:+67106194 None:intergenic
GAATCATCTTCGGGTGATAC+AGG 0.367392 1_2:+67106156 None:intergenic
AGAGAGAGAGGGAGGGAGGG+AGG 0.370820 1_2:+67106391 None:intergenic
CAATGCAGGAAGAGATAATA+AGG 0.371949 1_2:-67103234 Msa0086370:intron
AAAGTACAGTGGTACACTTT+TGG 0.377015 1_2:-67106582 Msa0086370:five_prime_UTR
TGGTGCCTGCAGGTCGATAA+TGG 0.377025 1_2:+67102441 None:intergenic
CTTCACTAGATCGGGTTTCA+TGG 0.377434 1_2:-67102477 Msa0086370:CDS
AAAAGCGGAACCTCCTCAAT+AGG 0.380743 1_2:+67103374 None:intergenic
CGGAGACATTTGAATGTTAG+AGG 0.383246 1_2:-67104806 Msa0086370:CDS
GGATAGTAAAAGTGAATTCC+TGG 0.383564 1_2:+67105537 None:intergenic
CATACTTTCCAGCATATTTG+TGG 0.385316 1_2:+67103177 None:intergenic
CATATGTTAGTTCATGTCAT+TGG 0.385820 1_2:-67100912 Msa0086370:three_prime_UTR
TCCCTCTTACGACCCACTTC+AGG 0.386910 1_2:-67106324 Msa0086370:CDS
CTATGCCGTTTCTTTCGTTA+AGG 0.387859 1_2:-67104554 Msa0086370:CDS
TGAATAGATTGAGGCGGAGT+TGG 0.395795 1_2:-67105991 Msa0086370:intron
GAGAGAGAGGGAGGGAGGGA+GGG 0.400317 1_2:+67106392 None:intergenic
ACCTCTGCTCTGGTTGGCGT+GGG 0.401155 1_2:+67103145 None:intergenic
ATTTGGAAACTTGCTGAGGC+TGG 0.403880 1_2:-67105846 Msa0086370:CDS
GGAGGGAGGGAGGTGAAGAT+TGG 0.404082 1_2:+67106405 None:intergenic
CGAACCTTTGAATCATCTTC+GGG 0.408051 1_2:+67106147 None:intergenic
ACGAACCTTTGAATCATCTT+CGG 0.411144 1_2:+67106146 None:intergenic
CATATTTGTGGCTACAATAA+CGG 0.414729 1_2:+67103189 None:intergenic
ACTGTTGTCTTCACTAGATC+GGG 0.417400 1_2:-67102485 Msa0086370:CDS
GGTTCAATATTTAGTTAGAA+TGG 0.418276 1_2:-67100936 Msa0086370:three_prime_UTR
CATTAACGTTGTTGGTTGGT+TGG 0.424605 1_2:-67106537 Msa0086370:five_prime_UTR
GGGCAGATGCCACCTAATAT+TGG 0.424869 1_2:-67102722 Msa0086370:CDS
AAAGTGGAAGGCAACCTATA+TGG 0.425350 1_2:-67101188 Msa0086370:CDS
AAATAACCAAAATGCAAGAT+TGG 0.425896 1_2:+67101047 None:intergenic
CAGAGGTTGGCTTTGTATCA+AGG 0.427960 1_2:-67101707 Msa0086370:intron
GAGGTTCTGAAGCAAAGCTT+AGG 0.428198 1_2:+67106219 None:intergenic
AAGTTTAGACCTTGAATACT+TGG 0.428867 1_2:+67102699 None:intergenic
ATTTGTTGCAGAAAAGGATT+GGG 0.432529 1_2:-67104614 Msa0086370:intron
TTAAGTCGCATTAACGTTGT+TGG 0.438329 1_2:-67106545 Msa0086370:five_prime_UTR
TTAGTCTTTCTTCTAACCAT+TGG 0.438719 1_2:+67105912 None:intergenic
ATGTCTCAGGTTGCAACCAC+TGG 0.442324 1_2:-67106360 Msa0086370:CDS
GTGAAATGTGAAGTTATTGA+TGG 0.443185 1_2:-67104845 Msa0086370:CDS
TTTCACGGAATCCGCTGTCT+TGG 0.445544 1_2:+67104862 None:intergenic
TGTTTCCATATGCAGAAGAA+TGG 0.453443 1_2:-67101246 Msa0086370:intron
AACTGTTGTCTTCACTAGAT+CGG 0.453467 1_2:-67102486 Msa0086370:CDS
AATTTGTTGCAGAAAAGGAT+TGG 0.453541 1_2:-67104615 Msa0086370:intron
AACGTTGTTGGTTGGTTGGT+TGG 0.456115 1_2:-67106533 Msa0086370:five_prime_UTR
TTGGTGAAGGGGATCGAAGA+AGG 0.456711 1_2:+67106424 None:intergenic
GTTGCCTTCCACTTTGTACA+AGG 0.457075 1_2:+67101196 None:intergenic
ACATTGTAGTAGAGAGAGAG+AGG 0.461297 1_2:+67106379 None:intergenic
TCAATTATTACTGCATCTGA+TGG 0.461675 1_2:-67104321 Msa0086370:CDS
ACCATGATGTCTAATACTCT+TGG 0.463318 1_2:-67102515 Msa0086370:CDS
TCTCTCTACTACAATGTCTC+AGG 0.466077 1_2:-67106373 Msa0086370:exon
AATTTGTGGCGGCTACTGTT+CGG 0.466689 1_2:+67101136 None:intergenic
TAATATTGGCCAAGTATTCA+AGG 0.466771 1_2:-67102708 Msa0086370:intron
AGGTGGTATGATGTCCTTCT+TGG 0.469108 1_2:-67104891 Msa0086370:CDS
GTAATAATTGAATGCAAGTT+CGG 0.469193 1_2:+67104333 None:intergenic
TCATAAGAAAGTTATTGATC+TGG 0.471221 1_2:-67105778 Msa0086370:CDS
TCCAAGAGTATTAGACATCA+TGG 0.474709 1_2:+67102514 None:intergenic
ATGGTTGCAAGAGGAGATCT+TGG 0.484762 1_2:-67103407 Msa0086370:CDS
AGGTTCTGAAGCAAAGCTTA+GGG 0.485710 1_2:+67106220 None:intergenic
TAATGCACACCGTAGCATTA+CGG 0.486804 1_2:-67102766 Msa0086370:CDS
GGGGACATGCTTCTTGTTGA+CGG 0.487278 1_2:-67105446 Msa0086370:intron
AGAAACGGCGGAGACAAATA+GGG 0.487777 1_2:+67106462 None:intergenic
AGAGACATTCACAAAAGCCT+TGG 0.488109 1_2:-67101645 Msa0086370:CDS
TCGTAAGAGGGAGGTTTGAA+TGG 0.491999 1_2:+67106335 None:intergenic
TTTGTCAATGATGTTGAAGA+AGG 0.492314 1_2:-67105467 Msa0086370:CDS
AAAGTCTAACCAGTGATTGA+AGG 0.493534 1_2:+67104767 None:intergenic
CAATTATTACTGCATCTGAT+GGG 0.495858 1_2:-67104320 Msa0086370:CDS
TACCTCTGCTCTGGTTGGCG+TGG 0.497055 1_2:+67103144 None:intergenic
AAAGCGGAACCTCCTCAATA+GGG 0.498685 1_2:+67103375 None:intergenic
GAGGACTTTCTTGCATTGAT+GGG 0.499803 1_2:+67106195 None:intergenic
AGAGGTTGAAACTTAATTTG+TGG 0.499961 1_2:+67101122 None:intergenic
AAGAATGGAATGGTTAAAGA+AGG 0.500527 1_2:-67101231 Msa0086370:CDS
TCCAGAAAGCATTATTCCAT+CGG 0.500745 1_2:+67103090 None:intergenic
AATCACATTCAGCCATATCC+CGG 0.503303 1_2:-67100863 Msa0086370:three_prime_UTR
TATTGTAGCCACAAATATGC+TGG 0.504931 1_2:-67103185 Msa0086370:CDS
GATCGAAGAAGGGAATGAGT+TGG 0.512474 1_2:+67106435 None:intergenic
TTTACTATCCAGAGTGGCGT+TGG 0.515163 1_2:-67105524 Msa0086370:CDS
AGGGAGGTGAAGATTGGTGA+AGG 0.515494 1_2:+67106411 None:intergenic
ATCCTGAAGTGGGTCGTAAG+AGG 0.515645 1_2:+67106322 None:intergenic
CAAGCTAAATATAACAGTCC+CGG 0.519525 1_2:+67100844 None:intergenic
GCAACACTGCCTTCAATCAC+TGG 0.520688 1_2:-67104776 Msa0086370:intron
CAGCAGTTCCAACGCCACTC+TGG 0.522112 1_2:+67105516 None:intergenic
TGCAATTATGCTTGACACCA+AGG 0.524078 1_2:-67105718 Msa0086370:intron
TCCTGAAGTGGGTCGTAAGA+GGG 0.525049 1_2:+67106323 None:intergenic
AATATCAGATACCTCTGCTC+TGG 0.526914 1_2:+67103135 None:intergenic
TGGTGAAGGGGATCGAAGAA+GGG 0.527445 1_2:+67106425 None:intergenic
GTGGAATGGAACCTCCATAT+AGG 0.530502 1_2:+67101174 None:intergenic
TGCATCCTTAACGAAAGAAA+CGG 0.532070 1_2:+67104549 None:intergenic
GAAGTAGCCCTTGTACAAAG+TGG 0.532110 1_2:-67101204 Msa0086370:CDS
AAATCCCCACTCCTAACCTC+TGG 0.533231 1_2:+67105587 None:intergenic
GTCGCATTAACGTTGTTGGT+TGG 0.534858 1_2:-67106541 Msa0086370:five_prime_UTR
TTGTCAATGATGTTGAAGAA+GGG 0.535922 1_2:-67105466 Msa0086370:CDS
TTGAGCCATTATCGACCTGC+AGG 0.540869 1_2:-67102446 Msa0086370:CDS
AATAAGGATATGCCGTAGCA+TGG 0.541078 1_2:-67103218 Msa0086370:CDS
AGGTGTCTGTCCTATTTACA+TGG 0.542712 1_2:-67101687 Msa0086370:CDS
AAAGCAAATATGGTGCCTGC+AGG 0.543058 1_2:+67102431 None:intergenic
TTAGGTGGCATCTGCCCACT+TGG 0.546105 1_2:+67102728 None:intergenic
TGTCAATGATGTTGAAGAAG+GGG 0.549759 1_2:-67105465 Msa0086370:CDS
TCACATGATAATAGTACTCA+AGG 0.556126 1_2:+67100798 None:intergenic
AAGCTAAATATAACAGTCCC+GGG 0.556761 1_2:+67100845 None:intergenic
GGGAGGTGAAGATTGGTGAA+GGG 0.558390 1_2:+67106412 None:intergenic
GGGTCCAGAGGTTAGGAGTG+GGG 0.560273 1_2:-67105591 Msa0086370:CDS
GGAGGTGAAGATTGGTGAAG+GGG 0.561489 1_2:+67106413 None:intergenic
