AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0052180


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052180 MtrunA17_Chr1g0152811 95.685 394 11 1 1 394 38 425 0.0 782
Msa0052180 MtrunA17_Chr1g0152831 85.714 392 52 1 1 392 34 421 0.0 707
Msa0052180 MtrunA17_Chr3g0134561 70.127 395 112 2 1 394 1 390 0.0 584
Msa0052180 MtrunA17_Chr3g0134571 72.703 370 101 0 25 394 9 378 0.0 573
Msa0052180 MtrunA17_Chr3g0082001 68.354 395 119 2 1 394 1 390 0.0 564
Msa0052180 MtrunA17_Chr3g0134551 68.354 395 119 2 1 394 1 390 0.0 563
Msa0052180 MtrunA17_Chr1g0152791 90.547 201 19 0 194 394 7 207 6.88e-138 392
Msa0052180 MtrunA17_Chr4g0036961 42.973 370 201 6 32 394 6 372 1.89e-96 293
Msa0052180 MtrunA17_Chr4g0068121 41.463 369 206 7 33 394 7 372 1.39e-92 283
Msa0052180 MtrunA17_Chr4g0068141 42.049 371 201 8 33 394 7 372 2.34e-92 282
Msa0052180 MtrunA17_Chr1g0152801 90.400 125 12 0 73 197 10 134 2.04e-79 240
Msa0052180 MtrunA17_Chr3g0104611 38.058 381 218 10 25 394 4 377 4.44e-77 243
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0052180 AT4G24220.1 68.274 394 119 2 1 394 1 388 0.0 554
Msa0052180 AT4G24220.2 68.274 394 118 2 1 394 1 387 0.0 553
Msa0052180 AT5G58750.1 36.483 381 214 15 31 394 16 385 1.01e-72 232
Msa0052180 AT5G58750.2 36.483 381 214 15 31 394 8 377 1.20e-72 232

Find 108 sgRNAs with CRISPR-Local

Find 266 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATAGCTGAACAACATATT+TGG 0.126207 1_2:+6373058 Msa0052180:CDS
TGGCAAAGATTCAGAGTATT+TGG 0.175584 1_2:-6372539 None:intergenic
AGCATGAGGGTCTTCCTTTA+AGG 0.227760 1_2:+6372980 Msa0052180:CDS
CGGTTTGAGATCGATGATTA+TGG 0.235119 1_2:+6373174 Msa0052180:CDS
TTTGAGCCAGGAAACCTTAA+AGG 0.244750 1_2:-6372994 None:intergenic
CTCTTGTGTGTAATAGAAAT+TGG 0.263026 1_2:-6372672 None:intergenic
AATAGCTGAACAACATATTT+GGG 0.263385 1_2:+6373059 Msa0052180:CDS
GGTCTTCCTTTAAGGTTTCC+TGG 0.265961 1_2:+6372988 Msa0052180:CDS
CAAAATGTAGCATTGATTAT+AGG 0.272352 1_2:+6372221 Msa0052180:CDS
GGTGGTCCATGGAAGGTTTA+TGG 0.276380 1_2:+6372302 Msa0052180:CDS
AACATGGATTCCAGGGATTT+AGG 0.280913 1_2:+6373379 Msa0052180:CDS
AATCGACCACACCCTATCTT+TGG 0.298584 1_2:+6372895 Msa0052180:CDS
CTATAATCAATGCTACATTT+TGG 0.303787 1_2:-6372220 None:intergenic
TAAGGTGAAAATCCAAAGAT+AGG 0.338018 1_2:-6372907 None:intergenic
CTAAGAATTCGTTCATTAGT+TGG 0.343826 1_2:+6373406 Msa0052180:CDS
AAGGCTTCATTCTTTGCATT+AGG 0.350949 1_2:-6373093 None:intergenic
AGCTAAGGAACATGGATTCC+AGG 0.382372 1_2:+6373371 Msa0052180:CDS
AATATGTGTCACATCAGTTA+AGG 0.393193 1_2:-6372426 None:intergenic
TCAGCGTTCCACGTTGGTTG+TGG 0.408075 1_2:-6372338 None:intergenic
GGCAAAGATTCAGAGTATTT+GGG 0.411148 1_2:-6372538 None:intergenic
ATCGGAGATGATGAAGGATA+AGG 0.418093 1_2:+6373224 Msa0052180:CDS
AAGTTAACGGTTCAATGTTA+AGG 0.426025 1_2:+6372495 Msa0052180:CDS
AGTGCTTAGTTCCTGTTTGA+AGG 0.429893 1_2:-6372568 None:intergenic
ATCTCCAACTTCTTCAAGCT+TGG 0.439774 1_2:-6373292 None:intergenic
GATCGATGATTATGGATTTG+AGG 0.440058 1_2:+6373182 Msa0052180:CDS
TCGGAGATGATGAAGGATAA+GGG 0.442157 1_2:+6373225 Msa0052180:CDS
ATCGCCATTGGTGCAGTTGA+AGG 0.452749 1_2:-6373112 None:intergenic
TTTGAGACTGGAGGGTGTGT+TGG 0.453672 1_2:+6373335 Msa0052180:CDS
CACACCAAGCTTGAAGAAGT+TGG 0.454920 1_2:+6373288 Msa0052180:CDS
TTGAGGAGGGGTCGGAGTTG+AGG 0.458175 1_2:+6373199 Msa0052180:CDS
TATTCAAGTGGAAACATTTG+TGG 0.460085 1_2:+6373136 Msa0052180:CDS
TTGAGCCTCTGTGGGCATGC+TGG 0.461766 1_2:-6372465 None:intergenic
CGATCGTTTCGAAGGATCCT+AGG 0.464183 1_2:-6372592 None:intergenic
GGGGTCGGAGTTGAGGTTAT+CGG 0.468894 1_2:+6373206 Msa0052180:CDS
AGCTTGAAGAAGTTGGAGAT+TGG 0.472593 1_2:+6373295 Msa0052180:CDS
TTAAGGTTTCCTGGCTCAAA+AGG 0.474340 1_2:+6372997 Msa0052180:CDS
TGTGCAGATTACAGAATTCA+AGG 0.476950 1_2:+6372181 Msa0052180:intron
