Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0061130 | XP_013466543.1 | 95.568 | 361 | 16 | 0 | 1 | 361 | 1 | 361 | 0.0 | 694 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0061130 | sp|Q9LVI4|TIF6B_ARATH | 34.561 | 353 | 190 | 13 | 1 | 333 | 1 | 332 | 4.50e-36 | 137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0061130 | G8A016 | 95.568 | 361 | 16 | 0 | 1 | 361 | 1 | 361 | 0.0 | 694 |
Gene ID | Type | Classification |
---|---|---|
Msa0061130 | TF | Tify |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0026250 | Msa0061130 | -0.803205 | 3.895575e-49 | -8.615850e-47 |
Msa0046050 | Msa0061130 | 0.810584 | 1.071937e-50 | -8.615850e-47 |
Msa0047560 | Msa0061130 | 0.801243 | 9.872965e-49 | -8.615850e-47 |
Msa0061130 | Msa0064240 | 0.854944 | 8.784860e-62 | -8.615850e-47 |
Msa0061130 | Msa0070580 | 0.824327 | 8.572175e-54 | -8.615850e-47 |
Msa0061130 | Msa0074060 | -0.810494 | 1.120835e-50 | -8.615850e-47 |
Msa0061130 | Msa0077570 | 0.829436 | 5.154709e-55 | -8.615850e-47 |
Msa0061130 | Msa0085690 | 0.812914 | 3.335588e-51 | -8.615850e-47 |
Msa0061130 | Msa0086370 | -0.819809 | 9.553857e-53 | -8.615850e-47 |
Msa0061130 | Msa0089540 | -0.812214 | 4.745571e-51 | -8.615850e-47 |
Msa0061130 | Msa0105680 | 0.960966 | 3.704362e-119 | -8.615850e-47 |
Msa0061130 | Msa0122170 | 0.802488 | 5.478076e-49 | -8.615850e-47 |
Msa0061130 | Msa0130360 | -0.806098 | 9.701200e-50 | -8.615850e-47 |
Msa0061130 | Msa0136090 | -0.801762 | 7.727980e-49 | -8.615850e-47 |
Msa0061130 | Msa0145990 | 0.804433 | 2.165505e-49 | -8.615850e-47 |
Msa0061130 | Msa0152190 | 0.961306 | 1.504766e-119 | -8.615850e-47 |
Msa0061130 | Msa0175210 | 0.806217 | 9.157916e-50 | -8.615850e-47 |
Msa0061130 | Msa0183730 | -0.808530 | 2.960463e-50 | -8.615850e-47 |
Msa0061130 | Msa0185540 | 0.817245 | 3.644158e-52 | -8.615850e-47 |
Msa0061130 | Msa0189250 | 0.807498 | 4.907850e-50 | -8.615850e-47 |
Msa0061130 | Msa0206370 | -0.802937 | 4.426549e-49 | -8.615850e-47 |
Msa0061130 | Msa0213590 | 0.803566 | 3.278919e-49 | -8.615850e-47 |
Msa0061130 | Msa0219840 | -0.807078 | 6.025966e-50 | -8.615850e-47 |
Msa0061130 | Msa0221180 | -0.839004 | 2.053788e-57 | -8.615850e-47 |
Msa0061130 | Msa0221460 | 0.802293 | 6.009547e-49 | -8.615850e-47 |
Msa0061130 | Msa0238960 | 0.809317 | 2.008761e-50 | -8.615850e-47 |
Msa0061130 | Msa0259570 | 0.802821 | 4.677688e-49 | -8.615850e-47 |
Msa0061130 | Msa0262750 | -0.819507 | 1.119936e-52 | -8.615850e-47 |
Msa0061130 | Msa0267450 | 0.804784 | 1.829186e-49 | -8.615850e-47 |
Msa0061130 | Msa0267510 | 0.800716 | 1.264805e-48 | -8.615850e-47 |
Msa0061130 | Msa0269220 | 0.818389 | 2.011072e-52 | -8.615850e-47 |
Msa0061130 | Msa0270830 | 0.816958 | 4.227875e-52 | -8.615850e-47 |
Msa0061130 | Msa0300470 | -0.830831 | 2.353070e-55 | -8.615850e-47 |
Msa0061130 | Msa0305630 | 0.812851 | 3.443247e-51 | -8.615850e-47 |
Msa0061130 | Msa0316720 | 0.807532 | 4.827003e-50 | -8.615850e-47 |
Msa0061130 | Msa0336430 | -0.851504 | 8.501029e-61 | -8.615850e-47 |
Msa0061130 | Msa0336460 | -0.828676 | 7.873658e-55 | -8.615850e-47 |
Msa0061130 | Msa0336520 | -0.842035 | 3.306165e-58 | -8.615850e-47 |
Msa0061130 | Msa0337970 | -0.816461 | 5.465945e-52 | -8.615850e-47 |
Msa0061130 | Msa0369580 | 0.850130 | 2.072147e-60 | -8.615850e-47 |
Msa0061130 | Msa0371350 | 0.836150 | 1.107814e-56 | -8.615850e-47 |
Msa0061130 | Msa0388250 | -0.803282 | 3.755901e-49 | -8.615850e-47 |
Msa0061130 | Msa0417000 | 0.839694 | 1.359582e-57 | -8.615850e-47 |
Msa0061130 | Msa0419420 | 0.824152 | 9.425285e-54 | -8.615850e-47 |
Msa0061130 | Msa0424940 | 0.805614 | 1.226004e-49 | -8.615850e-47 |
Msa0061130 | Msa0430040 | 0.822862 | 1.887113e-53 | -8.615850e-47 |
Msa0061130 | Msa0440720 | 0.803859 | 2.850602e-49 | -8.615850e-47 |
Msa0061130 | Msa0463820 | 0.851797 | 7.021714e-61 | -8.615850e-47 |
Msa0061130 | Msa0472300 | 0.815405 | 9.401308e-52 | -8.615850e-47 |
Msa0061130 | Msa0476140 | 0.819362 | 1.208561e-52 | -8.615850e-47 |
Msa0061130 | Msa0479890 | 0.803324 | 3.680988e-49 | -8.615850e-47 |
Msa0061130 | Msa0484590 | 0.808993 | 2.356579e-50 | -8.615850e-47 |
Msa0061130 | Msa0490200 | 0.812872 | 3.406263e-51 | -8.615850e-47 |
Msa0061130 | Msa0523600 | 0.803024 | 4.246724e-49 | -8.615850e-47 |
Msa0061130 | Msa0530660 | -0.803608 | 3.213990e-49 | -8.615850e-47 |
Msa0061130 | Msa0541880 | -0.885357 | 8.719068e-72 | -8.615850e-47 |
Msa0061130 | Msa0541940 | -0.880722 | 4.344872e-70 | -8.615850e-47 |
Msa0061130 | Msa0568460 | 0.821117 | 4.788440e-53 | -8.615850e-47 |
Msa0061130 | Msa0587180 | -0.821690 | 3.530030e-53 | -8.615850e-47 |
Msa0061130 | Msa0598470 | 0.822022 | 2.958684e-53 | -8.615850e-47 |
Msa0061130 | Msa0603600 | 0.827937 | 1.187418e-54 | -8.615850e-47 |
Msa0061130 | Msa0605520 | -0.829444 | 5.131701e-55 | -8.615850e-47 |
Msa0061130 | Msa0612880 | 0.814929 | 1.199612e-51 | -8.615850e-47 |
Msa0061130 | Msa0627360 | -0.805568 | 1.253884e-49 | -8.615850e-47 |
Msa0061130 | Msa0638300 | 0.800159 | 1.642375e-48 | -8.615850e-47 |
Msa0061130 | Msa0656910 | 0.812685 | 3.744476e-51 | -8.615850e-47 |
Msa0061130 | Msa0660090 | -0.800714 | 1.265806e-48 | -8.615850e-47 |
Msa0061130 | Msa0660260 | -0.816508 | 5.332726e-52 | -8.615850e-47 |
Msa0061130 | Msa0673940 | -0.814748 | 1.315294e-51 | -8.615850e-47 |
Msa0061130 | Msa0677250 | 0.806498 | 7.990526e-50 | -8.615850e-47 |
Msa0061130 | Msa0685390 | 0.823451 | 1.375746e-53 | -8.615850e-47 |
Msa0061130 | Msa0685610 | -0.879251 | 1.451571e-69 | -8.615850e-47 |
Msa0061130 | Msa0688620 | -0.815363 | 9.604789e-52 | -8.615850e-47 |
Msa0061130 | Msa0702500 | -0.800112 | 1.679417e-48 | -8.615850e-47 |
Msa0061130 | Msa0708020 | -0.809231 | 2.096158e-50 | -8.615850e-47 |
Msa0061130 | Msa0714230 | 0.836013 | 1.199838e-56 | -8.615850e-47 |
Msa0061130 | Msa0749190 | -0.816344 | 5.804916e-52 | -8.615850e-47 |
Msa0061130 | Msa0750200 | 0.807037 | 6.145707e-50 | -8.615850e-47 |
Msa0061130 | Msa0750520 | -0.815984 | 6.984487e-52 | -8.615850e-47 |
Msa0061130 | Msa0755480 | 0.802239 | 6.165805e-49 | -8.615850e-47 |
Msa0061130 | Msa0766910 | 0.806767 | 7.011781e-50 | -8.615850e-47 |