AGGACTTTCTTGCATTGATG+GGG 0.562047 1_2:+67106196 None:intergenic
ATTGCAATTGCTGTTCGAGA+AGG 0.562992 1_2:-67103115 Msa0086370:CDS
GGCTTCTGTCCGTAATGCTA+CGG 0.565887 1_2:+67102757 None:intergenic
GGAAGAGGGTGGACAAGACA+AGG 0.566235 1_2:+67106483 None:intergenic
TGGTCCTTCTACTAATACAA+AGG 0.568271 1_2:-67105874 Msa0086370:CDS
TATTAGACATCATGGTTGCA+TGG 0.571159 1_2:+67102522 None:intergenic
CATTGTAGTAGAGAGAGAGA+GGG 0.571627 1_2:+67106380 None:intergenic
TTGCCTTCCACTTTGTACAA+GGG 0.582360 1_2:+67101197 None:intergenic
GGCGGAGACAAATAGGGAAG+AGG 0.583009 1_2:+67106468 None:intergenic
AGGGACAACTTCAGCAGATG+AGG 0.586458 1_2:+67106176 None:intergenic
TGGTGCAGAACTCCCTATTG+AGG 0.586537 1_2:-67103387 Msa0086370:CDS
GAATGAGTTGGAGAAAGAAA+CGG 0.586920 1_2:+67106447 None:intergenic
GAAAGTTATTGATCTGGTCA+AGG 0.588791 1_2:-67105772 Msa0086370:CDS
AATCATCTTCGGGTGATACA+GGG 0.589652 1_2:+67106157 None:intergenic
GTAATGTTTCTGGTGGAATG+TGG 0.589846 1_2:-67105941 Msa0086370:CDS
TAGGGTCCAGAGGTTAGGAG+TGG 0.590763 1_2:-67105593 Msa0086370:CDS
TCAGATACCTCTGCTCTGGT+TGG 0.594373 1_2:+67103139 None:intergenic
AATACTTGGCCAATATTAGG+TGG 0.594417 1_2:+67102713 None:intergenic
CCATATGCAGAAGAATGGAA+TGG 0.594857 1_2:-67101241 Msa0086370:intron
GTACTTCTAAGAGTATATGT+AGG 0.595611 1_2:+67101095 None:intergenic
AATTACCTGCAACAAATCCA+AGG 0.595893 1_2:+67101628 None:intergenic
CTTTCTGGAGAAACCGCACA+TGG 0.596303 1_2:-67103076 Msa0086370:CDS
CAAGTTGGTAATGTTTCTGG+TGG 0.597270 1_2:-67105948 Msa0086370:CDS
ATCACATTCAGCCATATCCC+GGG 0.597588 1_2:-67100862 Msa0086370:three_prime_UTR
GCGGAGACAAATAGGGAAGA+GGG 0.597719 1_2:+67106469 None:intergenic
CTTCAGGATCTACACATGAC+AGG 0.598783 1_2:-67106308 Msa0086370:CDS
AGGGTCCAGAGGTTAGGAGT+GGG 0.599061 1_2:-67105592 Msa0086370:CDS
ATAAGGATATGCCGTAGCAT+GGG 0.599769 1_2:-67103217 Msa0086370:CDS
GTTCTGAAGCAAAGCTTAGG+GGG 0.600124 1_2:+67106222 None:intergenic
ATTTACTTACTTTCCATGTG+CGG 0.600701 1_2:+67103063 None:intergenic
AATTATTACTGCATCTGATG+GGG 0.603859 1_2:-67104319 Msa0086370:intron
AAAAGATGGAGGCTTTAACA+AGG 0.604406 1_2:+67106278 None:intergenic
TAGCCCTTGTACAAAGTGGA+AGG 0.605384 1_2:-67101200 Msa0086370:CDS
ATGCAAACATCTCGCTCATG+TGG 0.611672 1_2:+67102546 None:intergenic
GGTTCTGAAGCAAAGCTTAG+GGG 0.614196 1_2:+67106221 None:intergenic
CCTGAATATTGTGAGTGGAA+TGG 0.615998 1_2:+67101160 None:intergenic
AGAGTATATGTAGGCCTCAG+AGG 0.616148 1_2:+67101104 None:intergenic
GCTGTTCGAGAAGGTTCCGA+TGG 0.616692 1_2:-67103106 Msa0086370:CDS
CAGAAGCCGCTTTACCAAGT+GGG 0.616792 1_2:-67102742 Msa0086370:CDS
ATCACCCGAAGATGATTCAA+AGG 0.617771 1_2:-67106151 Msa0086370:intron
TGCAGAACTCCCTATTGAGG+AGG 0.618747 1_2:-67103384 Msa0086370:CDS
TTGTGGTGAATAGATTGAGG+CGG 0.619940 1_2:-67105997 Msa0086370:intron
ATGGAGGAGAGCTCGCGTCA+CGG 0.623292 1_2:-67104826 Msa0086370:CDS
GTCTAGGCTATGGTTGCAAG+AGG 0.623939 1_2:-67103416 Msa0086370:intron
GGACTTTCTTGCATTGATGG+GGG 0.628665 1_2:+67106197 None:intergenic
CATCTGCCCACTTGGTAAAG+CGG 0.628930 1_2:+67102736 None:intergenic
TGTCTTGGACTTAACCAAGA+AGG 0.629593 1_2:+67104877 None:intergenic
GGTTGAAACTTAATTTGTGG+CGG 0.634449 1_2:+67101125 None:intergenic
GGAGGTTTGAATGGATCCAG+TGG 0.635775 1_2:+67106344 None:intergenic
CCCCACGCCAACCAGAGCAG+AGG 0.642045 1_2:-67103146 Msa0086370:CDS
CCTCTGCTCTGGTTGGCGTG+GGG 0.646850 1_2:+67103146 None:intergenic
ACAGAAGCCGCTTTACCAAG+TGG 0.649319 1_2:-67102743 Msa0086370:CDS
GCTCGTATGAATATGTCTCA+TGG 0.651990 1_2:-67105813 Msa0086370:CDS
CTTGGTTAAGTCCAAGACAG+CGG 0.652841 1_2:-67104873 Msa0086370:CDS
GTCATGTGTAGATCCTGAAG+TGG 0.656544 1_2:+67106311 None:intergenic
AAATGTGAAGTTATTGATGG+AGG 0.658734 1_2:-67104842 Msa0086370:CDS
AAATTAAGTTTCAACCTCTG+AGG 0.664431 1_2:-67101118 Msa0086370:exon
TGGAATGTGGTCTAAGCCAA+TGG 0.668652 1_2:-67105928 Msa0086370:CDS
TGAAGTGGGTCGTAAGAGGG+AGG 0.672720 1_2:+67106326 None:intergenic
GTGGAAGGCAACCTATATGG+AGG 0.675974 1_2:-67101185 Msa0086370:CDS
AATGATTTGGAAACTTGCTG+AGG 0.679513 1_2:-67105850 Msa0086370:CDS
TCATGTGTAGATCCTGAAGT+GGG 0.693391 1_2:+67106312 None:intergenic
GAGACAAATAGGGAAGAGGG+TGG 0.697052 1_2:+67106472 None:intergenic
TCGGACCTGAATATTGTGAG+TGG 0.700079 1_2:+67101155 None:intergenic
ATCGATCGACGAAAGTACAG+TGG 0.721456 1_2:-67106593 Msa0086370:five_prime_UTR
TGAGTTGGAGAAAGAAACGG+CGG 0.722475 1_2:+67106450 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAAAAAAAAAATTTA+CGG - chr1_2:67105504-67105523 Msa0086370:CDS 0.0%
!! ATTTATATTTATATAAGTCT+AGG + chr1_2:67103475-67103494 None:intergenic 10.0%
!! TAACCAAAAAATAAAATTAT+AGG + chr1_2:67103559-67103578 None:intergenic 10.0%
!! AAAAAAAATAATATTAACAG+GGG + chr1_2:67105341-67105360 None:intergenic 10.0%
!! AATTTCTTGAAAAAAAAAAT+CGG + chr1_2:67105424-67105443 None:intergenic 10.0%
!!! AAAACAAATTTTTTTTACAA+GGG - chr1_2:67105478-67105497 Msa0086370:CDS 10.0%
!! ATAAAAAAAAAAAATTTACG+GGG - chr1_2:67105506-67105525 Msa0086370:CDS 10.0%
!!! TTTATTTTTCTCTGTTTTTT+AGG - chr1_2:67101741-67101760 Msa0086370:intron 15.0%
!!! TTATTTTTCTCTGTTTTTTA+GGG - chr1_2:67101742-67101761 Msa0086370:intron 15.0%
!! AATAAGAAATTATCAAGAAT+GGG + chr1_2:67102623-67102642 None:intergenic 15.0%
!! TAATAAGAAATTATCAAGAA+TGG + chr1_2:67102624-67102643 None:intergenic 15.0%
!! AACAAATTAATGAAATAATG+CGG + chr1_2:67103073-67103092 None:intergenic 15.0%
!! ATAAATTGTTATGACTTATA+TGG - chr1_2:67103493-67103512 Msa0086370:intron 15.0%
!! TAAATTGTTATGACTTATAT+GGG - chr1_2:67103494-67103513 Msa0086370:intron 15.0%
!! AAAAATAAAATTATAGGTCT+AGG + chr1_2:67103553-67103572 None:intergenic 15.0%
!!! AGACCTATAATTTTATTTTT+TGG - chr1_2:67103553-67103572 Msa0086370:intron 15.0%
!!! TTATAAGTTTTTTTGATGAA+AGG - chr1_2:67103696-67103715 Msa0086370:intron 15.0%
!!! TTTTTATAATTTTGTCTGTT+TGG - chr1_2:67103735-67103754 Msa0086370:intron 15.0%
!!! TAGTCTTACTTTTTTTTTTT+TGG - chr1_2:67105125-67105144 Msa0086370:intron 15.0%
!!! AGTCTTACTTTTTTTTTTTT+GGG - chr1_2:67105126-67105145 Msa0086370:intron 15.0%
!! TGCACTTATTATAATTTATA+GGG - chr1_2:67105268-67105287 Msa0086370:intron 15.0%
!! TTATAATTTATAGGGTTAAT+AGG - chr1_2:67105276-67105295 Msa0086370:intron 15.0%
!! AAAAAAATAATATTAACAGG+GGG + chr1_2:67105340-67105359 None:intergenic 15.0%
!!! AAAACAAATTTTTTTTACAG+GGG + chr1_2:67105371-67105390 None:intergenic 15.0%
!!! CAAAACAAATTTTTTTTACA+GGG + chr1_2:67105477-67105496 None:intergenic 15.0%
!!! TCAAAACAAATTTTTTTTAC+AGG + chr1_2:67105476-67105495 None:intergenic 15.0%
!!! CAAAACAAATTTTTTTTACA+AGG - chr1_2:67105477-67105496 Msa0086370:CDS 15.0%
!!! AAACAAATTTTTTTTACAAG+GGG - chr1_2:67105479-67105498 Msa0086370:CDS 15.0%