GCTCAAAACTGCGAAGTTAA+CGG 0.480117 1_2:+6372482 Msa0052180:CDS
TACAGCATGATGAACGTCAT+TGG 0.481948 1_2:+6372928 Msa0052180:CDS
TGCTGGTTAGCTAAAGCATC+TGG 0.483308 1_2:+6372055 Msa0052180:CDS
TGCCACGTGTCCCTTCAAAC+AGG 0.484063 1_2:+6372557 Msa0052180:CDS
CTTCCTCTTGACGACACACC+AGG 0.485639 1_2:+6372281 Msa0052180:CDS
TATAGGCGTGACGGGAATTG+TGG 0.488302 1_2:+6372238 Msa0052180:CDS
GATCTTACCGATCGTTTCGA+AGG 0.490896 1_2:-6372600 None:intergenic
TCTTAGAATTCCTAAATCCC+TGG 0.490914 1_2:-6373389 None:intergenic
CCACTTGAATACATCGCCAT+TGG 0.492618 1_2:-6373124 None:intergenic
ATATGTGTCACATCAGTTAA+GGG 0.499720 1_2:-6372425 None:intergenic
TCCTGGCTCAAAAGGTGCAT+GGG 0.501130 1_2:+6373005 Msa0052180:CDS
TTGAAGAAGTTGGAGATTGG+TGG 0.501232 1_2:+6373298 Msa0052180:CDS
GATTCAGAGTATTTGGGATG+AGG 0.505727 1_2:-6372532 None:intergenic
CGCCGCAATTTGCAAGCATG+AGG 0.506185 1_2:+6372966 Msa0052180:CDS
ATGACGTTCATCATGCTGTA+AGG 0.522524 1_2:-6372925 None:intergenic
ATAGGCGTGACGGGAATTGT+GGG 0.523966 1_2:+6372239 Msa0052180:CDS
GCCACGCCATAAACCTTCCA+TGG 0.524352 1_2:-6372308 None:intergenic
GTGCTTAGTTCCTGTTTGAA+GGG 0.526554 1_2:-6372567 None:intergenic
CGAAACGATCGGTAAGATCA+AGG 0.531559 1_2:+6372604 Msa0052180:CDS
CGTGGCACATCCTCCGTGAA+GGG 0.534644 1_2:-6372638 None:intergenic
ACGACACACCAGGTGGTCCA+TGG 0.534646 1_2:+6372291 Msa0052180:CDS
ATTCAGAGTATTTGGGATGA+GGG 0.534772 1_2:-6372531 None:intergenic
TCTTGTGTGTAATAGAAATT+GGG 0.536136 1_2:-6372671 None:intergenic
CGTTCCACGTTGGTTGTGGA+CGG 0.541898 1_2:-6372334 None:intergenic
TAAACCTTCCATGGACCACC+TGG 0.546760 1_2:-6372299 None:intergenic
GATGATTATGGATTTGAGGA+GGG 0.546835 1_2:+6373186 Msa0052180:CDS
GAAGCCTTCAACTGCACCAA+TGG 0.549227 1_2:+6373108 Msa0052180:CDS
CGATGATTATGGATTTGAGG+AGG 0.550813 1_2:+6373185 Msa0052180:CDS
TTCCTGGCTCAAAAGGTGCA+TGG 0.551639 1_2:+6373004 Msa0052180:CDS
TTAGCTAAAGCATCTGGCAC+TGG 0.552955 1_2:+6372061 Msa0052180:CDS
TTATGGATTTGAGGAGGGGT+CGG 0.555462 1_2:+6373191 Msa0052180:CDS
GCGTGGCACATCCTCCGTGA+AGG 0.559630 1_2:-6372639 None:intergenic
GCATTGATTATAGGCGTGAC+GGG 0.559853 1_2:+6372230 Msa0052180:CDS
GAAGGATAAGGGTGGTGTGT+GGG 0.559921 1_2:+6373236 Msa0052180:CDS
GAGGTTATCGGAGATGATGA+AGG 0.563587 1_2:+6373218 Msa0052180:CDS
GTGTGTGGGAAGAGATTGTG+AGG 0.564316 1_2:+6373250 Msa0052180:CDS
ATGAACAAAGCTAAGGAACA+TGG 0.565654 1_2:+6373363 Msa0052180:CDS
TGGCACATCCTCCGTGAAGG+GGG 0.571299 1_2:-6372636 None:intergenic
ACCCTCATGCTTGCAAATTG+CGG 0.571724 1_2:-6372968 None:intergenic
AAGGTGAAAATCCAAAGATA+GGG 0.571865 1_2:-6372906 None:intergenic
GCTAAGGAACATGGATTCCA+GGG 0.579431 1_2:+6373372 Msa0052180:CDS
TGTGGAAGGTGTTAGCAGAA+CGG 0.582640 1_2:+6373154 Msa0052180:CDS
CAAGTGGAAACATTTGTGGA+AGG 0.585306 1_2:+6373140 Msa0052180:CDS
AGCATTGATTATAGGCGTGA+CGG 0.590164 1_2:+6372229 Msa0052180:CDS
ACAACATATTTGGGGTGCAG+TGG 0.593718 1_2:+6373068 Msa0052180:CDS
CAATTTCTATTACACACAAG+AGG 0.594811 1_2:+6372673 Msa0052180:CDS
CCACCTGGTGTGTCGTCAAG+AGG 0.596172 1_2:-6372284 None:intergenic
CTAGGATCCTTCGAAACGAT+CGG 0.596222 1_2:+6372593 Msa0052180:CDS
TTCCTGTTTGAAGGGACACG+TGG 0.599850 1_2:-6372559 None:intergenic
GGATTCTATGAACAAAGCTA+AGG 0.603190 1_2:+6373356 Msa0052180:CDS
CAAGAGGAAGAATCTCTGCT+AGG 0.603639 1_2:-6372268 None:intergenic
AGAGGATATCTTGCTAGAAG+AGG 0.608504 1_2:+6372691 Msa0052180:CDS
ATAGCTGAACAACATATTTG+GGG 0.609952 1_2:+6373060 Msa0052180:CDS
GAAAATCCAAAGATAGGGTG+TGG 0.610721 1_2:-6372901 None:intergenic
GTGGCACATCCTCCGTGAAG+GGG 0.611842 1_2:-6372637 None:intergenic
TATTTGGGATGAGGGCTCGA+AGG 0.617902 1_2:-6372523 None:intergenic
TGAAGGATAAGGGTGGTGTG+TGG 0.621492 1_2:+6373235 Msa0052180:CDS
GCCGCAATTTGCAAGCATGA+GGG 0.625863 1_2:+6372967 Msa0052180:CDS
ATGATTATGGATTTGAGGAG+GGG 0.626346 1_2:+6373187 Msa0052180:CDS
CACACCAGGTGGTCCATGGA+AGG 0.631164 1_2:+6372295 Msa0052180:CDS