Msa0061130 | Msa0790650 | 0.815910 | 7.255622e-52 | -8.615850e-47 |
Msa0061130 | Msa0822680 | 0.803285 | 3.749960e-49 | -8.615850e-47 |
Msa0061130 | Msa0827340 | 0.806199 | 9.239321e-50 | -8.615850e-47 |
Msa0061130 | Msa0840540 | -0.811188 | 7.933030e-51 | -8.615850e-47 |
Msa0061130 | Msa0856220 | -0.801457 | 8.923162e-49 | -8.615850e-47 |
Msa0061130 | Msa0930950 | 0.831693 | 1.444116e-55 | -8.615850e-47 |
Msa0061130 | Msa0941150 | 0.812118 | 4.978152e-51 | -8.615850e-47 |
Msa0061130 | Msa0978980 | -0.829784 | 4.241443e-55 | -8.615850e-47 |
Msa0061130 | Msa1008850 | -0.826044 | 3.366339e-54 | -8.615850e-47 |
Msa0061130 | Msa1027160 | -0.841523 | 4.513408e-58 | -8.615850e-47 |
Msa0061130 | Msa1038860 | -0.805567 | 1.254341e-49 | -8.615850e-47 |
Msa0061130 | Msa1044520 | 0.802843 | 4.627532e-49 | -8.615850e-47 |
Msa0061130 | Msa1057620 | 0.803520 | 3.352694e-49 | -8.615850e-47 |
Msa0061130 | Msa1071410 | -0.818676 | 1.731043e-52 | -8.615850e-47 |
Msa0061130 | Msa1082640 | 0.816604 | 5.075840e-52 | -8.615850e-47 |
Msa0061130 | Msa1136970 | 0.813886 | 2.039394e-51 | -8.615850e-47 |
Msa0061130 | Msa1138800 | -0.815512 | 8.900518e-52 | -8.615850e-47 |
Msa0061130 | Msa1144990 | -0.811951 | 5.414745e-51 | -8.615850e-47 |
Msa0061130 | Msa1154630 | -0.880982 | 3.502673e-70 | -8.615850e-47 |
Msa0061130 | Msa1156430 | 0.810004 | 1.429769e-50 | -8.615850e-47 |
Msa0061130 | Msa1191530 | 0.810012 | 1.424201e-50 | -8.615850e-47 |
Msa0061130 | Msa1202220 | 0.841213 | 5.446718e-58 | -8.615850e-47 |
Msa0061130 | Msa1204870 | 0.804813 | 1.803879e-49 | -8.615850e-47 |
Msa0061130 | Msa1204900 | 0.801355 | 9.364853e-49 | -8.615850e-47 |
Msa0061130 | Msa1206040 | -0.820554 | 6.450291e-53 | -8.615850e-47 |
Msa0061130 | Msa1220720 | -0.807683 | 4.484763e-50 | -8.615850e-47 |
Msa0061130 | Msa1223440 | -0.818104 | 2.332354e-52 | -8.615850e-47 |
Msa0061130 | Msa1255030 | 0.815526 | 8.836571e-52 | -8.615850e-47 |
Msa0061130 | Msa1256490 | 0.801724 | 7.867805e-49 | -8.615850e-47 |
Msa0061130 | Msa1265570 | -0.812227 | 4.714507e-51 | -8.615850e-47 |
Msa0061130 | Msa1266120 | 0.801227 | 9.943526e-49 | -8.615850e-47 |
Msa0061130 | Msa1273320 | -0.800646 | 1.307346e-48 | -8.615850e-47 |
Msa0061130 | Msa1288970 | 0.809443 | 1.887585e-50 | -8.615850e-47 |
Msa0061130 | Msa1290090 | 0.807969 | 3.897692e-50 | -8.615850e-47 |
Msa0061130 | Msa1296810 | 0.800385 | 1.477555e-48 | -8.615850e-47 |
Msa0061130 | Msa1297070 | -0.833054 | 6.647534e-56 | -8.615850e-47 |
Msa0061130 | Msa1308850 | -0.802663 | 5.040762e-49 | -8.615850e-47 |
Msa0061130 | Msa1328870 | -0.814379 | 1.587455e-51 | -8.615850e-47 |
Msa0061130 | Msa1334350 | 0.801500 | 8.746394e-49 | -8.615850e-47 |
Msa0061130 | Msa1334670 | -0.810335 | 1.213124e-50 | -8.615850e-47 |
Msa0061130 | Msa1343460 | -0.811651 | 6.293175e-51 | -8.615850e-47 |
Msa0061130 | Msa1349850 | 0.832840 | 7.512643e-56 | -8.615850e-47 |
Msa0061130 | Msa1362590 | -0.813034 | 3.140138e-51 | -8.615850e-47 |
Msa0061130 | Msa1365230 | -0.808736 | 2.674983e-50 | -8.615850e-47 |
Msa0061130 | Msa1366140 | 0.840579 | 7.986109e-58 | -8.615850e-47 |
Msa0061130 | Msa1369390 | 0.800722 | 1.261165e-48 | -8.615850e-47 |
Msa0061130 | Msa1371270 | -0.808185 | 3.506427e-50 | -8.615850e-47 |
Msa0061130 | Msa1371800 | -0.808245 | 3.404704e-50 | -8.615850e-47 |
Msa0061130 | Msa1372030 | -0.819688 | 1.018354e-52 | -8.615850e-47 |
Msa0061130 | Msa1376310 | -0.803516 | 3.358533e-49 | -8.615850e-47 |
Msa0061130 | Msa1381060 | 0.802607 | 5.176745e-49 | -8.615850e-47 |
Msa0061130 | Msa1381800 | -0.817924 | 2.561900e-52 | -8.615850e-47 |
Msa0061130 | Msa1387100 | 0.822711 | 2.046379e-53 | -8.615850e-47 |
Msa0061130 | Msa1387450 | 0.854701 | 1.032620e-61 | -8.615850e-47 |
Msa0061130 | Msa1414000 | 0.812673 | 3.766986e-51 | -8.615850e-47 |
Msa0061130 | Msa1422820 | 0.806092 | 9.729428e-50 | -8.615850e-47 |
Msa0061130 | Msa1427600 | 0.835009 | 2.153626e-56 | -8.615850e-47 |
Msa0061130 | Msa1430630 | 0.800699 | 1.275274e-48 | -8.615850e-47 |
Msa0061130 | Msa1436640 | -0.805171 | 1.518701e-49 | -8.615850e-47 |
Msa0061130 | Msa1438510 | -0.841288 | 5.204498e-58 | -8.615850e-47 |
Msa0061130 | Msa1439000 | 0.819217 | 1.303988e-52 | -8.615850e-47 |
Msa0061130 | Msa1453540 | 0.803966 | 2.708806e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0061130 | MtrunA17_Chr1g0161031 | 95.568 | 361 | 16 | 0 | 1 | 361 | 1 | 361 | 0.0 | 694 |
Msa0061130 | MtrunA17_Chr6g0478581 | 30.952 | 420 | 180 | 15 | 1 | 336 | 1 | 394 | 2.01e-33 | 128 |
Msa0061130 | MtrunA17_Chr2g0301131 | 30.061 | 163 | 82 | 3 | 172 | 334 | 110 | 240 | 3.47e-14 | 71.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0061130 | AT3G17860.1 | 34.561 | 353 | 190 | 13 | 1 | 333 | 1 | 332 | 4.58e-37 | 137 |
Msa0061130 | AT3G17860.3 | 33.750 | 320 | 172 | 11 | 33 | 333 | 1 | 299 | 2.04e-32 | 124 |
Msa0061130 | AT3G17860.4 | 33.750 | 320 | 172 | 11 | 33 | 333 | 1 | 299 | 2.04e-32 | 124 |
Msa0061130 | AT3G17860.2 | 33.750 | 320 | 172 | 11 | 33 | 333 | 21 | 319 | 6.04e-32 | 123 |
Msa0061130 | AT1G70700.1 | 31.564 | 358 | 148 | 14 | 1 | 352 | 1 | 267 | 2.93e-28 | 111 |
Msa0061130 | AT1G70700.2 | 30.447 | 358 | 128 | 12 | 1 | 352 | 1 | 243 | 2.45e-27 | 108 |
Msa0061130 | AT1G48500.1 | 30.357 | 336 | 184 | 9 | 1 | 333 | 1 | 289 | 2.18e-25 | 104 |
Msa0061130 | AT1G70700.3 | 30.982 | 326 | 130 | 13 | 1 | 320 | 1 | 237 | 6.52e-24 | 100 |
Msa0061130 | AT1G48500.2 | 30.556 | 324 | 173 | 10 | 1 | 320 | 1 | 276 | 1.16e-21 | 93.6 |
Msa0061130 | AT1G48500.3 | 38.587 | 184 | 85 | 6 | 140 | 320 | 88 | 246 | 4.99e-18 | 82.8 |
Find 120 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCTCGGTTTCTTCAAATTA+TGG | 0.144945 | 1_2:-19142699 | Msa0061130:exon |
CTCTGTTAGGAGGATATATT+TGG | 0.169181 | 1_2:-19138771 | Msa0061130:three_prime_UTR |
TTGAAAAGTAAACTCTTATT+AGG | 0.200819 | 1_2:-19138674 | Msa0061130:three_prime_UTR |
AAGTAGCAGTGATGAGTTTA+TGG | 0.220743 | 1_2:-19140310 | Msa0061130:CDS |
CGAATGTTTCAGCAGTAAAA+TGG | 0.266336 | 1_2:-19141936 | Msa0061130:CDS |
GCAAGCTATGTTCTTCATAT+TGG | 0.289077 | 1_2:+19142801 | None:intergenic |