!! TAAAAAAAAAAAATTTACGG+GGG - chr1_2:67105507-67105526 Msa0086370:CDS 15.0%
!! AATTTAACAAATAACAGTTA+TGG - chr1_2:67105798-67105817 Msa0086370:CDS 15.0%
!! TGAACAAACTAAAATTAAAA+TGG + chr1_2:67106074-67106093 None:intergenic 15.0%
!!! TTTAATTTTTTTTGCTTCAT+AGG - chr1_2:67106326-67106345 Msa0086370:CDS 15.0%
!! TTCATAAGGAAAAAAAATGA+TGG - chr1_2:67101272-67101291 Msa0086370:intron 20.0%
!! TCATAAGGAAAAAAAATGAT+GGG - chr1_2:67101273-67101292 Msa0086370:intron 20.0%
!!! AGTGAGAAAATTTGATTTTT+AGG - chr1_2:67101298-67101317 Msa0086370:intron 20.0%
!! TTTAATGAGAAGGAAAAAAA+AGG + chr1_2:67101665-67101684 None:intergenic 20.0%
!! ACAAATAAACTTTAATGAGA+AGG + chr1_2:67101675-67101694 None:intergenic 20.0%
!! TCTCATTAAAGTTTATTTGT+TGG - chr1_2:67101675-67101694 Msa0086370:CDS 20.0%
!! ACAAATTAATGAAATAATGC+GGG + chr1_2:67103072-67103091 None:intergenic 20.0%
!! AAAAAGAAAAAAGACTTATG+TGG - chr1_2:67103526-67103545 Msa0086370:intron 20.0%
!! AAAAGAAAAAAGACTTATGT+GGG - chr1_2:67103527-67103546 Msa0086370:intron 20.0%
!! CTTAGAAAGGAATATAAATA+TGG - chr1_2:67104408-67104427 Msa0086370:intron 20.0%
!! TATGGTATTTATTATATTGC+AGG - chr1_2:67104542-67104561 Msa0086370:CDS 20.0%
!!! GAAATGTGATTTATTCTTTT+TGG - chr1_2:67104774-67104793 Msa0086370:intron 20.0%
!!! GTCTTACTTTTTTTTTTTTG+GGG - chr1_2:67105127-67105146 Msa0086370:intron 20.0%
!!! TCTTACTTTTTTTTTTTTGG+GGG - chr1_2:67105128-67105147 Msa0086370:intron 20.0%
!! CTGCACTTATTATAATTTAT+AGG - chr1_2:67105267-67105286 Msa0086370:intron 20.0%
!! AAAAAATAATATTAACAGGG+GGG + chr1_2:67105339-67105358 None:intergenic 20.0%
!!! AAACAAATTTTTTTTACAGG+GGG + chr1_2:67105370-67105389 None:intergenic 20.0%
!!! AAAAAAAATCGGTTTTTGTT+TGG + chr1_2:67105413-67105432 None:intergenic 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG - chr1_2:67105436-67105455 Msa0086370:intron 20.0%
!!! AACAAATTTTTTTTACAAGG+GGG - chr1_2:67105480-67105499 Msa0086370:CDS 20.0%
!! AAAAAAAAAAAATTTACGGG+GGG - chr1_2:67105508-67105527 Msa0086370:CDS 20.0%
!! GTCGTTAAAGTTATAAATTA+GGG + chr1_2:67105580-67105599 None:intergenic 20.0%
!! AGTCGTTAAAGTTATAAATT+AGG + chr1_2:67105581-67105600 None:intergenic 20.0%
!! TTTGGAAGATATCTTTAATA+TGG - chr1_2:67105748-67105767 Msa0086370:CDS 20.0%
!! TTGGAAGATATCTTTAATAT+GGG - chr1_2:67105749-67105768 Msa0086370:CDS 20.0%
!!! TTAAATTAGAAGTACTATGT+AGG + chr1_2:67105785-67105804 None:intergenic 20.0%
!! TTTCCTCTCATATTATTATT+TGG - chr1_2:67105840-67105859 Msa0086370:CDS 20.0%
!! AGAAAAACAATAATGAAAAC+AGG + chr1_2:67106380-67106399 None:intergenic 20.0%
! AGCAAAATAAGAATAAGAGA+TGG + chr1_2:67101240-67101259 None:intergenic 25.0%
! ACTAAGATTGTTTGTACTAT+TGG - chr1_2:67101459-67101478 Msa0086370:intron 25.0%
! ATTTCCTTTGTATTAGTAGA+AGG + chr1_2:67101486-67101505 None:intergenic 25.0%
! CTAATACAAAGGAAATGATT+TGG - chr1_2:67101490-67101509 Msa0086370:intron 25.0%
! TCATAAGAAAGTTATTGATC+TGG - chr1_2:67101575-67101594 Msa0086370:intron 25.0%
!! TTGATAACACTGTACTAAAT+AGG - chr1_2:67102192-67102211 Msa0086370:intron 25.0%
! TGATAACACTGTACTAAATA+GGG - chr1_2:67102193-67102212 Msa0086370:intron 25.0%
! ATCAATAACTTCACATTTCA+CGG + chr1_2:67102509-67102528 None:intergenic 25.0%
!! CTTTTCTGCAACAAATTAAA+AGG + chr1_2:67102735-67102754 None:intergenic 25.0%
!!! CTTTTAATTTGTTGCAGAAA+AGG - chr1_2:67102733-67102752 Msa0086370:CDS 25.0%
! GTAATAATTGAATGCAAGTT+CGG + chr1_2:67103023-67103042 None:intergenic 25.0%
! TTAGTGGAAAAGACTTATTT+GGG - chr1_2:67103449-67103468 Msa0086370:intron 25.0%
!! TATAATTTTGTCTGTTTGGT+AGG - chr1_2:67103739-67103758 Msa0086370:intron 25.0%
!!! TTTTATGTTTCTACTACACA+TGG + chr1_2:67103847-67103866 None:intergenic 25.0%
! ACTATGCATTGAAGAAATAT+CGG + chr1_2:67104353-67104372 None:intergenic 25.0%
! AACTGAAATTGAAGAAACAT+CGG + chr1_2:67104388-67104407 None:intergenic 25.0%
! TTCAATTTCAGTTCTTAGAA+AGG - chr1_2:67104395-67104414 Msa0086370:intron 25.0%
!!! TAGTCATCTTCTATTTTAAG+AGG + chr1_2:67104993-67105012 None:intergenic 25.0%
! ATAATCTCTCAAACATACTT+AGG + chr1_2:67105058-67105077 None:intergenic 25.0%
!!! AGATTATTCTGAAACGTATT+GGG - chr1_2:67105071-67105090 Msa0086370:intron 25.0%
!! AAAAGTAAGACTAGTTATTG+AGG + chr1_2:67105118-67105137 None:intergenic 25.0%
! ACAAAATAAATCGAACTGAT+CGG + chr1_2:67105210-67105229 None:intergenic 25.0%
! AAAAATAATATTAACAGGGG+GGG + chr1_2:67105338-67105357 None:intergenic 25.0%
!!! AACAAATTTTTTTTACAGGG+GGG + chr1_2:67105369-67105388 None:intergenic 25.0%
! AAAAAAAAAAATTTACGGGG+GGG - chr1_2:67105509-67105528 Msa0086370:CDS 25.0%
!! CTTTGATGTTTACCTAATTT+TGG - chr1_2:67105599-67105618 Msa0086370:intron 25.0%
! AAGCCAAATAATAATATGAG+AGG + chr1_2:67105846-67105865 None:intergenic 25.0%
! AGAAGTTCATAAATGTGTAA+AGG + chr1_2:67105935-67105954 None:intergenic 25.0%
! AATTAGAACTGAACTCTAAT+AGG - chr1_2:67106028-67106047 Msa0086370:intron 25.0%
! AAATAACCAAAATGCAAGAT+TGG + chr1_2:67106309-67106328 None:intergenic 25.0%
! GGTTCAATATTTAGTTAGAA+TGG - chr1_2:67106417-67106436 Msa0086370:five_prime_UTR 25.0%
!!! TACACTTTTGGAACAAGAAA+AGG - chr1_2:67100783-67100802 Msa0086370:three_prime_UTR 30.0%
!!! ACACTTTTGGAACAAGAAAA+GGG - chr1_2:67100784-67100803 Msa0086370:three_prime_UTR 30.0%
! TTTTCTTCGTTTGTATCGAA+CGG + chr1_2:67100847-67100866 None:intergenic 30.0%
!! AAGATTTTGGAGGAAAAAGA+TGG + chr1_2:67101092-67101111 None:intergenic 30.0%
! CTTCTGTTTCTTGTTTCATA+AGG - chr1_2:67101258-67101277 Msa0086370:intron 30.0%
!!! GAAAATTGTTTTGACCCTTT+TGG - chr1_2:67101330-67101349 Msa0086370:intron 30.0%
ATTCACCACAAAAACCAAAA+GGG + chr1_2:67101347-67101366 None:intergenic 30.0%
TATTCACCACAAAAACCAAA+AGG + chr1_2:67101348-67101367 None:intergenic 30.0%
! TTTTTGTGGTGAATAGATTG+AGG - chr1_2:67101353-67101372 Msa0086370:intron 30.0%
! TTAGTCTTTCTTCTAACCAT+TGG + chr1_2:67101444-67101463 None:intergenic 30.0%
!! GTTTTTAACATGATTGGTTG+TGG + chr1_2:67101793-67101812 None:intergenic 30.0%
CAACCAATCATGTTAAAAAC+TGG - chr1_2:67101793-67101812 Msa0086370:intron 30.0%
TTTGTCAATGATGTTGAAGA+AGG - chr1_2:67101886-67101905 Msa0086370:intron 30.0%
TTGTCAATGATGTTGAAGAA+GGG - chr1_2:67101887-67101906 Msa0086370:intron 30.0%
TTAAATATTGTCTGCTGCAA+AGG - chr1_2:67102052-67102071 Msa0086370:intron 30.0%
TAAATATTGTCTGCTGCAAA+GGG - chr1_2:67102053-67102072 Msa0086370:intron 30.0%
TTGTCAAATGGTTGTTATAG+TGG + chr1_2:67102266-67102285 None:intergenic 30.0%
! TAACTATGCAAAGCACTATA+AGG + chr1_2:67102319-67102338 None:intergenic 30.0%
! AGCTTTGACATTCTTATTGT+CGG - chr1_2:67102340-67102359 Msa0086370:intron 30.0%