CCAATGGCGATGTATTCAAG+TGG 0.636788 1_2:+6373124 Msa0052180:CDS
AATAGAAATTGGGTGTGACA+AGG 0.638766 1_2:-6372661 None:intergenic
TACTTATCAGCGTTCCACGT+TGG 0.638942 1_2:-6372344 None:intergenic
ACAGGAACTAAGCACTACCT+AGG 0.639304 1_2:+6372575 Msa0052180:CDS
AAATTGGGTGTGACAAGGCG+TGG 0.639832 1_2:-6372656 None:intergenic
TCCATGGAAGGTTTATGGCG+TGG 0.649148 1_2:+6372307 Msa0052180:CDS
CTCGCCGTCCACAACCAACG+TGG 0.681033 1_2:+6372330 Msa0052180:CDS
CCTCTTGACGACACACCAGG+TGG 0.689409 1_2:+6372284 Msa0052180:CDS
GAGATGATGAAGGATAAGGG+TGG 0.738948 1_2:+6373228 Msa0052180:CDS
TGTGTGGGAAGAGATTGTGA+GGG 0.742732 1_2:+6373251 Msa0052180:CDS
GTGGACCAGCATGCCCACAG+AGG 0.748657 1_2:+6372460 Msa0052180:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTGAAAATAAAAAATAAA+GGG - chr1_2:6372133-6372152 None:intergenic 10.0%
!! TAGTTGAAAATAAAAAATAA+AGG - chr1_2:6372134-6372153 None:intergenic 10.0%
!! AGTTGAAAATAAAAAATAAA+GGG - chr1_2:6372133-6372152 None:intergenic 10.0%
!! TAGTTGAAAATAAAAAATAA+AGG - chr1_2:6372134-6372153 None:intergenic 10.0%
!! TTGAAAATAAAAAATAAAGG+GGG - chr1_2:6372131-6372150 None:intergenic 15.0%
!! GTTGAAAATAAAAAATAAAG+GGG - chr1_2:6372132-6372151 None:intergenic 15.0%
!! TTGAAAATAAAAAATAAAGG+GGG - chr1_2:6372131-6372150 None:intergenic 15.0%
!! GTTGAAAATAAAAAATAAAG+GGG - chr1_2:6372132-6372151 None:intergenic 15.0%
!! AAATATCAATACATTTGTTC+AGG + chr1_2:6372840-6372859 Msa0052180:intron 20.0%
!! AAATATCAATACATTTGTTC+AGG + chr1_2:6372840-6372859 Msa0052180:intron 20.0%
! AAAATAAAAAATAAAGGGGG+AGG - chr1_2:6372128-6372147 None:intergenic 25.0%
!! CTATAATCAATGCTACATTT+TGG - chr1_2:6372223-6372242 None:intergenic 25.0%
!!! CAAAATGTAGCATTGATTAT+AGG + chr1_2:6372221-6372240 Msa0052180:CDS 25.0%
! TCTTGTGTGTAATAGAAATT+GGG - chr1_2:6372674-6372693 None:intergenic 25.0%
! TAATAGCTGAACAACATATT+TGG + chr1_2:6373058-6373077 Msa0052180:CDS 25.0%
! AATAGCTGAACAACATATTT+GGG + chr1_2:6373059-6373078 Msa0052180:CDS 25.0%
! AAAATAAAAAATAAAGGGGG+AGG - chr1_2:6372128-6372147 None:intergenic 25.0%
!! CTATAATCAATGCTACATTT+TGG - chr1_2:6372223-6372242 None:intergenic 25.0%
!!! CAAAATGTAGCATTGATTAT+AGG + chr1_2:6372221-6372240 Msa0052180:CDS 25.0%
! TCTTGTGTGTAATAGAAATT+GGG - chr1_2:6372674-6372693 None:intergenic 25.0%
! TAATAGCTGAACAACATATT+TGG + chr1_2:6373058-6373077 Msa0052180:CDS 25.0%
! AATAGCTGAACAACATATTT+GGG + chr1_2:6373059-6373078 Msa0052180:CDS 25.0%
ATATGTGTCACATCAGTTAA+GGG - chr1_2:6372428-6372447 None:intergenic 30.0%
AATATGTGTCACATCAGTTA+AGG - chr1_2:6372429-6372448 None:intergenic 30.0%
AAGTTAACGGTTCAATGTTA+AGG + chr1_2:6372495-6372514 Msa0052180:CDS 30.0%
CTCTTGTGTGTAATAGAAAT+TGG - chr1_2:6372675-6372694 None:intergenic 30.0%
CAATTTCTATTACACACAAG+AGG + chr1_2:6372673-6372692 Msa0052180:CDS 30.0%
TATCAATACATTTGTTCAGG+TGG + chr1_2:6372843-6372862 Msa0052180:intron 30.0%
ATCAATACATTTGTTCAGGT+GGG + chr1_2:6372844-6372863 Msa0052180:intron 30.0%
AAGGTGAAAATCCAAAGATA+GGG - chr1_2:6372909-6372928 None:intergenic 30.0%
TAAGGTGAAAATCCAAAGAT+AGG - chr1_2:6372910-6372929 None:intergenic 30.0%
ATAGCTGAACAACATATTTG+GGG + chr1_2:6373060-6373079 Msa0052180:CDS 30.0%
TATTCAAGTGGAAACATTTG+TGG + chr1_2:6373136-6373155 Msa0052180:CDS 30.0%
CTAAGAATTCGTTCATTAGT+TGG + chr1_2:6373406-6373425 Msa0052180:CDS 30.0%
ATATGTGTCACATCAGTTAA+GGG - chr1_2:6372428-6372447 None:intergenic 30.0%
AATATGTGTCACATCAGTTA+AGG - chr1_2:6372429-6372448 None:intergenic 30.0%
AAGTTAACGGTTCAATGTTA+AGG + chr1_2:6372495-6372514 Msa0052180:CDS 30.0%
CTCTTGTGTGTAATAGAAAT+TGG - chr1_2:6372675-6372694 None:intergenic 30.0%
CAATTTCTATTACACACAAG+AGG + chr1_2:6372673-6372692 Msa0052180:CDS 30.0%
TATCAATACATTTGTTCAGG+TGG + chr1_2:6372843-6372862 Msa0052180:intron 30.0%
ATCAATACATTTGTTCAGGT+GGG + chr1_2:6372844-6372863 Msa0052180:intron 30.0%