GATTTCTTGTTGAGGTTATA+TGG | 0.291399 | 1_2:+19139235 | None:intergenic |
TGATATTCTAAAGATATTTC+AGG | 0.304355 | 1_2:+19138649 | None:intergenic |
ATGTCTACAGGTGGACTTAT+AGG | 0.310065 | 1_2:+19140405 | None:intergenic |
GAGCTAGATGCCTGAACTTC+AGG | 0.316257 | 1_2:+19140456 | None:intergenic |
CCGATCGTTGGTACTGTTGC+TGG | 0.321376 | 1_2:-19141187 | Msa0061130:CDS |
TAATTCAAACCAAACCAAAC+TGG | 0.339436 | 1_2:-19142734 | Msa0061130:five_prime_UTR |
AGAAAGTGAATTTGCTTGAT+TGG | 0.344513 | 1_2:+19141327 | None:intergenic |
CCCCACAACAAATTATTTAA+GGG | 0.355484 | 1_2:+19138964 | None:intergenic |
CGTTGGTACTGTTGCTGGTT+TGG | 0.366943 | 1_2:-19141182 | Msa0061130:CDS |
GAATCCAACCACTTAATATA+AGG | 0.369010 | 1_2:+19138934 | None:intergenic |
TTATCTGTTTCTTCACATAC+TGG | 0.372825 | 1_2:-19140354 | Msa0061130:CDS |
TCGAGCCAATGATGCTTTGC+GGG | 0.375285 | 1_2:+19140029 | None:intergenic |
GCTTATCTGCAGCTTCAAAC+AGG | 0.376253 | 1_2:-19140485 | Msa0061130:CDS |
GAATTTGCTTGATTGGAAAC+TGG | 0.385359 | 1_2:+19141334 | None:intergenic |
AATGTATATATATCTGATCT+TGG | 0.386452 | 1_2:+19138823 | None:intergenic |
AAAAGTTTCTGAAGACGATA+AGG | 0.391540 | 1_2:-19141869 | Msa0061130:CDS |
AAACCAATGAAAACCCAGTT+TGG | 0.408196 | 1_2:+19142720 | None:intergenic |
GACCCTTCATTGTTAATCTC+AGG | 0.410284 | 1_2:+19142638 | None:intergenic |
TGTTTCTTTCATACGTTGTT+GGG | 0.412136 | 1_2:-19142829 | None:intergenic |
AAGGCTAAAATGATATCTTC+TGG | 0.412380 | 1_2:-19141850 | Msa0061130:CDS |
AGAAAATAGGGATGTGGTTG+AGG | 0.413306 | 1_2:-19138737 | Msa0061130:three_prime_UTR |
CAGGGCTCAACCTGAAGTTC+AGG | 0.416821 | 1_2:-19140466 | Msa0061130:CDS |
CATATGTATGTTTGATACAT+AGG | 0.419348 | 1_2:-19138996 | Msa0061130:three_prime_UTR |
AATGAAAACCCAGTTTGGTT+TGG | 0.423478 | 1_2:+19142725 | None:intergenic |
ATGTTAGCACCTATTGAATT+CGG | 0.423665 | 1_2:+19139196 | None:intergenic |
GTGGTTGCATTGACTACTTT+GGG | 0.425771 | 1_2:+19140231 | None:intergenic |
GGGTCTTACCTTATATTAAG+TGG | 0.426315 | 1_2:-19138942 | Msa0061130:three_prime_UTR |
GATATCTTCTGGTTTCATAC+AGG | 0.429332 | 1_2:-19141839 | Msa0061130:intron |
GCAGGCCCGCAAAGCATCAT+TGG | 0.432249 | 1_2:-19140034 | Msa0061130:CDS |
TCCCTTAAATAATTTGTTGT+GGG | 0.442794 | 1_2:-19138965 | Msa0061130:three_prime_UTR |
GCACAAATGCCGAATTCAAT+AGG | 0.448545 | 1_2:-19139205 | Msa0061130:CDS |
GGTGGTTGCATTGACTACTT+TGG | 0.451731 | 1_2:+19140230 | None:intergenic |
AAATTCACATTGTGTTGTAC+AGG | 0.451805 | 1_2:+19141388 | None:intergenic |
GTGTTTCTTTCATACGTTGT+TGG | 0.454615 | 1_2:-19142830 | None:intergenic |
GAGTAACTCCTTCTTATAGA+AGG | 0.456364 | 1_2:-19139120 | Msa0061130:three_prime_UTR |
GGCACAAGCCATCATGTTGT+TGG | 0.459085 | 1_2:-19140517 | Msa0061130:CDS |
AAACTTACCTCATTGCTTGG+TGG | 0.467237 | 1_2:-19138704 | Msa0061130:three_prime_UTR |
AAAAGTAGGATATCTCTGTT+AGG | 0.469099 | 1_2:-19138784 | Msa0061130:three_prime_UTR |
AGGACTTGAAATACCAGAGC+AGG | 0.472355 | 1_2:+19140377 | None:intergenic |
CTGCTACTTGAGCCACTCCC+TGG | 0.474711 | 1_2:+19140324 | None:intergenic |
GCTATGTTCTTCATATTGGC+TGG | 0.476030 | 1_2:+19142805 | None:intergenic |
AGCAGAGACTTTGTTCAAGA+AGG | 0.476877 | 1_2:+19141912 | None:intergenic |
TGTTATCCTTGGTTTGCTAC+CGG | 0.481772 | 1_2:+19139145 | None:intergenic |
CCTTAAATAATTTGTTGTGG+GGG | 0.484319 | 1_2:-19138963 | Msa0061130:three_prime_UTR |
TTCCCTTAAATAATTTGTTG+TGG | 0.487035 | 1_2:-19138966 | Msa0061130:three_prime_UTR |
CTTACCTTATATTAAGTGGT+TGG | 0.487092 | 1_2:-19138938 | Msa0061130:three_prime_UTR |
TCACATACTGGTCCACAGCC+AGG | 0.488582 | 1_2:-19140342 | Msa0061130:CDS |
CTATGCTAATGCTATACTGT+TGG | 0.490640 | 1_2:+19138900 | None:intergenic |
TCTTTGTTAAACCAAACAAA+AGG | 0.492343 | 1_2:+19142774 | None:intergenic |
CAAGCAGATGTGGTAGGAGT+AGG | 0.492652 | 1_2:+19140267 | None:intergenic |
CTTAAATAATTTGTTGTGGG+GGG | 0.493779 | 1_2:-19138962 | Msa0061130:three_prime_UTR |
CTTGAGCCACTCCCTGGCTG+TGG | 0.494035 | 1_2:+19140330 | None:intergenic |
GTATGTGAAGAAACAGATAA+AGG | 0.494684 | 1_2:+19140357 | None:intergenic |
ATCATGTTGTTGGCTGGAAG+TGG | 0.494803 | 1_2:-19140507 | Msa0061130:CDS |
ATCGAGCCAATGATGCTTTG+CGG | 0.499003 | 1_2:+19140028 | None:intergenic |
GAAAATAGGGATGTGGTTGA+GGG | 0.501278 | 1_2:-19138736 | Msa0061130:three_prime_UTR |
CAAGCCATCATGTTGTTGGC+TGG | 0.503763 | 1_2:-19140513 | Msa0061130:CDS |
TTGAAACTTACCTCATTGCT+TGG | 0.503780 | 1_2:-19138707 | Msa0061130:three_prime_UTR |
AATGCGAAGCAATCACTACT+TGG | 0.504587 | 1_2:-19141244 | Msa0061130:CDS |
GAGTTACTCATTGTTATCCT+TGG | 0.505605 | 1_2:+19139134 | None:intergenic |
CCCTTAAATAATTTGTTGTG+GGG | 0.508409 | 1_2:-19138964 | Msa0061130:three_prime_UTR |
TGTCAGATTTAGTTACATAA+CGG | 0.513985 | 1_2:+19138876 | None:intergenic |
ATTTAAAGAAAATAGGGATG+TGG | 0.514631 | 1_2:-19138743 | Msa0061130:three_prime_UTR |
TAGAAGGAGACTACATAAGA+TGG | 0.514753 | 1_2:-19139104 | Msa0061130:three_prime_UTR |
GCAACCACCATGGTTCCATC+AGG | 0.516533 | 1_2:-19140216 | Msa0061130:intron |
CATCCTCAGATTTCTTGTTG+AGG | 0.517588 | 1_2:+19139227 | None:intergenic |
TGTAGTCTCCTTCTATAAGA+AGG | 0.520559 | 1_2:+19139112 | None:intergenic |
AACATGGTAAGTTGAGGAGC+AGG | 0.523147 | 1_2:+19141042 | None:intergenic |
TCACCTGAGATTAACAATGA+AGG | 0.525032 | 1_2:-19142641 | Msa0061130:CDS |
AATTCAAACCAAACCAAACT+GGG | 0.526934 | 1_2:-19142733 | Msa0061130:five_prime_UTR |
AAATTCGCATCAGGTGATGA+TGG | 0.528192 | 1_2:-19140432 | Msa0061130:CDS |
GAGCAGGGTGGTATGTCTAC+AGG | 0.528533 | 1_2:+19140393 | None:intergenic |
CACTAGTTTGCAAGCAGATG+TGG | 0.530296 | 1_2:+19140257 | None:intergenic |
GCAGAGACTTTGTTCAAGAA+GGG | 0.533315 | 1_2:+19141913 | None:intergenic |
CATTCAGTTCTTCCGATCGT+TGG | 0.534965 | 1_2:-19141199 | Msa0061130:CDS |
TCTAGCTCGAAATTCGCATC+AGG | 0.536374 | 1_2:-19140441 | Msa0061130:CDS |
CACTAGTACTGCTAATATGC+CGG | 0.542872 | 1_2:-19139164 | Msa0061130:CDS |
AGTTGAGGAGCAGGTGCAGA+TGG | 0.548573 | 1_2:+19141051 | None:intergenic |
GTAGACATACCACCCTGCTC+TGG | 0.550254 | 1_2:-19140390 | Msa0061130:CDS |
CACAGTACCGCCATAAAACA+TGG | 0.558159 | 1_2:+19141026 | None:intergenic |
AAGCAGATGTGGTAGGAGTA+GGG | 0.560739 | 1_2:+19140268 | None:intergenic |
GCGAAGCAATCACTACTTGG+TGG | 0.562781 | 1_2:-19141241 | Msa0061130:CDS |