GTCAATTTCCTATTTATCTC+TGG - chr1_2:67102371-67102390 Msa0086370:intron 30.0%
TTACACTTCCAGAGATAAAT+AGG + chr1_2:67102382-67102401 None:intergenic 30.0%
AGTCAGAAATTCACATAAGA+TGG + chr1_2:67102427-67102446 None:intergenic 30.0%
GTGAAATGTGAAGTTATTGA+TGG - chr1_2:67102508-67102527 Msa0086370:CDS 30.0%
AAATGTGAAGTTATTGATGG+AGG - chr1_2:67102511-67102530 Msa0086370:CDS 30.0%
TAAGGTTATGTTTGTTTCCA+AGG - chr1_2:67102698-67102717 Msa0086370:intron 30.0%
!! AATTTGTTGCAGAAAAGGAT+TGG - chr1_2:67102738-67102757 Msa0086370:CDS 30.0%
! ATTTGTTGCAGAAAAGGATT+GGG - chr1_2:67102739-67102758 Msa0086370:CDS 30.0%
TCAATTATTACTGCATCTGA+TGG - chr1_2:67103032-67103051 Msa0086370:intron 30.0%
CAATTATTACTGCATCTGAT+GGG - chr1_2:67103033-67103052 Msa0086370:intron 30.0%
AATTATTACTGCATCTGATG+GGG - chr1_2:67103034-67103053 Msa0086370:intron 30.0%
TAATGAAATAATGCGGGATT+AGG + chr1_2:67103066-67103085 None:intergenic 30.0%
!! TCATTAATTTGTTGCCTAAC+TGG - chr1_2:67103080-67103099 Msa0086370:CDS 30.0%
GTTAGTGGAAAAGACTTATT+TGG - chr1_2:67103448-67103467 Msa0086370:intron 30.0%
!!! TTTTGTTCACTGATTTACTC+TGG - chr1_2:67103886-67103905 Msa0086370:intron 30.0%
! AACAATTTTACCTGCAAAAG+CGG + chr1_2:67103997-67104016 None:intergenic 30.0%
!!! TTTGGTGTTTTTTCGATAAC+TGG - chr1_2:67104057-67104076 Msa0086370:intron 30.0%
CATATTTGTGGCTACAATAA+CGG + chr1_2:67104167-67104186 None:intergenic 30.0%
ATTTACTTACTTTCCATGTG+CGG + chr1_2:67104293-67104312 None:intergenic 30.0%
TGATTTAGAAGACGAATCTA+AGG - chr1_2:67104491-67104510 Msa0086370:intron 30.0%
TACAGAAAGCGACAATAATA+TGG - chr1_2:67104524-67104543 Msa0086370:CDS 30.0%
! ATTACTTTCGCAGCTTTAAT+TGG + chr1_2:67104571-67104590 None:intergenic 30.0%
TTGAATACTTGGCCAATATT+AGG + chr1_2:67104646-67104665 None:intergenic 30.0%
TAATATTGGCCAAGTATTCA+AGG - chr1_2:67104645-67104664 Msa0086370:intron 30.0%
AAGTTTAGACCTTGAATACT+TGG + chr1_2:67104657-67104676 None:intergenic 30.0%
!! AACTACCCTCATTTTAATGT+CGG - chr1_2:67104723-67104742 Msa0086370:intron 30.0%
CGGCAATGAATAAAATATTC+CGG - chr1_2:67104743-67104762 Msa0086370:intron 30.0%
CTGATCAGTAAAAGCAAATA+TGG + chr1_2:67104935-67104954 None:intergenic 30.0%
!! GAGATTATTCTGAAACGTAT+TGG - chr1_2:67105070-67105089 Msa0086370:intron 30.0%
!! GATTATTCTGAAACGTATTG+GGG - chr1_2:67105072-67105091 Msa0086370:intron 30.0%
!!! ACTTTTTTTTTTTTGGGGGT+TGG - chr1_2:67105132-67105151 Msa0086370:intron 30.0%
! TGATGTTTACCTAATTTTGG+TGG - chr1_2:67105602-67105621 Msa0086370:intron 30.0%
TCAGAGAATTCCATGTAAAT+AGG + chr1_2:67105679-67105698 None:intergenic 30.0%
TCGAACATTTAACCATGTAT+AGG - chr1_2:67105871-67105890 Msa0086370:CDS 30.0%
! AACTCAGTTGACATTTTCAT+TGG + chr1_2:67105999-67106018 None:intergenic 30.0%
! TAATAGGACTTGCTTAAACA+AGG - chr1_2:67106044-67106063 Msa0086370:intron 30.0%
AAGAATGGAATGGTTAAAGA+AGG - chr1_2:67106122-67106141 Msa0086370:intron 30.0%
! AGAGGTTGAAACTTAATTTG+TGG + chr1_2:67106234-67106253 None:intergenic 30.0%
AAATTAAGTTTCAACCTCTG+AGG - chr1_2:67106235-67106254 Msa0086370:CDS 30.0%
! GTACTTCTAAGAGTATATGT+AGG + chr1_2:67106261-67106280 None:intergenic 30.0%
! TTGATACCAATCTTGCATTT+TGG - chr1_2:67106300-67106319 Msa0086370:CDS 30.0%
TTCTTCTGTAAACTCTTCTA+TGG - chr1_2:67106396-67106415 Msa0086370:five_prime_UTR 30.0%
CATATGTTAGTTCATGTCAT+TGG - chr1_2:67106441-67106460 Msa0086370:five_prime_UTR 30.0%
TCACATGATAATAGTACTCA+AGG + chr1_2:67106558-67106577 None:intergenic 30.0%
! AAAGTACAGTGGTACACTTT+TGG - chr1_2:67100771-67100790 Msa0086370:three_prime_UTR 35.0%
TTAAGTCGCATTAACGTTGT+TGG - chr1_2:67100808-67100827 Msa0086370:three_prime_UTR 35.0%
! GAATGAGTTGGAGAAAGAAA+CGG + chr1_2:67100909-67100928 None:intergenic 35.0%
! AAAAGATGGAGGCTTTAACA+AGG + chr1_2:67101078-67101097 None:intergenic 35.0%
!! ATTTTGGAGGAAAAAGATGG+AGG + chr1_2:67101089-67101108 None:intergenic 35.0%
! AGACTTAGGTGGTAAGATTT+TGG + chr1_2:67101105-67101124 None:intergenic 35.0%
ACGAACCTTTGAATCATCTT+CGG + chr1_2:67101210-67101229 None:intergenic 35.0%
!!! TTTGACCCTTTTGGTTTTTG+TGG - chr1_2:67101339-67101358 Msa0086370:intron 35.0%
!! CAACAAGTTGGTAATGTTTC+TGG - chr1_2:67101402-67101421 Msa0086370:intron 35.0%
TGGTCCTTCTACTAATACAA+AGG - chr1_2:67101479-67101498 Msa0086370:intron 35.0%
!! AATGATTTGGAAACTTGCTG+AGG - chr1_2:67101503-67101522 Msa0086370:intron 35.0%
GAAAGTTATTGATCTGGTCA+AGG - chr1_2:67101581-67101600 Msa0086370:intron 35.0%
AGGAAAAAAAAGGCTTACCT+TGG + chr1_2:67101655-67101674 None:intergenic 35.0%
GTTGGTATGATGATATCTTC+AGG - chr1_2:67101693-67101712 Msa0086370:CDS 35.0%
TGATGATATCTTCAGGATCA+CGG - chr1_2:67101700-67101719 Msa0086370:CDS 35.0%
! TGGCCAGTTTTTAACATGAT+TGG + chr1_2:67101799-67101818 None:intergenic 35.0%
AATCATGTTAAAAACTGGCC+AGG - chr1_2:67101798-67101817 Msa0086370:intron 35.0%
GGATAGTAAAAGTGAATTCC+TGG + chr1_2:67101819-67101838 None:intergenic 35.0%
!! TTCACTTTTACTATCCAGAG+TGG - chr1_2:67101823-67101842 Msa0086370:intron 35.0%
TGTCAATGATGTTGAAGAAG+GGG - chr1_2:67101888-67101907 Msa0086370:intron 35.0%
GTGCTAAATGATTGCTGAAT+CGG - chr1_2:67101984-67102003 Msa0086370:intron 35.0%
AAATATTGTCTGCTGCAAAG+GGG - chr1_2:67102054-67102073 Msa0086370:intron 35.0%
! GTGTTGTCGTTTGTCAATTA+CGG - chr1_2:67102107-67102126 Msa0086370:intron 35.0%
TTGGGATCAATGTTGTCAAA+TGG + chr1_2:67102278-67102297 None:intergenic 35.0%
ATTTGACAACATTGATCCCA+AGG - chr1_2:67102277-67102296 Msa0086370:intron 35.0%
! AGAACCAAGTCATTGATTAC+AGG - chr1_2:67102401-67102420 Msa0086370:intron 35.0%
TGACTCTTGATGTATGATGT+AGG - chr1_2:67102442-67102461 Msa0086370:CDS 35.0%
AAAGTCTAACCAGTGATTGA+AGG + chr1_2:67102589-67102608 None:intergenic 35.0%
! TTCAATCACTGGTTAGACTT+TGG - chr1_2:67102588-67102607 Msa0086370:intron 35.0%
! TTTTTCGTCTTCTCTGTATG+TGG - chr1_2:67102655-67102674 Msa0086370:intron 35.0%
GATTGGGATGACATCAAATT+TGG - chr1_2:67102755-67102774 Msa0086370:CDS 35.0%
TGCATCCTTAACGAAAGAAA+CGG + chr1_2:67102807-67102826 None:intergenic 35.0%
TTATGATGAAGGAGAAGACT+AGG - chr1_2:67103415-67103434 Msa0086370:intron 35.0%
GATCTCACTAAAGATAGTTG+GGG + chr1_2:67103811-67103830 None:intergenic 35.0%
GGATCTCACTAAAGATAGTT+GGG + chr1_2:67103812-67103831 None:intergenic 35.0%
TACACATGGTTGTCAAAATC+GGG + chr1_2:67103833-67103852 None:intergenic 35.0%
CTACACATGGTTGTCAAAAT+CGG + chr1_2:67103834-67103853 None:intergenic 35.0%
CTTATTATCTCTTCCTGCAT+TGG + chr1_2:67104121-67104140 None:intergenic 35.0%
CAATGCAGGAAGAGATAATA+AGG - chr1_2:67104119-67104138 Msa0086370:intron 35.0%
TATTGTAGCCACAAATATGC+TGG - chr1_2:67104168-67104187 Msa0086370:intron 35.0%