AAGGTGAAAATCCAAAGATA+GGG - chr1_2:6372909-6372928 None:intergenic 30.0%
TAAGGTGAAAATCCAAAGAT+AGG - chr1_2:6372910-6372929 None:intergenic 30.0%
ATAGCTGAACAACATATTTG+GGG + chr1_2:6373060-6373079 Msa0052180:CDS 30.0%
TATTCAAGTGGAAACATTTG+TGG + chr1_2:6373136-6373155 Msa0052180:CDS 30.0%
CTAAGAATTCGTTCATTAGT+TGG + chr1_2:6373406-6373425 Msa0052180:CDS 30.0%
TTGAATTCTGTAATCTGCAC+AGG - chr1_2:6372182-6372201 None:intergenic 35.0%
TGTGCAGATTACAGAATTCA+AGG + chr1_2:6372181-6372200 Msa0052180:intron 35.0%
! CACATATTTTCTATGTCTCG+TGG + chr1_2:6372441-6372460 Msa0052180:CDS 35.0%
! ATTCAGAGTATTTGGGATGA+GGG - chr1_2:6372534-6372553 None:intergenic 35.0%
! GGCAAAGATTCAGAGTATTT+GGG - chr1_2:6372541-6372560 None:intergenic 35.0%
! TGGCAAAGATTCAGAGTATT+TGG - chr1_2:6372542-6372561 None:intergenic 35.0%
AATAGAAATTGGGTGTGACA+AGG - chr1_2:6372664-6372683 None:intergenic 35.0%
GTAAGAAAAAAGGAACGACA+TGG + chr1_2:6372866-6372885 Msa0052180:CDS 35.0%
AAGGCTTCATTCTTTGCATT+AGG - chr1_2:6373096-6373115 None:intergenic 35.0%
GATCGATGATTATGGATTTG+AGG + chr1_2:6373182-6373201 Msa0052180:CDS 35.0%
GATGATTATGGATTTGAGGA+GGG + chr1_2:6373186-6373205 Msa0052180:CDS 35.0%
ATGATTATGGATTTGAGGAG+GGG + chr1_2:6373187-6373206 Msa0052180:CDS 35.0%
!!! TGCAGATTTTAGTTTGAGAC+TGG + chr1_2:6373323-6373342 Msa0052180:CDS 35.0%
!!! AGATTTTAGTTTGAGACTGG+AGG + chr1_2:6373326-6373345 Msa0052180:CDS 35.0%
!!! GATTTTAGTTTGAGACTGGA+GGG + chr1_2:6373327-6373346 Msa0052180:CDS 35.0%
GGATTCTATGAACAAAGCTA+AGG + chr1_2:6373356-6373375 Msa0052180:CDS 35.0%
ATGAACAAAGCTAAGGAACA+TGG + chr1_2:6373363-6373382 Msa0052180:CDS 35.0%
TCTTAGAATTCCTAAATCCC+TGG - chr1_2:6373392-6373411 None:intergenic 35.0%
TTGAATTCTGTAATCTGCAC+AGG - chr1_2:6372182-6372201 None:intergenic 35.0%
TGTGCAGATTACAGAATTCA+AGG + chr1_2:6372181-6372200 Msa0052180:intron 35.0%
! CACATATTTTCTATGTCTCG+TGG + chr1_2:6372441-6372460 Msa0052180:CDS 35.0%
! ATTCAGAGTATTTGGGATGA+GGG - chr1_2:6372534-6372553 None:intergenic 35.0%
! GGCAAAGATTCAGAGTATTT+GGG - chr1_2:6372541-6372560 None:intergenic 35.0%
! TGGCAAAGATTCAGAGTATT+TGG - chr1_2:6372542-6372561 None:intergenic 35.0%
AATAGAAATTGGGTGTGACA+AGG - chr1_2:6372664-6372683 None:intergenic 35.0%
GTAAGAAAAAAGGAACGACA+TGG + chr1_2:6372866-6372885 Msa0052180:CDS 35.0%
AAGGCTTCATTCTTTGCATT+AGG - chr1_2:6373096-6373115 None:intergenic 35.0%
GATCGATGATTATGGATTTG+AGG + chr1_2:6373182-6373201 Msa0052180:CDS 35.0%
GATGATTATGGATTTGAGGA+GGG + chr1_2:6373186-6373205 Msa0052180:CDS 35.0%
ATGATTATGGATTTGAGGAG+GGG + chr1_2:6373187-6373206 Msa0052180:CDS 35.0%
!!! TGCAGATTTTAGTTTGAGAC+TGG + chr1_2:6373323-6373342 Msa0052180:CDS 35.0%
!!! AGATTTTAGTTTGAGACTGG+AGG + chr1_2:6373326-6373345 Msa0052180:CDS 35.0%
!!! GATTTTAGTTTGAGACTGGA+GGG + chr1_2:6373327-6373346 Msa0052180:CDS 35.0%
GGATTCTATGAACAAAGCTA+AGG + chr1_2:6373356-6373375 Msa0052180:CDS 35.0%
ATGAACAAAGCTAAGGAACA+TGG + chr1_2:6373363-6373382 Msa0052180:CDS 35.0%
TCTTAGAATTCCTAAATCCC+TGG - chr1_2:6373392-6373411 None:intergenic 35.0%
!! GCTACATTTTGGAAGCTTTG+TGG - chr1_2:6372212-6372231 None:intergenic 40.0%
!! AGCATTGATTATAGGCGTGA+CGG + chr1_2:6372229-6372248 Msa0052180:CDS 40.0%
! GCTTCAATTCGACGTCTTTT+TGG - chr1_2:6372400-6372419 None:intergenic 40.0%
GCTCAAAACTGCGAAGTTAA+CGG + chr1_2:6372482-6372501 Msa0052180:CDS 40.0%
! GATTCAGAGTATTTGGGATG+AGG - chr1_2:6372535-6372554 None:intergenic 40.0%
GTGCTTAGTTCCTGTTTGAA+GGG - chr1_2:6372570-6372589 None:intergenic 40.0%
AGTGCTTAGTTCCTGTTTGA+AGG - chr1_2:6372571-6372590 None:intergenic 40.0%
AGAGGATATCTTGCTAGAAG+AGG + chr1_2:6372691-6372710 Msa0052180:CDS 40.0%
GATATCTTGCTAGAAGAGGT+TGG + chr1_2:6372695-6372714 Msa0052180:intron 40.0%
GTTCAGGTGGGTAAGAAAAA+AGG + chr1_2:6372856-6372875 Msa0052180:intron 40.0%