TGTATGTTTGATACATAGGT+AGG | 0.563499 | 1_2:-19138992 | Msa0061130:three_prime_UTR |
AATGATGCTTTGCGGGCCTG+CGG | 0.566874 | 1_2:+19140036 | None:intergenic |
CACCTGAGATTAACAATGAA+GGG | 0.567172 | 1_2:-19142640 | Msa0061130:CDS |
CAATGATATCACTCCTGAGA+AGG | 0.574823 | 1_2:-19140995 | Msa0061130:intron |
ACTGGTCCACAGCCAGGGAG+TGG | 0.579269 | 1_2:-19140336 | Msa0061130:CDS |
ATTAGCAGTACTAGTGGTCG+CGG | 0.581937 | 1_2:+19139171 | None:intergenic |
CACATACTGGTCCACAGCCA+GGG | 0.588678 | 1_2:-19140341 | Msa0061130:CDS |
CTTATCTGCAGCTTCAAACA+GGG | 0.597255 | 1_2:-19140484 | Msa0061130:CDS |
TCAAGCAAATTCACTTTCTG+CGG | 0.601727 | 1_2:-19141323 | Msa0061130:CDS |
ACTTCCAGCCAACAACATGA+TGG | 0.615633 | 1_2:+19140509 | None:intergenic |
CGGCATATTAGCAGTACTAG+TGG | 0.617445 | 1_2:+19139165 | None:intergenic |
ATACATATGAATCTCAGCAT+AGG | 0.627487 | 1_2:+19139010 | None:intergenic |
AGTAGGATATCTCTGTTAGG+AGG | 0.627796 | 1_2:-19138781 | Msa0061130:three_prime_UTR |
TAGAACTCTTTCAAACACGA+TGG | 0.630111 | 1_2:-19141445 | Msa0061130:CDS |
TCTTTCAAACACGATGGACA+AGG | 0.634289 | 1_2:-19141439 | Msa0061130:CDS |
GGACTTGAAATACCAGAGCA+GGG | 0.635730 | 1_2:+19140378 | None:intergenic |
CCAGCAACAGTACCAACGAT+CGG | 0.636094 | 1_2:+19141187 | None:intergenic |
CCATAAAACATGGTAAGTTG+AGG | 0.638856 | 1_2:+19141036 | None:intergenic |
ATGGCTGCTAAAACATCTAG+AGG | 0.639805 | 1_2:-19140291 | Msa0061130:CDS |
ACGATCGGAAGAACTGAATG+AGG | 0.643920 | 1_2:+19141202 | None:intergenic |
CAGGGTGGTATGTCTACAGG+TGG | 0.644694 | 1_2:+19140396 | None:intergenic |
TTGCTGGTTTGGTTGAACCA+TGG | 0.654058 | 1_2:-19141171 | Msa0061130:intron |
TAACCTCAACAAGAAATCTG+AGG | 0.657118 | 1_2:-19139230 | Msa0061130:CDS |
ACTAAAACCACCAAGCAATG+AGG | 0.661025 | 1_2:+19138697 | None:intergenic |
AGTTTGCAAGCAGATGTGGT+AGG | 0.665629 | 1_2:+19140261 | None:intergenic |
TTACATACCTGATGGAACCA+TGG | 0.681302 | 1_2:+19140209 | None:intergenic |
AATATGCCGGTAGCAAACCA+AGG | 0.684244 | 1_2:-19139151 | Msa0061130:CDS |
AGTAGTCAATGCAACCACCA+TGG | 0.687562 | 1_2:-19140226 | Msa0061130:CDS |
TTCAAACACGATGGACAAGG+TGG | 0.707235 | 1_2:-19141436 | Msa0061130:CDS |
ACTGAATGAGGTGCTGTAAG+CGG | 0.719108 | 1_2:+19141214 | None:intergenic |
CTTGAAATACCAGAGCAGGG+TGG | 0.775660 | 1_2:+19140381 | None:intergenic |
CATACCTGATGGAACCATGG+TGG | 0.816498 | 1_2:+19140212 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GATTTTATTTAAAGAAAATA+GGG | - | chr1_2:19142710-19142729 | Msa0061130:five_prime_UTR | 10.0% |
!!! | TTCTTTGCTTTTTTTTTTTT+TGG | - | chr1_2:19138861-19138880 | Msa0061130:three_prime_UTR | 15.0% |
!! | ATACTTATATAGATGTAAAA+AGG | - | chr1_2:19139050-19139069 | Msa0061130:three_prime_UTR | 15.0% |
!!! | TTAATTATAGAAGTCTTTTT+AGG | - | chr1_2:19139836-19139855 | Msa0061130:intron | 15.0% |
!!! | ATTCATATGAAATTGATTTT+CGG | - | chr1_2:19139864-19139883 | Msa0061130:intron | 15.0% |
!!! | CCTATATTTATTATAACTTT+TGG | + | chr1_2:19141327-19141346 | None:intergenic | 15.0% |
!! | CCAAAAGTTATAATAAATAT+AGG | - | chr1_2:19141324-19141343 | Msa0061130:CDS | 15.0% |
!! | AATTATAAGATGTATATTCA+TGG | - | chr1_2:19142014-19142033 | Msa0061130:intron | 15.0% |
!!! | TGTATAAAATTATTTTGGAA+GGG | + | chr1_2:19142126-19142145 | None:intergenic | 15.0% |
!!! | ATGTATAAAATTATTTTGGA+AGG | + | chr1_2:19142127-19142146 | None:intergenic | 15.0% |
!!! | CTAGATGTATAAAATTATTT+TGG | + | chr1_2:19142131-19142150 | None:intergenic | 15.0% |
!!! | TATTTAGTTTTTACAAAAGT+AGG | - | chr1_2:19142661-19142680 | Msa0061130:CDS | 15.0% |
!!! | GGATTTTATTTAAAGAAAAT+AGG | - | chr1_2:19142709-19142728 | Msa0061130:five_prime_UTR | 15.0% |
!!! | AATTCTTTGAGCTTTAATTT+TGG | - | chr1_2:19138884-19138903 | Msa0061130:three_prime_UTR | 20.0% |
!! | TGCACCAAATTAATTATTAA+AGG | - | chr1_2:19139133-19139152 | Msa0061130:exon | 20.0% |
!! | GCACCAAATTAATTATTAAA+GGG | - | chr1_2:19139134-19139153 | Msa0061130:exon | 20.0% |
!! | ACACCCTTTAATAATTAATT+TGG | + | chr1_2:19139140-19139159 | None:intergenic | 20.0% |
!! | AATGTTAATAATTAGTTGTC+AGG | + | chr1_2:19139410-19139429 | None:intergenic | 20.0% |
!! | TGTTAAAAAATTGTGAAGTT+AGG | - | chr1_2:19139677-19139696 | Msa0061130:intron | 20.0% |
!! | TAAAACAAATTCACATTTAG+AGG | - | chr1_2:19139747-19139766 | Msa0061130:intron | 20.0% |
!! | AAAACAAATTCACATTTAGA+GGG | - | chr1_2:19139748-19139767 | Msa0061130:intron | 20.0% |
!! | AAACATCCTAAAATTATGTT+CGG | + | chr1_2:19139892-19139911 | None:intergenic | 20.0% |
!!! | AAGTTACAAGATGATTTTTT+AGG | + | chr1_2:19140172-19140191 | None:intergenic | 20.0% |
!!! | AAAAATCATCTTGTAACTTT+TGG | - | chr1_2:19140173-19140192 | Msa0061130:intron | 20.0% |
!! | CCTAAAAAATCTTTATAAGT+GGG | - | chr1_2:19141632-19141651 | Msa0061130:intron | 20.0% |
!!! | ATACATCTTATAATTTGTGT+TGG | + | chr1_2:19142009-19142028 | None:intergenic | 20.0% |
!!! | GTATAAAATTATTTTGGAAG+GGG | + | chr1_2:19142125-19142144 | None:intergenic | 20.0% |
!!! | CAATATTTTAAGTTACATGT+TGG | + | chr1_2:19142393-19142412 | None:intergenic | 20.0% |
!! | AATGTATATATATCTGATCT+TGG | + | chr1_2:19142639-19142658 | None:intergenic | 20.0% |
!! | TTGAAAAGTAAACTCTTATT+AGG | - | chr1_2:19142785-19142804 | Msa0061130:five_prime_UTR | 20.0% |
!!! | TGATATTCTAAAGATATTTC+AGG | + | chr1_2:19142813-19142832 | None:intergenic | 20.0% |
! | TCTTTGTTAAACCAAACAAA+AGG | + | chr1_2:19138688-19138707 | None:intergenic | 25.0% |
!!! | TTTGAGCTTTAATTTTGGTA+TGG | - | chr1_2:19138889-19138908 | Msa0061130:three_prime_UTR | 25.0% |
!!! | TTTAATTTTGGTATGGTTTG+TGG | - | chr1_2:19138896-19138915 | Msa0061130:three_prime_UTR | 25.0% |
!!! | TGATTTTTCTGAAGTTGTTT+TGG | - | chr1_2:19138962-19138981 | Msa0061130:three_prime_UTR | 25.0% |
!! | AATTATTAAAGGGTGTAGTA+TGG | - | chr1_2:19139144-19139163 | Msa0061130:exon | 25.0% |
!!! | TAAATTTGGTTTTAATCCTC+CGG | - | chr1_2:19139169-19139188 | Msa0061130:CDS | 25.0% |
! | TTATGTTAATGATTCCTTTG+TGG | - | chr1_2:19139484-19139503 | Msa0061130:intron | 25.0% |
! | AAAAACAGAAATTGAGAGAA+AGG | + | chr1_2:19139657-19139676 | None:intergenic | 25.0% |
! | TAAATGGTAAGAACAAACAA+TGG | + | chr1_2:19139996-19140015 | None:intergenic | 25.0% |