CATACTTTCCAGCATATTTG+TGG + chr1_2:67104179-67104198 None:intergenic 35.0%
!! TCCAGAAAGCATTATTCCAT+CGG + chr1_2:67104266-67104285 None:intergenic 35.0%
TAACTATGCACATTGAGATG+TGG + chr1_2:67104320-67104339 None:intergenic 35.0%
AATACTTGGCCAATATTAGG+TGG + chr1_2:67104643-67104662 None:intergenic 35.0%
CATTGCCGACATTAAAATGA+GGG + chr1_2:67104731-67104750 None:intergenic 35.0%
TCATTGCCGACATTAAAATG+AGG + chr1_2:67104732-67104751 None:intergenic 35.0%
AATCACATTTCAGTGTCAAC+CGG + chr1_2:67104765-67104784 None:intergenic 35.0%
TATTAGACATCATGGTTGCA+TGG + chr1_2:67104834-67104853 None:intergenic 35.0%
ACCATGATGTCTAATACTCT+TGG - chr1_2:67104838-67104857 Msa0086370:CDS 35.0%
!! TCCAAGAGTATTAGACATCA+TGG + chr1_2:67104842-67104861 None:intergenic 35.0%
AACTGTTGTCTTCACTAGAT+CGG - chr1_2:67104867-67104886 Msa0086370:CDS 35.0%
GGTTTAAGCAACAAGAGAAA+GGG + chr1_2:67104972-67104991 None:intergenic 35.0%
AGGTTTAAGCAACAAGAGAA+AGG + chr1_2:67104973-67104992 None:intergenic 35.0%
ACGTATTGGGGTAAATTGTT+TGG - chr1_2:67105084-67105103 Msa0086370:intron 35.0%
ATCGAACTGATCGGTTAATA+AGG + chr1_2:67105201-67105220 None:intergenic 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG - chr1_2:67105387-67105406 Msa0086370:intron 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG + chr1_2:67105448-67105467 None:intergenic 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG + chr1_2:67105447-67105466 None:intergenic 35.0%
!! GGTTTTTGTTTGGCCTATTA+GGG + chr1_2:67105403-67105422 None:intergenic 35.0%
!! TCGTTTTTGTTTGGCCTATT+AGG - chr1_2:67105445-67105464 Msa0086370:intron 35.0%
!! CGTTTTTGTTTGGCCTATTA+GGG - chr1_2:67105446-67105465 Msa0086370:intron 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG - chr1_2:67105447-67105466 Msa0086370:CDS 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG - chr1_2:67105448-67105467 Msa0086370:CDS 35.0%
!!! TTTTGATTTACCCCCCTAAT+AGG + chr1_2:67105387-67105406 None:intergenic 35.0%
CCTGTAATATAGGTCATTTC+CGG + chr1_2:67105539-67105558 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG - chr1_2:67105537-67105556 Msa0086370:CDS 35.0%
GGAAATGACCTATATTACAG+GGG - chr1_2:67105538-67105557 Msa0086370:CDS 35.0%
GAAATGACCTATATTACAGG+GGG - chr1_2:67105539-67105558 Msa0086370:CDS 35.0%
AAATGACCTATATTACAGGG+GGG - chr1_2:67105540-67105559 Msa0086370:CDS 35.0%
TGCATGAATGAACCTATACA+TGG + chr1_2:67105886-67105905 None:intergenic 35.0%
TATAGGTTCATTCATGCATG+CGG - chr1_2:67105888-67105907 Msa0086370:CDS 35.0%
CATAAATGTGTAAAGGTCGA+TGG + chr1_2:67105928-67105947 None:intergenic 35.0%
TGTTTCCATATGCAGAAGAA+TGG - chr1_2:67106107-67106126 Msa0086370:intron 35.0%
!! GGTTGAAACTTAATTTGTGG+CGG + chr1_2:67106231-67106250 None:intergenic 35.0%
!! AGAAGTACACATCCTCTTTT+TGG - chr1_2:67106273-67106292 Msa0086370:CDS 35.0%
AAGCTAAATATAACAGTCCC+GGG + chr1_2:67106511-67106530 None:intergenic 35.0%
CAAGCTAAATATAACAGTCC+CGG + chr1_2:67106512-67106531 None:intergenic 35.0%
! CATTAACGTTGTTGGTTGGT+TGG - chr1_2:67100816-67100835 Msa0086370:three_prime_UTR 40.0%
CATTGTAGTAGAGAGAGAGA+GGG + chr1_2:67100976-67100995 None:intergenic 40.0%
ACATTGTAGTAGAGAGAGAG+AGG + chr1_2:67100977-67100996 None:intergenic 40.0%
TCTCTCTACTACAATGTCTC+AGG - chr1_2:67100980-67100999 Msa0086370:three_prime_UTR 40.0%
TCATGTGTAGATCCTGAAGT+GGG + chr1_2:67101044-67101063 None:intergenic 40.0%
! CTTAGGTGGTAAGATTTTGG+AGG + chr1_2:67101102-67101121 None:intergenic 40.0%
TTAGGGGGATTGTTAGACTT+AGG + chr1_2:67101119-67101138 None:intergenic 40.0%
!! AGGTTCTGAAGCAAAGCTTA+GGG + chr1_2:67101136-67101155 None:intergenic 40.0%
! AGGACTTTCTTGCATTGATG+GGG + chr1_2:67101160-67101179 None:intergenic 40.0%
! GAGGACTTTCTTGCATTGAT+GGG + chr1_2:67101161-67101180 None:intergenic 40.0%
TGAGGACTTTCTTGCATTGA+TGG + chr1_2:67101162-67101181 None:intergenic 40.0%
AATCATCTTCGGGTGATACA+GGG + chr1_2:67101199-67101218 None:intergenic 40.0%
ATCACCCGAAGATGATTCAA+AGG - chr1_2:67101202-67101221 Msa0086370:CDS 40.0%
CGAACCTTTGAATCATCTTC+GGG + chr1_2:67101209-67101228 None:intergenic 40.0%
TTGTGGTGAATAGATTGAGG+CGG - chr1_2:67101356-67101375 Msa0086370:intron 40.0%
! CTACACGTTTTGCAACAAGT+TGG - chr1_2:67101390-67101409 Msa0086370:intron 40.0%
!! CAAGTTGGTAATGTTTCTGG+TGG - chr1_2:67101405-67101424 Msa0086370:intron 40.0%
!! GTAATGTTTCTGGTGGAATG+TGG - chr1_2:67101412-67101431 Msa0086370:intron 40.0%
GCTCGTATGAATATGTCTCA+TGG - chr1_2:67101540-67101559 Msa0086370:intron 40.0%
TGCAATTATGCTTGACACCA+AGG - chr1_2:67101635-67101654 Msa0086370:CDS 40.0%
!!! TTTTTTAGGGTCCAGAGGTT+AGG - chr1_2:67101755-67101774 Msa0086370:intron 40.0%
AATATTGTCTGCTGCAAAGG+GGG - chr1_2:67102055-67102074 Msa0086370:intron 40.0%
CAATTACGGATCGAGGAAAA+TGG - chr1_2:67102121-67102140 Msa0086370:intron 40.0%
ATGGCCTGTAATCAATGACT+TGG + chr1_2:67102408-67102427 None:intergenic 40.0%
CTCTTGATGTATGATGTAGG+TGG - chr1_2:67102445-67102464 Msa0086370:CDS 40.0%
TGTCTTGGACTTAACCAAGA+AGG + chr1_2:67102479-67102498 None:intergenic 40.0%
CGGAGACATTTGAATGTTAG+AGG - chr1_2:67102547-67102566 Msa0086370:CDS 40.0%
! TCTGTATGTGGCTGTTGATT+TGG - chr1_2:67102667-67102686 Msa0086370:intron 40.0%
!! TATGTGGCTGTTGATTTGGT+TGG - chr1_2:67102671-67102690 Msa0086370:intron 40.0%
!! ATGTGGCTGTTGATTTGGTT+GGG - chr1_2:67102672-67102691 Msa0086370:intron 40.0%
AAAAGGAATGTTATGCGCCT+TGG + chr1_2:67102718-67102737 None:intergenic 40.0%
! CTATGCCGTTTCTTTCGTTA+AGG - chr1_2:67102799-67102818 Msa0086370:intron 40.0%
CAATCGAGCAAACTAATCAC+TGG + chr1_2:67102911-67102930 None:intergenic 40.0%
CAATTCCACTCATCAAATGC+AGG - chr1_2:67102945-67102964 Msa0086370:intron 40.0%
TAAACCCGATTCTCCATATC+AGG + chr1_2:67103106-67103125 None:intergenic 40.0%
AAGCACATACTGTAGTAGCA+AGG - chr1_2:67103128-67103147 Msa0086370:CDS 40.0%
ACAAAGATCGGAAAAGACGA+CGG - chr1_2:67103226-67103245 Msa0086370:CDS 40.0%
TGATTCGCATCAGAGAAGAA+CGG - chr1_2:67103297-67103316 Msa0086370:intron 40.0%
CTAGGTCTAGGTTAAGTTAG+TGG - chr1_2:67103433-67103452 Msa0086370:intron 40.0%
GGGATCTCACTAAAGATAGT+TGG + chr1_2:67103813-67103832 None:intergenic 40.0%
ACGGGATGGTAAAAGAAAAC+AGG + chr1_2:67103919-67103938 None:intergenic 40.0%
! TTTCTTTTACCATCCCGTCT+AGG - chr1_2:67103921-67103940 Msa0086370:intron 40.0%
AATAAGGATATGCCGTAGCA+TGG - chr1_2:67104135-67104154 Msa0086370:intron 40.0%
ATAAGGATATGCCGTAGCAT+GGG - chr1_2:67104136-67104155 Msa0086370:intron 40.0%
AATATCAGATACCTCTGCTC+TGG + chr1_2:67104221-67104240 None:intergenic 40.0%
! ATTGCAATTGCTGTTCGAGA+AGG - chr1_2:67104238-67104257 Msa0086370:intron 40.0%