GAAAATCCAAAGATAGGGTG+TGG - chr1_2:6372904-6372923 None:intergenic 40.0%
ATGACGTTCATCATGCTGTA+AGG - chr1_2:6372928-6372947 None:intergenic 40.0%
TACAGCATGATGAACGTCAT+TGG + chr1_2:6372928-6372947 Msa0052180:CDS 40.0%
TTTGAGCCAGGAAACCTTAA+AGG - chr1_2:6372997-6373016 None:intergenic 40.0%
TTAAGGTTTCCTGGCTCAAA+AGG + chr1_2:6372997-6373016 Msa0052180:CDS 40.0%
CAAGTGGAAACATTTGTGGA+AGG + chr1_2:6373140-6373159 Msa0052180:CDS 40.0%
! CGGTTTGAGATCGATGATTA+TGG + chr1_2:6373174-6373193 Msa0052180:CDS 40.0%
CGATGATTATGGATTTGAGG+AGG + chr1_2:6373185-6373204 Msa0052180:CDS 40.0%
ATCGGAGATGATGAAGGATA+AGG + chr1_2:6373224-6373243 Msa0052180:CDS 40.0%
TCGGAGATGATGAAGGATAA+GGG + chr1_2:6373225-6373244 Msa0052180:CDS 40.0%
ATCTCCAACTTCTTCAAGCT+TGG - chr1_2:6373295-6373314 None:intergenic 40.0%
AGCTTGAAGAAGTTGGAGAT+TGG + chr1_2:6373295-6373314 Msa0052180:CDS 40.0%
TTGAAGAAGTTGGAGATTGG+TGG + chr1_2:6373298-6373317 Msa0052180:CDS 40.0%
AACATGGATTCCAGGGATTT+AGG + chr1_2:6373379-6373398 Msa0052180:CDS 40.0%
!! GCTACATTTTGGAAGCTTTG+TGG - chr1_2:6372212-6372231 None:intergenic 40.0%
!! AGCATTGATTATAGGCGTGA+CGG + chr1_2:6372229-6372248 Msa0052180:CDS 40.0%
! GCTTCAATTCGACGTCTTTT+TGG - chr1_2:6372400-6372419 None:intergenic 40.0%
GCTCAAAACTGCGAAGTTAA+CGG + chr1_2:6372482-6372501 Msa0052180:CDS 40.0%
! GATTCAGAGTATTTGGGATG+AGG - chr1_2:6372535-6372554 None:intergenic 40.0%
GTGCTTAGTTCCTGTTTGAA+GGG - chr1_2:6372570-6372589 None:intergenic 40.0%
AGTGCTTAGTTCCTGTTTGA+AGG - chr1_2:6372571-6372590 None:intergenic 40.0%
AGAGGATATCTTGCTAGAAG+AGG + chr1_2:6372691-6372710 Msa0052180:CDS 40.0%
GATATCTTGCTAGAAGAGGT+TGG + chr1_2:6372695-6372714 Msa0052180:intron 40.0%
GTTCAGGTGGGTAAGAAAAA+AGG + chr1_2:6372856-6372875 Msa0052180:intron 40.0%
GAAAATCCAAAGATAGGGTG+TGG - chr1_2:6372904-6372923 None:intergenic 40.0%
ATGACGTTCATCATGCTGTA+AGG - chr1_2:6372928-6372947 None:intergenic 40.0%
TACAGCATGATGAACGTCAT+TGG + chr1_2:6372928-6372947 Msa0052180:CDS 40.0%
TTTGAGCCAGGAAACCTTAA+AGG - chr1_2:6372997-6373016 None:intergenic 40.0%
TTAAGGTTTCCTGGCTCAAA+AGG + chr1_2:6372997-6373016 Msa0052180:CDS 40.0%
CAAGTGGAAACATTTGTGGA+AGG + chr1_2:6373140-6373159 Msa0052180:CDS 40.0%
! CGGTTTGAGATCGATGATTA+TGG + chr1_2:6373174-6373193 Msa0052180:CDS 40.0%
CGATGATTATGGATTTGAGG+AGG + chr1_2:6373185-6373204 Msa0052180:CDS 40.0%
ATCGGAGATGATGAAGGATA+AGG + chr1_2:6373224-6373243 Msa0052180:CDS 40.0%
TCGGAGATGATGAAGGATAA+GGG + chr1_2:6373225-6373244 Msa0052180:CDS 40.0%
ATCTCCAACTTCTTCAAGCT+TGG - chr1_2:6373295-6373314 None:intergenic 40.0%
AGCTTGAAGAAGTTGGAGAT+TGG + chr1_2:6373295-6373314 Msa0052180:CDS 40.0%
TTGAAGAAGTTGGAGATTGG+TGG + chr1_2:6373298-6373317 Msa0052180:CDS 40.0%
AACATGGATTCCAGGGATTT+AGG + chr1_2:6373379-6373398 Msa0052180:CDS 40.0%
! TGCTGGTTAGCTAAAGCATC+TGG + chr1_2:6372055-6372074 Msa0052180:CDS 45.0%
! TTAGCTAAAGCATCTGGCAC+TGG + chr1_2:6372061-6372080 Msa0052180:CDS 45.0%
!! GCATTGATTATAGGCGTGAC+GGG + chr1_2:6372230-6372249 Msa0052180:CDS 45.0%
CAAGAGGAAGAATCTCTGCT+AGG - chr1_2:6372271-6372290 None:intergenic 45.0%
TACTTATCAGCGTTCCACGT+TGG - chr1_2:6372347-6372366 None:intergenic 45.0%
ACAGGAACTAAGCACTACCT+AGG + chr1_2:6372575-6372594 Msa0052180:CDS 45.0%
CTAGGATCCTTCGAAACGAT+CGG + chr1_2:6372593-6372612 Msa0052180:CDS 45.0%
GATCTTACCGATCGTTTCGA+AGG - chr1_2:6372603-6372622 None:intergenic 45.0%
CGAAACGATCGGTAAGATCA+AGG + chr1_2:6372604-6372623 Msa0052180:CDS 45.0%
AATCGACCACACCCTATCTT+TGG + chr1_2:6372895-6372914 Msa0052180:CDS 45.0%
ACCCTCATGCTTGCAAATTG+CGG - chr1_2:6372971-6372990 None:intergenic 45.0%
AGCATGAGGGTCTTCCTTTA+AGG + chr1_2:6372980-6372999 Msa0052180:CDS 45.0%
!! GGTCTTCCTTTAAGGTTTCC+TGG + chr1_2:6372988-6373007 Msa0052180:CDS 45.0%
! ACAACATATTTGGGGTGCAG+TGG + chr1_2:6373068-6373087 Msa0052180:CDS 45.0%