! | AAATCAATCCAAGTAGAATA+GGG | + | chr1_2:19140512-19140531 | None:intergenic | 25.0% |
! | TAAATCAATCCAAGTAGAAT+AGG | + | chr1_2:19140513-19140532 | None:intergenic | 25.0% |
! | TTGTCATAAACTAACTCATT+AGG | - | chr1_2:19140634-19140653 | Msa0061130:intron | 25.0% |
!! | TTAAGTTGTTTATCCAAACA+AGG | - | chr1_2:19140726-19140745 | Msa0061130:intron | 25.0% |
! | GTATGATTTCCTTTATACTT+GGG | + | chr1_2:19140752-19140771 | None:intergenic | 25.0% |
! | TGTATGATTTCCTTTATACT+TGG | + | chr1_2:19140753-19140772 | None:intergenic | 25.0% |
!!! | AAAGATGATAACTTGTTGTA+TGG | + | chr1_2:19141522-19141541 | None:intergenic | 25.0% |
! | GCCTAAAAAATCTTTATAAG+TGG | - | chr1_2:19141631-19141650 | Msa0061130:intron | 25.0% |
!!! | CCCACTTATAAAGATTTTTT+AGG | + | chr1_2:19141635-19141654 | None:intergenic | 25.0% |
! | TGAAAAGGTCTTTATAAAGT+GGG | - | chr1_2:19141940-19141959 | Msa0061130:CDS | 25.0% |
!!! | CATCATACCAATTATTTTAG+AGG | + | chr1_2:19142075-19142094 | None:intergenic | 25.0% |
! | AAATAATTGGTATGATGTGT+TGG | - | chr1_2:19142078-19142097 | Msa0061130:intron | 25.0% |
! | CATATGTATGTTTGATACAT+AGG | - | chr1_2:19142463-19142482 | Msa0061130:intron | 25.0% |
!!! | TTCCCTTAAATAATTTGTTG+TGG | - | chr1_2:19142493-19142512 | Msa0061130:intron | 25.0% |
!!! | TCCCTTAAATAATTTGTTGT+GGG | - | chr1_2:19142494-19142513 | Msa0061130:intron | 25.0% |
! | TGTCAGATTTAGTTACATAA+CGG | + | chr1_2:19142586-19142605 | None:intergenic | 25.0% |
! | ATTTAAAGAAAATAGGGATG+TGG | - | chr1_2:19142716-19142735 | Msa0061130:five_prime_UTR | 25.0% |
TAATTCAAACCAAACCAAAC+TGG | - | chr1_2:19138725-19138744 | Msa0061130:three_prime_UTR | 30.0% | |
AATTCAAACCAAACCAAACT+GGG | - | chr1_2:19138726-19138745 | Msa0061130:three_prime_UTR | 30.0% | |
TTCTCGGTTTCTTCAAATTA+TGG | - | chr1_2:19138760-19138779 | Msa0061130:three_prime_UTR | 30.0% | |
AATGAAGGGTCAAAAAATTC+AGG | - | chr1_2:19138833-19138852 | Msa0061130:three_prime_UTR | 30.0% | |
ATATAAGTATCTGTGTTGTG+AGG | + | chr1_2:19139040-19139059 | None:intergenic | 30.0% | |
TATTACTACACCCTTCAATA+TGG | + | chr1_2:19139112-19139131 | None:intergenic | 30.0% | |
GGTGTAGTATGGTTTAAATT+TGG | - | chr1_2:19139155-19139174 | Msa0061130:CDS | 30.0% | |
! | TTTTAATCCTCCGGTTTATA+AGG | - | chr1_2:19139178-19139197 | Msa0061130:CDS | 30.0% |
TTGGTAAATTAGAGTTTGGT+CGG | - | chr1_2:19139210-19139229 | Msa0061130:CDS | 30.0% | |
ATTAAGAACTTGAGTTCGTT+GGG | - | chr1_2:19139299-19139318 | Msa0061130:intron | 30.0% | |
! | TCGTCTTCAGAAACTTTTAA+AGG | + | chr1_2:19139588-19139607 | None:intergenic | 30.0% |
! | AAAAGTTTCTGAAGACGATA+AGG | - | chr1_2:19139590-19139609 | Msa0061130:intron | 30.0% |
AAGGCTAAAATGATATCTTC+TGG | - | chr1_2:19139609-19139628 | Msa0061130:intron | 30.0% | |
!! | GTGTTTGAAAGAGTTCTAAA+TGG | + | chr1_2:19140012-19140031 | None:intergenic | 30.0% |
AAATTCACATTGTGTTGTAC+AGG | + | chr1_2:19140074-19140093 | None:intergenic | 30.0% | |
! | AGAAAGTGAATTTGCTTGAT+TGG | + | chr1_2:19140135-19140154 | None:intergenic | 30.0% |
!!! | ACAAGATGATTTTTTAGGAG+CGG | + | chr1_2:19140167-19140186 | None:intergenic | 30.0% |
! | ACTTTTGGTCAGAATATGAA+CGG | - | chr1_2:19140188-19140207 | Msa0061130:intron | 30.0% |
GCATTGAACTAAAATTACCA+TGG | + | chr1_2:19140308-19140327 | None:intergenic | 30.0% | |
ATATATTCCCCTATTCTACT+TGG | - | chr1_2:19140501-19140520 | Msa0061130:CDS | 30.0% | |
AATCAATCCAAGTAGAATAG+GGG | + | chr1_2:19140511-19140530 | None:intergenic | 30.0% | |
AATAACCTGAAAACAGCTTA+TGG | + | chr1_2:19140616-19140635 | None:intergenic | 30.0% | |
AGGTTTGATCAATTGTATTC+AGG | - | chr1_2:19140921-19140940 | Msa0061130:intron | 30.0% | |
GTATGTGAAGAAACAGATAA+AGG | + | chr1_2:19141105-19141124 | None:intergenic | 30.0% | |
! | TTATCTGTTTCTTCACATAC+TGG | - | chr1_2:19141105-19141124 | Msa0061130:intron | 30.0% |
TTATACTGTTACATACCTGA+TGG | + | chr1_2:19141261-19141280 | None:intergenic | 30.0% | |
GAATAACTCCATACTACAAA+AGG | + | chr1_2:19141356-19141375 | None:intergenic | 30.0% | |
GAAAGGTTAGATCTAATACA+CGG | - | chr1_2:19141471-19141490 | Msa0061130:intron | 30.0% | |
AAAGGTTAGATCTAATACAC+GGG | - | chr1_2:19141472-19141491 | Msa0061130:intron | 30.0% | |
!! | GATAACTTGTTGTATGGAAA+AGG | + | chr1_2:19141516-19141535 | None:intergenic | 30.0% |
GACCATCTTATAATTTGAAG+TGG | + | chr1_2:19141703-19141722 | None:intergenic | 30.0% | |
! | ACCTATAGAGACTTTTGAAT+GGG | + | chr1_2:19141732-19141751 | None:intergenic | 30.0% |
ATTCAAAAGTCTCTATAGGT+GGG | - | chr1_2:19141732-19141751 | Msa0061130:intron | 30.0% | |
GGTCAACACAAATTATAAGA+TGG | - | chr1_2:19141798-19141817 | Msa0061130:intron | 30.0% | |
GTCTATATGACATCTGATTT+GGG | + | chr1_2:19141920-19141939 | None:intergenic | 30.0% | |
AGTCTATATGACATCTGATT+TGG | + | chr1_2:19141921-19141940 | None:intergenic | 30.0% | |
AGATGTCATATAGACTGAAA+AGG | - | chr1_2:19141925-19141944 | Msa0061130:CDS | 30.0% | |
CTGAAAAGGTCTTTATAAAG+TGG | - | chr1_2:19141939-19141958 | Msa0061130:CDS | 30.0% | |
!! | TCGTTTGCCTCTAAAATAAT+TGG | - | chr1_2:19142065-19142084 | Msa0061130:intron | 30.0% |
! | TTATGTGTTTCTGTCAATAC+AGG | - | chr1_2:19142186-19142205 | Msa0061130:intron | 30.0% |
! | TATGTGTTTCTGTCAATACA+GGG | - | chr1_2:19142187-19142206 | Msa0061130:intron | 30.0% |
GATTTCTTGTTGAGGTTATA+TGG | + | chr1_2:19142227-19142246 | None:intergenic | 30.0% | |
ATGTTAGCACCTATTGAATT+CGG | + | chr1_2:19142266-19142285 | None:intergenic | 30.0% | |
ATACATATGAATCTCAGCAT+AGG | + | chr1_2:19142452-19142471 | None:intergenic | 30.0% | |
TGTATGTTTGATACATAGGT+AGG | - | chr1_2:19142467-19142486 | Msa0061130:intron | 30.0% | |
CCCCACAACAAATTATTTAA+GGG | + | chr1_2:19142498-19142517 | None:intergenic | 30.0% | |
!! | CCCTTAAATAATTTGTTGTG+GGG | - | chr1_2:19142495-19142514 | Msa0061130:intron | 30.0% |
!! | CCTTAAATAATTTGTTGTGG+GGG | - | chr1_2:19142496-19142515 | Msa0061130:intron | 30.0% |
!! | CTTAAATAATTTGTTGTGGG+GGG | - | chr1_2:19142497-19142516 | Msa0061130:intron | 30.0% |
CTTACCTTATATTAAGTGGT+TGG | - | chr1_2:19142521-19142540 | Msa0061130:intron | 30.0% | |
GAATCCAACCACTTAATATA+AGG | + | chr1_2:19142528-19142547 | None:intergenic | 30.0% | |