TCCGATGGAATAATGCTTTC+TGG - chr1_2:67104262-67104281 Msa0086370:intron 40.0%
GAAGAAATATCGGCATCTCA+AGG + chr1_2:67104343-67104362 None:intergenic 40.0%
! AAGACGAATCTAAGGCAAGA+GGG - chr1_2:67104499-67104518 Msa0086370:intron 40.0%
TAATGCACACCGTAGCATTA+CGG - chr1_2:67104587-67104606 Msa0086370:CDS 40.0%
ACTGTTGTCTTCACTAGATC+GGG - chr1_2:67104868-67104887 Msa0086370:CDS 40.0%
TAAGCAACAAGAGAAAGGGA+GGG + chr1_2:67104968-67104987 None:intergenic 40.0%
TTAAGCAACAAGAGAAAGGG+AGG + chr1_2:67104969-67104988 None:intergenic 40.0%
! TTTTTACCCCCCTGTAATAC+AGG - chr1_2:67105299-67105318 Msa0086370:intron 40.0%
AAATGACCTGTATTACAGGG+GGG + chr1_2:67105308-67105327 None:intergenic 40.0%
GAAATGACCTGTATTACAGG+GGG + chr1_2:67105309-67105328 None:intergenic 40.0%
GGAAATGACCTGTATTACAG+GGG + chr1_2:67105310-67105329 None:intergenic 40.0%
CGGAAATGACCTGTATTACA+GGG + chr1_2:67105311-67105330 None:intergenic 40.0%
CCTGTAATACAGGTCATTTC+CGG - chr1_2:67105309-67105328 Msa0086370:intron 40.0%
!! TTTTGTTTGGCCTATTAGGG+GGG + chr1_2:67105449-67105468 None:intergenic 40.0%
!! CGGTTTTTGTTTGGCCTATT+AGG + chr1_2:67105404-67105423 None:intergenic 40.0%
!! TTTTGTTTGGCCTATTAGGG+GGG - chr1_2:67105449-67105468 Msa0086370:CDS 40.0%
CCGGAAATGACCTATATTAC+AGG - chr1_2:67105536-67105555 Msa0086370:CDS 40.0%
TCTTTACCCCCCTGTAATAT+AGG + chr1_2:67105549-67105568 None:intergenic 40.0%
AGGTGTCTGTCCTATTTACA+TGG - chr1_2:67105666-67105685 Msa0086370:intron 40.0%
AGAGACATTCACAAAAGCCT+TGG - chr1_2:67105708-67105727 Msa0086370:intron 40.0%
ATGCATGCGGTAATTAACCA+CGG - chr1_2:67105901-67105920 Msa0086370:CDS 40.0%
CCATTCCATTCTTCTGCATA+TGG + chr1_2:67106115-67106134 None:intergenic 40.0%
CCATATGCAGAAGAATGGAA+TGG - chr1_2:67106112-67106131 Msa0086370:intron 40.0%
TTGCCTTCCACTTTGTACAA+GGG + chr1_2:67106159-67106178 None:intergenic 40.0%
AAAGTGGAAGGCAACCTATA+TGG - chr1_2:67106165-67106184 Msa0086370:CDS 40.0%
CCTGAATATTGTGAGTGGAA+TGG + chr1_2:67106196-67106215 None:intergenic 40.0%
CCATTCCACTCACAATATTC+AGG - chr1_2:67106193-67106212 Msa0086370:CDS 40.0%
GGTATCAACACACCAAAAAG+AGG + chr1_2:67106288-67106307 None:intergenic 40.0%
AATCACATTCAGCCATATCC+CGG - chr1_2:67106490-67106509 Msa0086370:five_prime_UTR 40.0%
AATATAACAGTCCCGGGATA+TGG + chr1_2:67106505-67106524 None:intergenic 40.0%
! ATCGATCGACGAAAGTACAG+TGG - chr1_2:67100760-67100779 Msa0086370:three_prime_UTR 45.0%
GTCGCATTAACGTTGTTGGT+TGG - chr1_2:67100812-67100831 Msa0086370:three_prime_UTR 45.0%
! AACGTTGTTGGTTGGTTGGT+TGG - chr1_2:67100820-67100839 Msa0086370:three_prime_UTR 45.0%
AGAAACGGCGGAGACAAATA+GGG + chr1_2:67100894-67100913 None:intergenic 45.0%
AAGAAACGGCGGAGACAAAT+AGG + chr1_2:67100895-67100914 None:intergenic 45.0%
! TGAGTTGGAGAAAGAAACGG+CGG + chr1_2:67100906-67100925 None:intergenic 45.0%
GATCGAAGAAGGGAATGAGT+TGG + chr1_2:67100921-67100940 None:intergenic 45.0%
TCGTAAGAGGGAGGTTTGAA+TGG + chr1_2:67101021-67101040 None:intergenic 45.0%
GTCATGTGTAGATCCTGAAG+TGG + chr1_2:67101045-67101064 None:intergenic 45.0%
CTTCAGGATCTACACATGAC+AGG - chr1_2:67101045-67101064 Msa0086370:three_prime_UTR 45.0%
!! GTTCTGAAGCAAAGCTTAGG+GGG + chr1_2:67101134-67101153 None:intergenic 45.0%
!! GGTTCTGAAGCAAAGCTTAG+GGG + chr1_2:67101135-67101154 None:intergenic 45.0%
!! GAGGTTCTGAAGCAAAGCTT+AGG + chr1_2:67101137-67101156 None:intergenic 45.0%
! GGACTTTCTTGCATTGATGG+GGG + chr1_2:67101159-67101178 None:intergenic 45.0%
GAATCATCTTCGGGTGATAC+AGG + chr1_2:67101200-67101219 None:intergenic 45.0%
TGAATAGATTGAGGCGGAGT+TGG - chr1_2:67101362-67101381 Msa0086370:intron 45.0%
TGGAATGTGGTCTAAGCCAA+TGG - chr1_2:67101425-67101444 Msa0086370:intron 45.0%
!! ATTTGGAAACTTGCTGAGGC+TGG - chr1_2:67101507-67101526 Msa0086370:intron 45.0%
!!! CTCTGTTTTTTAGGGTCCAG+AGG - chr1_2:67101750-67101769 Msa0086370:intron 45.0%
TTTACTATCCAGAGTGGCGT+TGG - chr1_2:67101829-67101848 Msa0086370:intron 45.0%
CATGCTTCTTGTTGACGGTA+TGG - chr1_2:67101912-67101931 Msa0086370:intron 45.0%
ATATTGTCTGCTGCAAAGGG+GGG - chr1_2:67102056-67102075 Msa0086370:intron 45.0%
CGTTTGTCAATTACGGATCG+AGG - chr1_2:67102114-67102133 Msa0086370:intron 45.0%
AACATTGATCCCAAGGCAGT+GGG - chr1_2:67102284-67102303 Msa0086370:intron 45.0%
AGGTGGTATGATGTCCTTCT+TGG - chr1_2:67102462-67102481 Msa0086370:CDS 45.0%
CTTGGTTAAGTCCAAGACAG+CGG - chr1_2:67102480-67102499 Msa0086370:CDS 45.0%
!! TGTGGCTGTTGATTTGGTTG+GGG - chr1_2:67102673-67102692 Msa0086370:intron 45.0%
!! GTTGATTTGGTTGGGGGTTA+AGG - chr1_2:67102680-67102699 Msa0086370:intron 45.0%
TTCTCCATATCAGGCCAGTT+AGG + chr1_2:67103097-67103116 None:intergenic 45.0%
! ACTGGCCTGATATGGAGAAT+CGG - chr1_2:67103098-67103117 Msa0086370:CDS 45.0%
ACTGTAGTAGCAAGGTTGTC+AGG - chr1_2:67103136-67103155 Msa0086370:CDS 45.0%
ATCTTTGTACCGCTCCAACT+CGG + chr1_2:67103214-67103233 None:intergenic 45.0%
AGTTGGAGCGGTACAAAGAT+CGG - chr1_2:67103214-67103233 Msa0086370:CDS 45.0%
!! TGCTCGTTTGTTGTTTGCTG+CGG - chr1_2:67103368-67103387 Msa0086370:intron 45.0%
TGAAGGAGAAGACTAGGTCT+AGG - chr1_2:67103421-67103440 Msa0086370:intron 45.0%
TCTTGCAACCATAGCCTAGA+CGG + chr1_2:67103938-67103957 None:intergenic 45.0%
ATGGTTGCAAGAGGAGATCT+TGG - chr1_2:67103946-67103965 Msa0086370:intron 45.0%
AAAGCGGAACCTCCTCAATA+GGG + chr1_2:67103981-67104000 None:intergenic 45.0%
AAAAGCGGAACCTCCTCAAT+AGG + chr1_2:67103982-67104001 None:intergenic 45.0%
TCGATAATGCTTGCCAATGC+AGG - chr1_2:67104105-67104124 Msa0086370:intron 45.0%
! TAACGGCTTTTCCCATGCTA+CGG + chr1_2:67104150-67104169 None:intergenic 45.0%
GAAGAAACATCGGCATGTCA+AGG + chr1_2:67104378-67104397 None:intergenic 45.0%
! GAAGACGAATCTAAGGCAAG+AGG - chr1_2:67104498-67104517 Msa0086370:intron 45.0%
ATGCAAACATCTCGCTCATG+TGG + chr1_2:67104810-67104829 None:intergenic 45.0%
CTTCACTAGATCGGGTTTCA+TGG - chr1_2:67104876-67104895 Msa0086370:CDS 45.0%
AAAGCAAATATGGTGCCTGC+AGG + chr1_2:67104925-67104944 None:intergenic 45.0%
AAGCAACAAGAGAAAGGGAG+GGG + chr1_2:67104967-67104986 None:intergenic 45.0%
CCGGAAATGACCTGTATTAC+AGG + chr1_2:67105312-67105331 None:intergenic 45.0%
ATATTAACAGGGGGGGAAAC+CGG + chr1_2:67105331-67105350 None:intergenic 45.0%
AAATTTACGGGGGGGAAAAC+CGG - chr1_2:67105517-67105536 Msa0086370:CDS 45.0%
CCTGCATAGCCACCAAAATT+AGG + chr1_2:67105614-67105633 None:intergenic 45.0%
!! CCTAATTTTGGTGGCTATGC+AGG - chr1_2:67105611-67105630 Msa0086370:intron 45.0%
! TTTGGTGGCTATGCAGGAAA+AGG - chr1_2:67105617-67105636 Msa0086370:intron 45.0%
! TTGGTGGCTATGCAGGAAAA+GGG - chr1_2:67105618-67105637 Msa0086370:intron 45.0%