CCACTTGAATACATCGCCAT+TGG - chr1_2:6373127-6373146 None:intergenic 45.0%
CCAATGGCGATGTATTCAAG+TGG + chr1_2:6373124-6373143 Msa0052180:CDS 45.0%
!! TGTGGAAGGTGTTAGCAGAA+CGG + chr1_2:6373154-6373173 Msa0052180:CDS 45.0%
TTATGGATTTGAGGAGGGGT+CGG + chr1_2:6373191-6373210 Msa0052180:CDS 45.0%
GAGGTTATCGGAGATGATGA+AGG + chr1_2:6373218-6373237 Msa0052180:CDS 45.0%
GAGATGATGAAGGATAAGGG+TGG + chr1_2:6373228-6373247 Msa0052180:CDS 45.0%
TGTGTGGGAAGAGATTGTGA+GGG + chr1_2:6373251-6373270 Msa0052180:CDS 45.0%
CACACCAAGCTTGAAGAAGT+TGG + chr1_2:6373288-6373307 Msa0052180:CDS 45.0%
AGCTAAGGAACATGGATTCC+AGG + chr1_2:6373371-6373390 Msa0052180:CDS 45.0%
GCTAAGGAACATGGATTCCA+GGG + chr1_2:6373372-6373391 Msa0052180:CDS 45.0%
! TGCTGGTTAGCTAAAGCATC+TGG + chr1_2:6372055-6372074 Msa0052180:CDS 45.0%
! TTAGCTAAAGCATCTGGCAC+TGG + chr1_2:6372061-6372080 Msa0052180:CDS 45.0%
!! GCATTGATTATAGGCGTGAC+GGG + chr1_2:6372230-6372249 Msa0052180:CDS 45.0%
CAAGAGGAAGAATCTCTGCT+AGG - chr1_2:6372271-6372290 None:intergenic 45.0%
TACTTATCAGCGTTCCACGT+TGG - chr1_2:6372347-6372366 None:intergenic 45.0%
ACAGGAACTAAGCACTACCT+AGG + chr1_2:6372575-6372594 Msa0052180:CDS 45.0%
CTAGGATCCTTCGAAACGAT+CGG + chr1_2:6372593-6372612 Msa0052180:CDS 45.0%
GATCTTACCGATCGTTTCGA+AGG - chr1_2:6372603-6372622 None:intergenic 45.0%
CGAAACGATCGGTAAGATCA+AGG + chr1_2:6372604-6372623 Msa0052180:CDS 45.0%
AATCGACCACACCCTATCTT+TGG + chr1_2:6372895-6372914 Msa0052180:CDS 45.0%
ACCCTCATGCTTGCAAATTG+CGG - chr1_2:6372971-6372990 None:intergenic 45.0%
AGCATGAGGGTCTTCCTTTA+AGG + chr1_2:6372980-6372999 Msa0052180:CDS 45.0%
!! GGTCTTCCTTTAAGGTTTCC+TGG + chr1_2:6372988-6373007 Msa0052180:CDS 45.0%
! ACAACATATTTGGGGTGCAG+TGG + chr1_2:6373068-6373087 Msa0052180:CDS 45.0%
CCACTTGAATACATCGCCAT+TGG - chr1_2:6373127-6373146 None:intergenic 45.0%
CCAATGGCGATGTATTCAAG+TGG + chr1_2:6373124-6373143 Msa0052180:CDS 45.0%
!! TGTGGAAGGTGTTAGCAGAA+CGG + chr1_2:6373154-6373173 Msa0052180:CDS 45.0%
TTATGGATTTGAGGAGGGGT+CGG + chr1_2:6373191-6373210 Msa0052180:CDS 45.0%
GAGGTTATCGGAGATGATGA+AGG + chr1_2:6373218-6373237 Msa0052180:CDS 45.0%
GAGATGATGAAGGATAAGGG+TGG + chr1_2:6373228-6373247 Msa0052180:CDS 45.0%
TGTGTGGGAAGAGATTGTGA+GGG + chr1_2:6373251-6373270 Msa0052180:CDS 45.0%
CACACCAAGCTTGAAGAAGT+TGG + chr1_2:6373288-6373307 Msa0052180:CDS 45.0%
AGCTAAGGAACATGGATTCC+AGG + chr1_2:6373371-6373390 Msa0052180:CDS 45.0%
GCTAAGGAACATGGATTCCA+GGG + chr1_2:6373372-6373391 Msa0052180:CDS 45.0%
! TATAGGCGTGACGGGAATTG+TGG + chr1_2:6372238-6372257 Msa0052180:CDS 50.0%
! ATAGGCGTGACGGGAATTGT+GGG + chr1_2:6372239-6372258 Msa0052180:CDS 50.0%
TAAACCTTCCATGGACCACC+TGG - chr1_2:6372302-6372321 None:intergenic 50.0%
GGTGGTCCATGGAAGGTTTA+TGG + chr1_2:6372302-6372321 Msa0052180:CDS 50.0%
TCCATGGAAGGTTTATGGCG+TGG + chr1_2:6372307-6372326 Msa0052180:CDS 50.0%
!!! TCGCAGTTTTGAGCCTCTGT+GGG - chr1_2:6372476-6372495 None:intergenic 50.0%
!!! TTCGCAGTTTTGAGCCTCTG+TGG - chr1_2:6372477-6372496 None:intergenic 50.0%
! TATTTGGGATGAGGGCTCGA+AGG - chr1_2:6372526-6372545 None:intergenic 50.0%
TTCCTGTTTGAAGGGACACG+TGG - chr1_2:6372562-6372581 None:intergenic 50.0%
CGATCGTTTCGAAGGATCCT+AGG - chr1_2:6372595-6372614 None:intergenic 50.0%
AAATTGGGTGTGACAAGGCG+TGG - chr1_2:6372659-6372678 None:intergenic 50.0%
GCCGCAATTTGCAAGCATGA+GGG + chr1_2:6372967-6372986 Msa0052180:CDS 50.0%
! TTCCTGGCTCAAAAGGTGCA+TGG + chr1_2:6373004-6373023 Msa0052180:CDS 50.0%
! TCCTGGCTCAAAAGGTGCAT+GGG + chr1_2:6373005-6373024 Msa0052180:CDS 50.0%
GAAGCCTTCAACTGCACCAA+TGG + chr1_2:6373108-6373127 Msa0052180:CDS 50.0%
ATCGCCATTGGTGCAGTTGA+AGG - chr1_2:6373115-6373134 None:intergenic 50.0%
TGAAGGATAAGGGTGGTGTG+TGG + chr1_2:6373235-6373254 Msa0052180:CDS 50.0%
GAAGGATAAGGGTGGTGTGT+GGG + chr1_2:6373236-6373255 Msa0052180:CDS 50.0%