AAAAGTAGGATATCTCTGTT+AGG | - | chr1_2:19142675-19142694 | Msa0061130:CDS | 30.0% | |
GCAAGCTATGTTCTTCATAT+TGG | + | chr1_2:19138661-19138680 | None:intergenic | 35.0% | |
!! | AGCTTGCTTTTCCTTTTGTT+TGG | - | chr1_2:19138674-19138693 | Msa0061130:three_prime_UTR | 35.0% |
AATGAAAACCCAGTTTGGTT+TGG | + | chr1_2:19138737-19138756 | None:intergenic | 35.0% | |
! | AAACCAAACTGGGTTTTCAT+TGG | - | chr1_2:19138736-19138755 | Msa0061130:three_prime_UTR | 35.0% |
AAACCAATGAAAACCCAGTT+TGG | + | chr1_2:19138742-19138761 | None:intergenic | 35.0% | |
TCACCTGAGATTAACAATGA+AGG | - | chr1_2:19138818-19138837 | Msa0061130:three_prime_UTR | 35.0% | |
CACCTGAGATTAACAATGAA+GGG | - | chr1_2:19138819-19138838 | Msa0061130:three_prime_UTR | 35.0% | |
TGTTTCCTTGTCCATATTGA+AGG | - | chr1_2:19139098-19139117 | Msa0061130:three_prime_UTR | 35.0% | |
GTTTCCTTGTCCATATTGAA+GGG | - | chr1_2:19139099-19139118 | Msa0061130:three_prime_UTR | 35.0% | |
AGCCTTGGTAAATTAGAGTT+TGG | - | chr1_2:19139206-19139225 | Msa0061130:CDS | 35.0% | |
GACCAAACTCTAATTTACCA+AGG | + | chr1_2:19139211-19139230 | None:intergenic | 35.0% | |
TAAATTAGAGTTTGGTCGGA+AGG | - | chr1_2:19139214-19139233 | Msa0061130:CDS | 35.0% | |
TTTGGTCGGAAGGTAAATAA+AGG | - | chr1_2:19139224-19139243 | Msa0061130:CDS | 35.0% | |
CTCAAGTTCTTAATGAGCTT+CGG | + | chr1_2:19139293-19139312 | None:intergenic | 35.0% | |
CATTAAGAACTTGAGTTCGT+TGG | - | chr1_2:19139298-19139317 | Msa0061130:intron | 35.0% | |
TTAAGAACTTGAGTTCGTTG+GGG | - | chr1_2:19139300-19139319 | Msa0061130:intron | 35.0% | |
CGAATGTTTCAGCAGTAAAA+TGG | - | chr1_2:19139523-19139542 | Msa0061130:intron | 35.0% | |
!! | GATATCTTCTGGTTTCATAC+AGG | - | chr1_2:19139620-19139639 | Msa0061130:intron | 35.0% |
AGGACAACATTCAGTTAATC+AGG | - | chr1_2:19139697-19139716 | Msa0061130:intron | 35.0% | |
! | TTTTCAGTGCAATCTGCTTA+CGG | - | chr1_2:19139807-19139826 | Msa0061130:intron | 35.0% |
! | TCGGATCCGAACATAATTTT+AGG | - | chr1_2:19139883-19139902 | Msa0061130:intron | 35.0% |
AACAAACAATGGAAGGAAGT+GGG | + | chr1_2:19139985-19140004 | None:intergenic | 35.0% | |
TGGTAAGAACAAACAATGGA+AGG | + | chr1_2:19139992-19140011 | None:intergenic | 35.0% | |
TAGAACTCTTTCAAACACGA+TGG | - | chr1_2:19140014-19140033 | Msa0061130:CDS | 35.0% | |
! | GAATTTGCTTGATTGGAAAC+TGG | + | chr1_2:19140128-19140147 | None:intergenic | 35.0% |
TCAAGCAAATTCACTTTCTG+CGG | - | chr1_2:19140136-19140155 | Msa0061130:intron | 35.0% | |
CAATGCTTGAGATGTTTCTT+AGG | - | chr1_2:19140322-19140341 | Msa0061130:CDS | 35.0% | |
! | GAGATGTTTCTTAGGAGTTT+TGG | - | chr1_2:19140330-19140349 | Msa0061130:CDS | 35.0% |
CCATAAAACATGGTAAGTTG+AGG | + | chr1_2:19140426-19140445 | None:intergenic | 35.0% | |
! | CCTCAACTTACCATGTTTTA+TGG | - | chr1_2:19140423-19140442 | Msa0061130:CDS | 35.0% |
! | CAACTTACCATGTTTTATGG+CGG | - | chr1_2:19140426-19140445 | Msa0061130:CDS | 35.0% |
TGAGAGAAAAATACCTTCTC+AGG | + | chr1_2:19140480-19140499 | None:intergenic | 35.0% | |
AGTGCTTATGATAGTAGACA+AGG | + | chr1_2:19140541-19140560 | None:intergenic | 35.0% | |
! | AATGAGAGTATGAGACTGTT+TGG | - | chr1_2:19140561-19140580 | Msa0061130:intron | 35.0% |
AAGTAGCAGTGATGAGTTTA+TGG | - | chr1_2:19141149-19141168 | Msa0061130:intron | 35.0% | |
CTAGTTCAACCTTACAAAAC+CGG | + | chr1_2:19141679-19141698 | None:intergenic | 35.0% | |
GGCCACTTCAAATTATAAGA+TGG | - | chr1_2:19141698-19141717 | Msa0061130:intron | 35.0% | |
! | CACCTATAGAGACTTTTGAA+TGG | + | chr1_2:19141733-19141752 | None:intergenic | 35.0% |
CATTCAAAAGTCTCTATAGG+TGG | - | chr1_2:19141731-19141750 | Msa0061130:intron | 35.0% | |
AGTGCCTATCCAAAATTTGT+TGG | - | chr1_2:19141829-19141848 | Msa0061130:intron | 35.0% | |
! | GTGCCTATCCAAAATTTGTT+GGG | - | chr1_2:19141830-19141849 | Msa0061130:intron | 35.0% |
CTAGAGTGTGATCCAATAAA+GGG | + | chr1_2:19141859-19141878 | None:intergenic | 35.0% | |
! | TCTAGAGTGTGATCCAATAA+AGG | + | chr1_2:19141860-19141879 | None:intergenic | 35.0% |
AATTGGTATGATGTGTTGGA+AGG | - | chr1_2:19142082-19142101 | Msa0061130:intron | 35.0% | |
TAACCTCAACAAGAAATCTG+AGG | - | chr1_2:19142229-19142248 | Msa0061130:intron | 35.0% | |
GAGTTACTCATTGTTATCCT+TGG | + | chr1_2:19142328-19142347 | None:intergenic | 35.0% | |
GAGTAACTCCTTCTTATAGA+AGG | - | chr1_2:19142339-19142358 | Msa0061130:intron | 35.0% | |
TGTAGTCTCCTTCTATAAGA+AGG | + | chr1_2:19142350-19142369 | None:intergenic | 35.0% | |
TAGAAGGAGACTACATAAGA+TGG | - | chr1_2:19142355-19142374 | Msa0061130:intron | 35.0% | |
!! | CTCAGCATAGGTTTTAATCA+TGG | + | chr1_2:19142440-19142459 | None:intergenic | 35.0% |
CCCCCACAACAAATTATTTA+AGG | + | chr1_2:19142499-19142518 | None:intergenic | 35.0% | |
GGGTCTTACCTTATATTAAG+TGG | - | chr1_2:19142517-19142536 | Msa0061130:intron | 35.0% | |
CTATGCTAATGCTATACTGT+TGG | + | chr1_2:19142562-19142581 | None:intergenic | 35.0% | |
CTCTGTTAGGAGGATATATT+TGG | - | chr1_2:19142688-19142707 | Msa0061130:exon | 35.0% | |
TTGAAACTTACCTCATTGCT+TGG | - | chr1_2:19142752-19142771 | Msa0061130:five_prime_UTR | 35.0% | |
GCTATGTTCTTCATATTGGC+TGG | + | chr1_2:19138657-19138676 | None:intergenic | 40.0% | |
!!! | CTGGGTTTTCATTGGTTTCT+CGG | - | chr1_2:19138744-19138763 | Msa0061130:three_prime_UTR | 40.0% |
GACCCTTCATTGTTAATCTC+AGG | + | chr1_2:19138824-19138843 | None:intergenic | 40.0% | |
TACACCCTTCAATATGGACA+AGG | + | chr1_2:19139106-19139125 | None:intergenic | 40.0% | |
ATCCTCCGGTTTATAAGGAA+AGG | - | chr1_2:19139183-19139202 | Msa0061130:CDS | 40.0% | |
AGGCTCCTTTCCTTATAAAC+CGG | + | chr1_2:19139191-19139210 | None:intergenic | 40.0% | |
GTTTATAAGGAAAGGAGCCT+TGG | - | chr1_2:19139191-19139210 | Msa0061130:CDS | 40.0% | |
CGGAAGGTAAATAAAGGACT+CGG | - | chr1_2:19139230-19139249 | Msa0061130:CDS | 40.0% | |
GGAAGGTAAATAAAGGACTC+GGG | - | chr1_2:19139231-19139250 | Msa0061130:CDS | 40.0% | |
TAAGAACTTGAGTTCGTTGG+GGG | - | chr1_2:19139301-19139320 | Msa0061130:intron | 40.0% | |
!! | ATTGGTTTGGCTAAGGGTTA+AGG | - | chr1_2:19139337-19139356 | Msa0061130:intron | 40.0% |
GTTAAGGAGTAAGAGGACTT+GGG | - | chr1_2:19139353-19139372 | Msa0061130:intron | 40.0% | |
! | AGCATTTTTCTCGTTCACTG+TGG | + | chr1_2:19139385-19139404 | None:intergenic | 40.0% |