! GAAAAGGGTACAACAGAGGT+TGG - chr1_2:67105633-67105652 Msa0086370:intron 45.0%
!! CAGAGGTTGGCTTTGTATCA+AGG - chr1_2:67105646-67105665 Msa0086370:intron 45.0%
GAAGTAGCCCTTGTACAAAG+TGG - chr1_2:67106149-67106168 Msa0086370:intron 45.0%
TAGCCCTTGTACAAAGTGGA+AGG - chr1_2:67106153-67106172 Msa0086370:CDS 45.0%
GTTGCCTTCCACTTTGTACA+AGG + chr1_2:67106160-67106179 None:intergenic 45.0%
GTGGAATGGAACCTCCATAT+AGG + chr1_2:67106182-67106201 None:intergenic 45.0%
TCGGACCTGAATATTGTGAG+TGG + chr1_2:67106201-67106220 None:intergenic 45.0%
AATTTGTGGCGGCTACTGTT+CGG + chr1_2:67106220-67106239 None:intergenic 45.0%
AGAGTATATGTAGGCCTCAG+AGG + chr1_2:67106252-67106271 None:intergenic 45.0%
ATCACATTCAGCCATATCCC+GGG - chr1_2:67106491-67106510 Msa0086370:five_prime_UTR 45.0%
!!! ATTATGAATTTATTTTTTTA+AGG - chr1_2:67103627-67103646 Msa0086370:intron 5.0%
!!! TTATGAATTTATTTTTTTAA+GGG - chr1_2:67103628-67103647 Msa0086370:intron 5.0%
!! TAATTGTAAATATAATAATT+TGG - chr1_2:67104039-67104058 Msa0086370:intron 5.0%
!! TAAAAAAAATAATATTAACA+GGG + chr1_2:67105342-67105361 None:intergenic 5.0%
!! ATAAAAAAAATAATATTAAC+AGG + chr1_2:67105343-67105362 None:intergenic 5.0%
!! AATAAAAAAAAAAAATTTAC+GGG - chr1_2:67105505-67105524 Msa0086370:CDS 5.0%
GAGACAAATAGGGAAGAGGG+TGG + chr1_2:67100884-67100903 None:intergenic 50.0%
GCGGAGACAAATAGGGAAGA+GGG + chr1_2:67100887-67100906 None:intergenic 50.0%
TGGTGAAGGGGATCGAAGAA+GGG + chr1_2:67100931-67100950 None:intergenic 50.0%
TTGGTGAAGGGGATCGAAGA+AGG + chr1_2:67100932-67100951 None:intergenic 50.0%
GGAGGTGAAGATTGGTGAAG+GGG + chr1_2:67100943-67100962 None:intergenic 50.0%
GGGAGGTGAAGATTGGTGAA+GGG + chr1_2:67100944-67100963 None:intergenic 50.0%
AGGGAGGTGAAGATTGGTGA+AGG + chr1_2:67100945-67100964 None:intergenic 50.0%
GTAGTAGAGAGAGAGAGGGA+GGG + chr1_2:67100972-67100991 None:intergenic 50.0%
TGTAGTAGAGAGAGAGAGGG+AGG + chr1_2:67100973-67100992 None:intergenic 50.0%
! ATGTCTCAGGTTGCAACCAC+TGG - chr1_2:67100993-67101012 Msa0086370:three_prime_UTR 50.0%
GGAGGTTTGAATGGATCCAG+TGG + chr1_2:67101012-67101031 None:intergenic 50.0%
TCCTGAAGTGGGTCGTAAGA+GGG + chr1_2:67101033-67101052 None:intergenic 50.0%
ATCCTGAAGTGGGTCGTAAG+AGG + chr1_2:67101034-67101053 None:intergenic 50.0%
GGGGGATTGTTAGACTTAGG+TGG + chr1_2:67101116-67101135 None:intergenic 50.0%
! CTTTCTTGCATTGATGGGGG+AGG + chr1_2:67101156-67101175 None:intergenic 50.0%
AGGGACAACTTCAGCAGATG+AGG + chr1_2:67101180-67101199 None:intergenic 50.0%
AAATCCCCACTCCTAACCTC+TGG + chr1_2:67101769-67101788 None:intergenic 50.0%
GGGGACATGCTTCTTGTTGA+CGG - chr1_2:67101907-67101926 Msa0086370:intron 50.0%
CAACATTGATCCCAAGGCAG+TGG - chr1_2:67102283-67102302 Msa0086370:intron 50.0%
ACATTGATCCCAAGGCAGTG+GGG - chr1_2:67102285-67102304 Msa0086370:intron 50.0%
TTTCACGGAATCCGCTGTCT+TGG + chr1_2:67102494-67102513 None:intergenic 50.0%
GCAACACTGCCTTCAATCAC+TGG - chr1_2:67102577-67102596 Msa0086370:intron 50.0%
!! GTGGCTGTTGATTTGGTTGG+GGG - chr1_2:67102674-67102693 Msa0086370:intron 50.0%
CACAGCCTGCATTTGATGAG+TGG + chr1_2:67102953-67102972 None:intergenic 50.0%
CACTCATCAAATGCAGGCTG+TGG - chr1_2:67102951-67102970 Msa0086370:intron 50.0%
! GTTGCCTAACTGGCCTGATA+TGG - chr1_2:67103090-67103109 Msa0086370:CDS 50.0%
CTGGCCTGATATGGAGAATC+GGG - chr1_2:67103099-67103118 Msa0086370:CDS 50.0%
CAGAGAAGAACGGTTTGACC+TGG - chr1_2:67103307-67103326 Msa0086370:intron 50.0%
!! TCGTTTGTTGTTTGCTGCGG+CGG - chr1_2:67103371-67103390 Msa0086370:CDS 50.0%
AGGCGGCTGTGTTATGATGA+AGG - chr1_2:67103404-67103423 Msa0086370:CDS 50.0%
TTACCATCCCGTCTAGGCTA+TGG - chr1_2:67103927-67103946 Msa0086370:intron 50.0%
CTTGCAACCATAGCCTAGAC+GGG + chr1_2:67103937-67103956 None:intergenic 50.0%
GTCTAGGCTATGGTTGCAAG+AGG - chr1_2:67103937-67103956 Msa0086370:intron 50.0%
TGGTGCAGAACTCCCTATTG+AGG - chr1_2:67103966-67103985 Msa0086370:intron 50.0%
TGCAGAACTCCCTATTGAGG+AGG - chr1_2:67103969-67103988 Msa0086370:intron 50.0%
TCAGATACCTCTGCTCTGGT+TGG + chr1_2:67104217-67104236 None:intergenic 50.0%
! CTTTCTGGAGAAACCGCACA+TGG - chr1_2:67104277-67104296 Msa0086370:intron 50.0%
GGCTTCTGTCCGTAATGCTA+CGG + chr1_2:67104599-67104618 None:intergenic 50.0%
! ACAGAAGCCGCTTTACCAAG+TGG - chr1_2:67104610-67104629 Msa0086370:intron 50.0%
! CAGAAGCCGCTTTACCAAGT+GGG - chr1_2:67104611-67104630 Msa0086370:intron 50.0%
CATCTGCCCACTTGGTAAAG+CGG + chr1_2:67104620-67104639 None:intergenic 50.0%
GGGCAGATGCCACCTAATAT+TGG - chr1_2:67104631-67104650 Msa0086370:intron 50.0%
TTGAGCCATTATCGACCTGC+AGG - chr1_2:67104907-67104926 Msa0086370:intron 50.0%
! GCAGGAAAAGGGTACAACAG+AGG - chr1_2:67105629-67105648 Msa0086370:intron 50.0%
GTGGAAGGCAACCTATATGG+AGG - chr1_2:67106168-67106187 Msa0086370:CDS 50.0%
GGAAGAGGGTGGACAAGACA+AGG + chr1_2:67100873-67100892 None:intergenic 55.0%
GGCGGAGACAAATAGGGAAG+AGG + chr1_2:67100888-67100907 None:intergenic 55.0%
TAGAGAGAGAGAGGGAGGGA+GGG + chr1_2:67100968-67100987 None:intergenic 55.0%
TGAAGTGGGTCGTAAGAGGG+AGG + chr1_2:67101030-67101049 None:intergenic 55.0%
TCCCTCTTACGACCCACTTC+AGG - chr1_2:67101029-67101048 Msa0086370:three_prime_UTR 55.0%
TAGGGTCCAGAGGTTAGGAG+TGG - chr1_2:67101760-67101779 Msa0086370:intron 55.0%
AGGGTCCAGAGGTTAGGAGT+GGG - chr1_2:67101761-67101780 Msa0086370:intron 55.0%
GGGGGGAAGTCTCTTTGTCT+CGG - chr1_2:67102073-67102092 Msa0086370:intron 55.0%
CCAATAAGCCCCACTGCCTT+GGG + chr1_2:67102296-67102315 None:intergenic 55.0%
TTTGTACCGCTCCAACTCGG+TGG + chr1_2:67103211-67103230 None:intergenic 55.0%
ACTCTTCGCGCGAAACAACC+AGG + chr1_2:67103328-67103347 None:intergenic 55.0%
! GTTGTTTCGCGCGAAGAGTG+AGG - chr1_2:67103329-67103348 Msa0086370:intron 55.0%
TTTCGCGCGAAGAGTGAGGT+CGG - chr1_2:67103333-67103352 Msa0086370:intron 55.0%
CAACCATAGCCTAGACGGGA+TGG + chr1_2:67103933-67103952 None:intergenic 55.0%
!! TGAGGAGGTTCCGCTTTTGC+AGG - chr1_2:67103984-67104003 Msa0086370:intron 55.0%
GCTGTTCGAGAAGGTTCCGA+TGG - chr1_2:67104247-67104266 Msa0086370:intron 55.0%
TTAGGTGGCATCTGCCCACT+TGG + chr1_2:67104628-67104647 None:intergenic 55.0%
TGGTGCCTGCAGGTCGATAA+TGG + chr1_2:67104915-67104934 None:intergenic 55.0%
GGGGGTTGGATATCTGTGCT+TGG - chr1_2:67105146-67105165 Msa0086370:intron 55.0%
GTGTAAAGGTCGATGGACCG+TGG + chr1_2:67105921-67105940 None:intergenic 55.0%
GGAGGGAGGGAGGTGAAGAT+TGG + chr1_2:67100951-67100970 None:intergenic 60.0%
GTAGAGAGAGAGAGGGAGGG+AGG + chr1_2:67100969-67100988 None:intergenic 60.0%
GGGTCCAGAGGTTAGGAGTG+GGG - chr1_2:67101762-67101781 Msa0086370:intron 60.0%
CAGCAGTTCCAACGCCACTC+TGG + chr1_2:67101840-67101859 None:intergenic 60.0%