GTGTGTGGGAAGAGATTGTG+AGG + chr1_2:6373250-6373269 Msa0052180:CDS 50.0%
! TTTGAGACTGGAGGGTGTGT+TGG + chr1_2:6373335-6373354 Msa0052180:CDS 50.0%
! TATAGGCGTGACGGGAATTG+TGG + chr1_2:6372238-6372257 Msa0052180:CDS 50.0%
! ATAGGCGTGACGGGAATTGT+GGG + chr1_2:6372239-6372258 Msa0052180:CDS 50.0%
TAAACCTTCCATGGACCACC+TGG - chr1_2:6372302-6372321 None:intergenic 50.0%
GGTGGTCCATGGAAGGTTTA+TGG + chr1_2:6372302-6372321 Msa0052180:CDS 50.0%
TCCATGGAAGGTTTATGGCG+TGG + chr1_2:6372307-6372326 Msa0052180:CDS 50.0%
!!! TCGCAGTTTTGAGCCTCTGT+GGG - chr1_2:6372476-6372495 None:intergenic 50.0%
!!! TTCGCAGTTTTGAGCCTCTG+TGG - chr1_2:6372477-6372496 None:intergenic 50.0%
! TATTTGGGATGAGGGCTCGA+AGG - chr1_2:6372526-6372545 None:intergenic 50.0%
TTCCTGTTTGAAGGGACACG+TGG - chr1_2:6372562-6372581 None:intergenic 50.0%
CGATCGTTTCGAAGGATCCT+AGG - chr1_2:6372595-6372614 None:intergenic 50.0%
AAATTGGGTGTGACAAGGCG+TGG - chr1_2:6372659-6372678 None:intergenic 50.0%
GCCGCAATTTGCAAGCATGA+GGG + chr1_2:6372967-6372986 Msa0052180:CDS 50.0%
! TTCCTGGCTCAAAAGGTGCA+TGG + chr1_2:6373004-6373023 Msa0052180:CDS 50.0%
! TCCTGGCTCAAAAGGTGCAT+GGG + chr1_2:6373005-6373024 Msa0052180:CDS 50.0%
GAAGCCTTCAACTGCACCAA+TGG + chr1_2:6373108-6373127 Msa0052180:CDS 50.0%
ATCGCCATTGGTGCAGTTGA+AGG - chr1_2:6373115-6373134 None:intergenic 50.0%
TGAAGGATAAGGGTGGTGTG+TGG + chr1_2:6373235-6373254 Msa0052180:CDS 50.0%
GAAGGATAAGGGTGGTGTGT+GGG + chr1_2:6373236-6373255 Msa0052180:CDS 50.0%
GTGTGTGGGAAGAGATTGTG+AGG + chr1_2:6373250-6373269 Msa0052180:CDS 50.0%
! TTTGAGACTGGAGGGTGTGT+TGG + chr1_2:6373335-6373354 Msa0052180:CDS 50.0%
CTTCCTCTTGACGACACACC+AGG + chr1_2:6372281-6372300 Msa0052180:CDS 55.0%
GCCACGCCATAAACCTTCCA+TGG - chr1_2:6372311-6372330 None:intergenic 55.0%
! CGTTCCACGTTGGTTGTGGA+CGG - chr1_2:6372337-6372356 None:intergenic 55.0%
! TCAGCGTTCCACGTTGGTTG+TGG - chr1_2:6372341-6372360 None:intergenic 55.0%
TGCCACGTGTCCCTTCAAAC+AGG + chr1_2:6372557-6372576 Msa0052180:CDS 55.0%
CGCCGCAATTTGCAAGCATG+AGG + chr1_2:6372966-6372985 Msa0052180:CDS 55.0%
! TCCCATGCACCTTTTGAGCC+AGG - chr1_2:6373009-6373028 None:intergenic 55.0%
GGGGTCGGAGTTGAGGTTAT+CGG + chr1_2:6373206-6373225 Msa0052180:CDS 55.0%
CTTCCTCTTGACGACACACC+AGG + chr1_2:6372281-6372300 Msa0052180:CDS 55.0%
GCCACGCCATAAACCTTCCA+TGG - chr1_2:6372311-6372330 None:intergenic 55.0%
! CGTTCCACGTTGGTTGTGGA+CGG - chr1_2:6372337-6372356 None:intergenic 55.0%
! TCAGCGTTCCACGTTGGTTG+TGG - chr1_2:6372341-6372360 None:intergenic 55.0%
TGCCACGTGTCCCTTCAAAC+AGG + chr1_2:6372557-6372576 Msa0052180:CDS 55.0%
CGCCGCAATTTGCAAGCATG+AGG + chr1_2:6372966-6372985 Msa0052180:CDS 55.0%
! TCCCATGCACCTTTTGAGCC+AGG - chr1_2:6373009-6373028 None:intergenic 55.0%
GGGGTCGGAGTTGAGGTTAT+CGG + chr1_2:6373206-6373225 Msa0052180:CDS 55.0%
CCACCTGGTGTGTCGTCAAG+AGG - chr1_2:6372287-6372306 None:intergenic 60.0%
CCTCTTGACGACACACCAGG+TGG + chr1_2:6372284-6372303 Msa0052180:CDS 60.0%
ACGACACACCAGGTGGTCCA+TGG + chr1_2:6372291-6372310 Msa0052180:CDS 60.0%
CACACCAGGTGGTCCATGGA+AGG + chr1_2:6372295-6372314 Msa0052180:CDS 60.0%
TTGAGCCTCTGTGGGCATGC+TGG - chr1_2:6372468-6372487 None:intergenic 60.0%
CTCCGTGAAGGGGGACTCAT+GGG - chr1_2:6372630-6372649 None:intergenic 60.0%
TGGCACATCCTCCGTGAAGG+GGG - chr1_2:6372639-6372658 None:intergenic 60.0%
GTGGCACATCCTCCGTGAAG+GGG - chr1_2:6372640-6372659 None:intergenic 60.0%
CGTGGCACATCCTCCGTGAA+GGG - chr1_2:6372641-6372660 None:intergenic 60.0%
TTGAGGAGGGGTCGGAGTTG+AGG + chr1_2:6373199-6373218 Msa0052180:CDS 60.0%
CCACCTGGTGTGTCGTCAAG+AGG - chr1_2:6372287-6372306 None:intergenic 60.0%
CCTCTTGACGACACACCAGG+TGG + chr1_2:6372284-6372303 Msa0052180:CDS 60.0%
ACGACACACCAGGTGGTCCA+TGG + chr1_2:6372291-6372310 Msa0052180:CDS 60.0%
CACACCAGGTGGTCCATGGA+AGG + chr1_2:6372295-6372314 Msa0052180:CDS 60.0%