ATTCCTTTGTGGCTATGTGT+AGG | - | chr1_2:19139495-19139514 | Msa0061130:intron | 40.0% | |
AAACCTACACATAGCCACAA+AGG | + | chr1_2:19139501-19139520 | None:intergenic | 40.0% | |
GCAGAGACTTTGTTCAAGAA+GGG | + | chr1_2:19139549-19139568 | None:intergenic | 40.0% | |
AGCAGAGACTTTGTTCAAGA+AGG | + | chr1_2:19139550-19139569 | None:intergenic | 40.0% | |
ATTCACATTTAGAGGGTCGT+TGG | - | chr1_2:19139755-19139774 | Msa0061130:intron | 40.0% | |
GAACAAACAATGGAAGGAAG+TGG | + | chr1_2:19139986-19140005 | None:intergenic | 40.0% | |
TCTTTCAAACACGATGGACA+AGG | - | chr1_2:19140020-19140039 | Msa0061130:CDS | 40.0% | |
AATGCGAAGCAATCACTACT+TGG | - | chr1_2:19140215-19140234 | Msa0061130:intron | 40.0% | |
CAATGATATCACTCCTGAGA+AGG | - | chr1_2:19140464-19140483 | Msa0061130:CDS | 40.0% | |
TTTGGAGAGCTTATCGAATC+AGG | - | chr1_2:19140579-19140598 | Msa0061130:intron | 40.0% | |
!! | CTTTATACTTGGGCCTTGTT+TGG | + | chr1_2:19140742-19140761 | None:intergenic | 40.0% |
CAAACAAGGCCCAAGTATAA+AGG | - | chr1_2:19140740-19140759 | Msa0061130:intron | 40.0% | |
CTTATCTGCAGCTTCAAACA+GGG | - | chr1_2:19140975-19140994 | Msa0061130:intron | 40.0% | |
AAATTCGCATCAGGTGATGA+TGG | - | chr1_2:19141027-19141046 | Msa0061130:CDS | 40.0% | |
! | ATGTCTACAGGTGGACTTAT+AGG | + | chr1_2:19141057-19141076 | None:intergenic | 40.0% |
ATGGCTGCTAAAACATCTAG+AGG | - | chr1_2:19141168-19141187 | Msa0061130:intron | 40.0% | |
!! | GTGGTTGCATTGACTACTTT+GGG | + | chr1_2:19141231-19141250 | None:intergenic | 40.0% |
TTACATACCTGATGGAACCA+TGG | + | chr1_2:19141253-19141272 | None:intergenic | 40.0% | |
! | GGATGCATCCTTTTGTAGTA+TGG | - | chr1_2:19141345-19141364 | Msa0061130:CDS | 40.0% |
! | ATTTTATGCAGCTATACCGC+AGG | - | chr1_2:19141407-19141426 | Msa0061130:CDS | 40.0% |
!!! | AGCATCATTGGCTCGATTTT+TGG | - | chr1_2:19141437-19141456 | Msa0061130:CDS | 40.0% |
ATATCACTCACCTTACAAGC+CGG | - | chr1_2:19141657-19141676 | Msa0061130:intron | 40.0% | |
!! | CGGTTTTGTAAGGTTGAACT+AGG | - | chr1_2:19141677-19141696 | Msa0061130:intron | 40.0% |
GCCCATTCAAAAGTCTCTAT+AGG | - | chr1_2:19141728-19141747 | Msa0061130:intron | 40.0% | |
GCATACATCACCTTACAAGT+CGG | - | chr1_2:19141757-19141776 | Msa0061130:intron | 40.0% | |
! | TCGCCCAACAAATTTTGGAT+AGG | + | chr1_2:19141836-19141855 | None:intergenic | 40.0% |
CACTCTAGATGTCAAGTTCA+TGG | - | chr1_2:19141871-19141890 | Msa0061130:CDS | 40.0% | |
!! | ACCTAACAAGCCAGTTTTGT+GGG | - | chr1_2:19141971-19141990 | Msa0061130:intron | 40.0% |
!! | AGTTTTGTGGGGTTGAGTTT+GGG | - | chr1_2:19141983-19142002 | Msa0061130:intron | 40.0% |
TATGATGTGTTGGAAGGAAG+AGG | - | chr1_2:19142088-19142107 | Msa0061130:intron | 40.0% | |
CATCCTCAGATTTCTTGTTG+AGG | + | chr1_2:19142235-19142254 | None:intergenic | 40.0% | |
GCACAAATGCCGAATTCAAT+AGG | - | chr1_2:19142254-19142273 | Msa0061130:intron | 40.0% | |
CACTAGTACTGCTAATATGC+CGG | - | chr1_2:19142295-19142314 | Msa0061130:intron | 40.0% | |
!! | TGTTATCCTTGGTTTGCTAC+CGG | + | chr1_2:19142317-19142336 | None:intergenic | 40.0% |
AGTAGGATATCTCTGTTAGG+AGG | - | chr1_2:19142678-19142697 | Msa0061130:CDS | 40.0% | |
AGAAAATAGGGATGTGGTTG+AGG | - | chr1_2:19142722-19142741 | Msa0061130:five_prime_UTR | 40.0% | |
GAAAATAGGGATGTGGTTGA+GGG | - | chr1_2:19142723-19142742 | Msa0061130:five_prime_UTR | 40.0% | |
AAACTTACCTCATTGCTTGG+TGG | - | chr1_2:19142755-19142774 | Msa0061130:five_prime_UTR | 40.0% | |
ACTAAAACCACCAAGCAATG+AGG | + | chr1_2:19142765-19142784 | None:intergenic | 40.0% | |
CTCCTTTCCTTATAAACCGG+AGG | + | chr1_2:19139188-19139207 | None:intergenic | 45.0% | |
AAGGACTCGGGTTCGAAATT+AGG | - | chr1_2:19139243-19139262 | Msa0061130:CDS | 45.0% | |
CGGTTAAGCTCGAATTGATC+AGG | + | chr1_2:19139273-19139292 | None:intergenic | 45.0% | |
AAGAACTTGAGTTCGTTGGG+GGG | - | chr1_2:19139302-19139321 | Msa0061130:intron | 45.0% | |
! | GTTGAGTAGCTCGATTGGTT+TGG | - | chr1_2:19139324-19139343 | Msa0061130:intron | 45.0% |
!! | TAGCTCGATTGGTTTGGCTA+AGG | - | chr1_2:19139330-19139349 | Msa0061130:intron | 45.0% |
!! | AGCTCGATTGGTTTGGCTAA+GGG | - | chr1_2:19139331-19139350 | Msa0061130:intron | 45.0% |
GCTAAGGGTTAAGGAGTAAG+AGG | - | chr1_2:19139346-19139365 | Msa0061130:intron | 45.0% | |
GGTTAAGGAGTAAGAGGACT+TGG | - | chr1_2:19139352-19139371 | Msa0061130:intron | 45.0% | |
TTCAAACACGATGGACAAGG+TGG | - | chr1_2:19140023-19140042 | Msa0061130:CDS | 45.0% | |
!! | ACTGAATGAGGTGCTGTAAG+CGG | + | chr1_2:19140248-19140267 | None:intergenic | 45.0% |
ACGATCGGAAGAACTGAATG+AGG | + | chr1_2:19140260-19140279 | None:intergenic | 45.0% | |
CATTCAGTTCTTCCGATCGT+TGG | - | chr1_2:19140260-19140279 | Msa0061130:CDS | 45.0% | |
!! | TTGCTGGTTTGGTTGAACCA+TGG | - | chr1_2:19140288-19140307 | Msa0061130:CDS | 45.0% |
! | AACATGGTAAGTTGAGGAGC+AGG | + | chr1_2:19140420-19140439 | None:intergenic | 45.0% |
CACAGTACCGCCATAAAACA+TGG | + | chr1_2:19140436-19140455 | None:intergenic | 45.0% | |
!! | CACGTCCATAAGCTGTTTTC+AGG | - | chr1_2:19140608-19140627 | Msa0061130:intron | 45.0% |
ACTTCCAGCCAACAACATGA+TGG | + | chr1_2:19140953-19140972 | None:intergenic | 45.0% | |
! | ATCATGTTGTTGGCTGGAAG+TGG | - | chr1_2:19140952-19140971 | Msa0061130:intron | 45.0% |
GCTTATCTGCAGCTTCAAAC+AGG | - | chr1_2:19140974-19140993 | Msa0061130:intron | 45.0% | |
! | TCTAGCTCGAAATTCGCATC+AGG | - | chr1_2:19141018-19141037 | Msa0061130:CDS | 45.0% |
GGACTTGAAATACCAGAGCA+GGG | + | chr1_2:19141084-19141103 | None:intergenic | 45.0% | |
AGGACTTGAAATACCAGAGC+AGG | + | chr1_2:19141085-19141104 | None:intergenic | 45.0% | |
AAGCAGATGTGGTAGGAGTA+GGG | + | chr1_2:19141194-19141213 | None:intergenic | 45.0% | |
AGTTTGCAAGCAGATGTGGT+AGG | + | chr1_2:19141201-19141220 | None:intergenic | 45.0% | |
! | CACTAGTTTGCAAGCAGATG+TGG | + | chr1_2:19141205-19141224 | None:intergenic | 45.0% |
!! | GGTGGTTGCATTGACTACTT+TGG | + | chr1_2:19141232-19141251 | None:intergenic | 45.0% |
AGTAGTCAATGCAACCACCA+TGG | - | chr1_2:19141233-19141252 | Msa0061130:CDS | 45.0% | |
ATCGAGCCAATGATGCTTTG+CGG | + | chr1_2:19141434-19141453 | None:intergenic | 45.0% | |
!! | TCGATTTTTGGAGAAGCGCA+AGG | - | chr1_2:19141449-19141468 | Msa0061130:intron | 45.0% |