CCCAAGGCAGTGGGGCTTAT+TGG - chr1_2:67102293-67102312 Msa0086370:intron 60.0%
GCCAATAAGCCCCACTGCCT+TGG + chr1_2:67102297-67102316 None:intergenic 60.0%
ATGGAGGAGAGCTCGCGTCA+CGG - chr1_2:67102527-67102546 Msa0086370:CDS 60.0%
GTACGATCTCGCACGTCACC+TGG - chr1_2:67103182-67103201 Msa0086370:CDS 60.0%
TCACCTGGTCTCCACCGAGT+TGG - chr1_2:67103197-67103216 Msa0086370:CDS 60.0%
! TGGTCTCCACCGAGTTGGAG+CGG - chr1_2:67103202-67103221 Msa0086370:CDS 60.0%
GGAAAAGACGACGGAGCGTG+CGG - chr1_2:67103235-67103254 Msa0086370:intron 60.0%
!! TTGTTGTTTGCTGCGGCGGC+TGG - chr1_2:67103375-67103394 Msa0086370:CDS 60.0%
ACCTCTGCTCTGGTTGGCGT+GGG + chr1_2:67104211-67104230 None:intergenic 60.0%
TACCTCTGCTCTGGTTGGCG+TGG + chr1_2:67104212-67104231 None:intergenic 60.0%
GAGAGAGAGGGAGGGAGGGA+GGG + chr1_2:67100964-67100983 None:intergenic 65.0%
AGAGAGAGAGGGAGGGAGGG+AGG + chr1_2:67100965-67100984 None:intergenic 65.0%
! GCTCCAACTCGGTGGAGACC+AGG + chr1_2:67103203-67103222 None:intergenic 65.0%
CCTCTGCTCTGGTTGGCGTG+GGG + chr1_2:67104210-67104229 None:intergenic 65.0%
AGAGAGGGAGGGAGGGAGGG+AGG + chr1_2:67100961-67100980 None:intergenic 70.0%
CCCCACGCCAACCAGAGCAG+AGG - chr1_2:67104207-67104226 Msa0086370:intron 70.0%
! GCTGCGGCGGCTGGTTGCAG+AGG - chr1_2:67103384-67103403 Msa0086370:CDS 75.0%
! GCGGCGGCTGGTTGCAGAGG+CGG - chr1_2:67103387-67103406 Msa0086370:CDS 75.0%
! ACGGAGCGTGCGGCGCGCAG+AGG - chr1_2:67103245-67103264 Msa0086370:intron 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 67100741 67106634 67100741 ID=Msa0086370;Name=Msa0086370
chr1_2 mRNA 67100741 67106634 67100741 ID=Msa0086370-mRNA-1;Parent=Msa0086370;Name=Msa0086370-mRNA-1;_AED=0.07;_eAED=0.07;_QI=252|0.90|0.91|1|1|1|12|393|573
chr1_2 exon 67100741 67101253 67100741 ID=Msa0086370-mRNA-1:exon:22698;Parent=Msa0086370-mRNA-1
chr1_2 exon 67101634 67101724 67101634 ID=Msa0086370-mRNA-1:exon:22697;Parent=Msa0086370-mRNA-1
chr1_2 exon 67102422 67102570 67102422 ID=Msa0086370-mRNA-1:exon:22696;Parent=Msa0086370-mRNA-1
chr1_2 exon 67102709 67102811 67102709 ID=Msa0086370-mRNA-1:exon:22695;Parent=Msa0086370-mRNA-1
chr1_2 exon 67103073 67103248 67103073 ID=Msa0086370-mRNA-1:exon:22694;Parent=Msa0086370-mRNA-1
chr1_2 exon 67103370 67103432 67103370 ID=Msa0086370-mRNA-1:exon:22693;Parent=Msa0086370-mRNA-1
chr1_2 exon 67104320 67104408 67104320 ID=Msa0086370-mRNA-1:exon:22692;Parent=Msa0086370-mRNA-1
chr1_2 exon 67104515 67104625 67104515 ID=Msa0086370-mRNA-1:exon:22691;Parent=Msa0086370-mRNA-1
chr1_2 exon 67104777 67104911 67104777 ID=Msa0086370-mRNA-1:exon:22690;Parent=Msa0086370-mRNA-1
chr1_2 exon 67105447 67105612 67105447 ID=Msa0086370-mRNA-1:exon:22689;Parent=Msa0086370-mRNA-1
chr1_2 exon 67105719 67106006 67105719 ID=Msa0086370-mRNA-1:exon:22688;Parent=Msa0086370-mRNA-1
chr1_2 exon 67106152 67106634 67106152 ID=Msa0086370-mRNA-1:exon:22687;Parent=Msa0086370-mRNA-1
chr1_2 five_prime_UTR 67106383 67106634 67106383 ID=Msa0086370-mRNA-1:five_prime_utr;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67106152 67106382 67106152 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67105719 67106006 67105719 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67105447 67105612 67105447 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67104777 67104911 67104777 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67104515 67104625 67104515 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67104320 67104408 67104320 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67103370 67103432 67103370 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67103073 67103248 67103073 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67102709 67102811 67102709 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67102422 67102570 67102422 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67101634 67101724 67101634 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 CDS 67101134 67101253 67101134 ID=Msa0086370-mRNA-1:cds;Parent=Msa0086370-mRNA-1
chr1_2 three_prime_UTR 67100741 67101133 67100741 ID=Msa0086370-mRNA-1:three_prime_utr;Parent=Msa0086370-mRNA-1
Gene Sequence

>Msa0086370

ATGTCTCAGGTTGCAACCACTGGATCCATTCAAACCTCCCTCTTACGACCCACTTCAGGATCTACACATGACAGGTCTCAAACCTTGTTAAAGCCTCCATCTTTTTCCTCCAAAATCTTACCACCTAAGTCTAACAATCCCCCTAAGCTTTGCTTCAGAACCTCCCCCATCAATGCAAGAAAGTCCTCATCTGCTGAAGTTGTCCCTGTATCACCCGAAGATGATTCAAAGATTGAGGCGGAGTTGGAGAAGCTACACGTTTTGCAACAAGTTGGTAATGTTTCTGGTGGAATGTGGTCTAAGCCAATGGTTAGAAGAAAGACTAAGATTGTTTGTACTATTGGTCCTTCTACTAATACAAAGGAAATGATTTGGAAACTTGCTGAGGCTGGAATGAATGTTGCTCGTATGAATATGTCTCATGGTGATCATGCTTCTCATAAGAAAGTTATTGATCTGGTCAAGGAGTATAATGCGCAATCTAAAGATAATGTTATTGCAATTATGCTTGACACCAAGGGTCCAGAGGTTAGGAGTGGGGATTTACCACAACCAATCATGTTAAAAACTGGCCAGGAATTCACTTTTACTATCCAGAGTGGCGTTGGAACTGCTGATTGTGTCAGCGTGAACTATGATGATTTTGTCAATGATGTTGAAGAAGGGGACATGCTTCTTGTTGACGGTGGTATGATGTCCTTCTTGGTTAAGTCCAAGACAGCGGATTCCGTGAAATGTGAAGTTATTGATGGAGGAGAGCTCGCGTCACGGAGACATTTGAATGTTAGAGGAAAGAGTGCAACACTGCCTTCAATCACTGAAAAGGATTGGGATGACATCAAATTTGGAGTCGATAATGAAGTTGATTTCTATGCCGTTTCTTTCGTTAAGGATGCACAAGTAGTTCATGAGCTGAAGAATTATTTGAAAAGCTGTGGTGCTGATATACATGTAATTGTAAAAATTGAAAGTGCAGACTCTATACCGAACTTGCATTCAATTATTACTGCATCTGATGGGGCTATGGTTGCAAGAGGAGATCTTGGTGCAGAACTCCCTATTGAGGAGGTTCCGCTTTTGCAGGAAGAGATAATAAGGATATGCCGTAGCATGGGAAAAGCCGTTATTGTAGCCACAAATATGCTGGAAAGTATGATTGTTCACCCCACGCCAACCAGAGCAGAGGTATCTGATATTGCAATTGCTGTTCGAGAAGGTTCCGATGGAATAATGCTTTCTGGAGAAACCGCACATGGAAAGTTTCCAATTAAAGCTGCGAAAGTAATGCACACCGTAGCATTACGGACAGAAGCCGCTTTACCAAGTGGGCAGATGCCACCTAATATTGGCCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCAACCATGATGTCTAATACTCTTGGAACATCAACTGTTGTCTTCACTAGATCGGGTTTCATGGCTATTCTATTGAGCCATTATCGACCTGCAGGCACCATATTTGCTTTTACTGATCAGTTGGCTTTGTATCAAGGTGTCTGTCCTATTTACATGGAATTCTCTGATGATGCTGAAGAGACATTCACAAAAGCCTTGGATTTGTTGCAGAAGAATGGAATGGTTAAAGAAGGAGAAGAAGTAGCCCTTGTACAAAGTGGAAGGCAACCTATATGGAGGTTCCATTCCACTCACAATATTCAGGTCCGAACAGTAGCCGCCACAAATTAA
Protein sequence

>Msa0086370

MSQVATTGSIQTSLLRPTSGSTHDRSQTLLKPPSFSSKILPPKSNNPPKLCFRTSPINARKSSSAEVVPVSPEDDSKIEAELEKLHVLQQVGNVSGGMWSKPMVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARMNMSHGDHASHKKVIDLVKEYNAQSKDNVIAIMLDTKGPEVRSGDLPQPIMLKTGQEFTFTIQSGVGTADCVSVNYDDFVNDVEEGDMLLVDGGMMSFLVKSKTADSVKCEVIDGGELASRRHLNVRGKSATLPSITEKDWDDIKFGVDNEVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGSDGIMLSGETAHGKFPIKAAKVMHTVALRTEAALPSGQMPPNIGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPAGTIFAFTDQLALYQGVCPIYMEFSDDAEETFTKALDLLQKNGMVKEGEEVALVQSGRQPIWRFHSTHNIQVRTVAATN*