TTGAGCCTCTGTGGGCATGC+TGG - chr1_2:6372468-6372487 None:intergenic 60.0%
CTCCGTGAAGGGGGACTCAT+GGG - chr1_2:6372630-6372649 None:intergenic 60.0%
TGGCACATCCTCCGTGAAGG+GGG - chr1_2:6372639-6372658 None:intergenic 60.0%
GTGGCACATCCTCCGTGAAG+GGG - chr1_2:6372640-6372659 None:intergenic 60.0%
CGTGGCACATCCTCCGTGAA+GGG - chr1_2:6372641-6372660 None:intergenic 60.0%
TTGAGGAGGGGTCGGAGTTG+AGG + chr1_2:6373199-6373218 Msa0052180:CDS 60.0%
CTCGCCGTCCACAACCAACG+TGG + chr1_2:6372330-6372349 Msa0052180:CDS 65.0%
GTGGACCAGCATGCCCACAG+AGG + chr1_2:6372460-6372479 Msa0052180:CDS 65.0%
GGCCCATGAGTCCCCCTTCA+CGG + chr1_2:6372625-6372644 Msa0052180:CDS 65.0%
CCTCCGTGAAGGGGGACTCA+TGG - chr1_2:6372631-6372650 None:intergenic 65.0%
CCATGAGTCCCCCTTCACGG+AGG + chr1_2:6372628-6372647 Msa0052180:CDS 65.0%
GCGTGGCACATCCTCCGTGA+AGG - chr1_2:6372642-6372661 None:intergenic 65.0%
CTCGCCGTCCACAACCAACG+TGG + chr1_2:6372330-6372349 Msa0052180:CDS 65.0%
GTGGACCAGCATGCCCACAG+AGG + chr1_2:6372460-6372479 Msa0052180:CDS 65.0%
GGCCCATGAGTCCCCCTTCA+CGG + chr1_2:6372625-6372644 Msa0052180:CDS 65.0%
CCTCCGTGAAGGGGGACTCA+TGG - chr1_2:6372631-6372650 None:intergenic 65.0%
CCATGAGTCCCCCTTCACGG+AGG + chr1_2:6372628-6372647 Msa0052180:CDS 65.0%
GCGTGGCACATCCTCCGTGA+AGG - chr1_2:6372642-6372661 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 6372049 6373464 6372049 ID=Msa0052180;Name=Msa0052180
chr1_2 mRNA 6372049 6373464 6372049 ID=Msa0052180-mRNA-1;Parent=Msa0052180;Name=Msa0052180-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|3|0|394
chr1_2 exon 6372049 6372105 6372049 ID=Msa0052180-mRNA-1:exon:2024;Parent=Msa0052180-mRNA-1
chr1_2 exon 6372188 6372712 6372188 ID=Msa0052180-mRNA-1:exon:2025;Parent=Msa0052180-mRNA-1
chr1_2 exon 6372862 6373464 6372862 ID=Msa0052180-mRNA-1:exon:2026;Parent=Msa0052180-mRNA-1
chr1_2 CDS 6372049 6372105 6372049 ID=Msa0052180-mRNA-1:cds;Parent=Msa0052180-mRNA-1
chr1_2 CDS 6372188 6372712 6372188 ID=Msa0052180-mRNA-1:cds;Parent=Msa0052180-mRNA-1
chr1_2 CDS 6372862 6373464 6372862 ID=Msa0052180-mRNA-1:cds;Parent=Msa0052180-mRNA-1
Gene Sequence

>Msa0052180

ATGAACTGCTGGTTAGCTAAAGCATCTGGCACTGGCAAAGCAAGTTATTTAAACATTATTACAGAATTCAAGGAAGCACCACAAAGCTTCCAAAATGTAGCATTGATTATAGGCGTGACGGGAATTGTGGGAAATAGCCTAGCAGAGATTCTTCCTCTTGACGACACACCAGGTGGTCCATGGAAGGTTTATGGCGTGGCTCGCCGTCCACAACCAACGTGGAACGCTGATAAGTATGTTCACTACATTCAATGCGATGTCTTCGACCAAAAAGACGTCGAATTGAAGCTCGCTCCCTTAACTGATGTGACACATATTTTCTATGTCTCGTGGACCAGCATGCCCACAGAGGCTCAAAACTGCGAAGTTAACGGTTCAATGTTAAGGAACGTCCTTCGAGCCCTCATCCCAAATACTCTGAATCTTTGCCACGTGTCCCTTCAAACAGGAACTAAGCACTACCTAGGATCCTTCGAAACGATCGGTAAGATCAAGGCCCATGAGTCCCCCTTCACGGAGGATGTGCCACGCCTTGTCACACCCAATTTCTATTACACACAAGAGGATATCTTGCTAGAAGAGGTGGGTAAGAAAAAAGGAACGACATGGTTCATTAATCGACCACACCCTATCTTTGGATTTTCACCTTACAGCATGATGAACGTCATTGGCACGCTTTGTGTTTACGCCGCAATTTGCAAGCATGAGGGTCTTCCTTTAAGGTTTCCTGGCTCAAAAGGTGCATGGGAGTGTTATTCATCAGCTTCAGATGCTAATTTAATAGCTGAACAACATATTTGGGGTGCAGTGGATCCTAATGCAAAGAATGAAGCCTTCAACTGCACCAATGGCGATGTATTCAAGTGGAAACATTTGTGGAAGGTGTTAGCAGAACGGTTTGAGATCGATGATTATGGATTTGAGGAGGGGTCGGAGTTGAGGTTATCGGAGATGATGAAGGATAAGGGTGGTGTGTGGGAAGAGATTGTGAGGGAGAATGAATTGTTGCACACCAAGCTTGAAGAAGTTGGAGATTGGTGGTTTGCAGATTTTAGTTTGAGACTGGAGGGTGTGTTGGATTCTATGAACAAAGCTAAGGAACATGGATTCCAGGGATTTAGGAATTCTAAGAATTCGTTCATTAGTTGGATTGACAAGACAAAAGCTTACAAGATTGTGCCATGA

Protein sequence

>Msa0052180

MNCWLAKASGTGKASYLNIITEFKEAPQSFQNVALIIGVTGIVGNSLAEILPLDDTPGGPWKVYGVARRPQPTWNADKYVHYIQCDVFDQKDVELKLAPLTDVTHIFYVSWTSMPTEAQNCEVNGSMLRNVLRALIPNTLNLCHVSLQTGTKHYLGSFETIGKIKAHESPFTEDVPRLVTPNFYYTQEDILLEEVGKKKGTTWFINRPHPIFGFSPYSMMNVIGTLCVYAAICKHEGLPLRFPGSKGAWECYSSASDANLIAEQHIWGAVDPNAKNEAFNCTNGDVFKWKHLWKVLAERFEIDDYGFEEGSELRLSEMMKDKGGVWEEIVRENELLHTKLEEVGDWWFADFSLRLEGVLDSMNKAKEHGFQGFRNSKNSFISWIDKTKAYKIVP*