!! | TTTTGGAGAAGCGCAAGGAA+AGG | - | chr1_2:19141454-19141473 | Msa0061130:intron | 45.0% |
!! | CCTTACAAAACCGGCTTGTA+AGG | + | chr1_2:19141670-19141689 | None:intergenic | 45.0% |
!! | CCTTACAAGCCGGTTTTGTA+AGG | - | chr1_2:19141667-19141686 | Msa0061130:intron | 45.0% |
CAAAAGTCTCTATAGGTGGG+AGG | - | chr1_2:19141735-19141754 | Msa0061130:intron | 45.0% | |
! | ACCTTACAAGTCGGCTTTGT+AGG | - | chr1_2:19141766-19141785 | Msa0061130:intron | 45.0% |
! | CCTTACAAGTCGGCTTTGTA+GGG | - | chr1_2:19141767-19141786 | Msa0061130:intron | 45.0% |
! | AAGGGTCGCCCAACAAATTT+TGG | + | chr1_2:19141841-19141860 | None:intergenic | 45.0% |
TTTGTTGGGCGACCCTTTAT+TGG | - | chr1_2:19141844-19141863 | Msa0061130:CDS | 45.0% | |
TCAAGTTCATGGTGTGACGA+GGG | - | chr1_2:19141882-19141901 | Msa0061130:CDS | 45.0% | |
! | CACCTAACAAGCCAGTTTTG+TGG | - | chr1_2:19141970-19141989 | Msa0061130:intron | 45.0% |
!! | CCTAACAAGCCAGTTTTGTG+GGG | - | chr1_2:19141972-19141991 | Msa0061130:intron | 45.0% |
CAAACTCAACCCCACAAAAC+TGG | + | chr1_2:19141984-19142003 | None:intergenic | 45.0% | |
!! | CAGTTTTGTGGGGTTGAGTT+TGG | - | chr1_2:19141982-19142001 | Msa0061130:intron | 45.0% |
ATTAGCAGTACTAGTGGTCG+CGG | + | chr1_2:19142291-19142310 | None:intergenic | 45.0% | |
CGGCATATTAGCAGTACTAG+TGG | + | chr1_2:19142297-19142316 | None:intergenic | 45.0% | |
AATATGCCGGTAGCAAACCA+AGG | - | chr1_2:19142308-19142327 | Msa0061130:intron | 45.0% | |
GCGAAGCAATCACTACTTGG+TGG | - | chr1_2:19140218-19140237 | Msa0061130:CDS | 50.0% | |
CCAGCAACAGTACCAACGAT+CGG | + | chr1_2:19140275-19140294 | None:intergenic | 50.0% | |
! | CGTTGGTACTGTTGCTGGTT+TGG | - | chr1_2:19140277-19140296 | Msa0061130:CDS | 50.0% |
GGCACAAGCCATCATGTTGT+TGG | - | chr1_2:19140942-19140961 | Msa0061130:intron | 50.0% | |
CAAGCCATCATGTTGTTGGC+TGG | - | chr1_2:19140946-19140965 | Msa0061130:intron | 50.0% | |
GAGCTAGATGCCTGAACTTC+AGG | + | chr1_2:19141006-19141025 | None:intergenic | 50.0% | |
CTTGAAATACCAGAGCAGGG+TGG | + | chr1_2:19141081-19141100 | None:intergenic | 50.0% | |
CAAGCAGATGTGGTAGGAGT+AGG | + | chr1_2:19141195-19141214 | None:intergenic | 50.0% | |
CATACCTGATGGAACCATGG+TGG | + | chr1_2:19141250-19141269 | None:intergenic | 50.0% | |
TCGAGCCAATGATGCTTTGC+GGG | + | chr1_2:19141433-19141452 | None:intergenic | 50.0% | |
!! | CCCTACAAAGCCGACTTGTA+AGG | + | chr1_2:19141770-19141789 | None:intergenic | 50.0% |
! | CGGCTTTGTAGGGTTGAGTT+AGG | - | chr1_2:19141777-19141796 | Msa0061130:intron | 50.0% |
GTCAAGTTCATGGTGTGACG+AGG | - | chr1_2:19141881-19141900 | Msa0061130:CDS | 50.0% | |
!! | CCCCACAAAACTGGCTTGTT+AGG | + | chr1_2:19141975-19141994 | None:intergenic | 50.0% |
CCGATCGTTGGTACTGTTGC+TGG | - | chr1_2:19140272-19140291 | Msa0061130:CDS | 55.0% | |
AGTTGAGGAGCAGGTGCAGA+TGG | + | chr1_2:19140411-19140430 | None:intergenic | 55.0% | |
CAGGGCTCAACCTGAAGTTC+AGG | - | chr1_2:19140993-19141012 | Msa0061130:intron | 55.0% | |
CAGGGTGGTATGTCTACAGG+TGG | + | chr1_2:19141066-19141085 | None:intergenic | 55.0% | |
GAGCAGGGTGGTATGTCTAC+AGG | + | chr1_2:19141069-19141088 | None:intergenic | 55.0% | |
GTAGACATACCACCCTGCTC+TGG | - | chr1_2:19141069-19141088 | Msa0061130:intron | 55.0% | |
TCACATACTGGTCCACAGCC+AGG | - | chr1_2:19141117-19141136 | Msa0061130:intron | 55.0% | |
CACATACTGGTCCACAGCCA+GGG | - | chr1_2:19141118-19141137 | Msa0061130:intron | 55.0% | |
GCAACCACCATGGTTCCATC+AGG | - | chr1_2:19141243-19141262 | Msa0061130:CDS | 55.0% | |
AATGATGCTTTGCGGGCCTG+CGG | + | chr1_2:19141426-19141445 | None:intergenic | 55.0% | |
GGGGGGTTGAGTAGCTCGAT+TGG | - | chr1_2:19139319-19139338 | Msa0061130:intron | 60.0% | |
TCGTTGGACTCGAGCGTGAG+TGG | - | chr1_2:19139771-19139790 | Msa0061130:intron | 60.0% | |
GGACTCGAGCGTGAGTGGAT+AGG | - | chr1_2:19139776-19139795 | Msa0061130:intron | 60.0% | |
! | CTGCTACTTGAGCCACTCCC+TGG | + | chr1_2:19141138-19141157 | None:intergenic | 60.0% |
! | GCAGGCCCGCAAAGCATCAT+TGG | - | chr1_2:19141425-19141444 | Msa0061130:CDS | 60.0% |
ACTGGTCCACAGCCAGGGAG+TGG | - | chr1_2:19141123-19141142 | Msa0061130:intron | 65.0% | |
CTTGAGCCACTCCCTGGCTG+TGG | + | chr1_2:19141132-19141151 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 19138638 | 19142843 | 19138638 | ID=Msa0061130;Name=Msa0061130 |
chr1_2 | mRNA | 19138638 | 19142843 | 19138638 | ID=Msa0061130-mRNA-1;Parent=Msa0061130;Name=Msa0061130-mRNA-1;_AED=0.07;_eAED=0.07;_QI=141|1|1|1|1|1|7|509|361 |
chr1_2 | exon | 19138638 | 19139273 | 19138638 | ID=Msa0061130-mRNA-1:exon:7427;Parent=Msa0061130-mRNA-1 |
chr1_2 | exon | 19140006 | 19140063 | 19140006 | ID=Msa0061130-mRNA-1:exon:7426;Parent=Msa0061130-mRNA-1 |
chr1_2 | exon | 19140217 | 19140538 | 19140217 | ID=Msa0061130-mRNA-1:exon:7425;Parent=Msa0061130-mRNA-1 |
chr1_2 | exon | 19140996 | 19141080 | 19140996 | ID=Msa0061130-mRNA-1:exon:7424;Parent=Msa0061130-mRNA-1 |
chr1_2 | exon | 19141172 | 19141464 | 19141172 | ID=Msa0061130-mRNA-1:exon:7423;Parent=Msa0061130-mRNA-1 |
chr1_2 | exon | 19141840 | 19141964 | 19141840 | ID=Msa0061130-mRNA-1:exon:7422;Parent=Msa0061130-mRNA-1 |
chr1_2 | exon | 19142627 | 19142843 | 19142627 | ID=Msa0061130-mRNA-1:exon:7421;Parent=Msa0061130-mRNA-1 |
chr1_2 | five_prime_UTR | 19142703 | 19142843 | 19142703 | ID=Msa0061130-mRNA-1:five_prime_utr;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19142627 | 19142702 | 19142627 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19141840 | 19141964 | 19141840 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19141172 | 19141464 | 19141172 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19140996 | 19141080 | 19140996 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19140217 | 19140538 | 19140217 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19140006 | 19140063 | 19140006 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | CDS | 19139147 | 19139273 | 19139147 | ID=Msa0061130-mRNA-1:cds;Parent=Msa0061130-mRNA-1 |
chr1_2 | three_prime_UTR | 19138638 | 19139146 | 19138638 | ID=Msa0061130-mRNA-1:three_prime_utr;Parent=Msa0061130-mRNA-1 |
Gene Sequence |
Protein sequence |